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Fix length of t dimension for timing variables #295

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Nov 20, 2024
Merged

Fix length of t dimension for timing variables #295

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13 changes: 8 additions & 5 deletions moment_kinetics/src/file_io.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -2735,7 +2735,10 @@ function write_timing_data(io_moments, t_idx, dfns=false)
# If we got the length of `time:$this_name`, the variable might have
# the wrong length (e.g. if it has only just been created and has
# length 1).
t_idx = length(io_group["time:" * first(keys(timer_names_all_ranks))])
length_check_var = io_group["time:" * first(keys(timer_names_all_ranks))]
this_t_idx = size(length_check_var, ndims(length_check_var))
else
this_t_idx = t_idx
end
if parallel_io
timer_coord = (local_io_range=1:block_size[],
Expand All @@ -2748,12 +2751,12 @@ function write_timing_data(io_moments, t_idx, dfns=false)
io_time = io_group["time:" * this_name]
io_ncalls = io_group["ncalls:" * this_name]
io_allocs = io_group["allocs:" * this_name]
@views append_to_dynamic_var(io_time, gathered_times_data[counter,:], t_idx,
parallel_io, timer_coord)
@views append_to_dynamic_var(io_time, gathered_times_data[counter,:],
this_t_idx, parallel_io, timer_coord)
@views append_to_dynamic_var(io_ncalls, gathered_ncalls_data[counter,:],
t_idx, parallel_io, timer_coord)
this_t_idx, parallel_io, timer_coord)
@views append_to_dynamic_var(io_allocs, gathered_allocs_data[counter,:],
t_idx, parallel_io, timer_coord)
this_t_idx, parallel_io, timer_coord)
counter += 1
for (sub_name, sub_dict) ∈ pairs(names_dict)
write_level(sub_dict, this_name * ";" * sub_name)
Expand Down