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Added echo for more prints
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furniturewalatkNIH authored Apr 16, 2024
1 parent 59b9214 commit 4919334
Showing 1 changed file with 8 additions and 1 deletion.
9 changes: 8 additions & 1 deletion .github/workflows/check-jupyter.yml
Original file line number Diff line number Diff line change
Expand Up @@ -23,16 +23,23 @@ jobs:

- name: Check - Install dependencies
run: |
echo -e "\n\n ---------------- Doing install of pip BELOW ---- \n"
python -m pip install --upgrade pip
echo -e "\n\n ------- Doing pip install of jupyter BELOW ----\n"
pip install jupyter nbformat nbconvert
echo -e "\n\n ------- Doing install of R BELOW ----- \n"
sudo apt install r-base r-base-dev -y
R
echo -e "\n\n -------- Starting R BELOW ----- \n"
R --vanilla
echo -e "\n\n ------ Doing install of IRkernel BELOW --- \n"
install.packages('IRkernel')
IRkernel::installspec()
echo -e "\n\n ------- Listing the kernels installed BELOW ----\n"
jupyter kernelspec list
- name: Execute Notebooks
run: |
echo -e "\n\n\n\n -------- Finding and checking the Jupyter notebooks BELOW ----- \n\n"
find tutorials/notebooks/* -name '*.ipynb' -exec jupyter nbconvert --to notebook --execute {} +
- name: Check for errors
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