Update to v4

danforthcenter · Oct 2, 2023 · c565398 · c565398
1 parent d613523
commit c565398
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Showing 10 changed files with 411 additions and 108 deletions.
diff --git a/SCALE_20x_1201_C_WT_4_001_mask.png b/SCALE_20x_1201_C_WT_4_001_mask.png
diff --git a/example_results_oneimage_file.csv b/example_results_oneimage_file.csv
@@ -0,0 +1 @@
+sample,trait,value,label
diff --git a/imgs/SCALE_20x_1201_C_HLP_3_002.tif b/imgs/SCALE_20x_1201_C_HLP_3_002.tif
diff --git a/imgs/SCALE_20x_1201_C_WT_4_001.tif b/imgs/SCALE_20x_1201_C_WT_4_001.tif
diff --git a/imgs/SCALE_20x_1201_H_HLP_7_002.tif b/imgs/SCALE_20x_1201_H_HLP_7_002.tif
diff --git a/imgs/SCALE_20x_1201_H_WT_8_001.tif b/imgs/SCALE_20x_1201_H_WT_8_001.tif
diff --git a/imgs/SCALE_20x_1201_H_WT_8_002.tif b/imgs/SCALE_20x_1201_H_WT_8_002.tif
diff --git a/index.ipynb b/index.ipynb
diff --git a/postBuild b/postBuild
diff --git a/requirements.txt b/requirements.txt
@@ -1 +1,13 @@
+plantcv==4.0.1
+matplotlib>=1.5
+numpy>=1.11
+pandas
+python-dateutil
+scipy
+scikit-image>=0.13
+scikit-learn
+plotnine
+dask
+dask-jobqueue
+opencv-python<4, >=3.4plantcv==3.12.1
 ipympl