change test to use a smaller database

Delphine-L · Aug 15, 2024 · 443d70d · 443d70d
1 parent 7dc9798
commit 443d70d
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/...ows/VGP-assembly-v2/Assembly-decontamination-VGP9/Assembly-decontamination-VGP9-tests.yml b/...ows/VGP-assembly-v2/Assembly-decontamination-VGP9/Assembly-decontamination-VGP9-tests.yml
@@ -2,9 +2,9 @@
   job:
     Scaffolded assembly (fasta):
       class: File
-      location: https://zenodo.org/records/13326708/files/Scaffolded_assembly.fasta?download=1
+      location: https://zenodo.org/records/13327557/files/Scaffolded_assembly.fasta?download=1
       filetype: fasta
-    Database for Kraken2: k2_pluspf_20210517
+    Database for Kraken2: viral2019-03
   outputs:
     mito_scaff_names:
       asserts:
@@ -14,8 +14,8 @@
       decompress: true
       asserts:
         not_has_text: 
-          text: "scaffold_115"
+          text: "scaffold_200"
     contaminants_table:
       asserts:
         has_text: 
-          text: "SCAFFOLD_101"
+          text: "SCAFFOLD_200"