Fix name and a couple bugs in transit model notebook

feder-observatory · Dec 1, 2024 · a7030a3 · a7030a3
1 parent 0ca7260
commit a7030a3
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Showing 2 changed files with 13 additions and 3 deletions.
diff --git a/.jp_app_launcher_stellarphot.yaml b/.jp_app_launcher_stellarphot.yaml
@@ -54,7 +54,7 @@
 
 - title: Initial exoplanet model
   description: Do an initial fit to a transit
-  source: ../stellarphot/tess-intial-model-fit.ipynb
+  source: ../stellarphot/tess-initial-model-fit.ipynb
   icon: ../stellarphot/stellarphot-logo.svg
   cwd: not_used
   type: notebook

diff --git a/...hot/notebooks/tess-intial-model-fit.ipynb → ...ot/notebooks/tess-initial-model-fit.ipynb b/...hot/notebooks/tess-intial-model-fit.ipynb → ...ot/notebooks/tess-initial-model-fit.ipynb
@@ -69,6 +69,16 @@
     "### Get just the target star and some information about it"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "if np.isnan(inp_photometry['bjd']).all():\n",
+    "    inp_photometry.add_bjd_col()\n"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": null,
@@ -198,7 +208,7 @@
     "binned2 = aggregate_downsample(ts2, time_bin_size=model_options.bin_size * u.min, aggregate_func=add_quad)\n",
     "\n",
     "binned[\"normalized_flux_error\"] = binned2[\"normalized_flux_error\"]\n",
-    "# binned_time = BinnedTimeSeries(photometry['bjd'], time_bin_start=first_time, time_bin_end=last_time, time_bin_size=bin_size)"
+    "binned = binned[~np.isnan(binned[\"normalized_flux\"])]"
    ]
   },
   {
@@ -389,7 +399,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.8"
+   "version": "3.11.9"
   }
  },
  "nbformat": 4,