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Update cli.py example segment command #73

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merged 1 commit into from
Jun 28, 2024

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GenevieveBuckley
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There is no "predict" CLI command currently available, this should be "membrain segment" as described in segment_cli.py

membrain components --tomogram-path <path-to-your-tomo>
--connected-component-thres 5

There is no "predict" CLI command currently available, this should be "membrain segment" as described in segment_cli.py
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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 0.00%. Comparing base (bea5ae0) to head (c0695f0).
Report is 8 commits behind head on main.

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Additional details and impacted files
@@          Coverage Diff           @@
##            main     #73    +/-   ##
======================================
  Coverage   0.00%   0.00%            
======================================
  Files         40      46     +6     
  Lines       1411    1620   +209     
======================================
- Misses      1411    1620   +209     

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@LorenzLamm
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Many thanks for spotting this @GenevieveBuckley ! Merging this PR now :)

@LorenzLamm LorenzLamm merged commit c3f6ebd into teamtomo:main Jun 28, 2024
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3 participants