add skip obsolete to ols config

EBISPOT · Aug 19, 2024 · aed56f8 · aed56f8
1 parent ffa2226
commit aed56f8
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/configs/datasource_configs/ols.json b/configs/datasource_configs/ols.json
@@ -6,7 +6,8 @@
             "ingest_files": ["/nfs/production/parkinso/spot/grebi/ontologies.json.gz"],
             "ingest_script": "./target/release/grebi_ingest_ols",
             "ingest_args": [
-                { "name": "--ontologies", "value": "efo,mp,hp,go,ro,iao,uberon,pato,oba,chebi,bspo,iao,obi,bfo,cob,cl,so,eco,pr,ncbitaxon,oio,iao,biolink,mondo,doid" }
+                { "name": "--ontologies", "value": "efo,mp,hp,go,ro,iao,uberon,pato,oba,chebi,bspo,iao,obi,bfo,cob,cl,so,eco,pr,ncbitaxon,oio,iao,biolink,mondo,doid" },
+                { "name": "--skip-obsolete", "value": "" }
             ]
         }
     ]