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Update mpox datasets to include new lineages B.1.21, B.1.22, and C.1.1 #192

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merged 2 commits into from
Apr 17, 2024
Merged

Update mpox datasets to include new lineages B.1.21, B.1.22, and C.1.1 #192

merged 2 commits into from
Apr 17, 2024

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@corneliusroemer corneliusroemer commented Apr 17, 2024 •
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  • New hMPXV-1 lineages B.1.21, B.1.22, and C.1.1 are now included in the dataset. For more information on these lineages, see the hMPXV-1 lineage definitions PR
  • The sequences used in the reference trees have been updated to include the latest sequences available in Genbank as of 2024-04-16

Relates to mpxv-lineages/lineage-designation#37 and nextstrain/mpox#240

Test via https://clades.nextstrain.org/?dataset-server=gh:@mpox-2024-04@

@corneliusroemer corneliusroemer deployed to refs/pull/192/merge April 17, 2024 16:00 — with GitHub Actions Active
@corneliusroemer corneliusroemer changed the title ] Update mpox datasets to include new lineages B.1.21, B.1.22, and C.1.1 Apr 17, 2024
@corneliusroemer corneliusroemer requested a review from rneher April 17, 2024 16:00
@corneliusroemer corneliusroemer merged commit 83de556 into master Apr 17, 2024
@corneliusroemer corneliusroemer deleted the mpox-2024-04 branch April 17, 2024 16:53
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@rneher rneher Awaiting requested review from rneher

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