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Coll_krook heat flux closure, updated PI_controller for density, and added PI_controller for temperature #283

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Merge pull request #279 from mabarnes/fix_dependencies_HDF5_MPI

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Coll_krook heat flux closure, updated PI_controller for density, and added PI_controller for temperature #283

Merge pull request #279 from mabarnes/fix_dependencies_HDF5_MPI
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