more update.sh

update_scripts/upcoming/update.sh

@@ -22,10 +22,7 @@ chown -R pioreactor:www-data $DB*
 chmod -R 770 $DB*
 
 # 2. make a calibration dir in all pioreactors
-sudo -u pioreactor mkdir -p "$STORAGE_DIR"/calibrations/od
-sudo -u pioreactor mkdir -p "$STORAGE_DIR"/calibrations/media_pump
-sudo -u pioreactor mkdir -p "$STORAGE_DIR"/calibrations/waste_pump
-sudo -u pioreactor mkdir -p "$STORAGE_DIR"/calibrations/alt_media_pump
+sudo -u pioreactor mkdir -p "$STORAGE_DIR"/calibrations/{od,media_pump,waste_pump,alt_media_pump}
 
 # 3. install pyyaml (only leader has it, but workers need it now)
 sudo pip3 install "$SCRIPT_DIR"/PyYAML-6.0.2-cp311-cp311-linux_armv7l.whl
@@ -37,7 +34,7 @@ sudo bash /usr/local/bin/create_diskcache.sh
 # 5. replace old calibrations with new yaml files. This doesn't delete old calibrations
 sudo -u pioreactor python "$SCRIPT_DIR"/cal_convert.py "$STORAGE_DIR"/od_calibrations/cache.db
 sudo -u pioreactor python "$SCRIPT_DIR"/cal_convert.py "$STORAGE_DIR"/pump_calibrations/cache.db
-chown -R pioreactor:pioreactor "$STORAGE_DIR"/calibrations/*/*.yaml
+chown -R pioreactor:pioreactor "$STORAGE_DIR"/calibrations/
 
 sudo -u pioreactor python "$SCRIPT_DIR"/cal_active.py "$STORAGE_DIR"/current_pump_calibrations/cache.db
 sudo -u pioreactor python "$SCRIPT_DIR"/cal_active.py "$STORAGE_DIR"/current_od_calibrations/cache.db
@@ -48,16 +45,9 @@ if [ "$HOSTNAME" = "$LEADER_HOSTNAME" ]; then
     # 6. remove calibrations dataset file
     rm -f /home/pioreactor/.pioreactor/exportable_datasets/*calibrations.yaml
 
-
     # 7. fix any bad pioreactor start up systemd services
     rm -f  /usr/lib/systemd/system/[email protected]
     cp  "$SCRIPT_DIR"/[email protected] /etc/systemd/system/
     echo "application/yaml               yaml yml" | sudo tee -a /etc/mime.types
 
-    # 8. add new config entries
-    crudini  --set /home/pioreactor/.pioreactor/config.ini storage temporary_cache /tmp/pioreactor_cache/local_intermittent_pioreactor_metadata.sqlite \
-             --set /home/pioreactor/.pioreactor/config.ini storage persistent_cache /home/pioreactor/.pioreactor/storage/local_persistent_pioreactor_metadata.sqlite
-
-    sudo -u pioreactor pios sync-configs --shared || :
-
 fi