fix aov - red tip label

Matthijnssenslab · Dec 19, 2023 · 750976b · 750976b
1 parent e370dca
commit 750976b
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diff --git a/data/trees/orthomyxo.acc2name b/data/trees/orthomyxo.acc2name
@@ -1,4 +1,4 @@
-Apisorthomyxovirus1	Apis orthomyxovirus 1
+Apisorthomyxovirus1	apis orthomyxovirus 1
 QGA69818.1	Varroa orthomyxovirus-1
 AED98371.1	Jos virus
 AHB34055.1	Upolu virus

diff --git a/scripts/fig1.R b/scripts/fig1.R
@@ -13,7 +13,7 @@ names(aov.a2n) <- aov.acc2name$V1
 #Orthomyxo
 orthotree <- read.tree("data/trees/orthomyxo.treefile")
 orthotree$tip.label <- as.character(aov.a2n[match(names(aov.a2n), orthotree$tip.label)])
-orthotree$tip.label[1] <- "Apis orthomyxovirus 1"
+orthotree$tip.label[1] <- "apis orthomyxovirus 1"
 
 #midpoint root
 orthotree <- phangorn::midpoint(orthotree)