Update with master changes #326
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Update cluster assign to write qcreport on qc failiures
- move to assign_cluster_hdf5 - writes to qc report and combines with qc run with with dist matrix
Move call of sketchlibAssemblyQC in query assign
Adds explanation of potential differences in results with and without --update-db
Adds description of --update-db differences
Moves update-db explanation
Adds link to troubleshooting
Docs update
Replaced deprecated 'rU' with 'r' to make this work on recent python
Made this mistake before, it copies the same set
PopPUNK 2.7.0 candidate
Version, authors
Fix External Clusters csv being duplicated
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