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Single stranded sample name change in eager processing #8

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TCLamnidis opened this issue Aug 12, 2022 · 1 comment

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TCLamnidis commented Aug 12, 2022

Attach a suffix to the sample name of single stranded libraries so the statistics of ds and ssDNA libs are kept completely separate.

Collaborator Author

TCLamnidis commented Aug 15, 2022 •

edited

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This will potentially require some downstream changes.

eager TSV generation with _ss suffix for Sample_ID for single strand data.
- Added the suffix to the Library_ID as well, so sorting of the stats table happens correctly in MQC report.
merging of both genotype datasets from eager into one merged dataset
Poseidon package creation using merged dataset
populating the janno file with information based on the ss and ds data accordingly for each sample

TCLamnidis mentioned this issue

ToDo list for next update #13

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18 tasks

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