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SWIPE is great but I am running into to issues when aligning sequences that have many hits with the same alignment score. I want all these to appear in the output. I could just increase --num_alignments and --num_descriptions but this is not a good solution as the output file balloons.
It would be great if an option existed that would only print out all the highest scoring descriptions and/or alignments.
Thanks,
Kristian
The text was updated successfully, but these errors were encountered:
SWIPE is great but I am running into to issues when aligning sequences that have many hits with the same alignment score. I want all these to appear in the output. I could just increase
--num_alignments
and--num_descriptions
but this is not a good solution as the output file balloons.It would be great if an option existed that would only print out all the highest scoring descriptions and/or alignments.
Thanks,
Kristian
The text was updated successfully, but these errors were encountered: