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Fix failing test
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Signed-off-by: Ben Sherman <[email protected]>
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bentsherman committed Dec 12, 2024
1 parent aa50499 commit 9ce8c5e
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions tests/checks/output-dsl.nf/.checks
Original file line number Diff line number Diff line change
Expand Up @@ -56,9 +56,9 @@ rm -rf results

$NXF_RUN --save_bam_bai -resume | tee stdout

[[ `grep INFO .nextflow.log | grep -c 'Submitted process > fastqc'` == 3 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Submitted process > align'` == 3 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Submitted process > quant'` == 3 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Cached process > fastqc'` == 3 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Cached process > align'` == 3 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Cached process > quant'` == 3 ]] || false

[[ -f results/fastqc/alpha.fastqc.log ]] || false
[[ -f results/fastqc/beta.fastqc.log ]] || false
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