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@hms-dbmi

Harvard Medical School - Department of Biomedical Informatics

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  1. UpSetR UpSetR Public

    An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

    R 767 158

  2. scde scde Public

    R package for analyzing single-cell RNA-seq data

    R 173 66

  3. viv viv Public

    Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

    JavaScript 293 47

Repositories

Showing 10 of 361 repositories
  • avillachlab-jenkins Public
    hms-dbmi/avillachlab-jenkins’s past year of commit activity
    HCL 5 Apache-2.0 6 0 0 Updated Jan 24, 2025
  • cellpop Public
    hms-dbmi/cellpop’s past year of commit activity
    Jupyter Notebook 0 MIT 1 11 1 Updated Jan 24, 2025
  • pic-sure-bdc-release-control Public
    hms-dbmi/pic-sure-bdc-release-control’s past year of commit activity
    1 Apache-2.0 8 0 0 Updated Jan 24, 2025
  • pic-sure-metadata-curation Public

    Parse and generate variable-level data to be exposed through the search interface.

    hms-dbmi/pic-sure-metadata-curation’s past year of commit activity
    SAS 2 Apache-2.0 2 0 0 Updated Jan 24, 2025
  • pic-sure-auth-microapp Public
    hms-dbmi/pic-sure-auth-microapp’s past year of commit activity
    Java 4 Apache-2.0 5 0 1 Updated Jan 24, 2025
  • PIC-SURE-Frontend Public

    A frontend for the PIC-SURE API

    hms-dbmi/PIC-SURE-Frontend’s past year of commit activity
    TypeScript 1 Apache-2.0 0 0 5 Updated Jan 24, 2025
  • vizarr Public

    A minimal Zarr image viewer based on Viv.

    hms-dbmi/vizarr’s past year of commit activity
    TypeScript 134 MIT 18 19 (1 issue needs help) 11 Updated Jan 24, 2025
  • biodata_catalyst_stigmatizing_variables Public
    hms-dbmi/biodata_catalyst_stigmatizing_variables’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 0 0 2 Updated Jan 24, 2025
  • i2b2v2-webclient Public
    hms-dbmi/i2b2v2-webclient’s past year of commit activity
    JavaScript 2 4 1 0 Updated Jan 24, 2025
  • chromoscope Public

    Interactive multiscale visualization for structural variation in human genomes

    hms-dbmi/chromoscope’s past year of commit activity
    TypeScript 67 MIT 7 33 2 Updated Jan 23, 2025
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