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Fix more broken links
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cjmyers committed Mar 21, 2020
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2 changes: 1 addition & 1 deletion annotation.tex
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Expand Up @@ -16,7 +16,7 @@ \subsection{Annotation and Extension of SBOL}
\item Finally, just as custom objects can be embedded in an SBOL document, external documents can embed or refer to SBOL objects. Support for this last case is not explicitly provided in this specification. Rather, this case depends on the external non-SBOL system managing its relationship to SBOL and data serialized in RDF, and is included here for completeness.
\end{itemize}

Each \sbol{Identified} object MAY be annotated with application-specific properties, which MUST be labelled using RDF predicates outside of the SBOL namespace. Additionally, application-specific types may be used in conjunction with the SBOL data model. These application-specific types MUST have two \sbol{rdf:type} properties: one type outside of the SBOL namespace AND an additional SBOL type of either:
Each \sbol{Identified} object MAY be annotated with application-specific properties, which MUST be labelled using RDF predicates outside of the SBOL namespace. Additionally, application-specific types may be used in conjunction with the SBOL data model. These application-specific types MUST have two \external{rdf:type} properties: one type outside of the SBOL namespace AND an additional SBOL type of either:

\begin{itemize}
\item \sbol{TopLevel}, if the object is to be considered an SBOL top level (i.e., not owned by another object)
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4 changes: 2 additions & 2 deletions combinatorialDerivation.tex
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Expand Up @@ -20,8 +20,8 @@ \subsection{CombinatorialDerivation}

When a \sbol{Component} is derived in accordance with a \sbol{CombinatorialDerivation}, the \prov{wasDerivedFrom} property of the derived \sbol{Component} SHOULD refer to the \sbol{CombinatorialDerivation}. When multiple \sbol{Component} objects are derived in accordance with the same \sbol{CombinatorialDerivation}, they MAY be referred to by the \sbol{member} property of a \sbol{Collection}, in which case the \prov{wasDerivedFrom} property of the \sbol{Collection} SHOULD also refer to this \sbol{CombinatorialDerivation}.

If the \sbolmult{type:CD}{type} property of the template \sbol{Component} contains one or more URIs, then the \sbolmult{type:CD}{type} property of any derived \sbol{Component} SHOULD also contain those URIs.
The same holds true for the \sbolmult{role:CD}{role} properties of these \sbol{Component} objects.
If the \sbolmult{type:C}{type} property of the template \sbol{Component} contains one or more URIs, then the \sbolmult{type:C}{type} property of any derived \sbol{Component} SHOULD also contain those URIs.
The same holds true for the \sbolmult{role:C}{role} properties of these \sbol{Component} objects.

\subparagraph{The \sbolheading{hasVariableComponent} property}\label{sec:hasVariableComponent}

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4 changes: 2 additions & 2 deletions complementary_standards.tex
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Expand Up @@ -157,8 +157,8 @@ \subsubsection{Measure}
\subparagraph{The \sbolheading{hasUnit} property}\label{sec:hasUnit:Measure}
The \sbolmult{hasUnit:Measure}{hasUnit} property is REQUIRED and MUST contain a \sbol{URI} that refers to a \om{Unit}. The OM provides \sbol{URI}s for many existing instances of the \om{Unit} class for reference (for example, \url{http://www.ontology-of-units-of-measure.org/resource/om-2/gramPerLitre}).

\subparagraph{The \sbolheading{types} property}\label{sec:types:Measure}
The \sbolmult{types:Measure}{types} property is OPTIONAL and MAY contain a set of \sbol{URI}s. It is RECOMMENDED that one of these \sbol{URI}s identify a term from the Systems Biology Ontology (SBO) (\url{http://www.ebi.ac.uk/sbo/main/}). This \sbolmult{types:Measure}{types} property of the \om{Measure} class is not specified in the OM and is added by SBOL to describe different types of parameters (for example, rate of reaction is identified by the SBO term \url{http://identifiers.org/biomodels.sbo/SBO:0000612}).
\subparagraph{The \sbolheading{type} property}\label{sec:type:Measure}
The \sbolmult{type:Measure}{type} property is OPTIONAL and MAY contain a set of \sbol{URI}s. It is RECOMMENDED that one of these \sbol{URI}s identify a term from the Systems Biology Ontology (SBO) (\url{http://www.ebi.ac.uk/sbo/main/}). This \sbolmult{type:Measure}{type} property of the \om{Measure} class is not specified in the OM and is added by SBOL to describe different types of parameters (for example, rate of reaction is identified by the SBO term \url{http://identifiers.org/biomodels.sbo/SBO:0000612}).

\subsubsection{Unit}
\label{sec:om:Unit}
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