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storage: Fix NPE at CohortVariantStatsDriver. #TASK-6722 #2384

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storage: Fix NPE at CohortVariantStatsDriver. #TASK-6722

storage: Fix NPE at CohortVariantStatsDriver. #TASK-6722 #2384

GitHub Actions / Surefire tests report hdp3.1 opencga-analysis runShortTests,runMediumTests,runLongTests failed Nov 29, 2024 in 0s

230 tests run, 12 skipped, 3 failed.

Annotations

Check failure on line 439 in opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java

See this annotation in the file changed.

@github-actions github-actions / Surefire tests report hdp3.1 opencga-analysis runShortTests,runMediumTests,runLongTests

VariantAnalysisTest.testSampleStats[hadoop] 

expected:<1> but was:<2>
Raw output 
java.lang.AssertionError: expected:<1> but was:<2>
	at org.junit.Assert.fail(Assert.java:89)
	at org.junit.Assert.failNotEquals(Assert.java:835)
	at org.junit.Assert.assertEquals(Assert.java:647)
	at org.junit.Assert.assertEquals(Assert.java:633)
	at org.opencb.opencga.analysis.variant.VariantAnalysisTest.sampleVariantStats(VariantAnalysisTest.java:515)
	at org.opencb.opencga.analysis.variant.VariantAnalysisTest.sampleVariantStats(VariantAnalysisTest.java:469)
	at org.opencb.opencga.analysis.variant.VariantAnalysisTest.sampleVariantStats(VariantAnalysisTest.java:464)
	at org.opencb.opencga.analysis.variant.VariantAnalysisTest.testSampleStats(VariantAnalysisTest.java:439)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56)
	at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
	at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
	at org.junit.rules.ExpectedException$ExpectedExceptionStatement.evaluate(ExpectedException.java:258)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100)
	at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:366)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runners.Suite.runChild(Suite.java:128)
	at org.junit.runners.Suite.runChild(Suite.java:27)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runners.Suite.runChild(Suite.java:128)
	at org.junit.runners.Suite.runChild(Suite.java:27)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.apache.maven.surefire.junitcore.JUnitCore.run(JUnitCore.java:49)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.createRequestAndRun(JUnitCoreWrapper.java:120)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.executeEager(JUnitCoreWrapper.java:95)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.execute(JUnitCoreWrapper.java:75)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.execute(JUnitCoreWrapper.java:69)
	at org.apache.maven.surefire.junitcore.JUnitCoreProvider.invoke(JUnitCoreProvider.java:146)
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:385)
	at org.apache.maven.surefire.booter.ForkedBooter.execute(ForkedBooter.java:162)
	at org.apache.maven.surefire.booter.ForkedBooter.run(ForkedBooter.java:507)
	at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:495)

Check failure on line 1 in opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/VariantAnalysisTest.java

See this annotation in the file changed.

@github-actions github-actions / Surefire tests report hdp3.1 opencga-analysis runShortTests,runMediumTests,runLongTests

VariantAnalysisTest.testSampleStatsSampleFilter[hadoop] 

java.lang.StackOverflowError
	at org.opencb.commons.datastore.core.ObjectMap.getString(ObjectMap.java:95)
Raw output 
java.lang.StackOverflowError
	at org.opencb.commons.datastore.core.ObjectMap.getString(ObjectMap.java:95)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:822)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.getIncludeSamplesList(VariantQueryProjectionParser.java:693)
	at org.opencb.opencga.storage.core.variant.query.VariantQueryUtils.parseSampleData(VariantQueryUtils.java:862)
	at org.opencb.opencga.storage.core.variant.query.projection.VariantQueryProjectionParser.get

Check failure on line 385 in opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java

See this annotation in the file changed.

@github-actions github-actions / Surefire tests report hdp3.1 opencga-analysis runShortTests,runMediumTests,runLongTests

VariantOperationsTest.testSetup[hadoop] 

Error executing operation 'variant-setup' : For input string: "500Mi"
Raw output 
org.opencb.opencga.storage.core.exceptions.StorageEngineException: Error executing operation 'variant-setup' : For input string: "500Mi"
	at org.opencb.opencga.analysis.variant.manager.VariantStorageManager.secureTool(VariantStorageManager.java:1320)
	at org.opencb.opencga.analysis.variant.manager.VariantStorageManager.secureOperation(VariantStorageManager.java:1253)
	at org.opencb.opencga.analysis.variant.manager.VariantStorageManager.variantSetup(VariantStorageManager.java:531)
	at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:385)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:498)
	at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:59)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:56)
	at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
	at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
	at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.BlockJUnit4ClassRunner$1.evaluate(BlockJUnit4ClassRunner.java:100)
	at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:366)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:103)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:63)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runners.Suite.runChild(Suite.java:128)
	at org.junit.runners.Suite.runChild(Suite.java:27)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
	at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.junit.runners.Suite.runChild(Suite.java:128)
	at org.junit.runners.Suite.runChild(Suite.java:27)
	at org.junit.runners.ParentRunner$4.run(ParentRunner.java:331)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:79)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:329)
	at org.junit.runners.ParentRunner.access$100(ParentRunner.java:66)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:293)
	at org.junit.runners.ParentRunner$3.evaluate(ParentRunner.java:306)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:413)
	at org.apache.maven.surefire.junitcore.JUnitCore.run(JUnitCore.java:49)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.createRequestAndRun(JUnitCoreWrapper.java:120)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.executeEager(JUnitCoreWrapper.java:95)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.execute(JUnitCoreWrapper.java:75)
	at org.apache.maven.surefire.junitcore.JUnitCoreWrapper.execute(JUnitCoreWrapper.java:69)
	at org.apache.maven.surefire.junitcore.JUnitCoreProvider.invoke(JUnitCoreProvider.java:146)
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:385)
	at org.apache.maven.surefire.booter.ForkedBooter.execute(ForkedBooter.java:162)
	at org.apache.maven.surefire.booter.ForkedBooter.run(ForkedBooter.java:507)
	at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:495)
Caused by: java.lang.NumberFormatException: For input string: "500Mi"
	at sun.misc.FloatingDecimal.readJavaFormatString(FloatingDecimal.java:2043)
	at sun.misc.FloatingDecimal.parseDouble(FloatingDecimal.java:110)
	at java.lang.Double.parseDouble(Double.java:538)
	at org.opencb.opencga.core.common.IOUtils.fromHumanReadableToByte(IOUtils.java:417)
	at org.opencb.opencga.storage.hadoop.variant.HadoopVariantStorageEngine.inferConfigurationParams(HadoopVariantStorageEngine.java:1159)
	at org.opencb.opencga.analysis.variant.manager.operations.VariantSetupOperationManager.setup(VariantSetupOperationManager.java:42)
	at org.opencb.opencga.analysis.variant.manager.VariantStorageManager.lambda$variantSetup$29(VariantStorageManager.java:532)
	at org.opencb.opencga.analysis.variant.manager.VariantStorageManager.secureTool(VariantStorageManager.java:1313)
	... 54 more
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