Skip to content
@epi2me-labs

EPI2ME Labs

Bioinformatics resources from Oxford Nanopore Technologies Plc

Pinned Loading

  1. kraken2-server kraken2-server Public

    Kraken2 Server

    C++ 21 3

  2. wf-transcriptomes wf-transcriptomes Public

    Nextflow 83 34

  3. wf-single-cell wf-single-cell Public

    Python 79 41

  4. wf-bacterial-genomes wf-bacterial-genomes Public

    Small variant calling for haploid samples

    Python 28 13

  5. wf-human-variation wf-human-variation Public

    Nextflow 110 50

  6. fastcat fastcat Public

    Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.

    C 33 4

Repositories

Showing 10 of 36 repositories
  • epi2me-labs.github.io Public
    epi2me-labs/epi2me-labs.github.io’s past year of commit activity
    HTML 8 2 0 0 Updated Jan 23, 2025
  • wf-cas9 Public
    epi2me-labs/wf-cas9’s past year of commit activity
    Nextflow 6 2 3 0 Updated Jan 23, 2025
  • wf-clone-validation Public
    epi2me-labs/wf-clone-validation’s past year of commit activity
    Python 28 21 6 0 Updated Jan 22, 2025
  • wf-single-cell Public
    epi2me-labs/wf-single-cell’s past year of commit activity
    Python 79 41 12 0 Updated Jan 22, 2025
  • wf-metagenomics Public

    Metagenomic classification of long-read sequencing data

    epi2me-labs/wf-metagenomics’s past year of commit activity
    Python 71 24 5 0 Updated Jan 21, 2025
  • wf-aav-qc Public
    epi2me-labs/wf-aav-qc’s past year of commit activity
    Python 5 8 7 0 Updated Jan 20, 2025
  • wf-mpx Public
    epi2me-labs/wf-mpx’s past year of commit activity
    Nextflow 4 6 1 0 Updated Jan 17, 2025
  • wf-template Public

    Nextflow workflow template repository

    epi2me-labs/wf-template’s past year of commit activity
    Python 17 33 2 1 Updated Jan 10, 2025
  • epi2me-docs Public
    epi2me-labs/epi2me-docs’s past year of commit activity
    HTML 0 0 0 0 Updated Jan 7, 2025
  • wf-transcriptomes Public
    epi2me-labs/wf-transcriptomes’s past year of commit activity
    Nextflow 83 34 16 0 Updated Jan 3, 2025
View all repositories

Most used topics

Loading…