Nextflow CI

Fix bugs with workflow outputs #7419

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Run time

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Job	Run time
Build (17)	8m 15s
Build (23)	8m 14s
test (17, test_integration)	14m 15s
test (17, test_docs)	5m 28s
test-e2e	0s
test (17, test_aws)	29m 5s
test (17, test_azure)	13m 43s
test (17, test_google)	38m 1s
test (17, test_wave)	23m 4s
test (23, test_integration)	14m 46s
test (23, test_docs)	5m 54s
test (23, test_aws)	28m 54s
test (23, test_azure)	15m 23s
test (23, test_google)	37m 55s
test (23, test_wave)	22m 50s
	4h 25m 47s