diff --git a/DESCRIPTION b/DESCRIPTION index 1193cce..a433857 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: Covid19CharacterizationCharybdis Type: Package Title: Characterizing Health Associated Risks, and Your Baseline Disease In SARS-COV-2 (CHARYBDIS) -Version: 1.4.1 +Version: 1.4.3 Author: Anthony G. Sena [aut, cre] Maintainer: Anthony G. Sena Description: Describe the baseline demographic, clinical characteristics, treatments and outcomes of interest among individuals tested for SARS-CoV-2 and/or diagnosed with COVID-19 overall and stratified by sex, age and specific comorbidities. This package also describes the same baseline and outcomes for patients hospitalized with influenza between September 2017 and April 2018. diff --git a/extras/PackageMaintenance.R b/extras/PackageMaintenance.R index 6436a22..c36aa26 100644 --- a/extras/PackageMaintenance.R +++ b/extras/PackageMaintenance.R @@ -255,4 +255,9 @@ readr::write_csv(targetStrataXRef, file.path(settingsPath, "targetStrataXref.csv # Store environment in which the study was executed ----------------------- -OhdsiRTools::insertEnvironmentSnapshotInPackage("Covid19CharacterizationCharybdis") \ No newline at end of file +OhdsiRTools::insertEnvironmentSnapshotInPackage("Covid19CharacterizationCharybdis") + +packageFiles <- list.files(path=".", recursive = TRUE) +if (!all(utf8::utf8_valid(packageFiles))) { + print("Found invalid UTF-8 encoded files") +} \ No newline at end of file diff --git a/inst/cohorts/118.json b/inst/cohorts/118.json index 673d20f..a72e471 100644 --- a/inst/cohorts/118.json +++ b/inst/cohorts/118.json @@ -669,7 +669,7 @@ { "concept": { "CONCEPT_ID": 254443, - "CONCEPT_NAME": "Sjögren's syndrome", + "CONCEPT_NAME": "Sjogren's syndrome", "STANDARD_CONCEPT": "S", "STANDARD_CONCEPT_CAPTION": "Standard", "INVALID_REASON": "V", diff --git a/inst/cohorts/119.json b/inst/cohorts/119.json index 206ab78..b62cea0 100644 --- a/inst/cohorts/119.json +++ b/inst/cohorts/119.json @@ -770,7 +770,7 @@ }, { "id": 2, - "name": "COPD mono-therapy\n", + "name": "COPD mono-therapy", "expression": { "items": [ { diff --git a/inst/cohorts/199.json b/inst/cohorts/199.json index 17f8ec2..99fa1a4 100644 --- a/inst/cohorts/199.json +++ b/inst/cohorts/199.json @@ -6359,7 +6359,7 @@ { "concept": { "CONCEPT_ID": 4221837, - "CONCEPT_NAME": "Klumpke-Déjerine paralysis", + "CONCEPT_NAME": "Klumpke-Dejerine paralysis", "STANDARD_CONCEPT": "S", "STANDARD_CONCEPT_CAPTION": "Standard", "INVALID_REASON": "V",