Adresses #2791 NTR age-associated B cell

[aleixpuigb]

Fixes #2791 NTR age-associated B cell

[Caroline-99]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -base file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2025-01-08/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-master.owl/cl-base.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2025-01-08/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-pr.owl/cl-base.owl

Ontology imports

Ontology annotations

age-associated B cell http://purl.obolibrary.org/obo/CL_4033094

Added

• age-associated B cell contributor 0000-0001-6677-8489

• age-associated B cell hasRelatedSynonym "ABC"

  • hasSynonymType OMO_0003000

  • hasDbXref "PMID:35798993"

• age-associated B cell contributor 0000-0001-7655-4833

• age-associated B cell IAO_0000115 "A transcriptionally distinct memory B cell whose presence increases with age, during infections, and in autoimmune diseases. In humans and mice, this cell type can be identified by the expression of T-bet, CD11c, CD11b, and the lack of CD21. An age-associated B cell responds to TLR stimuli, may produce autoantibodies, and participates in antiviral responses and pathogen clearance."

  • hasDbXref "PMID:31986068"

  • hasDbXref "PMID:35298565"

  • hasDbXref "PMID:35798993"

  • hasDbXref "PMID:30873171"

• age-associated B cell date "2025-01-08T14:44:57Z"^^dateTime

• age-associated B cell label "age-associated B cell"

• Class: age-associated B cell

• age-associated B cell SubClassOf memory B cell

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

age-associated B cell http://purl.obolibrary.org/obo/CL_4033094

Added

• age-associated B cell contributor 0000-0001-6677-8489

• age-associated B cell has_related_synonym "ABC"

  • database_cross_reference "PMID:35798993"

  • has_synonym_type abbreviation

• age-associated B cell contributor 0000-0001-7655-4833

• age-associated B cell definition "A transcriptionally distinct memory B cell whose presence increases with age, during infections, and in autoimmune diseases. In humans and mice, this cell type can be identified by the expression of T-bet, CD11c, CD11b, and the lack of CD21. An age-associated B cell responds to TLR stimuli, may produce autoantibodies, and participates in antiviral responses and pathogen clearance."

  • database_cross_reference "PMID:35798993"

  • database_cross_reference "PMID:30873171"

  • database_cross_reference "PMID:31986068"

  • database_cross_reference "PMID:35298565"

• age-associated B cell date "2025-01-08T14:44:57Z"^^dateTime

• age-associated B cell label "age-associated B cell"

• Class: age-associated B cell

• age-associated B cell SubClassOf memory B cell

[Caroline-99]

Everything looks good.