correcting spelling of VEuPathDB

app/apis/catalog/brc-analytics-catalog/common/entities.ts

@@ -20,7 +20,7 @@ export interface BRCDataCatalogGenome {
   strain: string;
   supercontigs: number;
   ucscBrowserUrl: string;
-  vEuPathDbProject: string;
+  vEuPathDBProject: string;
 }
 
 export interface EntitiesResponse<R> {

app/components/EntityList/components/Organisms/content/organismsWarning.mdx

@@ -1,7 +1,7 @@
 <Alert {...props}>
   If you do not see your organism in this list: it will be there! We are in the
   process of ingesting sequences and annotations for all 785 taxa from
-  VEuPathDb. The table below is generated by comparing the list maintained by
+  VEuPathDB. The table below is generated by comparing the list maintained by
   VEuPathDB against official NCBI genome builds. The three buttons adjacent to
   each taxon direct you to a page listing available analytical workflows as well
   as direct links to genomic data (NCBI Datasets) and a genome browser (UCSC). A

app/components/Home/content/sectionSubHero.mdx

@@ -1,5 +1,5 @@
 BRC Analytics is your new destination for analysis of biological
-data related to pathogens. Building on the foundation of VEuPathDb
+data related to pathogens. Building on the foundation of VEuPathDB
 the platform will provide access and analysis capabilities for
 [785 eukaryotic pathogens](/data/organisms), hosts, and vectors. The functionality will
 be developed and made available incrementally over the [following months](/roadmap).

app/components/content/sectionAbout.mdx

@@ -170,7 +170,7 @@
               Biotechnology Information (NCBI) supplemented with custom
               annotations stored and distributed by the UCSC Table Browser. This
               data will include annotations that were previously available from
-              the VEuPathDb resource. Users will be able to view, download and
+              the VEuPathDB resource. Users will be able to view, download and
               visualize the data.{" "}
             </span>
             <span>

app/components/content/sectionRoadmap.mdx

@@ -10,28 +10,28 @@
     <SectionContent paired>
       <Grid gridSx={{ gap: 4 }}>
         <Accordion>
-          <AccordionSummary>VEuPathDb database migration</AccordionSummary>
+          <AccordionSummary>VEuPathDB database migration</AccordionSummary>
           <AccordionDetails>
-            This set of tasks deals with transferring data from VEuPathDb
+            This set of tasks deals with transferring data from VEuPathDB
             infrastructure and creating a list of genomes that will be initially
             maintained within BRC Analytics. The number of taxa included in our
             system will
 
-            1. Transferring databases and associated data from VEuPathDb servers to TACC infrastructure.
-            1. Understanding the structure of VEuPathDb database and deciding which data will be ingested as custom
+            1. Transferring databases and associated data from VEuPathDB servers to TACC infrastructure.
+            1. Understanding the structure of VEuPathDB database and deciding which data will be ingested as custom
             tracks for the BRC Analytics instance of the UCSC Genome Browser.
-            1. Uncovering how JBrowse instances were created within VEuPathDb gene pages and replicating this data at
+            1. Uncovering how JBrowse instances were created within VEuPathDB gene pages and replicating this data at
             the BRC Analytics instance of the UCSC Genome Browser.
           </AccordionDetails>
         </Accordion>
         <Accordion>
           <AccordionSummary>Harmonization of genomic data for all taxa</AccordionSummary>
           <AccordionDetails>
-            This set of tasks ensures that BRC Analytics provides access to the latest versions of all 785 VEuPathDb
+            This set of tasks ensures that BRC Analytics provides access to the latest versions of all 785 VEuPathDB
             taxa and associated annotations.
 
-            1. Build UCSC Genome Browsers for all 785 taxa by matching genomes found in VEuPathDb against NCBI Datasets.
-            1. Add annotations that can be extracted from the VEuPathDb databases and JBrowse instances (related to 2
+            1. Build UCSC Genome Browsers for all 785 taxa by matching genomes found in VEuPathDB against NCBI Datasets.
+            1. Add annotations that can be extracted from the VEuPathDB databases and JBrowse instances (related to 2
             and 3 above)
             1. Create links from UCSC Gene Pages to NCBI Gene pages
             1. Work with NCBI on evolution of gene pages to contain information valuable for understanding the structure
@@ -52,15 +52,15 @@
             1. Develop "simplified workflow" interface (see [Simplified workflow run interface
             galaxy#18883](https://github.com/galaxyproject/galaxy/issues/18883))
             1. Develop and polish workflows for variant discovery, epigenetics, transcriptomics, assembly, and protein
-            folding that were previously available to the users on VEuPathDb Galaxy instance.
+            folding that were previously available to the users on VEuPathDB Galaxy instance.
           </AccordionDetails>
         </Accordion>
         <Accordion>
           <AccordionSummary>Help and community outreach</AccordionSummary>
           <AccordionDetails>
             1. Create dedicated linkedin, mastodon, and bluesky accounts
             1. Create a dedicated support channel using Discourse infrastructure.
-            1. Try to connect with as many users of VEuPathDb as possible to solicit their feedback across multiple
+            1. Try to connect with as many users of VEuPathDB as possible to solicit their feedback across multiple
             areas including: which features are needed, what genomes should be integrated, which key datasets need to be
             re-analyzed in put in the context of available genomic data.
             1. Beginning on Oct 1st begin posting regular updates via social media channels.

app/viewModelBuilders/catalog/brc-analytics-catalog/common/viewModelBuilders.ts

@@ -156,7 +156,7 @@ export const buildGenomeDetails = (
       value: genome.genomeVersionAssemblyId,
     })
   );
-  keyValuePairs.set("VeUPathDB Project", genome.vEuPathDbProject);
+  keyValuePairs.set("VEuPathDB Project", genome.vEuPathDBProject);
   keyValuePairs.set("Contigs", genome.contigs);
   keyValuePairs.set("Super Contigs", genome.supercontigs);
   keyValuePairs.set("Chromosomes", genome.chromosomes);
@@ -225,11 +225,11 @@ export const buildSupercontigs = (
  * @param genome - Genome entity.
  * @returns Props to be used for the cell.
  */
-export const buildVEuPathDbProject = (
+export const buildVEuPathDBProject = (
   genome: BRCDataCatalogGenome
 ): ComponentProps<typeof C.BasicCell> => {
   return {
-    value: genome.vEuPathDbProject,
+    value: genome.vEuPathDBProject,
   };
 };
 

app/views/RoadmapView/roadmapView.tsx

@@ -9,7 +9,7 @@ export const RoadmapView = (): JSX.Element => {
       <SectionHero
         breadcrumbs={BREADCRUMBS}
         head="Roadmap"
-        subHead="BRC Analytics plans to deliver new powerful analysis functionality while provide access to some features of the VEuPathDb system. This will be an iterative process involving multiple steps in several areas."
+        subHead="BRC Analytics plans to deliver new powerful analysis functionality while provide access to some features of the VEuPathDB system. This will be an iterative process involving multiple steps in several areas."
       />
       <SectionRoadmap />
     </Fragment>

files/build-catalog.ts

@@ -30,7 +30,7 @@ async function buildGenomes(): Promise<BRCDataCatalogGenome[]> {
       strain: row.Strain,
       supercontigs: parseNumber(row.Supercontigs),
       ucscBrowserUrl: row.ucscBrowser,
-      vEuPathDbProject: row["VEuPathDB Project"],
+      vEuPathDBProject: row["VEuPathDB Project"],
     })
   );
   return mappedRows.sort((a, b) =>