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Make full release
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@jseager7
jseager7 committed Oct 11, 2023
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4 changes: 2 additions & 2 deletions patterns/definitions.owl
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Expand Up @@ -7,8 +7,8 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)


Ontology(<http://purl.obolibrary.org/obo/phipo/patterns/definitions.owl>
<http://purl.obolibrary.org/obo/phipo/releases/2023-09-07/patterns/definitions.owl>
Annotation(owl:versionInfo "2023-09-07")
<http://purl.obolibrary.org/obo/phipo/releases/2023-10-11/patterns/definitions.owl>
Annotation(owl:versionInfo "2023-10-11")

Declaration(Class(<http://purl.obolibrary.org/obo/CARO_0010004>))
Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_100147>))
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468 changes: 466 additions & 2 deletions phipo-base.json
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185 changes: 183 additions & 2 deletions phipo-base.obo
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@@ -1,13 +1,13 @@
format-version: 1.2
data-version: phipo/releases/2023-09-07/phipo-base.owl
data-version: phipo/releases/2023-10-11/phipo-base.owl
ontology: phipo/phipo-base
property_value: created:by "alaynecuzick" xsd:string
property_value: creation:date "2018-07-09T13:43:00Z" xsd:string
property_value: http://purl.org/dc/elements/1.1/description "Ontology of species-neutral phenotypes observed in pathogen-host interactions." xsd:string
property_value: http://purl.org/dc/elements/1.1/title "Pathogen Host Interactions Phenotype Ontology" xsd:string
property_value: http://purl.org/dc/elements/1.1/type IAO:8000001
property_value: http://purl.org/dc/terms/license "https://creativecommons.org/licenses/by/3.0/" xsd:string
property_value: owl:versionInfo "2023-09-07" xsd:string
property_value: owl:versionInfo "2023-10-11" xsd:string

[Term]
id: PHIPO:0000001
Expand Down Expand Up @@ -12062,6 +12062,187 @@ is_a: PHIPO:0001308 ! normal growth on chemical
created_by: alaynecuzick
creation_date: 2023-09-06T14:01:34Z

[Term]
id: PHIPO:0001353
name: resistance to prothioconazole
namespace: single_species_phenotype
def: "A growth phenotype which describes the resistance of individuals or populations after exposure to prothioconazole. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
is_a: PHIPO:0000022 ! increased resistance to chemical
created_by: alaynecuzick
creation_date: 2023-09-11T11:50:04Z

[Term]
id: PHIPO:0001354
name: sensitive to prothioconazole
namespace: single_species_phenotype
def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to prothioconazole. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
is_a: PHIPO:0000021 ! increased sensitivity to chemical
created_by: alaynecuzick
creation_date: 2023-09-11T11:50:04Z

[Term]
id: PHIPO:0001355
name: normal growth on prothioconazole
namespace: single_species_phenotype
def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to prothioconazole (i.e. indistinguishable from wild type)." []
is_a: PHIPO:0001308 ! normal growth on chemical
created_by: alaynecuzick
creation_date: 2023-09-11T11:50:04Z

[Term]
id: PHIPO:0001356
name: resistance to fluopyram
namespace: single_species_phenotype
def: "A growth phenotype which describes the resistance of individuals or populations after exposure to fluopyram. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
is_a: PHIPO:0000022 ! increased resistance to chemical
created_by: alaynecuzick
creation_date: 2023-09-27T09:40:25Z

[Term]
id: PHIPO:0001357
name: sensitive to fluopyram
namespace: single_species_phenotype
def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to fluopyram. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
is_a: PHIPO:0000021 ! increased sensitivity to chemical
created_by: alaynecuzick
creation_date: 2023-09-27T09:40:25Z

[Term]
id: PHIPO:0001358
name: normal growth on fluopyram
namespace: single_species_phenotype
def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to fluopyram (i.e. indistinguishable from wild type)." []
is_a: PHIPO:0001308 ! normal growth on chemical
created_by: alaynecuzick
creation_date: 2023-09-27T09:40:25Z

[Term]
id: PHIPO:0001359
name: resistance to kresoxim-methyl
namespace: single_species_phenotype
def: "A growth phenotype which describes the resistance of individuals or populations after exposure to kresoxim-methyl. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
is_a: PHIPO:0000022 ! increased resistance to chemical
created_by: alaynecuzick
creation_date: 2023-09-28T11:07:02Z

[Term]
id: PHIPO:0001360
name: sensitive to kresoxim-methyl
namespace: single_species_phenotype
def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to kresoxim-methyl. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
is_a: PHIPO:0000021 ! increased sensitivity to chemical
created_by: alaynecuzick
creation_date: 2023-09-28T11:07:02Z

[Term]
id: PHIPO:0001361
name: normal growth on kresoxim-methyl
namespace: single_species_phenotype
def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to kresoxim-methyl (i.e. indistinguishable from wild type)." []
is_a: PHIPO:0001308 ! normal growth on chemical
created_by: alaynecuzick
creation_date: 2023-09-28T11:07:02Z

[Term]
id: PHIPO:0001362
name: resistance to isopyrazam
namespace: single_species_phenotype
def: "A growth phenotype which describes the resistance of individuals or populations after exposure to isopyrazam. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
is_a: PHIPO:0000022 ! increased resistance to chemical
created_by: alaynecuzick
creation_date: 2023-10-02T14:15:15Z

[Term]
id: PHIPO:0001363
name: sensitive to isopyrazam
namespace: single_species_phenotype
def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to isopyrazam. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
is_a: PHIPO:0000021 ! increased sensitivity to chemical
created_by: alaynecuzick
creation_date: 2023-10-02T14:15:15Z

[Term]
id: PHIPO:0001364
name: normal growth on isopyrazam
namespace: single_species_phenotype
def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to isopyrazam (i.e. indistinguishable from wild type)." []
is_a: PHIPO:0001308 ! normal growth on chemical
created_by: alaynecuzick
creation_date: 2023-10-02T14:15:15Z

[Term]
id: PHIPO:0001365
name: resistance to bixafen
namespace: single_species_phenotype
def: "A growth phenotype which describes the resistance of individuals or populations after exposure to bixafen. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
is_a: PHIPO:0000022 ! increased resistance to chemical
created_by: alaynecuzick
creation_date: 2023-10-02T14:15:15Z

[Term]
id: PHIPO:0001366
name: sensitive to bixafen
namespace: single_species_phenotype
def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to bixafen. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
is_a: PHIPO:0000021 ! increased sensitivity to chemical
created_by: alaynecuzick
creation_date: 2023-10-02T14:15:15Z

[Term]
id: PHIPO:0001367
name: normal growth on bixafen
namespace: single_species_phenotype
def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to bixafen (i.e. indistinguishable from wild type)." []
is_a: PHIPO:0001308 ! normal growth on chemical
created_by: alaynecuzick
creation_date: 2023-10-02T14:15:15Z

[Term]
id: PHIPO:0001368
name: normal growth on carboxin
namespace: single_species_phenotype
def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to carboxin (i.e. indistinguishable from wild type)." []
is_a: PHIPO:0001308 ! normal growth on chemical
created_by: alaynecuzick
creation_date: 2023-10-02T14:15:15Z

[Term]
id: PHIPO:0001369
name: increased rate of hyphae formation
namespace: single_species_phenotype
def: "An individual organism growth phenotype in which the rate, or speed, of hyphae formation is increased." []
synonym: "fast hyphae formation" EXACT []
is_a: PHIPO:0001234 ! increased hyphal growth
created_by: alaynecuzick
creation_date: 2023-10-09T12:23:25Z

[Term]
id: PHIPO:0001370
name: resistance to pyrimorph
namespace: single_species_phenotype
def: "A growth phenotype which describes the resistance of individuals or populations after exposure to pyrimorph. Typically, organisms are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type individuals or populations to grow." []
is_a: PHIPO:0000022 ! increased resistance to chemical
created_by: alaynecuzick
creation_date: 2023-10-10T15:36:59Z

[Term]
id: PHIPO:0001371
name: sensitive to pyrimorph
namespace: single_species_phenotype
def: "A growth phenotype which describes the sensitivity of individuals or populations after exposure to pyrimorph. Typically, organisms are deemed sensitive to a chemical if they stop growing (and may die) at a concentration of the chemical that allows wild type individuals or populations to grow." []
is_a: PHIPO:0000021 ! increased sensitivity to chemical
created_by: alaynecuzick
creation_date: 2023-10-10T15:36:59Z

[Term]
id: PHIPO:0001372
name: normal growth on pyrimorph
namespace: single_species_phenotype
def: "A growth phenotype which describes the absence of change of individuals or populations after exposure to pyrimorph (i.e. indistinguishable from wild type)." []
is_a: PHIPO:0001308 ! normal growth on chemical
created_by: alaynecuzick
creation_date: 2023-10-10T15:36:59Z

[Typedef]
id: PHIPO:0000304
name: qualifier
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