Review test matrix; test vs. h5py>=3.8.0 #952
Workflow file for this run
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| name: Tests | |
| on: [push, pull_request] | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ['3.9', '3.10', '3.11', '3.12', '3.13'] | |
| numpy-version: ['latest'] | |
| ndindex-version: ['latest'] | |
| h5py-version: ['latest'] | |
| include: | |
| - python-version: '3.9' | |
| numpy-version: '1.24.4' | |
| ndindex-version: '1.5.1' | |
| h5py-version: '3.3.0' | |
| - python-version: '3.11' # numpy 1.24.4 has wheels up to Python 3.11 | |
| numpy-version: '1.24.4' | |
| ndindex-version: 'latest' | |
| h5py-version: 'latest' | |
| - python-version: '3.13' | |
| numpy-version: 'latest' | |
| ndindex-version: 'latest' | |
| h5py-version: 'dev' | |
| fail-fast: false | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install native dependencies | |
| run: | | |
| sudo apt update -y | |
| sudo apt install -y hdf5-tools libhdf5-dev mpi-default-dev | |
| - name: Install target numpy version | |
| if: matrix.numpy-version != 'latest' | |
| run: pip install numpy~=${{ matrix.numpy-version }} | |
| - name: Install target ndindex version | |
| if: matrix.ndindex-version != 'latest' | |
| run: pip install ndindex~=${{ matrix.ndindex-version }} | |
| - name: Install latest h5py version | |
| if: matrix.h5py-version == 'latest' | |
| run: | | |
| # Build against system-wide libhdf5 | |
| pip install h5py --no-binary :all: | |
| - name: Install target h5py version | |
| if: matrix.h5py-version != 'latest' && matrix.h5py-version != 'dev' | |
| run: | | |
| # Build against system-wide libhdf5 | |
| pip install h5py~=${{ matrix.h5py-version }} --no-binary :all: | |
| - name: Install development h5py version | |
| if: matrix.h5py-version == 'dev' | |
| run: pip install git+https://github.com/h5py/h5py | |
| - name: Install versioned-hdf5 | |
| run: pip install . | |
| - name: Install versioned-hdf5 test packages and extra h5py compression types | |
| run: | | |
| pip install .[test] | |
| pip install hdf5plugin tables | |
| - name: Dump pip environment | |
| run: pip list | |
| - name: Print hdf5 configuration | |
| run: | | |
| python -c 'import utils; utils.debug_libhdf5_so()' | |
| h5cc -showconfig | |
| - name: Run Tests | |
| run: pytest -v . |