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[AUTO] Update data #60

Merged
merged 2 commits into from
Sep 8, 2023
Merged

[AUTO] Update data #60

merged 2 commits into from
Sep 8, 2023

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damianooldoni-bot
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Brief description

This is an automatically generated PR.
The following steps are all automatically performed:

  • Fetch raw data
  • Map raw data to DwC standard and save the output in ./data/processed
  • Get an overview of the changes
  • Run some tests, e.g. check the uniqueness of occurrenceID, check that all occurrences have a eventID and scientificName, ...

Note to the reviewer: the workflow automation is still in a development phase. Please, check the output thoroughly before merging to main. In case, improve the data fecthing fetch_data.Rmd, the mapping dwc_mapping.Rmd, both in ./src or the GitHub workflows fetch-data.yaml and mapping_and_testing.yaml in ./.github/workflows.

Files changed:
M	data/raw/rato_data.csv
Files changed:
M	data/processed/occurrence.csv
@PietrH
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PietrH commented Sep 8, 2023

87 new records, no deleted records. No new species.

10 species:

scientificName n
Ondatra zibethicus 50
Vespa velutina 10
Trachemys scripta 8
Martes foina 5
Ludwigia grandiflora 4
Fallopia japonica 3
Myriophyllum aquaticum 3
Oryctolagus cuniculus 2
Hydrocotyle ranunculoides 1
Impatiens glandulifera 1

On 4 days:

date n
2023-08-22 27
2023-08-21 26
2023-08-23 17
2023-08-24 17

@PietrH
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PietrH commented Sep 8, 2023

Issue with samplingProtocol and samplingEffort: #61

@PietrH PietrH merged commit bfd188b into main Sep 8, 2023
@PietrH PietrH deleted the automatic-update-2023-09-08T03-49-44Z branch September 8, 2023 07:52
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3 participants