Make full release

patterns/definitions.owl

@@ -7,8 +7,8 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/phipo/patterns/definitions.owl>
-<http://purl.obolibrary.org/obo/phipo/releases/2023-07-06/patterns/definitions.owl>
-Annotation(owl:versionInfo "2023-07-06")
+<http://purl.obolibrary.org/obo/phipo/releases/2023-08-03/patterns/definitions.owl>
+Annotation(owl:versionInfo "2023-08-03")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/CARO_0010004>))
 Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_100147>))

phipo-base.obo

@@ -1,13 +1,13 @@
 format-version: 1.2
-data-version: phipo/releases/2023-07-06/phipo-base.owl
+data-version: phipo/releases/2023-08-03/phipo-base.owl
 ontology: phipo/phipo-base
 property_value: created:by "alaynecuzick" xsd:string
 property_value: creation:date "2018-07-09T13:43:00Z" xsd:string
 property_value: http://purl.org/dc/elements/1.1/description "Ontology of species-neutral phenotypes observed in pathogen-host interactions." xsd:string
 property_value: http://purl.org/dc/elements/1.1/title "Pathogen Host Interactions Phenotype Ontology" xsd:string
 property_value: http://purl.org/dc/elements/1.1/type IAO:8000001
 property_value: http://purl.org/dc/terms/license "https://creativecommons.org/licenses/by/3.0/" xsd:string
-property_value: owl:versionInfo "2023-07-06" xsd:string
+property_value: owl:versionInfo "2023-08-03" xsd:string
 
 [Term]
 id: PHIPO:0000001
@@ -10792,7 +10792,7 @@ id: PHIPO:0001219
 name: normal growth on voriconazole
 namespace: single_species_phenotype
 def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to voriconazole (i.e. indistinguishable from wild type)." []
-is_a: PHIPO:0001218 ! chemical phenotype
+is_a: PHIPO:0001308 ! normal growth on chemical
 created_by: alaynecuzick
 creation_date: 2020-12-08T15:43:45Z
 
@@ -11461,7 +11461,7 @@ id: PHIPO:0001287
 name: normal growth on tolnaftate
 namespace: single_species_phenotype
 def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to tolnaftate (i.e. indistinguishable from wild type)." []
-is_a: PHIPO:0001218 ! chemical phenotype
+is_a: PHIPO:0001308 ! normal growth on chemical
 created_by: alaynecuzick
 creation_date: 2023-06-12T08:49:10Z
 
@@ -11488,7 +11488,7 @@ id: PHIPO:0001290
 name: normal growth on azoxystrobin
 namespace: single_species_phenotype
 def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to azoxystrobin (i.e. indistinguishable from wild type)." []
-is_a: PHIPO:0001218 ! chemical phenotype
+is_a: PHIPO:0001308 ! normal growth on chemical
 created_by: alaynecuzick
 creation_date: 2023-06-12T09:21:50Z
 
@@ -11515,7 +11515,7 @@ id: PHIPO:0001293
 name: normal growth on fenpicoxamid
 namespace: single_species_phenotype
 def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to fenpicoxamid (i.e. indistinguishable from wild type)." []
-is_a: PHIPO:0001218 ! chemical phenotype
+is_a: PHIPO:0001308 ! normal growth on chemical
 created_by: alaynecuzick
 creation_date: 2023-06-12T09:41:30Z
 
@@ -11560,7 +11560,7 @@ id: PHIPO:0001298
 name: normal growth on arborcandin C
 namespace: single_species_phenotype
 def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to arborcandin C (i.e. indistinguishable from wild type)." []
-is_a: PHIPO:0001218 ! chemical phenotype
+is_a: PHIPO:0001308 ! normal growth on chemical
 created_by: alaynecuzick
 creation_date: 2023-06-21T11:35:28Z
 
@@ -11569,7 +11569,7 @@ id: PHIPO:0001299
 name: normal growth on pyrrolnitrin
 namespace: single_species_phenotype
 def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to pyrrolnitrin (i.e. indistinguishable from wild type)." []
-is_a: PHIPO:0001218 ! chemical phenotype
+is_a: PHIPO:0001308 ! normal growth on chemical
 created_by: alaynecuzick
 creation_date: 2023-06-27T13:33:13Z
 
@@ -11657,6 +11657,150 @@ is_a: PHIPO:0001303 ! sensitive to osmotic stress
 created_by: alaynecuzick
 creation_date: 2023-06-30T13:00:44Z
 
+[Term]
+id: PHIPO:0001308
+name: normal growth on chemical
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to a specific chemical (i.e. indistinguishable from wild type)." []
+is_a: PHIPO:0001218 ! chemical phenotype
+created_by: alaynecuzick
+creation_date: 2023-07-21T15:06:54Z
+
+[Term]
+id: PHIPO:0001309
+name: normal growth on benomyl
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to benomyl (i.e. indistinguishable from wild type)." []
+is_a: PHIPO:0001308 ! normal growth on chemical
+created_by: alaynecuzick
+creation_date: 2023-07-21T15:13:15Z
+
+[Term]
+id: PHIPO:0001310
+name: normal growth on carbendazim
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to carbendazim (i.e. indistinguishable from wild type)." []
+is_a: PHIPO:0001308 ! normal growth on chemical
+created_by: alaynecuzick
+creation_date: 2023-07-21T15:16:51Z
+
+[Term]
+id: PHIPO:0001311
+name: normal growth on chlorothalonil
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to chlorothalonil (i.e. indistinguishable from wild type)." []
+is_a: PHIPO:0001308 ! normal growth on chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T16:52:35Z
+
+[Term]
+id: PHIPO:0001312
+name: normal growth on zoxamide
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to zoxamide (i.e. indistinguishable from wild type)." []
+is_a: PHIPO:0001308 ! normal growth on chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T16:56:31Z
+
+[Term]
+id: PHIPO:0001313
+name: resistance to zoxamide
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the resistance of individuals or populations after exposure to zoxamide. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
+is_a: PHIPO:0000022 ! increased resistance to chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:00:21Z
+
+[Term]
+id: PHIPO:0001314
+name: sensitive to zoxamide
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to zoxamide. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
+is_a: PHIPO:0000021 ! increased sensitivity to chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:03:39Z
+
+[Term]
+id: PHIPO:0001315
+name: normal growth on cymoxanil
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to cymoxanil (i.e. indistinguishable from wild type)." []
+is_a: PHIPO:0001308 ! normal growth on chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:08:04Z
+
+[Term]
+id: PHIPO:0001316
+name: resistance to cymoxanil
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the resistance of individuals or populations after exposure to cymoxanil. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
+is_a: PHIPO:0000022 ! increased resistance to chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:10:17Z
+
+[Term]
+id: PHIPO:0001317
+name: sensitive to cymoxanil
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to cymoxanil. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
+is_a: PHIPO:0000021 ! increased sensitivity to chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:12:34Z
+
+[Term]
+id: PHIPO:0001318
+name: normal growth on metalaxyl
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to metalaxyl (i.e. indistinguishable from wild type)." []
+is_a: PHIPO:0001308 ! normal growth on chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:43:33Z
+
+[Term]
+id: PHIPO:0001319
+name: resistance to metalaxyl
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the resistance of individuals or populations after exposure to metalaxyl. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
+is_a: PHIPO:0000022 ! increased resistance to chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:45:42Z
+
+[Term]
+id: PHIPO:0001320
+name: sensitive to metalaxyl
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to metalaxyl. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
+is_a: PHIPO:0000021 ! increased sensitivity to chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:47:59Z
+
+[Term]
+id: PHIPO:0001321
+name: normal growth on flumorph
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to flumorph (i.e. indistinguishable from wild type)." []
+is_a: PHIPO:0001308 ! normal growth on chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:50:56Z
+
+[Term]
+id: PHIPO:0001322
+name: resistance to flumorph
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the resistance of individuals or populations after exposure to flumorph. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
+is_a: PHIPO:0000022 ! increased resistance to chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:53:00Z
+
+[Term]
+id: PHIPO:0001323
+name: sensitive to flumorph
+namespace: single_species_phenotype
+def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to flumorph. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
+is_a: PHIPO:0000021 ! increased sensitivity to chemical
+created_by: alaynecuzick
+creation_date: 2023-08-02T17:55:02Z
+
 [Typedef]
 id: PHIPO:0000304
 name: qualifier