Add config for devtest

hisplan · Nov 11, 2021 · f8f2f07 · f8f2f07
1 parent 945777c
commit f8f2f07
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Showing 2 changed files with 26 additions and 0 deletions.
diff --git a/configs/devtest.inputs.aws.json b/configs/devtest.inputs.aws.json
@@ -0,0 +1,17 @@
+{
+    "CellRangerVdj.sampleName": "sc5p_v2_hs_B_1k_b",
+    "CellRangerVdj.fastqNames": "sc5p_v2_hs_B_1k_b",
+    "CellRangerVdj.referenceGenome": "GRCh38",
+    "CellRangerVdj.inputFastq": [
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L001_I1_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L001_I2_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L001_R1_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L001_R2_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L002_I1_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L002_I2_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L002_R1_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L002_R2_001.fastq.gz"
+    ],
+    "CellRangerVdj.chain": "auto",
+    "CellRangerVdj.dockerRegistry": "quay.io/hisplan"
+}
diff --git a/configs/devtest.labels.aws.json b/configs/devtest.labels.aws.json
@@ -0,0 +1,9 @@
+{
+    "pipelineType": "CellRangerVdj",
+    "project": "DEVTEST",
+    "sample": "Human B cells/Healthy Donor",
+    "owner": "chunj",
+    "destination": "s3://dp-lab-gwf-core/outputs/cr-vdj-results/",
+    "transfer": "skip",
+    "comment": ""
+}