-
Notifications
You must be signed in to change notification settings - Fork 8
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
1 changed file
with
28 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,28 @@ | ||
--- | ||
media: | ||
- bluesky-galaxyproject | ||
mentions: | ||
bluesky-galaxyproject: | ||
- galaxyproject.bsky.social | ||
hashtags: | ||
bluesky-galaxyproject: | ||
- UseGalaxy | ||
- GalaxyProject | ||
- UniFreiburg | ||
- usegalaxy | ||
- EOSC | ||
- EuroScienceGateway | ||
--- | ||
📝 New blog post Released! | ||
|
||
![Workshop's participants standing in front of a monitor showing the two online participants](https://galaxyproject.org/news/2024-08-16-sanbi/sanbi.jpg) | ||
|
||
|
||
Public health laboratories often face the challenge of processing vast amounts of data, such as outputs from sequencing machines. This can quickly become overwhelming for scientists and bioinformaticians alike. To improve workflow efficiency and strengthen scientific infrastructure, these labs require skilled professionals proficient in Linux system administration and HPC compute environments. | ||
|
||
In response to this need, Professor Alan Christoffels and Peter van Heusden from the South African National Biodiversity Institute convened a group of experts from Africa, Europe, and beyond to develop a training curriculum aimed at bridging the sysadmin skills gap. This initiative seeks to bolster public health bioinformatics and genomic epidemiology across Africa. | ||
The diverse group of participants, hailing from public health labs, research institutions, and initiatives such as the Galaxy Project, de.KCD, UK MRC CLIMB\-BIG DATA, RSSE.Africa, Public Health Alliance for Genomic Epidemiology (PHA4GE), and H3ABioNet, gathered for a week\-long workshop at the University of the Western Cape in Cape Town, South Africa, to share knowledge and ideas. | ||
|
||
Together, the group identified potential roles in the public health labs and drafted curriculum modules inspired by the HPC Certification Forum, covering key areas such as hardware, monitoring, documentation, and storage. By actively contributing to discussions, Mira Kuntz (appearing on\-screen, left) helped pushing towards de.KCD's project goals of developing a structured training program and self\-learning units consisting of learning paths and modules and to train researchers, software developers and system administrators to perform their data processing and analysis. | ||
|
||
https://galaxyproject.org/news/2024-08-16-sanbi/ |