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python312Packages.tskit: 0.5.8 -> 0.6.0 #359358

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merged 1 commit into from
Nov 29, 2024

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r-ryantm
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Automatic update generated by nixpkgs-update tools. This update was made based on information from passthru.updateScript.

meta.description for python312Packages.tskit is: Tree sequence toolkit

meta.homepage for python312Packages.tskit is: https://github.com/tskit-dev/tskit

Updates performed
  • Ran passthru.UpdateScript
To inspect upstream changes
Impact

Checks done


  • built on NixOS
  • The tests defined in passthru.tests, if any, passed
  • found 0.6.0 with grep in /nix/store/91hshdbj9mgds2khl94m3i905sz5r7mb-python3.12-tskit-0.6.0
  • found 0.6.0 in filename of file in /nix/store/91hshdbj9mgds2khl94m3i905sz5r7mb-python3.12-tskit-0.6.0

Rebuild report (if merged into master) (click to expand)
7 total rebuild path(s)

7 package rebuild(s)

First fifty rebuilds by attrpath

python311Packages.msprime
python311Packages.pyslim
python311Packages.tskit
python312Packages.msprime
python312Packages.pyslim
python312Packages.tskit
Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/91hshdbj9mgds2khl94m3i905sz5r7mb-python3.12-tskit-0.6.0 \
  --option binary-caches 'https://cache.nixos.org/ https://nix-community.cachix.org/' \
  --option trusted-public-keys '
  nix-community.cachix.org-1:mB9FSh9qf2dCimDSUo8Zy7bkq5CX+/rkCWyvRCYg3Fs=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(The Cachix cache is only trusted for this store-path realization.)
For the Cachix download to work, your user must be in the trusted-users list or you can use sudo since root is effectively trusted.

Or, build yourself:

nix-build -A python312Packages.tskit https://github.com/r-ryantm/nixpkgs/archive/8af60309bad9122ef8076a1c723fa131593e8de4.tar.gz

Or:

nix build github:r-ryantm/nixpkgs/8af60309bad9122ef8076a1c723fa131593e8de4#python312Packages.tskit

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/91hshdbj9mgds2khl94m3i905sz5r7mb-python3.12-tskit-0.6.0
ls -la /nix/store/91hshdbj9mgds2khl94m3i905sz5r7mb-python3.12-tskit-0.6.0/bin


Pre-merge build results

We have automatically built all packages that will get rebuilt due to
this change.

This gives evidence on whether the upgrade will break dependent packages.
Note sometimes packages show up as failed to build independent of the
change, simply because they are already broken on the target branch.

nixpkgs-review result

Generated using nixpkgs-review.

Command: nixpkgs-review


x86_64-linux

✅ 12 packages built:
  • python311Packages.msprime
  • python311Packages.msprime.dist
  • python311Packages.pyslim
  • python311Packages.pyslim.dist
  • python311Packages.tskit
  • python311Packages.tskit.dist
  • python312Packages.msprime
  • python312Packages.msprime.dist
  • python312Packages.pyslim
  • python312Packages.pyslim.dist
  • python312Packages.tskit
  • python312Packages.tskit.dist

Maintainer pings

cc @alxsimon for testing.

Tip

As a maintainer, if your package is located under pkgs/by-name/*, you can comment @NixOS/nixpkgs-merge-bot merge to automatically merge this update using the nixpkgs-merge-bot.


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@wegank wegank added 12.approvals: 1 This PR was reviewed and approved by one reputable person 12.approved-by: package-maintainer This PR was reviewed and approved by a maintainer listed in the package labels Nov 27, 2024
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wegank commented Nov 29, 2024

nixpkgs-review result

Generated using nixpkgs-review.

Command: nixpkgs-review pr 359358


aarch64-darwin

✅ 12 packages built:
  • python311Packages.msprime
  • python311Packages.msprime.dist
  • python311Packages.pyslim
  • python311Packages.pyslim.dist
  • python311Packages.tskit
  • python311Packages.tskit.dist
  • python312Packages.msprime
  • python312Packages.msprime.dist
  • python312Packages.pyslim
  • python312Packages.pyslim.dist
  • python312Packages.tskit
  • python312Packages.tskit.dist

@wegank wegank merged commit 0eac31b into NixOS:master Nov 29, 2024
37 of 38 checks passed
@r-ryantm r-ryantm deleted the auto-update/python312Packages.tskit branch November 30, 2024 00:18
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6.topic: python 10.rebuild-darwin: 1-10 10.rebuild-linux: 1-10 12.approvals: 1 This PR was reviewed and approved by one reputable person 12.approved-by: package-maintainer This PR was reviewed and approved by a maintainer listed in the package
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3 participants