feat: add workflow and assemblies yml files first pass (#206)

files/source/assemblies.yml

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+assemblies:
+  - accession: GCF_000002765.6
+    ploidy: haploid
+    source: plasmodb.org
+  - accession: GCF_000002415.2
+    ploidy: haploid
+    ncbi_dataset: true
+  - accession: GCA_900093555.2
+    ploidy: haploid
+    source: plasmodb.org
+  - accession: GCF_900002385.2
+    ploidy: haploid
+    source: plasmodb.org
+  - accession: GCF_900681995.1
+    ploidy: haploid
+    source: plasmodb.org
+  - accession: GCF_016801865.2
+    ploidy: diploid
+    source: vectorbase.org
+  - accession: GCF_015732765.1
+    ploidy: diploid
+    source: vectorbase.org
+  - accession: GCF_943734735.2
+    ploidy: diploid
+    ncbi_dataset: true
+  - accession: GCF_000005575.2
+    ploidy: diploid
+    source: vectorbase.org
+  - accession: GCF_000006565.2
+    ploidy: haploid
+    source: toxodb.org
+  - accession: GCF_000195955.2
+    ploidy: haploid
+  - accession: GCF_018416015.2
+    ploidy: haploid
+    ncbi_dataset: true
+  - accession: GCA_000170175.2
+    ploidy: haploid
+    source: fungidb.org
+  - accession: GCF_000149335.2
+    ploidy: haploid
+    source: fungidb.org
+  - accession: GCF_000209065.1
+    ploidy: diploid
+    source: tritrypdb.org
+  - accession: GCF_000002445.2
+    ploidy: diploid
+    source: tritrypdb.org
+  - accession: GCF_000002725.2
+    ploidy: diploid
+    source: tritrypdb.org
+  - accession: GCF_000227135.1
+    ploidy: diploid
+    source: tritrypdb.org
+  - accession: GCF_000002845.2
+    ploidy: diploid
+    source: tritrypdb.org
+  - accession: GCF_009858895.2
+    ploidy: haploid
+  - accession: GCF_000857045.1
+    ploidy: haploid
+  - accession: GCF_000002655.1
+    ploidy: haploid
+    source: fungidb.org
+  - accession: GCF_000182965.3
+    ploidy: diploid
+    source: fungidb.org
+  - accession: GCF_000091045.1
+    ploidy: haploid
+    ncbi_dataset: true
+  - accession: GCA_000149245.3
+    ploidy: haploid
+    source: fungidb.org

files/source/galaxy_workflows.yml

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+workflows:
+  - trs_id: "https://dockstore.org/api/ga4gh/trs/v2/tools/#workflow/github.com/iwc-workflows/rnaseq-pe/main/versions/v0.9"
+    type: "REGULATION"
+    description: "Workflows for the analysis of ChIP-seq, ATAC-Seq, and beyond."
+    ploidy: "any"
+
+  - trs_id: "https://dockstore.org/api/ga4gh/trs/v2/tools/#workflow/github.com/iwc-workflows/chipseq-pe/main/versions/v0.12"
+    type: "TRANSCRIPTOMICS"
+    description: "Analyze bulk or single-cell RNA seq data using a variety of approaches."
+    ploidy: "any"
+
+  - trs_id: "https://dockstore.org/api/ga4gh/trs/v2/tools/#workflow/github.com/iwc-workflows/haploid-variant-calling-wgs-pe/main/versions/v0.1"
+    type: "VARIANT_CALLING"
+    description: "Identify nucleotide polymorphisms and short indels from Illumina and Element data."
+    ploidy: "haploid"