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inrajeshrinet/pyross (press backspace or delete to remove)In examples/inference/ex08-optimal_design.ipynb in the fifth code cell the following lines appear:
make a fltr to get Is for each age class
fltr1=np.kron([[0, 0, 0, 1]], np.identity(M)) obs1=np.einsum( ...
- yairdaon
- Opened on Apr 2, 2024
- #48
See release notes: https://numpy.org/doc/stable/release/1.24.0-notes.html#expired-deprecations
np.float is not the only scalar type that was removed. In order to stay compatible with packages that depend ...
- qacwnfq
- 2
- Opened on Jul 11, 2023
- #47
Hi there again, I m using the option least_squares_diff in latent_infer (nice one btw). I ve noticed that, after doing
xm = np.diff(xm,axis=0) in line 3654 of inference.pyx (function _obtain_square_dev_for_lat_traj_diff) ...
- rodlaje
- Opened on Aug 19, 2022
- #44
Hey there, First off, such a great job. We are using PyRoss to implement epidemiological forecasts when you have very
scarce data (as in many places here in Latin America). My question, it would be amazing ...
- rodlaje
- Opened on Aug 19, 2022
- #43
I ve been trying to use https://mybinder.org/v2/gh/rajeshrinet/pyross/master?filepath=binder but it s currently not
operating properly, any suggestions?
- dwilson10
- 2
- Opened on Apr 18, 2022
- #42
If I just use solve_ivp in SciPy, I can run until steady state using callbacks. See this SO post and the following code
for an SIR model. Can I do this in Pyross too?
import numpy as np
from scipy.integrate ...
- sdwfrost
- 2
- Opened on Apr 9, 2022
- #41
Hi,
I would like to use your PyRoss modelling code to implement an SEIRV model to do some inference on vaccination
strategies and the reopening of schools.
As far as I’m aware, a vaccination class (where ...
- ahb48
- 4
- Opened on Jul 5, 2021
- #39
I think there is an error on the description for the parameter fsa in the readthedocs?
fsa: float, np.array (M,) Fraction by which symptomatic individuals self isolate.
should be corrected to
fsa: float, ...
- shermanlo77
- 1
- Opened on Oct 23, 2020
- #37
Hi,
Any plans or possibility to support time varying model parameters that depend on other external data? Is this best
achieved by modifying the contact matrix during the simulation?
Thanks!
- amir-ghasemi
- 1
- Opened on Oct 13, 2020
- #36
Hi Rajeshrinet, I have tried to install pyros over the last two days with no luck. Indeed it is a painful journey. I did
look at pyros issue posts.
Would you please help. Many thanks in advance. Also ...
- wajoor
- 8
- Opened on Jun 29, 2020
- #32
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