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Added stoppage criteria for max incorrect
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lawhead committed Sep 26, 2024
1 parent edf838b commit 5ffff7d
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Showing 5 changed files with 61 additions and 10 deletions.
19 changes: 19 additions & 0 deletions bcipy/helpers/task.py
Original file line number Diff line number Diff line change
Expand Up @@ -444,3 +444,22 @@ def generate_targets(alp, stim_number):
targets = [target for sublist in lists for target in sublist]

return targets


def consecutive_incorrect(target_text: str, spelled_text: str) -> int:
"""Function that computes the number of consecutive symbols that
are incorrectly spelled.
>>> consecutive_incorrect('WORLD', 'H')
1
>>> consecutive_incorrect('WORLD', 'W')
0
>>> consecutive_incorrect('WORLD', 'WOHL')
2
"""
if not target_text:
return len(spelled_text)
for i, character in enumerate(spelled_text):
if character != target_text[i]:
return len(spelled_text[i:])
return 0
26 changes: 19 additions & 7 deletions bcipy/helpers/tests/test_task.py
Original file line number Diff line number Diff line change
@@ -1,20 +1,18 @@
import unittest

from typing import List
from collections import Counter
from mockito import unstub, mock, when, verify, verifyStubbedInvocationsAreUsed
from typing import List

import numpy as np
import psychopy
from mockito import mock, unstub, verify, verifyStubbedInvocationsAreUsed, when

from bcipy.acquisition import LslAcquisitionClient
from bcipy.acquisition.record import Record
from bcipy.task.exceptions import InsufficientDataException

from bcipy.helpers.task import (_float_val,
calculate_stimulation_freq, construct_triggers,
from bcipy.helpers.task import (_float_val, calculate_stimulation_freq,
consecutive_incorrect, construct_triggers,
generate_targets, get_data_for_decision,
get_key_press, target_info)
from bcipy.task.exceptions import InsufficientDataException


class TestCalculateStimulationFreq(unittest.TestCase):
Expand Down Expand Up @@ -319,5 +317,19 @@ def test_get_data_for_decision_throws_insufficient_data_error_if_data_query_out_
get_data_for_decision(inquiry_timing, self.daq)


class TestUtils(unittest.TestCase):
"""Tests for utility functions"""

def test_consecutive_incorrect(self):
"""Test calculation of consecutive incorrect"""
self.assertEqual(
0, consecutive_incorrect(target_text='', spelled_text=''))
self.assertEqual(0, consecutive_incorrect('WORLD', ''))
self.assertEqual(0, consecutive_incorrect('WORLD', 'W'))
self.assertEqual(0, consecutive_incorrect('WORLD', 'WORLD'))
self.assertEqual(1, consecutive_incorrect('WORLD', 'H'))
self.assertEqual(2, consecutive_incorrect('WORLD', 'WOHL'))


if __name__ == '__main__':
unittest.main()
10 changes: 9 additions & 1 deletion bcipy/parameters/parameters.json
Original file line number Diff line number Diff line change
Expand Up @@ -535,7 +535,7 @@
"type": "float"
},
"stim_number": {
"value": "100",
"value": "55",
"section": "bci_config",
"readableName": "Number of Calibration inquiries",
"helpTip": "Specifies the number of inquiries to present in a calibration session. Default: 100",
Expand Down Expand Up @@ -611,6 +611,14 @@
"recommended_values": "",
"type": "int"
},
"max_incorrect": {
"value": "3",
"section": "bci_config",
"readableName": "Maximum Number of Incorrect Selections",
"helpTip": "The maximum number of consecutive incorrect selections for copy/spelling tasks. The task will end if this number is reached.",
"recommended_values": "",
"type": "int"
},
"decision_threshold": {
"value": "0.8",
"section": "bci_config",
Expand Down
15 changes: 13 additions & 2 deletions bcipy/task/paradigm/rsvp/copy_phrase.py
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,8 @@
from bcipy.helpers.session import session_excel
from bcipy.helpers.stimuli import InquirySchedule, StimuliOrder
from bcipy.helpers.symbols import BACKSPACE_CHAR, alphabet
from bcipy.helpers.task import (construct_triggers, fake_copy_phrase_decision,
from bcipy.helpers.task import (consecutive_incorrect, construct_triggers,
fake_copy_phrase_decision,
get_device_data_for_decision, get_user_input,
relative_triggers, target_info,
trial_complete_message)
Expand Down Expand Up @@ -94,7 +95,8 @@ class RSVPCopyPhraseTask(Task):
'font', 'fixation_color', 'trigger_type',
'filter_high', 'filter_low', 'filter_order', 'notch_filter_frequency', 'down_sampling_rate', 'prestim_length',
'is_txt_stim', 'lm_backspace_prob', 'backspace_always_shown',
'decision_threshold', 'max_inq_len', 'max_inq_per_series', 'max_minutes', 'max_selections', 'min_inq_len',
'decision_threshold', 'max_inq_len', 'max_inq_per_series', 'max_minutes', 'max_selections', 'max_incorrect',
'min_inq_len',
'show_feedback', 'feedback_duration',
'show_preview_inquiry', 'preview_inquiry_isi', 'preview_inquiry_error_prob',
'preview_inquiry_key_input', 'preview_inquiry_length', 'preview_inquiry_progress_method',
Expand Down Expand Up @@ -416,6 +418,15 @@ def check_stop_criteria(self) -> bool:
'(configured with the max_selections parameter)')
return False

if consecutive_incorrect(
target_text=self.copy_phrase,
spelled_text=self.spelled_text) >= self.parameters.get(
'max_incorrect', 3):
self.logger.info(
'Max number of consecutive incorrect selections reached '
'(configured with the max_incorrect parameter)')
return False

return True

def next_target(self) -> str:
Expand Down
1 change: 1 addition & 0 deletions bcipy/task/tests/paradigm/rsvp/test_copy_phrase.py
Original file line number Diff line number Diff line change
Expand Up @@ -50,6 +50,7 @@ def setUp(self):
'max_minutes': 20,
'min_inq_len': 1,
'max_selections': 50,
'max_incorrect': 10,
'notch_filter_frequency': 60.0,
'preview_inquiry_isi': 1.0,
'preview_inquiry_key_input': 'space',
Expand Down

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