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1174 Use DIVI data to scale initial values for LCT model #1175

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@lenaploetzke lenaploetzke commented Jan 8, 2025

Changes and Information

Please briefly list the changes (main added features, changed items, or corrected bugs) made:

  • Method to calculate an initial value vector for an LCT model using reported RKI data now provides the option to scale the result so that the number of ICU patients equals the reported number in the DIVI data set.
  • Added tests.

If need be, add additional information and what the reviewer should look out for in particular:

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  • New code adheres to coding guidelines
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  • Tests are added for new functionality and a local test run was successful (with and without OpenMP)
  • Appropriate documentation for new functionality has been added (Doxygen in the code and Markdown files if necessary)
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  • Corresponding issue(s) is/are linked and addressed
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  • No large data files added in the whole history of commits(files should in sum not exceed 100 KB, avoid PDFs, Word docs, etc.)
  • On merge, add 2-5 lines with the changes (main added features, changed items, or corrected bugs) to the merge-commit-message. This can be taken from the briefly-list-the-changes above (best case) or the separate commit messages (worst case).

Closes #1174 .

@lenaploetzke lenaploetzke self-assigned this Jan 8, 2025
@lenaploetzke lenaploetzke linked an issue Jan 8, 2025 that may be closed by this pull request
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codecov bot commented Jan 8, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.98%. Comparing base (0c4965a) to head (286820e).

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #1175      +/-   ##
==========================================
+ Coverage   96.97%   96.98%   +0.01%     
==========================================
  Files         148      148              
  Lines       13718    13779      +61     
==========================================
+ Hits        13303    13364      +61     
  Misses        415      415              

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@lenaploetzke lenaploetzke mentioned this pull request Jan 9, 2025
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Use DIVI data to scale initial values for LCT model
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