From d76e97e2c51d920b8a3a932f3aa2862ce681481f Mon Sep 17 00:00:00 2001
From: LorenzLamm <34575029+LorenzLamm@users.noreply.github.com>
Date: Wed, 1 Nov 2023 09:51:15 +0100
Subject: [PATCH] Add default arguments to components and threshold functions
 (#42)

---
 src/membrain_seg/segmentation/cli/segment_cli.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/membrain_seg/segmentation/cli/segment_cli.py b/src/membrain_seg/segmentation/cli/segment_cli.py
index 5125e8e..b96cbec 100644
--- a/src/membrain_seg/segmentation/cli/segment_cli.py
+++ b/src/membrain_seg/segmentation/cli/segment_cli.py
@@ -78,7 +78,7 @@ def segment(
 @cli.command(name="components", no_args_is_help=True)
 def components(
     segmentation_path: str = Option(  # noqa: B008
-        help="Path to the membrane segmentation to be processed.", **PKWARGS
+        ..., help="Path to the membrane segmentation to be processed.", **PKWARGS
     ),
     out_folder: str = Option(  # noqa: B008
         "./predictions", help="Path to the folder where segmentations should be stored."
@@ -114,7 +114,7 @@ def components(
 @cli.command(name="thresholds", no_args_is_help=True)
 def thresholds(
     scoremap_path: str = Option(  # noqa: B008
-        help="Path to the membrane scoremap to be processed.", **PKWARGS
+        ..., help="Path to the membrane scoremap to be processed.", **PKWARGS
     ),
     thresholds: List[float] = Option(  # noqa: B008
         ...,