pytest.yml

name: pytest

on:
  pull_request:
  push:
    branches: [main]

jobs:
  pytest:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v4
    - name: Set up Python
      uses: actions/setup-python@v4
      with:
        python-version: 3.10.14
    - name: Install miniconda
      run: |
        wget -O Miniforge3.sh "https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-$(uname)-$(uname -m).sh"
        bash Miniforge3.sh -b -p "${HOME}/conda"
        source "${HOME}/conda/etc/profile.d/conda.sh"
        source "${HOME}/conda/etc/profile.d/mamba.sh"
    - name: Install dev dependencies
      run: |
        conda env create -f environment-dev.yml
        conda activate boreholes-dev
    - name: Test with pytest
      run: |
        conda install pytest-cov -y
        pytest --doctest-modules --junitxml=junit/test-results.xml --cov=com --cov-report=xml --cov-report=html