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update colabfold submodule
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@dingquanyu
dingquanyu committed Nov 14, 2023
1 parent b9634be commit 3daccae
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion alphapulldown/ColabFold
Submodule ColabFold updated 24 files
+54 −0 .github/workflows/docker.yml
+25 −0 .github/workflows/publish.yml
+6 −5 AlphaFold2.ipynb
+18 −0 Dockerfile
+2 −2 ESMFold.ipynb
+70 −55 README.md
+0 −27 TemplateServer/README.md
+0 −226 TemplateServer/config.go
+0 −100 TemplateServer/dbreader.go
+0 −143 TemplateServer/decoder.go
+0 −13 TemplateServer/go.mod
+0 −43 TemplateServer/go.sum
+0 −259 TemplateServer/main.go
+8 −7 batch/AlphaFold2_batch.ipynb
+102 −0 beta/convert_256_to_384_rep.ipynb
+42 −14 beta/relax_amber.ipynb
+499 −267 colabfold/batch.py
+65 −163 colabfold/mmseqs/search.py
+108 −0 colabfold/relax.py
+4 −2 colabfold/utils.py
+2 −1 pyproject.toml
+18 −9 setup_databases.sh
+8 −0 tests/mock.py
+1 −0 tests/test_msa.py

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