change uniprot batch size

PRIDE-Archive · Dec 6, 2023 · 08ee2c6 · 08ee2c6
1 parent 32ff80a
commit 08ee2c6
Show file tree

Hide file tree

Showing 2 changed files with 1 addition and 2 deletions.
diff --git a/.kubernetes.yml b/.kubernetes.yml
@@ -81,4 +81,3 @@ spec:
       protocol: TCP
       targetPort: http
   type: ClusterIP
-#  type: NodePort
diff --git a/app/routes/pride.py b/app/routes/pride.py
@@ -645,7 +645,7 @@ async def update_protein_metadata(list_of_project_sub_details):
 
 async def find_uniprot_data(list_of_project_sub_details):
     i = 1
-    batch_size = 10
+    batch_size = 4
     base_in_URL = "https://rest.uniprot.org/uniprotkb/search?query=accession:"
     fields_in_URL = "&fields=protein_name,gene_primary&size=50"
     seperator = "%20OR%20"