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    54 repositories

    • comp-neurosci

      Public
      Problem sets and materials for systems and computational neuroscience course
      Jupyter Notebook
      •11•15•3•0•Updated Jan 17, 2025Jan 17, 2025

    • decide-rs

      Public
      Rust
      •2•1•5•1•Updated Jan 17, 2025Jan 17, 2025

    • arfx

      Public
      tools for using ARF files
      Python
      •
      GNU General Public License v2.0
      •1•0•1•0•Updated Jan 3, 2025Jan 3, 2025

    • arf

      Public
      advanced recording format for physiology and behavior
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •6•3•0•0•Updated Jan 2, 2025Jan 2, 2025

    • cr-pr-adults

      Public
      Analysis code for Moseley and Meliza (2025) "A complex acoustical environment during development enhances auditory perception and coding efficiency in the zebra finch"
      Jupyter Notebook
      •0•0•0•0•Updated Jan 2, 2025Jan 2, 2025

    • quickspikes

      Public
      Fast spike detection and extraction for Python
      Python
      •
      GNU General Public License v3.0
      •8•32•0•0•Updated Dec 27, 2024Dec 27, 2024

    • neurobank

      Public
      management system for experimental data
      Python
      •
      GNU General Public License v2.0
      •1•0•2•0•Updated Dec 27, 2024Dec 27, 2024

    • py-ewave

      Public
      Pure python module for I/O of extended WAVE formats
      Python
      •1•5•2•0•Updated Dec 27, 2024Dec 27, 2024

    • django-lab-inventory

      Public
      lab inventory management
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •14•49•2•1•Updated Dec 23, 2024Dec 23, 2024

    • django-bird-colony

      Public
      Bird colony management tool
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•4•5•1•Updated Dec 23, 2024Dec 23, 2024

    • django-neurobank

      Public
      A simple Django backend for the neurobank system
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•1•1•2•Updated Dec 23, 2024Dec 23, 2024

    • libtfr

      Public
      fast multitaper conventional and reassignment spectrograms
      C
      •
      GNU General Public License v2.0
      •9•47•3•1•Updated Dec 16, 2024Dec 16, 2024

    • melizalab-tools

      Public
      a grab bag of python functions for neural and audio signal processing
      Python
      •2•1•0•2•Updated Dec 9, 2024Dec 9, 2024

    • toelis

      Public
      Store and manipulate lists of event times
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Sep 29, 2024Sep 29, 2024

    • mat-neuron

      Public
      python implementation of the multi-timescale adaptive threshold (MAT) neuron model of Kobayashi et al
      Python
      •1•1•1•1•Updated Sep 3, 2024Sep 3, 2024

    • mpc-hh

      Public
      Model predictive control of a Hodgkin Huxley neuron
      Python
      •0•0•0•0•Updated Jul 11, 2024Jul 11, 2024

    • mpc-latent

      Public
      Model predictive control of latent dynamics
      0•0•0•0•Updated Jul 10, 2024Jul 10, 2024

    • python-skeleton

      Public
      skeleton for a python project
      Jupyter Notebook
      •0•0•0•0•Updated Jun 27, 2024Jun 27, 2024

    • jill

      Public
      realtime electrophysiology, behavioral, and acoustic recording system
      C++
      •5•3•5•0•Updated May 9, 2024May 9, 2024

    • open-ephys-audio

      Public
      A python package for presenting acoustic stimuli and synchronizing with data collection by open-ephys
      Python
      •0•0•2•0•Updated May 3, 2024May 3, 2024

    • django-decide-host

      Public
      Host with REST API for storing decide event and trial data
      Python
      •0•1•1•0•Updated Apr 2, 2024Apr 2, 2024

    • aplot

      Public
      GUI for viewing discrete and point process data
      C
      •0•1•0•0•Updated Feb 12, 2024Feb 12, 2024

    • lmeasure-svc

      Public
      Run L-Measure as a friendly JSON-based web app!
      AGS Script
      •0•0•0•1•Updated Jan 23, 2024Jan 23, 2024

    • py_crust

      Public
      Python Client-side Library and Operant Scripts for Decide-rs
      Python
      •0•0•0•0•Updated Nov 10, 2023Nov 10, 2023

    • decide-host

      Public archive
      host process for managing decide operant controllers
      Clojure
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•2•0•Updated Oct 26, 2023Oct 26, 2023

    • audio-sync-circuit

      Public
      EAGLE CAD files for a simple circuit that converts a synchronization pulse on an audio channel to a TTL pulse
      0•0•0•0•Updated Sep 21, 2023Sep 21, 2023

    • cm_plasticity

      Public
      Source code for analysis of intracellular data for CM plasticity project
      Python
      •0•0•0•0•Updated Jul 28, 2023Jul 28, 2023

    • PySpike

      Public
      Python implementation of spike distance metrics
      Python
      •
      Other
      •31•0•0•0•Updated Jul 27, 2023Jul 27, 2023

    • comp-neurosci-skeleton

      Public
      Skeleton python project
      Python
      •2•0•0•2•Updated Jul 6, 2023Jul 6, 2023

    • spyks

      Public
      generate fast c++ code to integrate neuron models
      C++
      •2•1•3•0•Updated Feb 1, 2023Feb 1, 2023