diff --git a/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/OpenCgaCompleter.java b/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/OpenCgaCompleter.java
index 2a2d4a8adf0..b80af90ba5e 100644
--- a/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/OpenCgaCompleter.java
+++ b/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/OpenCgaCompleter.java
@@ -1,5 +1,5 @@
 /*
-* Copyright 2015-2023-11-13 OpenCB
+* Copyright 2015-2023-11-21 OpenCB
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
diff --git a/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/OpencgaCliOptionsParser.java b/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/OpencgaCliOptionsParser.java
index 8746d0cc58e..a02dfa83516 100644
--- a/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/OpencgaCliOptionsParser.java
+++ b/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/OpencgaCliOptionsParser.java
@@ -1,5 +1,5 @@
 /*
-* Copyright 2015-2023-11-13 OpenCB
+* Copyright 2015-2023-11-21 OpenCB
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
diff --git a/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/io/TextOutputWriter.java b/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/io/TextOutputWriter.java
index 1b8914bdbf0..a4e75a72794 100644
--- a/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/io/TextOutputWriter.java
+++ b/opencga-app/src/main/java/org/opencb/opencga/app/cli/main/io/TextOutputWriter.java
@@ -88,22 +88,14 @@ public void print(RestResponse queryResponse) {
             throw new RuntimeException(e);
         }
 
-     /*   //   if (queryResponse != null && queryResponse.getType().equals(QueryType.VOID)) {
-        if (queryResponse.getEvents() != null) {
-            for (Event event : ((RestResponse<Object>)queryResponse.getResponses().get(0)).getEvents()) {
-                if (StringUtils.isNotEmpty(event.getMessage())) {
-                    if (event.getType().equals(Event.Type.ERROR)) {
-                        PrintUtils.printError(event.getMessage());
-                    } else {
-                        PrintUtils.printInfo(event.getMessage());
-                    }
-                } else {
-                    PrintUtils.printError(event.getMessage());
-                }
+        if (queryResponse != null && queryResponse.getType().equals(QueryType.VOID)) {
+            if (queryResponse.getResponses() != null && queryResponse.getResponses().size() > 0) {
+                manageEvents(((RestResponse<Object>) queryResponse.getResponses().get(0)).getEvents());
+            } else if (queryResponse.getEvents() != null && queryResponse.getEvents().size() > 0) {
+                manageEvents(queryResponse.getEvents());
             }
+            return;
         }
-        // return;
-        //  }
         if (checkErrors(queryResponse) && queryResponse.allResultsSize() == 0) {
             return;
         }
@@ -112,11 +104,9 @@ public void print(RestResponse queryResponse) {
             return;
         }
 
-
         ps.print(printMetadata(queryResponse));
-*/
-        List<DataResult> queryResultList = queryResponse.getResponses();
 
+        List<DataResult> queryResultList = queryResponse.getResponses();
 
         if (CollectionUtils.isNotEmpty(queryResultList) && ((OpenCGAResult) queryResultList.get(0)) != null
                 && ((OpenCGAResult) queryResultList.get(0)).getNumMatches() > -1 && !isEdition(queryResultList) && isNotAnIdOrMessage(queryResultList)) {
@@ -183,6 +173,20 @@ public void print(RestResponse queryResponse) {
         }
     }
 
+    private void manageEvents(final List<Event> events) {
+        for (Event event : events) {
+            if (StringUtils.isNotEmpty(event.getMessage())) {
+                if (event.getType().equals(Event.Type.ERROR)) {
+                    PrintUtils.printError(event.getMessage());
+                } else {
+                    PrintUtils.printInfo(event.getMessage());
+                }
+            } else {
+                PrintUtils.printError(event.getMessage());
+            }
+        }
+    }
+
     private boolean isNotAnIdOrMessage(List<DataResult> queryResultList) {
         return !(queryResultList.get(0).getResultType().equals("java.lang.String") &&
                 ((OpenCGAResult) queryResultList.get(0)).getNumMatches() == 1);
diff --git a/opencga-catalog/src/main/java/org/opencb/opencga/catalog/managers/FileManager.java b/opencga-catalog/src/main/java/org/opencb/opencga/catalog/managers/FileManager.java
index d3e4c12503a..d7cbd3cc475 100644
--- a/opencga-catalog/src/main/java/org/opencb/opencga/catalog/managers/FileManager.java
+++ b/opencga-catalog/src/main/java/org/opencb/opencga/catalog/managers/FileManager.java
@@ -3712,16 +3712,23 @@ OpenCGAResult<File> registerFile(Study study, String filePath, URI fileUri, Stri
 
         File.Type type = filePath.endsWith("/") ? File.Type.DIRECTORY : File.Type.FILE;
 
-        File subfile = new File(Paths.get(filePath).getFileName().toString(), type, File.Format.UNKNOWN,
-                File.Bioformat.NONE, fileUri, filePath, "", TimeUtils.getTime(), TimeUtils.getTime(),
-                "", isExternal(study, filePath, fileUri), size, new Software(), new FileExperiment(), Collections.emptyList(),
-                Collections.emptyList(), jobId, studyManager.getCurrentRelease(study), Collections.emptyList(), Collections.emptyList(),
-                new FileQualityControl(), Collections.emptyMap(), new Status(), FileInternal.init(), Collections.emptyMap());
+        File.Format format = org.opencb.opencga.catalog.managers.FileUtils.detectFormat(fileUri);
+        File.Bioformat bioformat = org.opencb.opencga.catalog.managers.FileUtils.detectBioformat(fileUri);
+        File subfile = new File(Paths.get(filePath).getFileName().toString(), type, format, bioformat, fileUri, filePath, "",
+                TimeUtils.getTime(), TimeUtils.getTime(), "", isExternal(study, filePath, fileUri), size, new Software(),
+                new FileExperiment(), Collections.emptyList(), Collections.emptyList(), jobId, studyManager.getCurrentRelease(study),
+                Collections.emptyList(), Collections.emptyList(), new FileQualityControl(), Collections.emptyMap(), new Status(),
+                FileInternal.init(), Collections.emptyMap());
         subfile.setUuid(UuidUtils.generateOpenCgaUuid(UuidUtils.Entity.FILE));
         checkHooks(subfile, study.getFqn(), HookConfiguration.Stage.CREATE);
 
         // Improve metadata information and extract samples if any
-        new FileMetadataReader(catalogManager).addMetadataInformation(study.getFqn(), subfile);
+        try {
+            new FileMetadataReader(catalogManager).addMetadataInformation(study.getFqn(), subfile);
+        } catch (CatalogException e) {
+            subfile.getInternal().setStatus(new FileStatus(FileStatus.ERROR, "Could not extract metadata information: " + e.getMessage()));
+            logger.warn("Could not extract metadata information from file {}: {}", fileUri, e.getMessage(), e);
+        }
         List<Sample> existingSamples = new LinkedList<>();
         List<Sample> nonExistingSamples = new LinkedList<>();
         validateNewSamples(study, subfile, existingSamples, nonExistingSamples, token);
diff --git a/opencga-catalog/src/main/java/org/opencb/opencga/catalog/utils/FileMetadataReader.java b/opencga-catalog/src/main/java/org/opencb/opencga/catalog/utils/FileMetadataReader.java
index 12cdbf83801..8a51691706f 100644
--- a/opencga-catalog/src/main/java/org/opencb/opencga/catalog/utils/FileMetadataReader.java
+++ b/opencga-catalog/src/main/java/org/opencb/opencga/catalog/utils/FileMetadataReader.java
@@ -181,7 +181,7 @@ private FileUpdateParams extractMetadataInformation(String studyId, File file) t
                 VariantFileMetadata fileMetadata;
                 try {
                     fileMetadata = readVariantFileMetadata(file, file.getUri());
-                } catch (IOException e) {
+                } catch (Exception e) {
                     throw new CatalogIOException("Unable to read VariantSource", e);
                 }
                 if (fileMetadata != null) {
diff --git a/opencga-client/src/main/R/R/Admin-methods.R b/opencga-client/src/main/R/R/Admin-methods.R
index 459563289aa..ae477210b1e 100644
--- a/opencga-client/src/main/R/R/Admin-methods.R
+++ b/opencga-client/src/main/R/R/Admin-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
diff --git a/opencga-client/src/main/R/R/Alignment-methods.R b/opencga-client/src/main/R/R/Alignment-methods.R
index 71e1dad3bb6..8560a244847 100644
--- a/opencga-client/src/main/R/R/Alignment-methods.R
+++ b/opencga-client/src/main/R/R/Alignment-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
diff --git a/opencga-client/src/main/R/R/AllGenerics.R b/opencga-client/src/main/R/R/AllGenerics.R
index 913594e3fb5..b0068c9950b 100644
--- a/opencga-client/src/main/R/R/AllGenerics.R
+++ b/opencga-client/src/main/R/R/AllGenerics.R
@@ -1,46 +1,46 @@
 # ##############################################################################
 ## UserClient
-setGeneric("userClient", function(OpencgaR, user, filterId, users, endpointName, params=NULL, ...)
+setGeneric("userClient", function(OpencgaR, filterId, user, users, endpointName, params=NULL, ...)
     standardGeneric("userClient"))
 
 # ##############################################################################
 ## ProjectClient
-setGeneric("projectClient", function(OpencgaR, project, projects, endpointName, params=NULL, ...)
+setGeneric("projectClient", function(OpencgaR, projects, project, endpointName, params=NULL, ...)
     standardGeneric("projectClient"))
 
 # ##############################################################################
 ## StudyClient
-setGeneric("studyClient", function(OpencgaR, templateId, group, members, variableSet, studies, study, endpointName, params=NULL, ...)
+setGeneric("studyClient", function(OpencgaR, templateId, members, studies, variableSet, study, group, endpointName, params=NULL, ...)
     standardGeneric("studyClient"))
 
 # ##############################################################################
 ## FileClient
-setGeneric("fileClient", function(OpencgaR, file, members, folder, files, annotationSet, endpointName, params=NULL, ...)
+setGeneric("fileClient", function(OpencgaR, folder, members, file, annotationSet, files, endpointName, params=NULL, ...)
     standardGeneric("fileClient"))
 
 # ##############################################################################
 ## JobClient
-setGeneric("jobClient", function(OpencgaR, job, jobs, members, endpointName, params=NULL, ...)
+setGeneric("jobClient", function(OpencgaR, jobs, members, job, endpointName, params=NULL, ...)
     standardGeneric("jobClient"))
 
 # ##############################################################################
 ## SampleClient
-setGeneric("sampleClient", function(OpencgaR, sample, annotationSet, members, samples, endpointName, params=NULL, ...)
+setGeneric("sampleClient", function(OpencgaR, annotationSet, members, samples, sample, endpointName, params=NULL, ...)
     standardGeneric("sampleClient"))
 
 # ##############################################################################
 ## IndividualClient
-setGeneric("individualClient", function(OpencgaR, individual, annotationSet, individuals, members, endpointName, params=NULL, ...)
+setGeneric("individualClient", function(OpencgaR, individual, members, individuals, annotationSet, endpointName, params=NULL, ...)
     standardGeneric("individualClient"))
 
 # ##############################################################################
 ## FamilyClient
-setGeneric("familyClient", function(OpencgaR, families, annotationSet, members, family, endpointName, params=NULL, ...)
+setGeneric("familyClient", function(OpencgaR, family, members, families, annotationSet, endpointName, params=NULL, ...)
     standardGeneric("familyClient"))
 
 # ##############################################################################
 ## CohortClient
-setGeneric("cohortClient", function(OpencgaR, cohort, annotationSet, members, cohorts, endpointName, params=NULL, ...)
+setGeneric("cohortClient", function(OpencgaR, cohorts, members, cohort, annotationSet, endpointName, params=NULL, ...)
     standardGeneric("cohortClient"))
 
 # ##############################################################################
@@ -60,7 +60,7 @@ setGeneric("variantClient", function(OpencgaR, endpointName, params=NULL, ...)
 
 # ##############################################################################
 ## ClinicalClient
-setGeneric("clinicalClient", function(OpencgaR, clinicalAnalyses, interpretations, clinicalAnalysis, members, interpretation, endpointName, params=NULL, ...)
+setGeneric("clinicalClient", function(OpencgaR, clinicalAnalysis, clinicalAnalyses, members, interpretation, interpretations, endpointName, params=NULL, ...)
     standardGeneric("clinicalClient"))
 
 # ##############################################################################
diff --git a/opencga-client/src/main/R/R/Clinical-methods.R b/opencga-client/src/main/R/R/Clinical-methods.R
index ce4e7757d75..fab63cdbd0a 100644
--- a/opencga-client/src/main/R/R/Clinical-methods.R
+++ b/opencga-client/src/main/R/R/Clinical-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -58,7 +58,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("clinicalClient", "OpencgaR", function(OpencgaR, clinicalAnalyses, interpretations, clinicalAnalysis, members, interpretation, endpointName, params=NULL, ...) {
+setMethod("clinicalClient", "OpencgaR", function(OpencgaR, clinicalAnalysis, clinicalAnalyses, members, interpretation, interpretations, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/analysis/clinical/acl/{members}/update:
diff --git a/opencga-client/src/main/R/R/Cohort-methods.R b/opencga-client/src/main/R/R/Cohort-methods.R
index 01447cf29b2..81c5bfaf062 100644
--- a/opencga-client/src/main/R/R/Cohort-methods.R
+++ b/opencga-client/src/main/R/R/Cohort-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -39,7 +39,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("cohortClient", "OpencgaR", function(OpencgaR, cohort, annotationSet, members, cohorts, endpointName, params=NULL, ...) {
+setMethod("cohortClient", "OpencgaR", function(OpencgaR, cohorts, members, cohort, annotationSet, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/cohorts/acl/{members}/update:
diff --git a/opencga-client/src/main/R/R/Family-methods.R b/opencga-client/src/main/R/R/Family-methods.R
index 76ae48fbf8d..82c680e4aa1 100644
--- a/opencga-client/src/main/R/R/Family-methods.R
+++ b/opencga-client/src/main/R/R/Family-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -38,7 +38,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("familyClient", "OpencgaR", function(OpencgaR, families, annotationSet, members, family, endpointName, params=NULL, ...) {
+setMethod("familyClient", "OpencgaR", function(OpencgaR, family, members, families, annotationSet, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/families/acl/{members}/update:
diff --git a/opencga-client/src/main/R/R/File-methods.R b/opencga-client/src/main/R/R/File-methods.R
index 1fe1285ddfe..224889cbec9 100644
--- a/opencga-client/src/main/R/R/File-methods.R
+++ b/opencga-client/src/main/R/R/File-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -54,7 +54,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("fileClient", "OpencgaR", function(OpencgaR, file, members, folder, files, annotationSet, endpointName, params=NULL, ...) {
+setMethod("fileClient", "OpencgaR", function(OpencgaR, folder, members, file, annotationSet, files, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/files/acl/{members}/update:
diff --git a/opencga-client/src/main/R/R/GA4GH-methods.R b/opencga-client/src/main/R/R/GA4GH-methods.R
index 69eb3b2807b..26788aad18d 100644
--- a/opencga-client/src/main/R/R/GA4GH-methods.R
+++ b/opencga-client/src/main/R/R/GA4GH-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
diff --git a/opencga-client/src/main/R/R/Individual-methods.R b/opencga-client/src/main/R/R/Individual-methods.R
index 99d286bd4b2..c2b5f47ee01 100644
--- a/opencga-client/src/main/R/R/Individual-methods.R
+++ b/opencga-client/src/main/R/R/Individual-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -39,7 +39,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("individualClient", "OpencgaR", function(OpencgaR, individual, annotationSet, individuals, members, endpointName, params=NULL, ...) {
+setMethod("individualClient", "OpencgaR", function(OpencgaR, individual, members, individuals, annotationSet, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/individuals/acl/{members}/update:
diff --git a/opencga-client/src/main/R/R/Job-methods.R b/opencga-client/src/main/R/R/Job-methods.R
index 142152e1837..ed99e482cc8 100644
--- a/opencga-client/src/main/R/R/Job-methods.R
+++ b/opencga-client/src/main/R/R/Job-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -40,7 +40,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("jobClient", "OpencgaR", function(OpencgaR, job, jobs, members, endpointName, params=NULL, ...) {
+setMethod("jobClient", "OpencgaR", function(OpencgaR, jobs, members, job, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/jobs/acl/{members}/update:
diff --git a/opencga-client/src/main/R/R/Meta-methods.R b/opencga-client/src/main/R/R/Meta-methods.R
index f2f6fd2d9c1..dd5036d5550 100644
--- a/opencga-client/src/main/R/R/Meta-methods.R
+++ b/opencga-client/src/main/R/R/Meta-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
diff --git a/opencga-client/src/main/R/R/Operation-methods.R b/opencga-client/src/main/R/R/Operation-methods.R
index fc7bd100801..dd9eb327ea9 100644
--- a/opencga-client/src/main/R/R/Operation-methods.R
+++ b/opencga-client/src/main/R/R/Operation-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
diff --git a/opencga-client/src/main/R/R/Panel-methods.R b/opencga-client/src/main/R/R/Panel-methods.R
index 22a3e83fef4..541d68f22e9 100644
--- a/opencga-client/src/main/R/R/Panel-methods.R
+++ b/opencga-client/src/main/R/R/Panel-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
diff --git a/opencga-client/src/main/R/R/Project-methods.R b/opencga-client/src/main/R/R/Project-methods.R
index b493b10f4fa..14d48a37e54 100644
--- a/opencga-client/src/main/R/R/Project-methods.R
+++ b/opencga-client/src/main/R/R/Project-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -34,7 +34,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("projectClient", "OpencgaR", function(OpencgaR, project, projects, endpointName, params=NULL, ...) {
+setMethod("projectClient", "OpencgaR", function(OpencgaR, projects, project, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/projects/create:
diff --git a/opencga-client/src/main/R/R/Sample-methods.R b/opencga-client/src/main/R/R/Sample-methods.R
index b311baf89a1..43d03aec39d 100644
--- a/opencga-client/src/main/R/R/Sample-methods.R
+++ b/opencga-client/src/main/R/R/Sample-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -39,7 +39,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("sampleClient", "OpencgaR", function(OpencgaR, sample, annotationSet, members, samples, endpointName, params=NULL, ...) {
+setMethod("sampleClient", "OpencgaR", function(OpencgaR, annotationSet, members, samples, sample, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/samples/acl/{members}/update:
diff --git a/opencga-client/src/main/R/R/Study-methods.R b/opencga-client/src/main/R/R/Study-methods.R
index cd7b088f00b..5b77ac8bf5c 100644
--- a/opencga-client/src/main/R/R/Study-methods.R
+++ b/opencga-client/src/main/R/R/Study-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -46,7 +46,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("studyClient", "OpencgaR", function(OpencgaR, templateId, group, members, variableSet, studies, study, endpointName, params=NULL, ...) {
+setMethod("studyClient", "OpencgaR", function(OpencgaR, templateId, members, studies, variableSet, study, group, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/studies/acl/{members}/update:
diff --git a/opencga-client/src/main/R/R/User-methods.R b/opencga-client/src/main/R/R/User-methods.R
index 9aeaa258b88..0ded200ca86 100644
--- a/opencga-client/src/main/R/R/User-methods.R
+++ b/opencga-client/src/main/R/R/User-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
@@ -38,7 +38,7 @@
 #' [*]: Required parameter
 #' @export
 
-setMethod("userClient", "OpencgaR", function(OpencgaR, user, filterId, users, endpointName, params=NULL, ...) {
+setMethod("userClient", "OpencgaR", function(OpencgaR, filterId, user, users, endpointName, params=NULL, ...) {
     switch(endpointName,
 
         #' @section Endpoint /{apiVersion}/users/login:
diff --git a/opencga-client/src/main/R/R/Variant-methods.R b/opencga-client/src/main/R/R/Variant-methods.R
index adddc7f944c..6d2f29fe872 100644
--- a/opencga-client/src/main/R/R/Variant-methods.R
+++ b/opencga-client/src/main/R/R/Variant-methods.R
@@ -2,7 +2,7 @@
 # WARNING: AUTOGENERATED CODE
 #
 #    This code was generated by a tool.
-#    Autogenerated on: 2023-11-13
+#    Autogenerated on: 2023-11-21
 #    
 #    Manual changes to this file may cause unexpected behavior in your application.
 #    Manual changes to this file will be overwritten if the code is regenerated.
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/AdminClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/AdminClient.java
index 8435b397046..ea9053acf3e 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/AdminClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/AdminClient.java
@@ -36,7 +36,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -45,7 +45,7 @@
 
 /**
  * This class contains methods for the Admin webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: admin
  */
 public class AdminClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/AlignmentClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/AlignmentClient.java
index 05dfcde8cc2..9c00f1476bc 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/AlignmentClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/AlignmentClient.java
@@ -40,7 +40,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -49,7 +49,7 @@
 
 /**
  * This class contains methods for the Alignment webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: analysis/alignment
  */
 public class AlignmentClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/ClinicalAnalysisClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/ClinicalAnalysisClient.java
index d347523ad1a..97d4dc4846c 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/ClinicalAnalysisClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/ClinicalAnalysisClient.java
@@ -51,7 +51,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -60,7 +60,7 @@
 
 /**
  * This class contains methods for the ClinicalAnalysis webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: analysis/clinical
  */
 public class ClinicalAnalysisClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/CohortClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/CohortClient.java
index 3a63e02ad17..8991b50f7b8 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/CohortClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/CohortClient.java
@@ -37,7 +37,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -46,7 +46,7 @@
 
 /**
  * This class contains methods for the Cohort webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: cohorts
  */
 public class CohortClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/DiseasePanelClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/DiseasePanelClient.java
index 8653ba08de1..fc3bce5fd21 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/DiseasePanelClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/DiseasePanelClient.java
@@ -35,7 +35,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -44,7 +44,7 @@
 
 /**
  * This class contains methods for the DiseasePanel webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: panels
  */
 public class DiseasePanelClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/FamilyClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/FamilyClient.java
index 57bf1c4274f..f0b96f0ad27 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/FamilyClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/FamilyClient.java
@@ -36,7 +36,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -45,7 +45,7 @@
 
 /**
  * This class contains methods for the Family webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: families
  */
 public class FamilyClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/FileClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/FileClient.java
index 857524ce7c6..26420fe0854 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/FileClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/FileClient.java
@@ -43,7 +43,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -52,7 +52,7 @@
 
 /**
  * This class contains methods for the File webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: files
  */
 public class FileClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/GA4GHClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/GA4GHClient.java
index f0037da17a5..23247404844 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/GA4GHClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/GA4GHClient.java
@@ -27,7 +27,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -36,7 +36,7 @@
 
 /**
  * This class contains methods for the GA4GH webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: ga4gh
  */
 public class GA4GHClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/IndividualClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/IndividualClient.java
index 698a001dd12..563387f83f9 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/IndividualClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/IndividualClient.java
@@ -36,7 +36,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -45,7 +45,7 @@
 
 /**
  * This class contains methods for the Individual webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: individuals
  */
 public class IndividualClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/JobClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/JobClient.java
index c30324489c5..44c77b3ce80 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/JobClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/JobClient.java
@@ -37,7 +37,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -46,7 +46,7 @@
 
 /**
  * This class contains methods for the Job webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: jobs
  */
 public class JobClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/MetaClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/MetaClient.java
index 87bba3d77c7..ef9f54e6ebe 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/MetaClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/MetaClient.java
@@ -28,7 +28,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -37,7 +37,7 @@
 
 /**
  * This class contains methods for the Meta webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: meta
  */
 public class MetaClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/ProjectClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/ProjectClient.java
index fbdd5eb5726..aae1fef2033 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/ProjectClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/ProjectClient.java
@@ -32,7 +32,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -41,7 +41,7 @@
 
 /**
  * This class contains methods for the Project webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: projects
  */
 public class ProjectClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/SampleClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/SampleClient.java
index c39c80c600d..12346da3ee2 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/SampleClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/SampleClient.java
@@ -36,7 +36,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -45,7 +45,7 @@
 
 /**
  * This class contains methods for the Sample webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: samples
  */
 public class SampleClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/StudyClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/StudyClient.java
index a3624af0628..59756fd7d52 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/StudyClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/StudyClient.java
@@ -45,7 +45,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -54,7 +54,7 @@
 
 /**
  * This class contains methods for the Study webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: studies
  */
 public class StudyClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/UserClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/UserClient.java
index d7e7aba13b7..c90bfd45d6b 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/UserClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/UserClient.java
@@ -36,7 +36,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -45,7 +45,7 @@
 
 /**
  * This class contains methods for the User webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: users
  */
 public class UserClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/VariantClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/VariantClient.java
index b352bbbea93..ca8635f527a 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/VariantClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/VariantClient.java
@@ -62,7 +62,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -71,7 +71,7 @@
 
 /**
  * This class contains methods for the Variant webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: analysis/variant
  */
 public class VariantClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/VariantOperationClient.java b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/VariantOperationClient.java
index 9d0805fb31d..0010eb4f421 100644
--- a/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/VariantOperationClient.java
+++ b/opencga-client/src/main/java/org/opencb/opencga/client/rest/clients/VariantOperationClient.java
@@ -50,7 +50,7 @@
 * WARNING: AUTOGENERATED CODE
 *
 * This code was generated by a tool.
-* Autogenerated on: 2023-11-13
+* Autogenerated on: 2023-11-21
 *
 * Manual changes to this file may cause unexpected behavior in your application.
 * Manual changes to this file will be overwritten if the code is regenerated.
@@ -59,7 +59,7 @@
 
 /**
  * This class contains methods for the VariantOperation webservices.
- *    Client version: 2.12.0-SNAPSHOT
+ *    Client version: 2.12.1-SNAPSHOT
  *    PATH: operation
  */
 public class VariantOperationClient extends AbstractParentClient {
diff --git a/opencga-client/src/main/javascript/Admin.js b/opencga-client/src/main/javascript/Admin.js
index 10d1651c0ef..ae4ecad6de0 100644
--- a/opencga-client/src/main/javascript/Admin.js
+++ b/opencga-client/src/main/javascript/Admin.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Alignment.js b/opencga-client/src/main/javascript/Alignment.js
index 3a70cebf815..74e50dd5dfc 100644
--- a/opencga-client/src/main/javascript/Alignment.js
+++ b/opencga-client/src/main/javascript/Alignment.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/ClinicalAnalysis.js b/opencga-client/src/main/javascript/ClinicalAnalysis.js
index 3eb5e309355..ed55809ab52 100644
--- a/opencga-client/src/main/javascript/ClinicalAnalysis.js
+++ b/opencga-client/src/main/javascript/ClinicalAnalysis.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Cohort.js b/opencga-client/src/main/javascript/Cohort.js
index 2c3f06ac6b7..60b4352621f 100644
--- a/opencga-client/src/main/javascript/Cohort.js
+++ b/opencga-client/src/main/javascript/Cohort.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/DiseasePanel.js b/opencga-client/src/main/javascript/DiseasePanel.js
index ffffef0f04d..f6bbac654c9 100644
--- a/opencga-client/src/main/javascript/DiseasePanel.js
+++ b/opencga-client/src/main/javascript/DiseasePanel.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Family.js b/opencga-client/src/main/javascript/Family.js
index 0f8a88dea2e..0269e3aade4 100644
--- a/opencga-client/src/main/javascript/Family.js
+++ b/opencga-client/src/main/javascript/Family.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/File.js b/opencga-client/src/main/javascript/File.js
index 96274cd68f9..c1bc508be19 100644
--- a/opencga-client/src/main/javascript/File.js
+++ b/opencga-client/src/main/javascript/File.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/GA4GH.js b/opencga-client/src/main/javascript/GA4GH.js
index c2b83325104..24a2b3549b7 100644
--- a/opencga-client/src/main/javascript/GA4GH.js
+++ b/opencga-client/src/main/javascript/GA4GH.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Individual.js b/opencga-client/src/main/javascript/Individual.js
index 0195ce72da8..e2379cf23c1 100644
--- a/opencga-client/src/main/javascript/Individual.js
+++ b/opencga-client/src/main/javascript/Individual.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Job.js b/opencga-client/src/main/javascript/Job.js
index 08de7c4b994..6ad0b13df0a 100644
--- a/opencga-client/src/main/javascript/Job.js
+++ b/opencga-client/src/main/javascript/Job.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Meta.js b/opencga-client/src/main/javascript/Meta.js
index 8b88961f17b..36ae34309b9 100644
--- a/opencga-client/src/main/javascript/Meta.js
+++ b/opencga-client/src/main/javascript/Meta.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Project.js b/opencga-client/src/main/javascript/Project.js
index ae5e1375a84..b885aa0f47d 100644
--- a/opencga-client/src/main/javascript/Project.js
+++ b/opencga-client/src/main/javascript/Project.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Sample.js b/opencga-client/src/main/javascript/Sample.js
index 56aa472e498..df98105cf52 100644
--- a/opencga-client/src/main/javascript/Sample.js
+++ b/opencga-client/src/main/javascript/Sample.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Study.js b/opencga-client/src/main/javascript/Study.js
index d94ee0162b4..e49505ffb54 100644
--- a/opencga-client/src/main/javascript/Study.js
+++ b/opencga-client/src/main/javascript/Study.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/User.js b/opencga-client/src/main/javascript/User.js
index ac6baacb6b7..ce5c939d795 100644
--- a/opencga-client/src/main/javascript/User.js
+++ b/opencga-client/src/main/javascript/User.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/Variant.js b/opencga-client/src/main/javascript/Variant.js
index cf770869729..c20587da1a2 100644
--- a/opencga-client/src/main/javascript/Variant.js
+++ b/opencga-client/src/main/javascript/Variant.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/javascript/VariantOperation.js b/opencga-client/src/main/javascript/VariantOperation.js
index 0d477d3ca00..1258093c63a 100644
--- a/opencga-client/src/main/javascript/VariantOperation.js
+++ b/opencga-client/src/main/javascript/VariantOperation.js
@@ -12,7 +12,7 @@
  * WARNING: AUTOGENERATED CODE
  * 
  * This code was generated by a tool.
- * Autogenerated on: 2023-11-13
+ * Autogenerated on: 2023-11-21
  * 
  * Manual changes to this file may cause unexpected behavior in your application.
  * Manual changes to this file will be overwritten if the code is regenerated. 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/admin_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/admin_client.py
index 00faf6b7311..4a5396ee94d 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/admin_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/admin_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Admin(_ParentRestClient):
     """
     This class contains methods for the 'Admin' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/admin
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/alignment_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/alignment_client.py
index da4e6ed6979..ddd22c8b5f6 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/alignment_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/alignment_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Alignment(_ParentRestClient):
     """
     This class contains methods for the 'Analysis - Alignment' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/analysis/alignment
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/clinical_analysis_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/clinical_analysis_client.py
index 18cb0444591..349eadc2182 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/clinical_analysis_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/clinical_analysis_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class ClinicalAnalysis(_ParentRestClient):
     """
     This class contains methods for the 'Analysis - Clinical' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/analysis/clinical
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/cohort_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/cohort_client.py
index 7d54679aee4..1de3e0ed592 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/cohort_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/cohort_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Cohort(_ParentRestClient):
     """
     This class contains methods for the 'Cohorts' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/cohorts
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/disease_panel_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/disease_panel_client.py
index ef5dc901800..60340ec0b23 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/disease_panel_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/disease_panel_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class DiseasePanel(_ParentRestClient):
     """
     This class contains methods for the 'Disease Panels' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/panels
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/family_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/family_client.py
index b84f8978d8d..dc4009aec05 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/family_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/family_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Family(_ParentRestClient):
     """
     This class contains methods for the 'Families' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/families
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/file_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/file_client.py
index 4fab8a41a57..3f5c805c15d 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/file_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/file_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class File(_ParentRestClient):
     """
     This class contains methods for the 'Files' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/files
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/ga4gh_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/ga4gh_client.py
index 20453644c8c..5abb3fe6d58 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/ga4gh_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/ga4gh_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class GA4GH(_ParentRestClient):
     """
     This class contains methods for the 'GA4GH' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/ga4gh
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/individual_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/individual_client.py
index f92f31002b9..2b1fa810d9a 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/individual_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/individual_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Individual(_ParentRestClient):
     """
     This class contains methods for the 'Individuals' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/individuals
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/job_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/job_client.py
index e3fd92d265b..ae188fd17cc 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/job_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/job_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Job(_ParentRestClient):
     """
     This class contains methods for the 'Jobs' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/jobs
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/meta_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/meta_client.py
index 1179bd290c5..6b5eaca3dc0 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/meta_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/meta_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Meta(_ParentRestClient):
     """
     This class contains methods for the 'Meta' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/meta
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/project_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/project_client.py
index 7d647e89b6b..7a80400e608 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/project_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/project_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Project(_ParentRestClient):
     """
     This class contains methods for the 'Projects' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/projects
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/sample_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/sample_client.py
index d6e12e0645b..6308e43511f 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/sample_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/sample_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Sample(_ParentRestClient):
     """
     This class contains methods for the 'Samples' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/samples
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/study_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/study_client.py
index 2299432a49b..5eba973d147 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/study_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/study_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Study(_ParentRestClient):
     """
     This class contains methods for the 'Studies' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/studies
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/user_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/user_client.py
index 714b7116678..60d21d9ce9b 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/user_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/user_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class User(_ParentRestClient):
     """
     This class contains methods for the 'Users' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/users
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/variant_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/variant_client.py
index a407439994f..08c8e1b19fb 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/variant_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/variant_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class Variant(_ParentRestClient):
     """
     This class contains methods for the 'Analysis - Variant' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/analysis/variant
     """
 
diff --git a/opencga-client/src/main/python/pyopencga/rest_clients/variant_operation_client.py b/opencga-client/src/main/python/pyopencga/rest_clients/variant_operation_client.py
index 8b0f6ac08bd..c07754aa34d 100644
--- a/opencga-client/src/main/python/pyopencga/rest_clients/variant_operation_client.py
+++ b/opencga-client/src/main/python/pyopencga/rest_clients/variant_operation_client.py
@@ -2,7 +2,7 @@
 WARNING: AUTOGENERATED CODE
 
     This code was generated by a tool.
-    Autogenerated on: 2023-11-13
+    Autogenerated on: 2023-11-21
     
     Manual changes to this file may cause unexpected behavior in your application.
     Manual changes to this file will be overwritten if the code is regenerated.
@@ -14,7 +14,7 @@
 class VariantOperation(_ParentRestClient):
     """
     This class contains methods for the 'Operations - Variant Storage' webservices
-    Client version: 2.12.0-SNAPSHOT
+    Client version: 2.12.1-SNAPSHOT
     PATH: /{apiVersion}/operation
     """
 
diff --git a/opencga-core/src/main/java/org/opencb/opencga/core/models/file/FileStatus.java b/opencga-core/src/main/java/org/opencb/opencga/core/models/file/FileStatus.java
index 04ee6363d47..e35f463b9c6 100644
--- a/opencga-core/src/main/java/org/opencb/opencga/core/models/file/FileStatus.java
+++ b/opencga-core/src/main/java/org/opencb/opencga/core/models/file/FileStatus.java
@@ -33,9 +33,10 @@ public class FileStatus extends InternalStatus {
     public static final String DELETING = "DELETING"; // This status is set exactly before deleting the file from disk.
     public static final String REMOVED = "REMOVED";
     public static final String MISSING_SAMPLES = "MISSING_SAMPLES";
+    public static final String ERROR = "ERROR";
 
     public static final List<String> STATUS_LIST = Arrays.asList(READY, DELETED, TRASHED, STAGE, MISSING, PENDING_DELETE, DELETING,
-            REMOVED, MISSING_SAMPLES);
+            REMOVED, MISSING_SAMPLES, ERROR);
 
     public FileStatus(String status, String message) {
         if (isValid(status)) {
@@ -59,7 +60,7 @@ public static boolean isValid(String status) {
         }
         if (status != null && (status.equals(STAGE) || status.equals(MISSING) || status.equals(TRASHED)
                 || status.equals(PENDING_DELETE) || status.equals(DELETING) || status.equals(REMOVED)
-                || status.equals(MISSING_SAMPLES))) {
+                || status.equals(MISSING_SAMPLES) || status.equals(ERROR))) {
             return true;
         }
         return false;
diff --git a/opencga-master/src/main/java/org/opencb/opencga/master/monitor/daemons/ExecutionDaemon.java b/opencga-master/src/main/java/org/opencb/opencga/master/monitor/daemons/ExecutionDaemon.java
index e7920c53303..602257b4fb2 100644
--- a/opencga-master/src/main/java/org/opencb/opencga/master/monitor/daemons/ExecutionDaemon.java
+++ b/opencga-master/src/main/java/org/opencb/opencga/master/monitor/daemons/ExecutionDaemon.java
@@ -986,7 +986,7 @@ private int processFinishedJob(Job job, Enums.ExecutionStatus status) {
             registeredFiles = fileManager.syncUntrackedFiles(job.getStudy().getId(), job.getOutDir().getPath(), uriPredicate, job.getId(),
                     token).getResults();
         } catch (CatalogException e) {
-            logger.error("Could not registered files in Catalog: {}", e.getMessage(), e);
+            logger.error("Could not register files in Catalog: {}", e.getMessage(), e);
             return 0;
         }
 
diff --git a/opencga-master/src/test/java/org/opencb/opencga/master/monitor/daemons/ExecutionDaemonTest.java b/opencga-master/src/test/java/org/opencb/opencga/master/monitor/daemons/ExecutionDaemonTest.java
index e04aee848ae..2251f2b5b09 100644
--- a/opencga-master/src/test/java/org/opencb/opencga/master/monitor/daemons/ExecutionDaemonTest.java
+++ b/opencga-master/src/test/java/org/opencb/opencga/master/monitor/daemons/ExecutionDaemonTest.java
@@ -37,7 +37,9 @@
 import org.opencb.opencga.core.exceptions.ToolException;
 import org.opencb.opencga.core.models.AclParams;
 import org.opencb.opencga.core.models.common.Enums;
+import org.opencb.opencga.core.models.file.File;
 import org.opencb.opencga.core.models.file.FileContent;
+import org.opencb.opencga.core.models.file.FileStatus;
 import org.opencb.opencga.core.models.job.Job;
 import org.opencb.opencga.core.models.job.JobInternal;
 import org.opencb.opencga.core.models.job.JobInternalWebhook;
@@ -52,6 +54,7 @@
 import org.opencb.opencga.master.monitor.models.PrivateJobUpdateParams;
 
 import java.io.ByteArrayInputStream;
+import java.io.IOException;
 import java.io.InputStream;
 import java.net.URI;
 import java.net.URL;
@@ -538,6 +541,34 @@ public void testRunJobFailMissingExecutionResult() throws Exception {
         assertEquals("Job could not finish successfully. Missing execution result", getJob(jobId).getInternal().getStatus().getDescription());
     }
 
+    @Test
+    public void registerMalformedVcfFromExecutedJobTest() throws CatalogException {
+        HashMap<String, Object> params = new HashMap<>();
+        params.put(ExecutionDaemon.OUTDIR_PARAM, "outputDir/");
+        Job job = catalogManager.getJobManager().submit(studyFqn, "variant-index", Enums.Priority.MEDIUM, params, token).first();
+        String jobId = job.getId();
+
+        daemon.checkJobs();
+        job = catalogManager.getJobManager().get(studyFqn, jobId, QueryOptions.empty(), token).first();
+        executor.jobStatus.put(jobId, Enums.ExecutionStatus.READY);
+        try {
+            // Create an empty VCF file (this will fail because OpenCGA will not be able to parse it)
+            Path vcffile = Paths.get(job.getOutDir().getUri()).resolve("myemptyvcf.vcf");
+            Files.createFile(vcffile);
+        } catch (IOException e) {
+            throw new RuntimeException(e);
+        }
+
+        daemon.checkJobs();
+
+        // Check the file has been properly registered
+        job = catalogManager.getJobManager().get(studyFqn, jobId, QueryOptions.empty(), token).first();
+        assertEquals(1, job.getOutput().size());
+        assertEquals("myemptyvcf.vcf", job.getOutput().get(0).getName());
+        assertEquals(File.Format.VCF, job.getOutput().get(0).getFormat());
+        assertEquals(FileStatus.ERROR, job.getOutput().get(0).getInternal().getStatus().getId());
+    }
+
     private void checkStatus(Job job, String status) {
         assertEquals(status, job.getInternal().getStatus().getId());
         assertEquals(status, job.getInternal().getStatus().getName());
diff --git a/pom.xml b/pom.xml
index b3ac04f3d10..063b5446550 100644
--- a/pom.xml
+++ b/pom.xml
@@ -49,6 +49,7 @@
         <biodata.version>2.12.1-SNAPSHOT</biodata.version>
         <java-common-libs.version>4.12.1-SNAPSHOT</java-common-libs.version>
         <iva.version>2.12.1-SNAPSHOT</iva.version>
+
         <oskar.version>0.2.0</oskar.version>
 
         <jackson.version>2.11.4</jackson.version>