Merge pull request #178 from sarah872/master

Update metaphlan2krona.py
biobakery · Jul 20, 2022 · 4e8f573 · 4e8f573
2 parents 5c3f386 + bf471e4
commit 4e8f573
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/metaphlan/utils/metaphlan2krona.py b/metaphlan/utils/metaphlan2krona.py
@@ -39,7 +39,7 @@ def main():
 
             x_cells = x.split('\t')
             lineage = '\t'.join(x_cells[0:(len(x_cells) -1)])
-            abundance = float(x_cells[-1].rstrip('\n')) 
+            abundance = float(x_cells[-2].rstrip('\n')) 
 
             metaPhLan_FH.write('%s\n'%(str(abundance) + '\t' + lineage))