Merge pull request #1480 from nf-core/postrelease_3.18.0

Bump versions after release 3.18.0
nf-core · Dec 21, 2024 · 766b0a3 · 766b0a3
2 parents 324dcdf + e715898
commit 766b0a3
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -3,6 +3,14 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+# 3.19.0dev - xxxx-xx-xx
+
+### Credits
+
+### Enhancements & fixes
+
+- [PR #1480](https://github.com/nf-core/rnaseq/pull/1480) - Bump version after release 3.18.0
+
 # 3.18.0 - 2024-12-19
 
 ### Credits

diff --git a/nextflow.config b/nextflow.config
@@ -333,7 +333,7 @@ manifest {
     description     = """RNA sequencing analysis pipeline for gene/isoform quantification and extensive quality control."""
     mainScript      = 'main.nf'
     nextflowVersion = '!>=24.04.2'
-    version         = '3.18.0'
+    version         = '3.19.0dev'
     doi             = 'https://doi.org/10.5281/zenodo.1400710'
 }
 

diff --git a/tests/default.nf.test.snap b/tests/default.nf.test.snap
@@ -46,7 +46,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -240,7 +240,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/featurecounts_group_type.nf.test.snap b/tests/featurecounts_group_type.nf.test.snap
@@ -46,7 +46,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -234,7 +234,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/hisat2.nf.test.snap b/tests/hisat2.nf.test.snap
@@ -47,7 +47,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -237,7 +237,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/kallisto.nf.test.snap b/tests/kallisto.nf.test.snap
@@ -59,7 +59,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -319,7 +319,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/min_mapped_reads.nf.test.snap b/tests/min_mapped_reads.nf.test.snap
@@ -137,7 +137,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -1246,7 +1246,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/remove_ribo_rna.nf.test.snap b/tests/remove_ribo_rna.nf.test.snap
@@ -143,7 +143,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -1460,7 +1460,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/salmon.nf.test.snap b/tests/salmon.nf.test.snap
@@ -53,7 +53,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -392,7 +392,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/skip_qc.nf.test.snap b/tests/skip_qc.nf.test.snap
@@ -43,7 +43,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -182,7 +182,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/skip_trimming.nf.test.snap b/tests/skip_trimming.nf.test.snap
@@ -133,7 +133,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/star_rsem.nf.test.snap b/tests/star_rsem.nf.test.snap
@@ -137,7 +137,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -1339,7 +1339,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/tests/umi.nf.test.snap b/tests/umi.nf.test.snap
@@ -140,7 +140,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -1644,7 +1644,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [
@@ -2797,7 +2797,7 @@
                     "untar": 1.34
                 },
                 "Workflow": {
-                    "nf-core/rnaseq": "v3.18.0"
+                    "nf-core/rnaseq": "v3.19.0dev"
                 }
             },
             [

diff --git a/workflows/rnaseq/assets/multiqc/multiqc_config.yml b/workflows/rnaseq/assets/multiqc/multiqc_config.yml
@@ -1,7 +1,7 @@
 report_comment: >
-  This report has been generated by the <a href="https://github.com/nf-core/rnaseq/releases/tag/3.18.0"
+  This report has been generated by the <a href="https://github.com/nf-core/rnaseq/tree/dev"
   target="_blank">nf-core/rnaseq</a> analysis pipeline. For information about how
-  to interpret these results, please see the <a href="https://nf-co.re/rnaseq/3.18.0/docs/output"
+  to interpret these results, please see the <a href="https://nf-co.re/rnaseq/dev/docs/output"
   target="_blank">documentation</a>.
 report_section_order:
   # Important checks and failures