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Expand Up @@ -350,7 +350,7 @@ will not work either.
interactive(children=(IntSlider(value=34, description='plane', max=59), Output()), _dom_classes=('widget-interact',))

<function explore_slices.<locals>.display_slice at 0x7f0eddd44c20>
<function explore_slices.<locals>.display_slice at 0x7f2009c2d620>



Expand Down Expand Up @@ -472,7 +472,7 @@ slices interactively.
interactive(children=(IntSlider(value=34, description='plane', max=59), Output()), _dom_classes=('widget-interact',))

<function explore_slices.<locals>.display_slice at 0x7f0edc74b420>
<function explore_slices.<locals>.display_slice at 0x7f20086da7a0>



Expand Down Expand Up @@ -583,7 +583,7 @@ Note that this works in a static HTML page!

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 10.503 seconds)
**Total running time of the script:** (0 minutes 10.017 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_3d_image_processing.py:
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Expand Up @@ -148,7 +148,7 @@ The `imshow` function can display both grayscale and RGB(A) 2D images.
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers). Got range [64..4095].
<matplotlib.image.AxesImage object at 0x7fd05b786ea0>
<matplotlib.image.AxesImage object at 0x7f200a73bce0>
Expand Down Expand Up @@ -322,9 +322,6 @@ Click the play button to move along the ``z`` axis, through the stack of all
.. raw:: html
:file: images/sphx_glr_plot_3d_interaction_005.html

Expand All @@ -351,9 +348,6 @@ Combine channel facetting and slice animation
.. raw:: html
:file: images/sphx_glr_plot_3d_interaction_006.html

Expand Down Expand Up @@ -381,7 +375,7 @@ The biologist's eye can spot that the two bright blobs (best seen in
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 10.825 seconds)
**Total running time of the script:** (0 minutes 11.908 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_3d_interaction.py:
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Expand Up @@ -348,6 +348,9 @@ where the maximum eigenvalue is found (i.e., ``Z = coords[1]``).
.. raw:: html
:file: images/sphx_glr_plot_3d_structure_tensor_004.html




Expand Down Expand Up @@ -457,7 +460,7 @@ maximum eigenvalue is found.
.. raw:: html
:file: images/sphx_glr_plot_3d_structure_tensor_004.html
:file: images/sphx_glr_plot_3d_structure_tensor_005.html



Expand Down Expand Up @@ -487,7 +490,7 @@ tissue), especially in the Y-Z plane (``longitudinal=1``).
.. raw:: html
:file: images/sphx_glr_plot_3d_structure_tensor_005.html
:file: images/sphx_glr_plot_3d_structure_tensor_006.html



Expand Down Expand Up @@ -521,7 +524,7 @@ we would get the pancake situation.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 3.705 seconds)
**Total running time of the script:** (0 minutes 3.689 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_3d_structure_tensor.py:
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Expand Up @@ -335,7 +335,7 @@ labeled individually.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.996 seconds)
**Total running time of the script:** (0 minutes 2.223 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_coins_segmentation.py:
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Expand Up @@ -177,7 +177,7 @@ much lower than the overlap coefficient.
.. code-block:: none
np.float64(0.14385045878518943)
np.float64(0.2263687213676279)
Expand Down Expand Up @@ -281,7 +281,7 @@ would give us a good measure of how strong the association is.

.. code-block:: none
PCC: 0.837, p-val: 0
PCC: 0.821, p-val: 0
Expand Down Expand Up @@ -309,7 +309,7 @@ case.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.967 seconds)
**Total running time of the script:** (0 minutes 1.706 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_colocalization_metrics.py:
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Expand Up @@ -495,7 +495,7 @@ the opening processing step, when removing fine-grained features.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 27.440 seconds)
**Total running time of the script:** (0 minutes 28.707 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_cornea_spot_inpainting.py:
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Expand Up @@ -133,7 +133,7 @@ using `OpenCV train cascade utility
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 0.356 seconds)
**Total running time of the script:** (0 minutes 0.407 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_face_detection.py:
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Expand Up @@ -614,7 +614,7 @@ time points, and then becomes roughly constant.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.536 seconds)
**Total running time of the script:** (0 minutes 2.434 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_fluorescence_nuclear_envelope.py:
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Expand Up @@ -62,6 +62,9 @@ References
.. raw:: html
:file: images/sphx_glr_plot_haar_extraction_selection_classification_001.html




Expand Down Expand Up @@ -182,9 +185,9 @@ drastically speed up the computation while retaining accuracy.
.. image-sg:: /auto_examples/applications/images/sphx_glr_plot_haar_extraction_selection_classification_001.png
.. image-sg:: /auto_examples/applications/images/sphx_glr_plot_haar_extraction_selection_classification_002.png
:alt: The most important features
:srcset: /auto_examples/applications/images/sphx_glr_plot_haar_extraction_selection_classification_001.png
:srcset: /auto_examples/applications/images/sphx_glr_plot_haar_extraction_selection_classification_002.png
:class: sphx-glr-single-img


Expand Down Expand Up @@ -278,15 +281,15 @@ Once the features are extracted, we can train and test a new classifier.

.. code-block:: none
Computing the full feature set took 30.511s, plus 2.835s training, for an AUC of 1.00. Computing the restricted feature set took 0.174s, plus 2.414s training, for an AUC of 1.00.
Computing the full feature set took 29.637s, plus 2.836s training, for an AUC of 1.00. Computing the restricted feature set took 0.145s, plus 2.437s training, for an AUC of 1.00.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 39.185 seconds)
**Total running time of the script:** (0 minutes 38.517 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_haar_extraction_selection_classification.py:
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Expand Up @@ -519,7 +519,7 @@ cells in this sample. Therefore, we estimate the mitotic index to be:
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 3.189 seconds)
**Total running time of the script:** (0 minutes 3.226 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_human_mitosis.py:
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Expand Up @@ -191,7 +191,7 @@ Blend

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.703 seconds)
**Total running time of the script:** (0 minutes 2.733 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_image_comparison.py:
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Expand Up @@ -69,7 +69,7 @@ functions only work on gray-scale or binary images, so we set ``as_gray=True``.
.. code-block:: none
<matplotlib.image.AxesImage object at 0x7fbcfaf08ce0>
<matplotlib.image.AxesImage object at 0x7f0dd52216d0>
Expand Down Expand Up @@ -460,7 +460,7 @@ Additional Resources
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.614 seconds)
**Total running time of the script:** (0 minutes 2.465 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_morphology.py:
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Expand Up @@ -118,6 +118,9 @@ main vessels in the image.
:srcset: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_002.png
:class: sphx-glr-single-img

.. raw:: html
:file: images/sphx_glr_plot_pixel_graphs_003.html




Expand All @@ -144,9 +147,9 @@ define the main vessels.
.. image-sg:: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_003.png
.. image-sg:: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_004.png
:alt: Thresholded vesselness
:srcset: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_003.png
:srcset: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_004.png
:class: sphx-glr-single-img


Expand Down Expand Up @@ -187,9 +190,9 @@ to the position of the centroid!
.. image-sg:: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_004.png
.. image-sg:: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_005.png
:alt: Vessel graph center vs centroid
:srcset: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_004.png
:srcset: /auto_examples/applications/images/sphx_glr_plot_pixel_graphs_005.png
:class: sphx-glr-single-img


Expand All @@ -199,7 +202,7 @@ to the position of the centroid!

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (1 minutes 18.440 seconds)
**Total running time of the script:** (1 minutes 18.339 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_pixel_graphs.py:
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Original file line number Diff line number Diff line change
Expand Up @@ -1120,7 +1120,7 @@ on increasing image size:

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 46.815 seconds)
**Total running time of the script:** (0 minutes 46.931 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_rank_filters.py:
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Original file line number Diff line number Diff line change
Expand Up @@ -98,9 +98,6 @@ exist in roughly the same position from one frame to the next.
.. raw:: html
:file: images/sphx_glr_plot_solidification_tracking_001.html

Expand Down Expand Up @@ -136,7 +133,7 @@ at the second frame.
.. raw:: html
:file: images/sphx_glr_plot_solidification_tracking_002.html
:file: images/sphx_glr_plot_solidification_tracking_001.html



Expand Down Expand Up @@ -174,7 +171,7 @@ the intensity values to [0, 1].
.. raw:: html
:file: images/sphx_glr_plot_solidification_tracking_003.html
:file: images/sphx_glr_plot_solidification_tracking_002.html



Expand Down Expand Up @@ -209,7 +206,7 @@ noise beyond the interface.
.. raw:: html
:file: images/sphx_glr_plot_solidification_tracking_004.html
:file: images/sphx_glr_plot_solidification_tracking_003.html



Expand Down Expand Up @@ -250,7 +247,7 @@ methods that may work better for different applications).
.. raw:: html
:file: images/sphx_glr_plot_solidification_tracking_005.html
:file: images/sphx_glr_plot_solidification_tracking_004.html



Expand Down Expand Up @@ -394,7 +391,7 @@ along with its bounding box (bbox) in red.
.. raw:: html
:file: images/sphx_glr_plot_solidification_tracking_006.html
:file: images/sphx_glr_plot_solidification_tracking_005.html



Expand Down Expand Up @@ -422,7 +419,7 @@ in time (0th image) because the interface is moving upward.
.. raw:: html
:file: images/sphx_glr_plot_solidification_tracking_007.html
:file: images/sphx_glr_plot_solidification_tracking_006.html



Expand Down Expand Up @@ -462,7 +459,7 @@ position of the S-L interface.
.. raw:: html
:file: images/sphx_glr_plot_solidification_tracking_008.html
:file: images/sphx_glr_plot_solidification_tracking_007.html



Expand Down Expand Up @@ -502,9 +499,9 @@ polynomial to the scatter plot. The velocity is the first-order coefficient.
.. image-sg:: /auto_examples/applications/images/sphx_glr_plot_solidification_tracking_009.png
.. image-sg:: /auto_examples/applications/images/sphx_glr_plot_solidification_tracking_008.png
:alt: S-L interface location vs. time
:srcset: /auto_examples/applications/images/sphx_glr_plot_solidification_tracking_009.png
:srcset: /auto_examples/applications/images/sphx_glr_plot_solidification_tracking_008.png
:class: sphx-glr-single-img


Expand All @@ -514,7 +511,7 @@ polynomial to the scatter plot. The velocity is the first-order coefficient.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 4.308 seconds)
**Total running time of the script:** (0 minutes 4.184 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_solidification_tracking.py:
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2 changes: 1 addition & 1 deletion dev/_sources/auto_examples/applications/plot_text.rst.txt
Original file line number Diff line number Diff line change
Expand Up @@ -83,7 +83,7 @@ just wants to write onto the image, this step is not necessary.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 0.970 seconds)
**Total running time of the script:** (0 minutes 0.988 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_text.py:
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