diff --git a/src/ontology/bridge/cl-bridge-to-caro.owl b/src/ontology/bridge/cl-bridge-to-caro.owl
index 6be863a80..e1a358d14 100644
--- a/src/ontology/bridge/cl-bridge-to-caro.owl
+++ b/src/ontology/bridge/cl-bridge-to-caro.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/cl-bridge-to-ehdaa2.owl b/src/ontology/bridge/cl-bridge-to-ehdaa2.owl
index d63abff06..d3cfac84a 100644
--- a/src/ontology/bridge/cl-bridge-to-ehdaa2.owl
+++ b/src/ontology/bridge/cl-bridge-to-ehdaa2.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Jonathan Bard
CL editors
Equivalence axioms between EHDAA2 and CL. EHDAA2 replaces EHDAA.
diff --git a/src/ontology/bridge/cl-bridge-to-emapa.owl b/src/ontology/bridge/cl-bridge-to-emapa.owl
index 9de670282..7c196059e 100644
--- a/src/ontology/bridge/cl-bridge-to-emapa.owl
+++ b/src/ontology/bridge/cl-bridge-to-emapa.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Anne Niknejad
Aurelie Comte
CL editors
diff --git a/src/ontology/bridge/cl-bridge-to-fbbt.owl b/src/ontology/bridge/cl-bridge-to-fbbt.owl
index db4de3fac..b6bfea70b 100644
--- a/src/ontology/bridge/cl-bridge-to-fbbt.owl
+++ b/src/ontology/bridge/cl-bridge-to-fbbt.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
David Osumi-Sutherland
CL editors
Taxonomic equivalence axioms between the Drosophila Anatomy Ontology and CL.
@@ -593,7 +593,7 @@
- pole cell (drosophila)
+ pole cell (D melanogaster)
@@ -612,7 +612,7 @@
- epithelial cell (drosophila)
+ epithelial cell (D melanogaster)
@@ -631,7 +631,7 @@
- cardioblast (sensu Arthropoda) (drosophila)
+ cardioblast (sensu Arthropoda) (D melanogaster)
@@ -650,7 +650,7 @@
- plasmatocyte (drosophila)
+ plasmatocyte (D melanogaster)
@@ -669,7 +669,7 @@
- lamellocyte (drosophila)
+ lamellocyte (D melanogaster)
@@ -688,7 +688,7 @@
- procrystal cell (drosophila)
+ procrystal cell (D melanogaster)
@@ -707,7 +707,7 @@
- embryonic crystal cell (drosophila)
+ embryonic crystal cell (D melanogaster)
@@ -726,7 +726,7 @@
- histoblast (drosophila)
+ histoblast (D melanogaster)
@@ -745,7 +745,7 @@
- adepithelial cell (drosophila)
+ adepithelial cell (D melanogaster)
@@ -764,7 +764,7 @@
- insect flight muscle cell (drosophila)
+ insect flight muscle cell (D melanogaster)
@@ -783,7 +783,7 @@
- Kenyon cell (drosophila)
+ Kenyon cell (D melanogaster)
@@ -802,7 +802,7 @@
- peptidergic neuron (drosophila)
+ peptidergic neuron (D melanogaster)
@@ -821,7 +821,7 @@
- compound eye cone cell (drosophila)
+ compound eye cone cell (D melanogaster)
@@ -840,7 +840,7 @@
- photoreceptor cell (drosophila)
+ photoreceptor cell (D melanogaster)
@@ -859,7 +859,7 @@
- R1 photoreceptor cell (drosophila)
+ R1 photoreceptor cell (D melanogaster)
@@ -878,7 +878,7 @@
- R2 photoreceptor cell (drosophila)
+ R2 photoreceptor cell (D melanogaster)
@@ -897,7 +897,7 @@
- R3 photoreceptor cell (drosophila)
+ R3 photoreceptor cell (D melanogaster)
@@ -916,7 +916,7 @@
- R4 photoreceptor cell (drosophila)
+ R4 photoreceptor cell (D melanogaster)
@@ -935,7 +935,7 @@
- R5 photoreceptor cell (drosophila)
+ R5 photoreceptor cell (D melanogaster)
@@ -954,7 +954,7 @@
- R6 photoreceptor cell (drosophila)
+ R6 photoreceptor cell (D melanogaster)
@@ -973,7 +973,7 @@
- R7 photoreceptor cell (drosophila)
+ R7 photoreceptor cell (D melanogaster)
@@ -992,7 +992,7 @@
- R8 photoreceptor cell (drosophila)
+ R8 photoreceptor cell (D melanogaster)
@@ -1011,7 +1011,7 @@
- visual pigment cell (sensu Nematoda and Protostomia) (drosophila)
+ visual pigment cell (sensu Nematoda and Protostomia) (D melanogaster)
@@ -1030,7 +1030,7 @@
- germ line stem cell (drosophila)
+ germ line stem cell (D melanogaster)
@@ -1049,7 +1049,7 @@
- female germ line stem cell (drosophila)
+ female germ line stem cell (D melanogaster)
@@ -1068,7 +1068,7 @@
- invertebrate nurse cell (drosophila)
+ invertebrate nurse cell (D melanogaster)
@@ -1087,7 +1087,7 @@
- oocyte (drosophila)
+ oocyte (D melanogaster)
@@ -1106,7 +1106,7 @@
- follicle stem cell (sensu Arthropoda) (drosophila)
+ follicle stem cell (sensu Arthropoda) (D melanogaster)
@@ -1125,7 +1125,7 @@
- follicle cell of egg chamber (drosophila)
+ follicle cell of egg chamber (D melanogaster)
@@ -1144,7 +1144,7 @@
- border follicle cell (drosophila)
+ border follicle cell (D melanogaster)
@@ -1163,7 +1163,7 @@
- centripetally migrating follicle cell (drosophila)
+ centripetally migrating follicle cell (D melanogaster)
@@ -1182,7 +1182,7 @@
- interfollicle cell (drosophila)
+ interfollicle cell (D melanogaster)
@@ -1201,7 +1201,7 @@
- male germ line stem cell (drosophila)
+ male germ line stem cell (D melanogaster)
@@ -1220,7 +1220,7 @@
- spermatogonium (drosophila)
+ spermatogonium (D melanogaster)
@@ -1239,7 +1239,7 @@
- spermatogonium (drosophila)
+ spermatogonium (D melanogaster)
@@ -1258,7 +1258,7 @@
- spermatocyte (drosophila)
+ spermatocyte (D melanogaster)
@@ -1277,7 +1277,7 @@
- secondary spermatocyte (drosophila)
+ secondary spermatocyte (D melanogaster)
@@ -1296,7 +1296,7 @@
- spermatid (drosophila)
+ spermatid (D melanogaster)
@@ -1315,7 +1315,7 @@
- sperm (drosophila)
+ sperm (D melanogaster)
@@ -1334,7 +1334,7 @@
- epidermoblast (drosophila)
+ epidermoblast (D melanogaster)
@@ -1353,7 +1353,7 @@
- oenocyte (drosophila)
+ oenocyte (D melanogaster)
@@ -1372,7 +1372,7 @@
- open tracheal system tracheocyte (drosophila)
+ open tracheal system tracheocyte (D melanogaster)
@@ -1391,7 +1391,7 @@
- pericardial nephrocyte (drosophila)
+ pericardial nephrocyte (D melanogaster)
@@ -1410,7 +1410,7 @@
- garland cell (drosophila)
+ garland cell (D melanogaster)
@@ -1429,7 +1429,7 @@
- prohemocyte (sensu Nematoda and Protostomia) (drosophila)
+ prohemocyte (sensu Nematoda and Protostomia) (D melanogaster)
@@ -1448,7 +1448,7 @@
- hemocyte (sensu Arthropoda) (drosophila)
+ hemocyte (sensu Arthropoda) (D melanogaster)
@@ -1467,7 +1467,7 @@
- visceral muscle cell (drosophila)
+ visceral muscle cell (D melanogaster)
@@ -1486,7 +1486,7 @@
- somatic muscle cell (drosophila)
+ somatic muscle cell (D melanogaster)
@@ -1505,7 +1505,7 @@
- muscle cell (drosophila)
+ muscle cell (D melanogaster)
@@ -1524,7 +1524,7 @@
- myoblast (drosophila)
+ myoblast (D melanogaster)
@@ -1543,7 +1543,7 @@
- neuron (drosophila)
+ neuron (D melanogaster)
@@ -1562,7 +1562,7 @@
- motor neuron (drosophila)
+ motor neuron (D melanogaster)
@@ -1581,7 +1581,7 @@
- sensory neuron (drosophila)
+ sensory neuron (D melanogaster)
@@ -1600,7 +1600,7 @@
- interneuron (drosophila)
+ interneuron (D melanogaster)
@@ -1619,7 +1619,7 @@
- pioneer neuron (drosophila)
+ pioneer neuron (D melanogaster)
@@ -1638,7 +1638,7 @@
- neuroendocrine cell (drosophila)
+ neuroendocrine cell (D melanogaster)
@@ -1657,7 +1657,7 @@
- dopaminergic neuron (drosophila)
+ dopaminergic neuron (D melanogaster)
@@ -1676,7 +1676,7 @@
- serotonergic neuron (drosophila)
+ serotonergic neuron (D melanogaster)
@@ -1695,7 +1695,7 @@
- glial cell (drosophila)
+ glial cell (D melanogaster)
@@ -1714,7 +1714,7 @@
- glioblast (sensu Nematoda and Protostomia) (drosophila)
+ glioblast (sensu Nematoda and Protostomia) (D melanogaster)
@@ -1733,7 +1733,7 @@
- neuroblast (sensu Nematoda and Protostomia) (drosophila)
+ neuroblast (sensu Nematoda and Protostomia) (D melanogaster)
@@ -1752,7 +1752,7 @@
- neuroglioblast (sensu Nematoda and Protostomia) (drosophila)
+ neuroglioblast (sensu Nematoda and Protostomia) (D melanogaster)
@@ -1771,7 +1771,7 @@
- ganglion mother cell (drosophila)
+ ganglion mother cell (D melanogaster)
@@ -1790,7 +1790,7 @@
- trichogen cell (drosophila)
+ trichogen cell (D melanogaster)
@@ -1809,7 +1809,7 @@
- tormogen cell (drosophila)
+ tormogen cell (D melanogaster)
@@ -1828,7 +1828,7 @@
- thecogen cell (drosophila)
+ thecogen cell (D melanogaster)
@@ -1847,7 +1847,7 @@
- scolopale cell (drosophila)
+ scolopale cell (D melanogaster)
@@ -1866,7 +1866,7 @@
- scolopidial ligament cell (drosophila)
+ scolopidial ligament cell (D melanogaster)
@@ -1885,7 +1885,7 @@
- gamete (drosophila)
+ gamete (D melanogaster)
@@ -1904,7 +1904,7 @@
- Malpighian tubule stellate cell (drosophila)
+ Malpighian tubule stellate cell (D melanogaster)
@@ -1923,7 +1923,7 @@
- myotube (drosophila)
+ myotube (D melanogaster)
@@ -1942,7 +1942,7 @@
- lymph gland hemocyte (drosophila)
+ lymph gland hemocyte (D melanogaster)
@@ -1961,7 +1961,7 @@
- compound eye photoreceptor cell (drosophila)
+ compound eye photoreceptor cell (D melanogaster)
@@ -1980,7 +1980,7 @@
- cell (drosophila)
+ cell (D melanogaster)
@@ -1999,7 +1999,7 @@
- imaginal disc cell (drosophila)
+ imaginal disc cell (D melanogaster)
@@ -2018,7 +2018,7 @@
- cholinergic neuron (drosophila)
+ cholinergic neuron (D melanogaster)
@@ -2037,7 +2037,7 @@
- GABAergic neuron (drosophila)
+ GABAergic neuron (D melanogaster)
@@ -2056,7 +2056,7 @@
- epidermal cell (sensu Arthropoda) (drosophila)
+ epidermal cell (sensu Arthropoda) (D melanogaster)
@@ -2075,7 +2075,7 @@
- histaminergic neuron (drosophila)
+ histaminergic neuron (D melanogaster)
@@ -2094,7 +2094,7 @@
- glycinergic neuron (drosophila)
+ glycinergic neuron (D melanogaster)
@@ -2113,7 +2113,7 @@
- egg cell (drosophila)
+ egg cell (D melanogaster)
@@ -2132,7 +2132,7 @@
- juvenile hormone secreting cell (drosophila)
+ juvenile hormone secreting cell (D melanogaster)
@@ -2151,7 +2151,7 @@
- glutamatergic neuron (drosophila)
+ glutamatergic neuron (D melanogaster)
diff --git a/src/ontology/bridge/cl-bridge-to-fma.owl b/src/ontology/bridge/cl-bridge-to-fma.owl
index 7d727f271..18ed34940 100644
--- a/src/ontology/bridge/cl-bridge-to-fma.owl
+++ b/src/ontology/bridge/cl-bridge-to-fma.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Onard Mejino
Terry Hayamizu
CL editors
@@ -2026,12 +2026,6 @@
-
-
-
-
-
-
@@ -8124,7 +8118,7 @@
-
+
@@ -8132,7 +8126,7 @@
- surface mucosal cell of stomach (post-embryonic human)
+ foveolar cell of stomach (post-embryonic human)
@@ -10678,7 +10672,7 @@
- ciliated columnar cell of tracheobronchial tree (post-embryonic human)
+ multiciliated columnar cell of tracheobronchial tree (post-embryonic human)
@@ -11856,7 +11850,7 @@
- acinar cell of sebaceous gland (post-embryonic human)
+ skin sebocyte (post-embryonic human)
@@ -16245,7 +16239,7 @@
- glandular cell of endometrium (post-embryonic human)
+ glandular endometrial unciliated epithelial cell (post-embryonic human)
@@ -16283,7 +16277,7 @@
- glandular epithelial cell (post-embryonic human)
+ glandular secretory epithelial cell (post-embryonic human)
@@ -16853,7 +16847,7 @@
- small intestine glandular cell (post-embryonic human)
+ small intestine secretory cell (post-embryonic human)
diff --git a/src/ontology/bridge/cl-bridge-to-go.owl b/src/ontology/bridge/cl-bridge-to-go.owl
index d61d252da..f1d6b5aeb 100644
--- a/src/ontology/bridge/cl-bridge-to-go.owl
+++ b/src/ontology/bridge/cl-bridge-to-go.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/cl-bridge-to-kupo.owl b/src/ontology/bridge/cl-bridge-to-kupo.owl
index 8ea4d562d..c414ca4ba 100644
--- a/src/ontology/bridge/cl-bridge-to-kupo.owl
+++ b/src/ontology/bridge/cl-bridge-to-kupo.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/cl-bridge-to-ma.owl b/src/ontology/bridge/cl-bridge-to-ma.owl
index 11d43e367..d3579f534 100644
--- a/src/ontology/bridge/cl-bridge-to-ma.owl
+++ b/src/ontology/bridge/cl-bridge-to-ma.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
George Gkoutos
CL editors
Terry Hayamizu
diff --git a/src/ontology/bridge/cl-bridge-to-ncit.owl b/src/ontology/bridge/cl-bridge-to-ncit.owl
index 3c5c1e829..86ddb7d47 100644
--- a/src/ontology/bridge/cl-bridge-to-ncit.owl
+++ b/src/ontology/bridge/cl-bridge-to-ncit.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/cl-bridge-to-sctid.owl b/src/ontology/bridge/cl-bridge-to-sctid.owl
index 16a99f101..e9dcbc46b 100644
--- a/src/ontology/bridge/cl-bridge-to-sctid.owl
+++ b/src/ontology/bridge/cl-bridge-to-sctid.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
OBOL
CL editors
Rough subclass axioms between SNOMED-CT and CL. Note that SNOMED is not open, unlike other ontologies used in bridges here. Consequently, the mappings here are not verified to the same degree.
diff --git a/src/ontology/bridge/cl-bridge-to-wbbt.owl b/src/ontology/bridge/cl-bridge-to-wbbt.owl
index 4f7aa4324..60c0258f4 100644
--- a/src/ontology/bridge/cl-bridge-to-wbbt.owl
+++ b/src/ontology/bridge/cl-bridge-to-wbbt.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/cl-bridge-to-xao.owl b/src/ontology/bridge/cl-bridge-to-xao.owl
index 6b87171e9..54f3b3ba9 100644
--- a/src/ontology/bridge/cl-bridge-to-xao.owl
+++ b/src/ontology/bridge/cl-bridge-to-xao.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Erik Segerdell
VG Ponferrada
CL editors
diff --git a/src/ontology/bridge/cl-bridge-to-zfa.owl b/src/ontology/bridge/cl-bridge-to-zfa.owl
index 203efacda..95a382b4b 100644
--- a/src/ontology/bridge/cl-bridge-to-zfa.owl
+++ b/src/ontology/bridge/cl-bridge-to-zfa.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Melissa Haendel
Veri Van Slyke
Yvonne Bradford
@@ -1193,12 +1193,6 @@
-
-
-
-
-
-
@@ -2633,6 +2627,12 @@
+
+
+
+
+
+
@@ -2772,6 +2772,25 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ middle primary motoneuron (zebrafish)
+
+
+
+
@@ -2900,7 +2919,7 @@
- multi-ciliated epithelial cell (zebrafish)
+ multiciliated epithelial cell (zebrafish)
@@ -6971,25 +6990,6 @@
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- CNS interneuron (zebrafish)
-
-
-
-
diff --git a/src/ontology/bridge/uberon-bridge-to-aeo.owl b/src/ontology/bridge/uberon-bridge-to-aeo.owl
index 6712eeb56..9ae8a07ef 100644
--- a/src/ontology/bridge/uberon-bridge-to-aeo.owl
+++ b/src/ontology/bridge/uberon-bridge-to-aeo.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-bfo.owl b/src/ontology/bridge/uberon-bridge-to-bfo.owl
index bd6b2c41e..595382139 100644
--- a/src/ontology/bridge/uberon-bridge-to-bfo.owl
+++ b/src/ontology/bridge/uberon-bridge-to-bfo.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-caro.owl b/src/ontology/bridge/uberon-bridge-to-caro.owl
index ba3143371..8d8f3c777 100644
--- a/src/ontology/bridge/uberon-bridge-to-caro.owl
+++ b/src/ontology/bridge/uberon-bridge-to-caro.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-dhba.owl b/src/ontology/bridge/uberon-bridge-to-dhba.owl
index 6118facec..1a11a43c6 100644
--- a/src/ontology/bridge/uberon-bridge-to-dhba.owl
+++ b/src/ontology/bridge/uberon-bridge-to-dhba.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-ehdaa2.owl b/src/ontology/bridge/uberon-bridge-to-ehdaa2.owl
index 54c871939..277c444e1 100644
--- a/src/ontology/bridge/uberon-bridge-to-ehdaa2.owl
+++ b/src/ontology/bridge/uberon-bridge-to-ehdaa2.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Jonathan Bard
Uberon editors
Equivalence axioms between EHDAA2 and Uberon. EHDAA2 replaces EHDAA.
diff --git a/src/ontology/bridge/uberon-bridge-to-emapa.owl b/src/ontology/bridge/uberon-bridge-to-emapa.owl
index b8f0c3fc8..4032b663d 100644
--- a/src/ontology/bridge/uberon-bridge-to-emapa.owl
+++ b/src/ontology/bridge/uberon-bridge-to-emapa.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Anne Niknejad
Aurelie Comte
Uberon editors
diff --git a/src/ontology/bridge/uberon-bridge-to-fbbt.owl b/src/ontology/bridge/uberon-bridge-to-fbbt.owl
index 697c4797e..485e65118 100644
--- a/src/ontology/bridge/uberon-bridge-to-fbbt.owl
+++ b/src/ontology/bridge/uberon-bridge-to-fbbt.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
David Osumi-Sutherland
Uberon editors
Taxonomic equivalence axioms between the Drosophila Anatomy Ontology and Uberon.
@@ -107,7 +107,7 @@
- multicellular organism (drosophila)
+ multicellular organism (D melanogaster)
@@ -126,7 +126,7 @@
- arthropod tagma (drosophila)
+ arthropod tagma (D melanogaster)
@@ -145,7 +145,7 @@
- organismal segment (drosophila)
+ organismal segment (D melanogaster)
@@ -164,7 +164,7 @@
- panarthropod head (drosophila)
+ panarthropod head (D melanogaster)
@@ -183,7 +183,7 @@
- insect ocular segment (drosophila)
+ insect ocular segment (D melanogaster)
@@ -202,7 +202,7 @@
- insect head segment (drosophila)
+ insect head segment (D melanogaster)
@@ -221,7 +221,7 @@
- procephalic segment (drosophila)
+ procephalic segment (D melanogaster)
@@ -240,7 +240,7 @@
- labral segment (drosophila)
+ labral segment (D melanogaster)
@@ -259,7 +259,7 @@
- antennal segment (drosophila)
+ antennal segment (D melanogaster)
@@ -278,7 +278,7 @@
- insect gnathal segment (drosophila)
+ insect gnathal segment (D melanogaster)
@@ -297,7 +297,7 @@
- insect labial segment (drosophila)
+ insect labial segment (D melanogaster)
@@ -316,7 +316,7 @@
- insect thorax (drosophila)
+ insect thorax (D melanogaster)
@@ -335,7 +335,7 @@
- insect thoracic segment (drosophila)
+ insect thoracic segment (D melanogaster)
@@ -354,7 +354,7 @@
- insect prothoracic segment (drosophila)
+ insect prothoracic segment (D melanogaster)
@@ -373,7 +373,7 @@
- insect mesothoracic segment (drosophila)
+ insect mesothoracic segment (D melanogaster)
@@ -392,7 +392,7 @@
- insect metathoracic segment (drosophila)
+ insect metathoracic segment (D melanogaster)
@@ -411,7 +411,7 @@
- insect abdomen (drosophila)
+ insect abdomen (D melanogaster)
@@ -430,7 +430,7 @@
- insect abdominal segment (drosophila)
+ insect abdominal segment (D melanogaster)
@@ -449,7 +449,7 @@
- insect abdominal segment 8 (drosophila)
+ insect abdominal segment 8 (D melanogaster)
@@ -468,7 +468,7 @@
- insect abdominal segment 9 (drosophila)
+ insect abdominal segment 9 (D melanogaster)
@@ -487,7 +487,7 @@
- egg chorion (drosophila)
+ egg chorion (D melanogaster)
@@ -506,7 +506,7 @@
- vitelline membrane (drosophila)
+ vitelline membrane (D melanogaster)
@@ -525,7 +525,7 @@
- insect dorsal appendage (drosophila)
+ insect dorsal appendage (D melanogaster)
@@ -544,7 +544,7 @@
- embryo (drosophila)
+ embryo (D melanogaster)
@@ -563,7 +563,7 @@
- ventral midline (drosophila)
+ ventral midline (D melanogaster)
@@ -582,7 +582,7 @@
- amnioserosa (drosophila)
+ amnioserosa (D melanogaster)
@@ -601,7 +601,7 @@
- insect ventral furrow (drosophila)
+ insect ventral furrow (D melanogaster)
@@ -620,7 +620,7 @@
- insect cephalic furrow (drosophila)
+ insect cephalic furrow (D melanogaster)
@@ -639,7 +639,7 @@
- insect mesoderm anlage (drosophila)
+ insect mesoderm anlage (D melanogaster)
@@ -658,7 +658,7 @@
- germ layer (drosophila)
+ germ layer (D melanogaster)
@@ -677,7 +677,7 @@
- ectoderm (drosophila)
+ ectoderm (D melanogaster)
@@ -696,7 +696,7 @@
- insect dorsal ectoderm (drosophila)
+ insect dorsal ectoderm (D melanogaster)
@@ -715,7 +715,7 @@
- insect anterior ectoderm (drosophila)
+ insect anterior ectoderm (D melanogaster)
@@ -734,7 +734,7 @@
- proctodeum (drosophila)
+ proctodeum (D melanogaster)
@@ -753,7 +753,7 @@
- endoderm (drosophila)
+ endoderm (D melanogaster)
@@ -772,7 +772,7 @@
- mesoderm (drosophila)
+ mesoderm (D melanogaster)
@@ -791,7 +791,7 @@
- insect trunk mesoderm (drosophila)
+ insect trunk mesoderm (D melanogaster)
@@ -810,7 +810,7 @@
- insect visceral mesoderm (drosophila)
+ insect visceral mesoderm (D melanogaster)
@@ -829,7 +829,7 @@
- mesectoderm (drosophila)
+ mesectoderm (D melanogaster)
@@ -848,7 +848,7 @@
- embryonic tagma (drosophila)
+ embryonic tagma (D melanogaster)
@@ -867,7 +867,7 @@
- insect embryonic segment (drosophila)
+ insect embryonic segment (D melanogaster)
@@ -886,7 +886,7 @@
- embryonic head (drosophila)
+ embryonic head (D melanogaster)
@@ -905,7 +905,7 @@
- insect embryonic head segment (drosophila)
+ insect embryonic head segment (D melanogaster)
@@ -924,7 +924,7 @@
- insect embryonic procephalic segment (drosophila)
+ insect embryonic procephalic segment (D melanogaster)
@@ -943,7 +943,7 @@
- insect embryonic antennal segment (drosophila)
+ insect embryonic antennal segment (D melanogaster)
@@ -962,7 +962,7 @@
- insect embryonic gnathal segment (drosophila)
+ insect embryonic gnathal segment (D melanogaster)
@@ -981,7 +981,7 @@
- insect embryonic labial segment (drosophila)
+ insect embryonic labial segment (D melanogaster)
@@ -1000,7 +1000,7 @@
- insect embryonic thorax (drosophila)
+ insect embryonic thorax (D melanogaster)
@@ -1019,7 +1019,7 @@
- insect embryonic thoracic segment (drosophila)
+ insect embryonic thoracic segment (D melanogaster)
@@ -1038,7 +1038,7 @@
- insect embryonic prothoracic segment (drosophila)
+ insect embryonic prothoracic segment (D melanogaster)
@@ -1057,7 +1057,7 @@
- insect embryonic mesothoracic segment (drosophila)
+ insect embryonic mesothoracic segment (D melanogaster)
@@ -1076,7 +1076,7 @@
- insect embryonic metathoracic segment (drosophila)
+ insect embryonic metathoracic segment (D melanogaster)
@@ -1095,7 +1095,7 @@
- insect embryonic abdomen (drosophila)
+ insect embryonic abdomen (D melanogaster)
@@ -1114,7 +1114,7 @@
- insect embryonic abdominal segment (drosophila)
+ insect embryonic abdominal segment (D melanogaster)
@@ -1133,7 +1133,7 @@
- insect embryonic abdominal segment 8 (drosophila)
+ insect embryonic abdominal segment 8 (D melanogaster)
@@ -1152,7 +1152,7 @@
- insect embryonic abdominal segment 9 (drosophila)
+ insect embryonic abdominal segment 9 (D melanogaster)
@@ -1171,7 +1171,7 @@
- insect embryonic optic lobe primordium (drosophila)
+ insect embryonic optic lobe primordium (D melanogaster)
@@ -1190,7 +1190,7 @@
- stomodeum (drosophila)
+ stomodeum (D melanogaster)
@@ -1209,7 +1209,7 @@
- insect presumptive embryonic/larval nervous system (drosophila)
+ insect presumptive embryonic/larval nervous system (D melanogaster)
@@ -1228,7 +1228,7 @@
- insect presumptive embryonic/larval central nervous system (drosophila)
+ insect presumptive embryonic/larval central nervous system (D melanogaster)
@@ -1247,7 +1247,7 @@
- neurectoderm (drosophila)
+ neurectoderm (D melanogaster)
@@ -1266,7 +1266,7 @@
- insect visual primordium (drosophila)
+ insect visual primordium (D melanogaster)
@@ -1285,7 +1285,7 @@
- insect embryonic brain (drosophila)
+ insect embryonic brain (D melanogaster)
@@ -1304,7 +1304,7 @@
- insect proneural cluster (drosophila)
+ insect proneural cluster (D melanogaster)
@@ -1323,7 +1323,7 @@
- insect embryonic imaginal precursor (drosophila)
+ insect embryonic imaginal precursor (D melanogaster)
@@ -1342,7 +1342,7 @@
- insect imaginal disc primordium (drosophila)
+ insect imaginal disc primordium (D melanogaster)
@@ -1361,7 +1361,7 @@
- insect labial disc primordium (drosophila)
+ insect labial disc primordium (D melanogaster)
@@ -1380,7 +1380,7 @@
- insect eye-antennal disc primordium (drosophila)
+ insect eye-antennal disc primordium (D melanogaster)
@@ -1399,7 +1399,7 @@
- insect dorsal thoracic disc primordium (drosophila)
+ insect dorsal thoracic disc primordium (D melanogaster)
@@ -1418,7 +1418,7 @@
- insect dorsal mesothoracic disc primordium (drosophila)
+ insect dorsal mesothoracic disc primordium (D melanogaster)
@@ -1437,7 +1437,7 @@
- insect dorsal metathoracic disc primordium (drosophila)
+ insect dorsal metathoracic disc primordium (D melanogaster)
@@ -1456,7 +1456,7 @@
- insect ventral thoracic disc primordium (drosophila)
+ insect ventral thoracic disc primordium (D melanogaster)
@@ -1475,7 +1475,7 @@
- insect ventral prothoracic disc primordium (drosophila)
+ insect ventral prothoracic disc primordium (D melanogaster)
@@ -1494,7 +1494,7 @@
- insect genital disc primordium (drosophila)
+ insect genital disc primordium (D melanogaster)
@@ -1513,7 +1513,7 @@
- insect male genital disc primordium (drosophila)
+ insect male genital disc primordium (D melanogaster)
@@ -1532,7 +1532,7 @@
- insect female genital disc primordium (drosophila)
+ insect female genital disc primordium (D melanogaster)
@@ -1551,7 +1551,7 @@
- insect embryonic/larval circulatory system (drosophila)
+ insect embryonic/larval circulatory system (D melanogaster)
@@ -1570,7 +1570,7 @@
- insect embryonic/larval lymph gland (drosophila)
+ insect embryonic/larval lymph gland (D melanogaster)
@@ -1589,7 +1589,7 @@
- retrocerebral complex (drosophila)
+ retrocerebral complex (D melanogaster)
@@ -1608,7 +1608,7 @@
- insect ring gland (drosophila)
+ insect ring gland (D melanogaster)
@@ -1627,7 +1627,7 @@
- larva (drosophila)
+ larva (D melanogaster)
@@ -1646,7 +1646,7 @@
- insect larval tagma (drosophila)
+ insect larval tagma (D melanogaster)
@@ -1665,7 +1665,7 @@
- insect larval segment (drosophila)
+ insect larval segment (D melanogaster)
@@ -1684,7 +1684,7 @@
- insect larval head (drosophila)
+ insect larval head (D melanogaster)
@@ -1703,7 +1703,7 @@
- insect larval ocular segment (drosophila)
+ insect larval ocular segment (D melanogaster)
@@ -1722,7 +1722,7 @@
- insect larval head segment (drosophila)
+ insect larval head segment (D melanogaster)
@@ -1741,7 +1741,7 @@
- insect larval procephalic segment (drosophila)
+ insect larval procephalic segment (D melanogaster)
@@ -1760,7 +1760,7 @@
- insect larval labral segment (drosophila)
+ insect larval labral segment (D melanogaster)
@@ -1779,7 +1779,7 @@
- insect larval antennal segment (drosophila)
+ insect larval antennal segment (D melanogaster)
@@ -1798,7 +1798,7 @@
- insect larval gnathal segment (drosophila)
+ insect larval gnathal segment (D melanogaster)
@@ -1817,7 +1817,7 @@
- insect larval labial segment (drosophila)
+ insect larval labial segment (D melanogaster)
@@ -1836,7 +1836,7 @@
- insect larval thorax (drosophila)
+ insect larval thorax (D melanogaster)
@@ -1855,7 +1855,7 @@
- insect larval thoracic segment (drosophila)
+ insect larval thoracic segment (D melanogaster)
@@ -1874,7 +1874,7 @@
- insect larval prothoracic segment (drosophila)
+ insect larval prothoracic segment (D melanogaster)
@@ -1893,7 +1893,7 @@
- insect larval mesothoracic segment (drosophila)
+ insect larval mesothoracic segment (D melanogaster)
@@ -1912,7 +1912,7 @@
- insect larval metathoracic segment (drosophila)
+ insect larval metathoracic segment (D melanogaster)
@@ -1931,7 +1931,7 @@
- insect larval abdomen (drosophila)
+ insect larval abdomen (D melanogaster)
@@ -1950,7 +1950,7 @@
- insect larval abdominal segment (drosophila)
+ insect larval abdominal segment (D melanogaster)
@@ -1969,7 +1969,7 @@
- insect larval abdominal segment 8 (drosophila)
+ insect larval abdominal segment 8 (D melanogaster)
@@ -1988,7 +1988,7 @@
- insect larval abdominal segment 9 (drosophila)
+ insect larval abdominal segment 9 (D melanogaster)
@@ -2007,7 +2007,7 @@
- insect embryonic/larval imaginal precursor (drosophila)
+ insect embryonic/larval imaginal precursor (D melanogaster)
@@ -2026,7 +2026,7 @@
- imaginal disc (drosophila)
+ imaginal disc (D melanogaster)
@@ -2045,7 +2045,7 @@
- insect labial disc (drosophila)
+ insect labial disc (D melanogaster)
@@ -2064,7 +2064,7 @@
- insect clypeo-labral disc (drosophila)
+ insect clypeo-labral disc (D melanogaster)
@@ -2083,7 +2083,7 @@
- insect eye-antennal disc (drosophila)
+ insect eye-antennal disc (D melanogaster)
@@ -2102,7 +2102,7 @@
- insect antennal disc (drosophila)
+ insect antennal disc (D melanogaster)
@@ -2121,7 +2121,7 @@
- insect dorsal thoracic disc (drosophila)
+ insect dorsal thoracic disc (D melanogaster)
@@ -2140,7 +2140,7 @@
- insect wing disc (drosophila)
+ insect wing disc (D melanogaster)
@@ -2159,7 +2159,7 @@
- insect haltere disc (drosophila)
+ insect haltere disc (D melanogaster)
@@ -2178,7 +2178,7 @@
- insect ventral thoracic disc (drosophila)
+ insect ventral thoracic disc (D melanogaster)
@@ -2197,7 +2197,7 @@
- insect prothoracic leg disc (drosophila)
+ insect prothoracic leg disc (D melanogaster)
@@ -2216,7 +2216,7 @@
- insect genital disc (drosophila)
+ insect genital disc (D melanogaster)
@@ -2235,7 +2235,7 @@
- insect male genital disc (drosophila)
+ insect male genital disc (D melanogaster)
@@ -2254,7 +2254,7 @@
- insect female genital disc (drosophila)
+ insect female genital disc (D melanogaster)
@@ -2273,7 +2273,7 @@
- insect histoblast nest (drosophila)
+ insect histoblast nest (D melanogaster)
@@ -2292,7 +2292,7 @@
- insect embryonic/larval digestive system (drosophila)
+ insect embryonic/larval digestive system (D melanogaster)
@@ -2311,7 +2311,7 @@
- insect cephalopharyngeal skeleton (drosophila)
+ insect cephalopharyngeal skeleton (D melanogaster)
@@ -2330,7 +2330,7 @@
- insect epipharyngeal sclerite (drosophila)
+ insect epipharyngeal sclerite (D melanogaster)
@@ -2349,7 +2349,7 @@
- insect embryonic/larval nervous system (drosophila)
+ insect embryonic/larval nervous system (D melanogaster)
@@ -2368,7 +2368,7 @@
- insect embryonic/larval central nervous system (drosophila)
+ insect embryonic/larval central nervous system (D melanogaster)
@@ -2387,7 +2387,7 @@
- insect embryonic/larval brain (drosophila)
+ insect embryonic/larval brain (D melanogaster)
@@ -2406,7 +2406,7 @@
- insect embryonic/larval protocerebrum (drosophila)
+ insect embryonic/larval protocerebrum (D melanogaster)
@@ -2425,7 +2425,7 @@
- neuron projection bundle connecting eye with brain (drosophila)
+ neuron projection bundle connecting eye with brain (D melanogaster)
@@ -2444,7 +2444,7 @@
- insect larval sense organ (drosophila)
+ insect larval sense organ (D melanogaster)
@@ -2463,7 +2463,7 @@
- insect embryonic/larval ocular segment sensillum (drosophila)
+ insect embryonic/larval ocular segment sensillum (D melanogaster)
@@ -2482,7 +2482,7 @@
- prepupa (drosophila)
+ prepupa (D melanogaster)
@@ -2501,7 +2501,7 @@
- pupa (drosophila)
+ pupa (D melanogaster)
@@ -2520,7 +2520,7 @@
- adult organism (drosophila)
+ adult organism (D melanogaster)
@@ -2539,7 +2539,7 @@
- insect adult tagma (drosophila)
+ insect adult tagma (D melanogaster)
@@ -2558,7 +2558,7 @@
- insect adult segment (drosophila)
+ insect adult segment (D melanogaster)
@@ -2577,7 +2577,7 @@
- insect adult head (drosophila)
+ insect adult head (D melanogaster)
@@ -2596,7 +2596,7 @@
- insect adult head segment (drosophila)
+ insect adult head segment (D melanogaster)
@@ -2615,7 +2615,7 @@
- insect adult procephalic segment (drosophila)
+ insect adult procephalic segment (D melanogaster)
@@ -2634,7 +2634,7 @@
- insect adult labral segment (drosophila)
+ insect adult labral segment (D melanogaster)
@@ -2653,7 +2653,7 @@
- insect adult antennal segment (drosophila)
+ insect adult antennal segment (D melanogaster)
@@ -2672,7 +2672,7 @@
- insect adult thorax (drosophila)
+ insect adult thorax (D melanogaster)
@@ -2691,7 +2691,7 @@
- insect adult thoracic segment (drosophila)
+ insect adult thoracic segment (D melanogaster)
@@ -2710,7 +2710,7 @@
- insect adult prothoracic segment (drosophila)
+ insect adult prothoracic segment (D melanogaster)
@@ -2729,7 +2729,7 @@
- insect adult mesothoracic segment (drosophila)
+ insect adult mesothoracic segment (D melanogaster)
@@ -2748,7 +2748,7 @@
- insect adult abdomen (drosophila)
+ insect adult abdomen (D melanogaster)
@@ -2767,7 +2767,7 @@
- insect adult abdominal segment (drosophila)
+ insect adult abdominal segment (D melanogaster)
@@ -2786,7 +2786,7 @@
- dorsal trunk of insect trachea (drosophila)
+ dorsal trunk of insect trachea (D melanogaster)
@@ -2805,7 +2805,7 @@
- digestive tract (drosophila)
+ digestive tract (D melanogaster)
@@ -2824,7 +2824,7 @@
- mouth (drosophila)
+ mouth (D melanogaster)
@@ -2843,7 +2843,7 @@
- dorsal vessel heart (drosophila)
+ dorsal vessel heart (D melanogaster)
@@ -2862,7 +2862,7 @@
- insect adult somatic muscle (drosophila)
+ insect adult somatic muscle (D melanogaster)
@@ -2881,7 +2881,7 @@
- insect adult nervous system (drosophila)
+ insect adult nervous system (D melanogaster)
@@ -2900,7 +2900,7 @@
- insect adult central nervous system (drosophila)
+ insect adult central nervous system (D melanogaster)
@@ -2919,7 +2919,7 @@
- insect adult brain (drosophila)
+ insect adult brain (D melanogaster)
@@ -2938,7 +2938,7 @@
- insect supraesophageal ganglion (drosophila)
+ insect supraesophageal ganglion (D melanogaster)
@@ -2957,7 +2957,7 @@
- insect protocerebrum (drosophila)
+ insect protocerebrum (D melanogaster)
@@ -2976,7 +2976,7 @@
- insect adult central complex (drosophila)
+ insect adult central complex (D melanogaster)
@@ -2995,7 +2995,7 @@
- arthropod optic lobe (drosophila)
+ arthropod optic lobe (D melanogaster)
@@ -3014,7 +3014,7 @@
- head sensillum (drosophila)
+ head sensillum (D melanogaster)
@@ -3033,7 +3033,7 @@
- compound eye corneal lens (drosophila)
+ compound eye corneal lens (D melanogaster)
@@ -3052,7 +3052,7 @@
- photoreceptor array (drosophila)
+ photoreceptor array (D melanogaster)
@@ -3071,7 +3071,7 @@
- embryonic structure (drosophila)
+ embryonic structure (D melanogaster)
@@ -3090,7 +3090,7 @@
- insect sex comb (drosophila)
+ insect sex comb (D melanogaster)
@@ -3109,7 +3109,7 @@
- insect wing hair (drosophila)
+ insect wing hair (D melanogaster)
@@ -3128,7 +3128,7 @@
- insect sclerite (drosophila)
+ insect sclerite (D melanogaster)
@@ -3147,7 +3147,7 @@
- insect tergite (drosophila)
+ insect tergite (D melanogaster)
@@ -3166,7 +3166,7 @@
- insect sternite (drosophila)
+ insect sternite (D melanogaster)
@@ -3185,7 +3185,7 @@
- insect adult external head (drosophila)
+ insect adult external head (D melanogaster)
@@ -3204,7 +3204,7 @@
- insect head capsule (drosophila)
+ insect head capsule (D melanogaster)
@@ -3223,7 +3223,7 @@
- arthropod occiput (drosophila)
+ arthropod occiput (D melanogaster)
@@ -3242,7 +3242,7 @@
- dorsal ocellus (drosophila)
+ dorsal ocellus (D melanogaster)
@@ -3261,7 +3261,7 @@
- lateral ocellus (drosophila)
+ lateral ocellus (D melanogaster)
@@ -3280,7 +3280,7 @@
- median eye (drosophila)
+ median eye (D melanogaster)
@@ -3299,7 +3299,7 @@
- compound eye (drosophila)
+ compound eye (D melanogaster)
@@ -3318,7 +3318,7 @@
- ommatidium (drosophila)
+ ommatidium (D melanogaster)
@@ -3337,7 +3337,7 @@
- antenna (drosophila)
+ antenna (D melanogaster)
@@ -3356,7 +3356,7 @@
- insect arista (drosophila)
+ insect arista (D melanogaster)
@@ -3375,7 +3375,7 @@
- insect mouthpart (drosophila)
+ insect mouthpart (D melanogaster)
@@ -3394,7 +3394,7 @@
- insect clypeus (drosophila)
+ insect clypeus (D melanogaster)
@@ -3413,7 +3413,7 @@
- insect labrum (drosophila)
+ insect labrum (D melanogaster)
@@ -3432,7 +3432,7 @@
- insect proboscis (drosophila)
+ insect proboscis (D melanogaster)
@@ -3451,7 +3451,7 @@
- insect basiproboscis (drosophila)
+ insect basiproboscis (D melanogaster)
@@ -3470,7 +3470,7 @@
- insect adult external thorax (drosophila)
+ insect adult external thorax (D melanogaster)
@@ -3489,7 +3489,7 @@
- insect tergum (drosophila)
+ insect tergum (D melanogaster)
@@ -3508,7 +3508,7 @@
- arthropod sternum (drosophila)
+ arthropod sternum (D melanogaster)
@@ -3527,7 +3527,7 @@
- insect adult external mesothorax (drosophila)
+ insect adult external mesothorax (D melanogaster)
@@ -3546,7 +3546,7 @@
- insect mesothoracic tergum (drosophila)
+ insect mesothoracic tergum (D melanogaster)
@@ -3565,7 +3565,7 @@
- insect leg (drosophila)
+ insect leg (D melanogaster)
@@ -3584,7 +3584,7 @@
- arthropod tibia (drosophila)
+ arthropod tibia (D melanogaster)
@@ -3603,7 +3603,7 @@
- insect tarsal segment (drosophila)
+ insect tarsal segment (D melanogaster)
@@ -3622,7 +3622,7 @@
- insect metatarsus (drosophila)
+ insect metatarsus (D melanogaster)
@@ -3641,7 +3641,7 @@
- insect prothoracic leg (drosophila)
+ insect prothoracic leg (D melanogaster)
@@ -3660,7 +3660,7 @@
- insect prothoracic tarsal segment (drosophila)
+ insect prothoracic tarsal segment (D melanogaster)
@@ -3679,7 +3679,7 @@
- insect prothoracic metatarsus (drosophila)
+ insect prothoracic metatarsus (D melanogaster)
@@ -3698,7 +3698,7 @@
- imaginal disc-derived wing (drosophila)
+ imaginal disc-derived wing (D melanogaster)
@@ -3717,7 +3717,7 @@
- imaginal disc-derived wing vein (drosophila)
+ imaginal disc-derived wing vein (D melanogaster)
@@ -3736,7 +3736,7 @@
- haltere (drosophila)
+ haltere (D melanogaster)
@@ -3755,7 +3755,7 @@
- insect adult external abdomen (drosophila)
+ insect adult external abdomen (D melanogaster)
@@ -3774,7 +3774,7 @@
- insect analia (drosophila)
+ insect analia (D melanogaster)
@@ -3793,7 +3793,7 @@
- insect female analia (drosophila)
+ insect female analia (D melanogaster)
@@ -3812,7 +3812,7 @@
- insect male analia (drosophila)
+ insect male analia (D melanogaster)
@@ -3831,7 +3831,7 @@
- intromittent organ (drosophila)
+ intromittent organ (D melanogaster)
@@ -3850,7 +3850,7 @@
- anatomical system (drosophila)
+ anatomical system (D melanogaster)
@@ -3869,7 +3869,7 @@
- reproductive system (drosophila)
+ reproductive system (D melanogaster)
@@ -3888,7 +3888,7 @@
- female reproductive system (drosophila)
+ female reproductive system (D melanogaster)
@@ -3907,7 +3907,7 @@
- ovary (drosophila)
+ ovary (D melanogaster)
@@ -3926,7 +3926,7 @@
- egg chamber (drosophila)
+ egg chamber (D melanogaster)
@@ -3945,7 +3945,7 @@
- spermathecum (drosophila)
+ spermathecum (D melanogaster)
@@ -3964,7 +3964,7 @@
- male reproductive system (drosophila)
+ male reproductive system (D melanogaster)
@@ -3983,7 +3983,7 @@
- testis (drosophila)
+ testis (D melanogaster)
@@ -4002,7 +4002,7 @@
- seminal fluid secreting gland (drosophila)
+ seminal fluid secreting gland (D melanogaster)
@@ -4021,7 +4021,7 @@
- integumental system (drosophila)
+ integumental system (D melanogaster)
@@ -4040,7 +4040,7 @@
- chitin-based cuticle (drosophila)
+ chitin-based cuticle (D melanogaster)
@@ -4059,7 +4059,7 @@
- exocuticle (drosophila)
+ exocuticle (D melanogaster)
@@ -4078,7 +4078,7 @@
- endocuticle (drosophila)
+ endocuticle (D melanogaster)
@@ -4097,7 +4097,7 @@
- insect trichome (drosophila)
+ insect trichome (D melanogaster)
@@ -4116,7 +4116,7 @@
- insect embryonic/larval cuticle (drosophila)
+ insect embryonic/larval cuticle (D melanogaster)
@@ -4135,7 +4135,7 @@
- insect third instar larval cuticle (drosophila)
+ insect third instar larval cuticle (D melanogaster)
@@ -4154,7 +4154,7 @@
- puparium (drosophila)
+ puparium (D melanogaster)
@@ -4173,7 +4173,7 @@
- outer epithelium (drosophila)
+ outer epithelium (D melanogaster)
@@ -4192,7 +4192,7 @@
- insect imaginal precursor (drosophila)
+ insect imaginal precursor (D melanogaster)
@@ -4211,7 +4211,7 @@
- open tracheal system (drosophila)
+ open tracheal system (D melanogaster)
@@ -4230,7 +4230,7 @@
- insect tracheal pit (drosophila)
+ insect tracheal pit (D melanogaster)
@@ -4249,7 +4249,7 @@
- insect tracheal primordium (drosophila)
+ insect tracheal primordium (D melanogaster)
@@ -4268,7 +4268,7 @@
- insect trachea (drosophila)
+ insect trachea (D melanogaster)
@@ -4287,7 +4287,7 @@
- insect spiracle (drosophila)
+ insect spiracle (D melanogaster)
@@ -4306,7 +4306,7 @@
- digestive system (drosophila)
+ digestive system (D melanogaster)
@@ -4325,7 +4325,7 @@
- renal system (drosophila)
+ renal system (D melanogaster)
@@ -4344,7 +4344,7 @@
- open circulatory system (drosophila)
+ open circulatory system (D melanogaster)
@@ -4363,7 +4363,7 @@
- coelemic cavity lumen (drosophila)
+ coelemic cavity lumen (D melanogaster)
@@ -4382,7 +4382,7 @@
- hemolymph (drosophila)
+ hemolymph (D melanogaster)
@@ -4401,7 +4401,7 @@
- arthropod fat body (drosophila)
+ arthropod fat body (D melanogaster)
@@ -4420,7 +4420,7 @@
- endocrine system (drosophila)
+ endocrine system (D melanogaster)
@@ -4439,7 +4439,7 @@
- nervous system (drosophila)
+ nervous system (D melanogaster)
@@ -4458,7 +4458,7 @@
- central nervous system (drosophila)
+ central nervous system (D melanogaster)
@@ -4477,7 +4477,7 @@
- brain (drosophila)
+ brain (D melanogaster)
@@ -4496,7 +4496,7 @@
- insect stomatogastric nervous system (drosophila)
+ insect stomatogastric nervous system (D melanogaster)
@@ -4515,7 +4515,7 @@
- ventral nerve cord (drosophila)
+ ventral nerve cord (D melanogaster)
@@ -4534,7 +4534,7 @@
- peripheral nervous system (drosophila)
+ peripheral nervous system (D melanogaster)
@@ -4553,7 +4553,7 @@
- neuron projection bundle (drosophila)
+ neuron projection bundle (D melanogaster)
@@ -4572,7 +4572,7 @@
- axon tract (drosophila)
+ axon tract (D melanogaster)
@@ -4591,7 +4591,7 @@
- nerve (drosophila)
+ nerve (D melanogaster)
@@ -4610,7 +4610,7 @@
- sensory nerve (drosophila)
+ sensory nerve (D melanogaster)
@@ -4629,7 +4629,7 @@
- neuropil (drosophila)
+ neuropil (D melanogaster)
@@ -4648,7 +4648,7 @@
- sense organ (drosophila)
+ sense organ (D melanogaster)
@@ -4667,7 +4667,7 @@
- chemosensory organ (drosophila)
+ chemosensory organ (D melanogaster)
@@ -4686,7 +4686,7 @@
- olfactory organ (drosophila)
+ olfactory organ (D melanogaster)
@@ -4705,7 +4705,7 @@
- gustatory organ (drosophila)
+ gustatory organ (D melanogaster)
@@ -4724,7 +4724,7 @@
- eye (drosophila)
+ eye (D melanogaster)
@@ -4743,7 +4743,7 @@
- insect external sensory organ (drosophila)
+ insect external sensory organ (D melanogaster)
@@ -4762,7 +4762,7 @@
- insect chaeta (drosophila)
+ insect chaeta (D melanogaster)
@@ -4781,7 +4781,7 @@
- chordotonal organ (drosophila)
+ chordotonal organ (D melanogaster)
@@ -4800,7 +4800,7 @@
- gastrula (drosophila)
+ gastrula (D melanogaster)
@@ -4819,7 +4819,7 @@
- late embryo (drosophila)
+ late embryo (D melanogaster)
@@ -4838,7 +4838,7 @@
- second instar larva (drosophila)
+ second instar larva (D melanogaster)
@@ -4857,7 +4857,7 @@
- insect wing margin (drosophila)
+ insect wing margin (D melanogaster)
@@ -4876,7 +4876,7 @@
- foregut (drosophila)
+ foregut (D melanogaster)
@@ -4895,7 +4895,7 @@
- insect pharynx (drosophila)
+ insect pharynx (D melanogaster)
@@ -4914,7 +4914,7 @@
- saliva-secreting gland (drosophila)
+ saliva-secreting gland (D melanogaster)
@@ -4933,7 +4933,7 @@
- midgut (drosophila)
+ midgut (D melanogaster)
@@ -4952,7 +4952,7 @@
- hindgut (drosophila)
+ hindgut (D melanogaster)
@@ -4971,7 +4971,7 @@
- neural glomerulus (drosophila)
+ neural glomerulus (D melanogaster)
@@ -4990,7 +4990,7 @@
- insect embryonic/larval integumentary system (drosophila)
+ insect embryonic/larval integumentary system (D melanogaster)
@@ -5009,7 +5009,7 @@
- insect adult integumentary system (drosophila)
+ insect adult integumentary system (D melanogaster)
@@ -5028,7 +5028,7 @@
- anlage (drosophila)
+ anlage (D melanogaster)
@@ -5047,7 +5047,7 @@
- insect ectoderm anlage (drosophila)
+ insect ectoderm anlage (D melanogaster)
@@ -5066,7 +5066,7 @@
- insect circulatory system primordium (drosophila)
+ insect circulatory system primordium (D melanogaster)
@@ -5085,7 +5085,7 @@
- insect lymph gland primordium (drosophila)
+ insect lymph gland primordium (D melanogaster)
@@ -5104,7 +5104,7 @@
- primordium (drosophila)
+ primordium (D melanogaster)
@@ -5123,7 +5123,7 @@
- insect adult clypeo-labral primordium (drosophila)
+ insect adult clypeo-labral primordium (D melanogaster)
@@ -5142,7 +5142,7 @@
- insect dorsal epidermis primordium (drosophila)
+ insect dorsal epidermis primordium (D melanogaster)
@@ -5161,7 +5161,7 @@
- insect ventral epidermis primordium (drosophila)
+ insect ventral epidermis primordium (D melanogaster)
@@ -5180,7 +5180,7 @@
- insect clypeo-labral primordium (drosophila)
+ insect clypeo-labral primordium (D melanogaster)
@@ -5199,7 +5199,7 @@
- insect ventral ectoderm (drosophila)
+ insect ventral ectoderm (D melanogaster)
@@ -5218,7 +5218,7 @@
- insect presumptive embryonic/larval tracheal system (drosophila)
+ insect presumptive embryonic/larval tracheal system (D melanogaster)
@@ -5237,7 +5237,7 @@
- terminal part of digestive tract (drosophila)
+ terminal part of digestive tract (D melanogaster)
@@ -5256,7 +5256,7 @@
- arthropod neurohemal organ (drosophila)
+ arthropod neurohemal organ (D melanogaster)
@@ -5275,7 +5275,7 @@
- Malpighian tubule (drosophila)
+ Malpighian tubule (D melanogaster)
@@ -5294,7 +5294,7 @@
- corpus cardiacum (drosophila)
+ corpus cardiacum (D melanogaster)
@@ -5313,7 +5313,7 @@
- corpus allatum (drosophila)
+ corpus allatum (D melanogaster)
@@ -5332,7 +5332,7 @@
- mushroom body (drosophila)
+ mushroom body (D melanogaster)
@@ -5351,7 +5351,7 @@
- pars intercerebralis (drosophila)
+ pars intercerebralis (D melanogaster)
@@ -5370,7 +5370,7 @@
- insect Bolwig organ (drosophila)
+ insect Bolwig organ (D melanogaster)
@@ -5389,7 +5389,7 @@
- articulation (drosophila)
+ articulation (D melanogaster)
@@ -5408,7 +5408,7 @@
- insect Bolwig organ primordium (drosophila)
+ insect Bolwig organ primordium (D melanogaster)
@@ -5427,7 +5427,7 @@
- insect dorsal imaginal precursor (drosophila)
+ insect dorsal imaginal precursor (D melanogaster)
@@ -5446,7 +5446,7 @@
- extraembryonic structure (drosophila)
+ extraembryonic structure (D melanogaster)
@@ -5465,7 +5465,7 @@
- insect arista lateral (drosophila)
+ insect arista lateral (D melanogaster)
@@ -5484,7 +5484,7 @@
- insect pharate adult (drosophila)
+ insect pharate adult (D melanogaster)
@@ -5503,7 +5503,7 @@
- insect mesothoracic tergum primordium (drosophila)
+ insect mesothoracic tergum primordium (D melanogaster)
@@ -5522,7 +5522,7 @@
- appendage (drosophila)
+ appendage (D melanogaster)
@@ -5541,7 +5541,7 @@
- anatomical structure (drosophila)
+ anatomical structure (D melanogaster)
@@ -5560,7 +5560,7 @@
- tissue (drosophila)
+ tissue (D melanogaster)
@@ -5579,7 +5579,7 @@
- male organism (drosophila)
+ male organism (D melanogaster)
@@ -5598,7 +5598,7 @@
- epithelium (drosophila)
+ epithelium (D melanogaster)
@@ -5617,7 +5617,7 @@
- developing anatomical structure (drosophila)
+ developing anatomical structure (D melanogaster)
@@ -5636,7 +5636,7 @@
- organism subdivision (drosophila)
+ organism subdivision (D melanogaster)
@@ -5655,7 +5655,7 @@
- multi-tissue structure (drosophila)
+ multi-tissue structure (D melanogaster)
@@ -5674,7 +5674,7 @@
- female organism (drosophila)
+ female organism (D melanogaster)
@@ -5693,7 +5693,7 @@
- acellular anatomical structure (drosophila)
+ acellular anatomical structure (D melanogaster)
@@ -5712,7 +5712,7 @@
- immaterial anatomical entity (drosophila)
+ immaterial anatomical entity (D melanogaster)
@@ -5731,7 +5731,7 @@
- material anatomical entity (drosophila)
+ material anatomical entity (D melanogaster)
@@ -5750,7 +5750,7 @@
- anatomical space (drosophila)
+ anatomical space (D melanogaster)
@@ -5769,7 +5769,7 @@
- subdivision of organism along appendicular axis (drosophila)
+ subdivision of organism along appendicular axis (D melanogaster)
@@ -5788,7 +5788,7 @@
- organism substance (drosophila)
+ organism substance (D melanogaster)
@@ -5807,7 +5807,7 @@
- insect metatarsus of male prothoracic leg (drosophila)
+ insect metatarsus of male prothoracic leg (D melanogaster)
@@ -5826,7 +5826,7 @@
- simple columnar epithelium (drosophila)
+ simple columnar epithelium (D melanogaster)
@@ -5845,7 +5845,7 @@
- insect trunk ectoderm (drosophila)
+ insect trunk ectoderm (D melanogaster)
@@ -5864,7 +5864,7 @@
- multi cell part structure (drosophila)
+ multi cell part structure (D melanogaster)
@@ -5883,7 +5883,7 @@
- insect centro-posterior medial synaptic neuropil domain (drosophila)
+ insect centro-posterior medial synaptic neuropil domain (D melanogaster)
@@ -5902,7 +5902,7 @@
- insect presumptive embryonic/larval system (drosophila)
+ insect presumptive embryonic/larval system (D melanogaster)
@@ -5921,7 +5921,7 @@
- insect adult protocerebrum (drosophila)
+ insect adult protocerebrum (D melanogaster)
@@ -5940,7 +5940,7 @@
- segment of antenna (drosophila)
+ segment of antenna (D melanogaster)
@@ -5959,7 +5959,7 @@
- insect segment of leg (drosophila)
+ insect segment of leg (D melanogaster)
@@ -5978,7 +5978,7 @@
- arthropod sensillum (drosophila)
+ arthropod sensillum (D melanogaster)
@@ -5997,7 +5997,7 @@
- cell cluster organ (drosophila)
+ cell cluster organ (D melanogaster)
@@ -6016,7 +6016,7 @@
- compound cell cluster organ (drosophila)
+ compound cell cluster organ (D melanogaster)
@@ -6035,7 +6035,7 @@
- insect external sensillum (drosophila)
+ insect external sensillum (D melanogaster)
@@ -6054,7 +6054,7 @@
- insect eo-type sensillum (drosophila)
+ insect eo-type sensillum (D melanogaster)
@@ -6073,7 +6073,7 @@
- insect internal sensillum (drosophila)
+ insect internal sensillum (D melanogaster)
@@ -6092,7 +6092,7 @@
- insect embryonic/larval sensillum (drosophila)
+ insect embryonic/larval sensillum (D melanogaster)
@@ -6111,7 +6111,7 @@
- insect embryonic/larval head sensillum (drosophila)
+ insect embryonic/larval head sensillum (D melanogaster)
@@ -6130,7 +6130,7 @@
- insect cuticular specialization (drosophila)
+ insect cuticular specialization (D melanogaster)
@@ -6149,7 +6149,7 @@
- insect chorionic specialization (drosophila)
+ insect chorionic specialization (D melanogaster)
@@ -6168,7 +6168,7 @@
- disconnected anatomical group (drosophila)
+ disconnected anatomical group (D melanogaster)
@@ -6187,7 +6187,7 @@
- anatomical cluster (drosophila)
+ anatomical cluster (D melanogaster)
@@ -6206,7 +6206,7 @@
- non-connected functional system (drosophila)
+ non-connected functional system (D melanogaster)
@@ -6225,7 +6225,7 @@
- insect embryonic/larval head sense organ (drosophila)
+ insect embryonic/larval head sense organ (D melanogaster)
@@ -6244,7 +6244,7 @@
- insect region of integument (drosophila)
+ insect region of integument (D melanogaster)
@@ -6263,7 +6263,7 @@
- insect segmental subdivision of integument (drosophila)
+ insect segmental subdivision of integument (D melanogaster)
@@ -6282,7 +6282,7 @@
- insect integumentary specialisation (drosophila)
+ insect integumentary specialisation (D melanogaster)
@@ -6301,7 +6301,7 @@
- insect tagmatic subdivision of integument (drosophila)
+ insect tagmatic subdivision of integument (D melanogaster)
@@ -6320,7 +6320,7 @@
- organ system subdivision (drosophila)
+ organ system subdivision (D melanogaster)
@@ -6339,7 +6339,7 @@
- insect segmental subdivision of organ system (drosophila)
+ insect segmental subdivision of organ system (D melanogaster)
@@ -6358,7 +6358,7 @@
- insect internal sense organ (drosophila)
+ insect internal sense organ (D melanogaster)
@@ -6377,7 +6377,7 @@
- lumen of open tracheal system trachea (drosophila)
+ lumen of open tracheal system trachea (D melanogaster)
@@ -6396,7 +6396,7 @@
- insect epithelial furrow (drosophila)
+ insect epithelial furrow (D melanogaster)
@@ -6415,7 +6415,7 @@
- epithelial tube (drosophila)
+ epithelial tube (D melanogaster)
@@ -6434,7 +6434,7 @@
- sensory system (drosophila)
+ sensory system (D melanogaster)
@@ -6453,7 +6453,7 @@
- insect abdominal histoblast primordium (drosophila)
+ insect abdominal histoblast primordium (D melanogaster)
@@ -6472,7 +6472,7 @@
- insect non-connected developing system (drosophila)
+ insect non-connected developing system (D melanogaster)
@@ -6491,7 +6491,7 @@
- insect synaptic neuropil (drosophila)
+ insect synaptic neuropil (D melanogaster)
@@ -6510,7 +6510,7 @@
- insect synaptic neuropil domain (drosophila)
+ insect synaptic neuropil domain (D melanogaster)
@@ -6529,7 +6529,7 @@
- insect synaptic neuropil block (drosophila)
+ insect synaptic neuropil block (D melanogaster)
@@ -6548,7 +6548,7 @@
- anus (drosophila)
+ anus (D melanogaster)
@@ -6567,7 +6567,7 @@
- digestive tract epithelium (drosophila)
+ digestive tract epithelium (D melanogaster)
@@ -6586,7 +6586,7 @@
- circulatory system dorsal vessel (drosophila)
+ circulatory system dorsal vessel (D melanogaster)
@@ -6605,7 +6605,7 @@
- anatomical row (drosophila)
+ anatomical row (D melanogaster)
@@ -6624,7 +6624,7 @@
- insect sensilla row (drosophila)
+ insect sensilla row (D melanogaster)
@@ -6643,7 +6643,7 @@
- multicellular anatomical structure (drosophila)
+ multicellular anatomical structure (D melanogaster)
@@ -6662,7 +6662,7 @@
- duct (drosophila)
+ duct (D melanogaster)
@@ -6681,7 +6681,7 @@
- subdivision of digestive tract (drosophila)
+ subdivision of digestive tract (D melanogaster)
@@ -6700,7 +6700,7 @@
- digestive tract diverticulum (drosophila)
+ digestive tract diverticulum (D melanogaster)
@@ -6719,7 +6719,7 @@
- gland (drosophila)
+ gland (D melanogaster)
@@ -6738,7 +6738,7 @@
- insect adult cerebral ganglion (drosophila)
+ insect adult cerebral ganglion (D melanogaster)
@@ -6757,7 +6757,7 @@
- insect presumptive prothoracic metatarsus (drosophila)
+ insect presumptive prothoracic metatarsus (D melanogaster)
@@ -6776,7 +6776,7 @@
- insect presumptive arista (drosophila)
+ insect presumptive arista (D melanogaster)
@@ -6795,7 +6795,7 @@
- anatomical entity (drosophila)
+ anatomical entity (D melanogaster)
diff --git a/src/ontology/bridge/uberon-bridge-to-fbdv.owl b/src/ontology/bridge/uberon-bridge-to-fbdv.owl
index cd93c7653..b37d4d520 100644
--- a/src/ontology/bridge/uberon-bridge-to-fbdv.owl
+++ b/src/ontology/bridge/uberon-bridge-to-fbdv.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
@@ -72,7 +72,7 @@
- life cycle (drosophila)
+ life cycle (D melanogaster)
@@ -91,7 +91,7 @@
- cleavage stage (drosophila)
+ cleavage stage (D melanogaster)
@@ -110,7 +110,7 @@
- zygote stage (drosophila)
+ zygote stage (D melanogaster)
@@ -129,7 +129,7 @@
- embryo stage (drosophila)
+ embryo stage (D melanogaster)
@@ -148,7 +148,7 @@
- gastrula stage (drosophila)
+ gastrula stage (D melanogaster)
@@ -167,7 +167,7 @@
- late embryonic stage (drosophila)
+ late embryonic stage (D melanogaster)
@@ -186,7 +186,7 @@
- instar larval stage (drosophila)
+ instar larval stage (D melanogaster)
@@ -205,7 +205,7 @@
- pupal stage (drosophila)
+ pupal stage (D melanogaster)
@@ -224,7 +224,7 @@
- fully formed stage (drosophila)
+ fully formed stage (D melanogaster)
@@ -243,7 +243,7 @@
- life cycle stage (drosophila)
+ life cycle stage (D melanogaster)
diff --git a/src/ontology/bridge/uberon-bridge-to-fma.owl b/src/ontology/bridge/uberon-bridge-to-fma.owl
index 22d2d1d37..ade914131 100644
--- a/src/ontology/bridge/uberon-bridge-to-fma.owl
+++ b/src/ontology/bridge/uberon-bridge-to-fma.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Onard Mejino
Terry Hayamizu
Uberon editors
diff --git a/src/ontology/bridge/uberon-bridge-to-go.owl b/src/ontology/bridge/uberon-bridge-to-go.owl
index 004e311f7..9c90bdd7d 100644
--- a/src/ontology/bridge/uberon-bridge-to-go.owl
+++ b/src/ontology/bridge/uberon-bridge-to-go.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-hao.owl b/src/ontology/bridge/uberon-bridge-to-hao.owl
index 91a908247..ce2bfc166 100644
--- a/src/ontology/bridge/uberon-bridge-to-hao.owl
+++ b/src/ontology/bridge/uberon-bridge-to-hao.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-hba.owl b/src/ontology/bridge/uberon-bridge-to-hba.owl
index 42ffade9b..3abb79877 100644
--- a/src/ontology/bridge/uberon-bridge-to-hba.owl
+++ b/src/ontology/bridge/uberon-bridge-to-hba.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-hsapdv.owl b/src/ontology/bridge/uberon-bridge-to-hsapdv.owl
index 1e8b543bf..f45b2efc6 100644
--- a/src/ontology/bridge/uberon-bridge-to-hsapdv.owl
+++ b/src/ontology/bridge/uberon-bridge-to-hsapdv.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
@@ -96,13 +96,13 @@
-
+
-
+
-
+
@@ -110,7 +110,26 @@
- embryo stage (human)
+ zygote stage (human)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ cleavage stage (human)
@@ -191,13 +210,13 @@
-
+
-
+
-
+
@@ -205,14 +224,52 @@
- neonate stage (human)
+ late embryonic stage (human)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (human)
-
+
-
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (human)
+
+
+
+
+
+
+
@@ -229,12 +286,151 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (human)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (human)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ infant stage (human)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neonate stage (human)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (human)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (human)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (human)
+
+
+
+
+
+
+
+
+
+
@@ -253,6 +449,18 @@
+
+
+
+
+
+
+
+
+
+
+
+
@@ -277,6 +485,24 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
@@ -286,6 +512,30 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/src/ontology/bridge/uberon-bridge-to-kupo.owl b/src/ontology/bridge/uberon-bridge-to-kupo.owl
index 25911d850..fc3543e56 100644
--- a/src/ontology/bridge/uberon-bridge-to-kupo.owl
+++ b/src/ontology/bridge/uberon-bridge-to-kupo.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-ma.owl b/src/ontology/bridge/uberon-bridge-to-ma.owl
index d313c5d90..ce94e36c9 100644
--- a/src/ontology/bridge/uberon-bridge-to-ma.owl
+++ b/src/ontology/bridge/uberon-bridge-to-ma.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
George Gkoutos
Terry Hayamizu
Uberon editors
diff --git a/src/ontology/bridge/uberon-bridge-to-mmusdv.owl b/src/ontology/bridge/uberon-bridge-to-mmusdv.owl
index 5b48644f7..3c0a51f8c 100644
--- a/src/ontology/bridge/uberon-bridge-to-mmusdv.owl
+++ b/src/ontology/bridge/uberon-bridge-to-mmusdv.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
@@ -96,13 +96,13 @@
-
+
-
+
-
+
@@ -110,7 +110,7 @@
- embryo stage (mouse)
+ zygote stage (mouse)
@@ -229,6 +229,44 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neonate stage (mouse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (mouse)
+
+
+
+
@@ -248,13 +286,13 @@
-
+
-
+
-
+
@@ -262,7 +300,7 @@
- neonate stage (mouse)
+ fully formed stage (mouse)
@@ -286,12 +324,113 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (mouse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (mouse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (mouse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ infant stage (mouse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (mouse)
+
+
+
+
+
+
+
+
+
+
@@ -310,6 +449,12 @@
+
+
+
+
+
+
@@ -361,6 +506,36 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/src/ontology/bridge/uberon-bridge-to-ncit.owl b/src/ontology/bridge/uberon-bridge-to-ncit.owl
index 6cb165beb..8d64a80ad 100644
--- a/src/ontology/bridge/uberon-bridge-to-ncit.owl
+++ b/src/ontology/bridge/uberon-bridge-to-ncit.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-oges.owl b/src/ontology/bridge/uberon-bridge-to-oges.owl
index 41c248b83..bceab0eea 100644
--- a/src/ontology/bridge/uberon-bridge-to-oges.owl
+++ b/src/ontology/bridge/uberon-bridge-to-oges.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-pba.owl b/src/ontology/bridge/uberon-bridge-to-pba.owl
index 8e0032792..ca13f0702 100644
--- a/src/ontology/bridge/uberon-bridge-to-pba.owl
+++ b/src/ontology/bridge/uberon-bridge-to-pba.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
@@ -636,7 +636,7 @@
- Brodmann (1909) area 17 (primates)
+ Brodmann (1909) area 17 (primate)
@@ -655,7 +655,7 @@
- Brodmann (1909) area 18 (primates)
+ Brodmann (1909) area 18 (primate)
@@ -674,7 +674,7 @@
- subiculum (primates)
+ subiculum (primate)
@@ -693,7 +693,7 @@
- CA1 field of hippocampus (primates)
+ CA1 field of hippocampus (primate)
@@ -712,7 +712,7 @@
- CA1 stratum oriens (primates)
+ CA1 stratum oriens (primate)
@@ -731,7 +731,7 @@
- pyramidal layer of CA1 (primates)
+ pyramidal layer of CA1 (primate)
@@ -750,7 +750,7 @@
- CA1 stratum radiatum (primates)
+ CA1 stratum radiatum (primate)
@@ -769,7 +769,7 @@
- CA1 stratum lacunosum moleculare (primates)
+ CA1 stratum lacunosum moleculare (primate)
@@ -788,7 +788,7 @@
- CA2 field of hippocampus (primates)
+ CA2 field of hippocampus (primate)
@@ -807,7 +807,7 @@
- CA2 stratum oriens (primates)
+ CA2 stratum oriens (primate)
@@ -826,7 +826,7 @@
- pyramidal layer of CA2 (primates)
+ pyramidal layer of CA2 (primate)
@@ -845,7 +845,7 @@
- CA2 stratum radiatum (primates)
+ CA2 stratum radiatum (primate)
@@ -864,7 +864,7 @@
- CA2 stratum lacunosum moleculare (primates)
+ CA2 stratum lacunosum moleculare (primate)
@@ -883,7 +883,7 @@
- CA3 field of hippocampus (primates)
+ CA3 field of hippocampus (primate)
@@ -902,7 +902,7 @@
- CA3 stratum oriens (primates)
+ CA3 stratum oriens (primate)
@@ -921,7 +921,7 @@
- pyramidal layer of CA3 (primates)
+ pyramidal layer of CA3 (primate)
@@ -940,7 +940,7 @@
- CA3 stratum lucidum (primates)
+ CA3 stratum lucidum (primate)
@@ -959,7 +959,7 @@
- CA3 stratum radiatum (primates)
+ CA3 stratum radiatum (primate)
@@ -978,7 +978,7 @@
- CA3 stratum lacunosum moleculare (primates)
+ CA3 stratum lacunosum moleculare (primate)
@@ -997,7 +997,7 @@
- CA4 field of hippocampus (primates)
+ CA4 field of hippocampus (primate)
@@ -1016,7 +1016,7 @@
- striatum (primates)
+ striatum (primate)
@@ -1035,7 +1035,7 @@
- dorsal striatum (primates)
+ dorsal striatum (primate)
@@ -1054,7 +1054,7 @@
- caudate nucleus (primates)
+ caudate nucleus (primate)
@@ -1073,7 +1073,7 @@
- putamen (primates)
+ putamen (primate)
@@ -1092,7 +1092,7 @@
- ventral striatum (primates)
+ ventral striatum (primate)
@@ -1111,7 +1111,7 @@
- nucleus accumbens (primates)
+ nucleus accumbens (primate)
@@ -1130,7 +1130,7 @@
- core of nucleus accumbens (primates)
+ core of nucleus accumbens (primate)
@@ -1149,7 +1149,7 @@
- shell of nucleus accumbens (primates)
+ shell of nucleus accumbens (primate)
@@ -1168,7 +1168,7 @@
- island of Calleja (primates)
+ island of Calleja (primate)
@@ -1187,7 +1187,7 @@
- olfactory tubercle (primates)
+ olfactory tubercle (primate)
@@ -1206,7 +1206,7 @@
- globus pallidus (primates)
+ globus pallidus (primate)
@@ -1225,7 +1225,7 @@
- medial globus pallidus (primates)
+ medial globus pallidus (primate)
@@ -1244,7 +1244,7 @@
- lateral globus pallidus (primates)
+ lateral globus pallidus (primate)
@@ -1263,7 +1263,7 @@
- internal capsule of telencephalon (primates)
+ internal capsule of telencephalon (primate)
@@ -1282,7 +1282,7 @@
- anterior amygdaloid area (primates)
+ anterior amygdaloid area (primate)
@@ -1301,7 +1301,7 @@
- lateral amygdaloid nucleus (primates)
+ lateral amygdaloid nucleus (primate)
@@ -1320,7 +1320,7 @@
- central amygdaloid nucleus (primates)
+ central amygdaloid nucleus (primate)
@@ -1339,7 +1339,7 @@
- medial vestibular nucleus (primates)
+ medial vestibular nucleus (primate)
@@ -1358,7 +1358,7 @@
- intercalated amygdaloid nuclei (primates)
+ intercalated amygdaloid nuclei (primate)
@@ -1377,7 +1377,7 @@
- amygdalohippocampal area (primates)
+ amygdalohippocampal area (primate)
@@ -1396,7 +1396,7 @@
- amygdalohippocampal area, magnocellular division (primates)
+ amygdalohippocampal area, magnocellular division (primate)
@@ -1415,7 +1415,7 @@
- amygdalohippocampal area, parvocellular division (primates)
+ amygdalohippocampal area, parvocellular division (primate)
@@ -1434,7 +1434,7 @@
- amygdalopiriform transition area (primates)
+ amygdalopiriform transition area (primate)
@@ -1453,7 +1453,7 @@
- basal nucleus of telencephalon (primates)
+ basal nucleus of telencephalon (primate)
@@ -1472,7 +1472,7 @@
- telencephalon (primates)
+ telencephalon (primate)
@@ -1491,7 +1491,7 @@
- cerebral cortex (primates)
+ cerebral cortex (primate)
@@ -1510,7 +1510,7 @@
- lateral entorhinal cortex (primates)
+ lateral entorhinal cortex (primate)
@@ -1529,7 +1529,7 @@
- medial entorhinal cortex (primates)
+ medial entorhinal cortex (primate)
@@ -1548,7 +1548,7 @@
- perirhinal cortex (primates)
+ perirhinal cortex (primate)
@@ -1567,7 +1567,7 @@
- Ammon's horn (primates)
+ Ammon's horn (primate)
@@ -1586,7 +1586,7 @@
- subiculum (primates)
+ subiculum (primate)
@@ -1605,7 +1605,7 @@
- rostral migratory stream (primates)
+ rostral migratory stream (primate)
@@ -1624,7 +1624,7 @@
- cerebral nuclei (primates)
+ cerebral nuclei (primate)
@@ -1643,7 +1643,7 @@
- central medial nucleus (primates)
+ central medial nucleus (primate)
@@ -1662,7 +1662,7 @@
- basolateral amygdaloid nuclear complex (primates)
+ basolateral amygdaloid nuclear complex (primate)
@@ -1681,7 +1681,7 @@
- ganglionic eminence (primates)
+ ganglionic eminence (primate)
@@ -1700,7 +1700,7 @@
- lateral ganglionic eminence (primates)
+ lateral ganglionic eminence (primate)
@@ -1719,7 +1719,7 @@
- medial ganglionic eminence (primates)
+ medial ganglionic eminence (primate)
@@ -1738,7 +1738,7 @@
- caudal ganglionic eminence (primates)
+ caudal ganglionic eminence (primate)
@@ -1757,7 +1757,7 @@
- claustrum of brain (primates)
+ claustrum of brain (primate)
@@ -1776,7 +1776,7 @@
- basal forebrain (primates)
+ basal forebrain (primate)
@@ -1795,7 +1795,7 @@
- diencephalon (primates)
+ diencephalon (primate)
@@ -1814,7 +1814,7 @@
- dorsal plus ventral thalamus (primates)
+ dorsal plus ventral thalamus (primate)
@@ -1833,7 +1833,7 @@
- dorsal thalamus (primates)
+ dorsal thalamus (primate)
@@ -1852,7 +1852,7 @@
- lateral geniculate body (primates)
+ lateral geniculate body (primate)
@@ -1871,7 +1871,7 @@
- dorsal lateral geniculate nucleus (primates)
+ dorsal lateral geniculate nucleus (primate)
@@ -1890,7 +1890,7 @@
- magnocellular layer of dorsal nucleus of lateral geniculate body (primates)
+ magnocellular layer of dorsal nucleus of lateral geniculate body (primate)
@@ -1909,7 +1909,7 @@
- parvocellular layer of dorsal nucleus of lateral geniculate body (primates)
+ parvocellular layer of dorsal nucleus of lateral geniculate body (primate)
@@ -1928,7 +1928,7 @@
- epithalamus (primates)
+ epithalamus (primate)
@@ -1947,7 +1947,7 @@
- dorsolateral prefrontal cortex layer 2 (primates)
+ dorsolateral prefrontal cortex layer 2 (primate)
@@ -1966,7 +1966,7 @@
- dorsolateral prefrontal cortex layer 3 (primates)
+ dorsolateral prefrontal cortex layer 3 (primate)
@@ -1985,7 +1985,7 @@
- dorsolateral prefrontal cortex layer 4 (primates)
+ dorsolateral prefrontal cortex layer 4 (primate)
@@ -2004,7 +2004,7 @@
- dorsolateral prefrontal cortex layer 5 (primates)
+ dorsolateral prefrontal cortex layer 5 (primate)
@@ -2023,7 +2023,7 @@
- dorsolateral prefrontal cortex layer 6 (primates)
+ dorsolateral prefrontal cortex layer 6 (primate)
@@ -2042,7 +2042,7 @@
- neocortex (primates)
+ neocortex (primate)
@@ -2061,7 +2061,7 @@
- cerebral cortex marginal layer (primates)
+ cerebral cortex marginal layer (primate)
@@ -2080,7 +2080,7 @@
- cortical layer I (primates)
+ cortical layer I (primate)
@@ -2099,7 +2099,7 @@
- cortical layer II (primates)
+ cortical layer II (primate)
@@ -2118,7 +2118,7 @@
- cortical layer III (primates)
+ cortical layer III (primate)
@@ -2137,7 +2137,7 @@
- cortical layer IV (primates)
+ cortical layer IV (primate)
@@ -2156,7 +2156,7 @@
- cortical layer V (primates)
+ cortical layer V (primate)
@@ -2175,7 +2175,7 @@
- cortical layer VI (primates)
+ cortical layer VI (primate)
@@ -2194,7 +2194,7 @@
- cortical plate (primates)
+ cortical plate (primate)
@@ -2213,7 +2213,7 @@
- cortical subplate (primates)
+ cortical subplate (primate)
@@ -2232,7 +2232,7 @@
- cerebellum intermediate zone (primates)
+ cerebellum intermediate zone (primate)
@@ -2251,7 +2251,7 @@
- postnatal subventricular zone (primates)
+ postnatal subventricular zone (primate)
@@ -2270,7 +2270,7 @@
- ventricular zone (primates)
+ ventricular zone (primate)
@@ -2289,7 +2289,7 @@
- white matter (primates)
+ white matter (primate)
@@ -2308,7 +2308,7 @@
- entorhinal cortex (primates)
+ entorhinal cortex (primate)
@@ -2327,7 +2327,7 @@
- brain (primates)
+ brain (primate)
@@ -2346,7 +2346,7 @@
- collection of basal ganglia (primates)
+ collection of basal ganglia (primate)
@@ -2365,7 +2365,7 @@
- amygdala (primates)
+ amygdala (primate)
@@ -2384,7 +2384,7 @@
- hippocampal formation (primates)
+ hippocampal formation (primate)
@@ -2403,7 +2403,7 @@
- occipital cortex (primates)
+ occipital cortex (primate)
diff --git a/src/ontology/bridge/uberon-bridge-to-sctid.owl b/src/ontology/bridge/uberon-bridge-to-sctid.owl
index 24f3480c9..86aa369c9 100644
--- a/src/ontology/bridge/uberon-bridge-to-sctid.owl
+++ b/src/ontology/bridge/uberon-bridge-to-sctid.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
OBOL
Uberon editors
Rough subclass axioms between SNOMED-CT and Uberon. Note that SNOMED is not open, unlike other ontologies used in bridges here. Consequently, the mappings here are not verified to the same degree.
diff --git a/src/ontology/bridge/uberon-bridge-to-spd.owl b/src/ontology/bridge/uberon-bridge-to-spd.owl
index 7bd21656b..c3ebf2b4e 100644
--- a/src/ontology/bridge/uberon-bridge-to-spd.owl
+++ b/src/ontology/bridge/uberon-bridge-to-spd.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-sslso.owl b/src/ontology/bridge/uberon-bridge-to-sslso.owl
new file mode 100644
index 000000000..66192f0f7
--- /dev/null
+++ b/src/ontology/bridge/uberon-bridge-to-sslso.owl
@@ -0,0 +1,4323 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (anolis)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (anolis)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (anolis)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (anolis)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (anolis)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (anolis)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (anolis)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (cow)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (cow)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (cow)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (cow)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (cow)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (cow)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (cow)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (cow)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (dog)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (dog)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (dog)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (dog)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (dog)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (dog)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (dog)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (dog)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (cavy)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (cavy)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (cavy)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (cavy)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (cavy)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (cavy)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (cavy)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (D pseudobscura)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (D pseudobscura)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (D pseudobscura)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ larval stage (D pseudobscura)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ pupal stage (D pseudobscura)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (D pseudobscura)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (D simulans)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (D simulans)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (D simulans)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ larval stage (D simulans)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ pupal stage (D simulans)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (D simulans)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (horse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (horse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (horse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (horse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (horse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (horse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (horse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (horse)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (cat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (cat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (cat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (cat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (cat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (cat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (cat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (cat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ cleavage stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ blastula stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ gastrula stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neurula stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ organogenesis stage (chicken)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (gorilla)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neonate stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ infant stage (opossum)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neonate stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ infant stage (macaque)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (platypus)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (platypus)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (platypus)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (platypus)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (platypus)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (platypus)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (platypus)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (platypus)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ zygote stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ cleavage stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ blastula stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ gastrula stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neurula stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ organogenesis stage (sheep)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (rabbit)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (rabbit)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (rabbit)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (rabbit)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (rabbit)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (rabbit)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (rabbit)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (bonobo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (chimpanzee)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ gastrula stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neurula stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late embryonic stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neonate stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ zygote stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ cleavage stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ blastula stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ organogenesis stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ infant stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (rat)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ zygote stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ cleavage stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 2 cell stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 4 cell stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 8 cell stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ blastula stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ gastrula stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ organogenesis stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-embryonic stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ larval stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (salmon)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ life cycle (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ embryo stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ sexually immature stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ nursing stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ juvenile stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ post-juvenile adult stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ prime adult stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late adult stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neonate stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ late embryonic stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ fully formed stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ infant stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ organogenesis stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ zygote stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ cleavage stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ blastula stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ gastrula stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ neurula stage (pig)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/src/ontology/bridge/uberon-bridge-to-tads.owl b/src/ontology/bridge/uberon-bridge-to-tads.owl
index f5c73e1c0..1ef771be0 100644
--- a/src/ontology/bridge/uberon-bridge-to-tads.owl
+++ b/src/ontology/bridge/uberon-bridge-to-tads.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-tgma.owl b/src/ontology/bridge/uberon-bridge-to-tgma.owl
index b3d9ec531..48db11d98 100644
--- a/src/ontology/bridge/uberon-bridge-to-tgma.owl
+++ b/src/ontology/bridge/uberon-bridge-to-tgma.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-wbbt.owl b/src/ontology/bridge/uberon-bridge-to-wbbt.owl
index 1b98cf9dd..d9233f4e3 100644
--- a/src/ontology/bridge/uberon-bridge-to-wbbt.owl
+++ b/src/ontology/bridge/uberon-bridge-to-wbbt.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-wbls.owl b/src/ontology/bridge/uberon-bridge-to-wbls.owl
index 932a3b63d..47ee10f27 100644
--- a/src/ontology/bridge/uberon-bridge-to-wbls.owl
+++ b/src/ontology/bridge/uberon-bridge-to-wbls.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/bridge/uberon-bridge-to-xao.owl b/src/ontology/bridge/uberon-bridge-to-xao.owl
index dfe713341..8f60f5380 100644
--- a/src/ontology/bridge/uberon-bridge-to-xao.owl
+++ b/src/ontology/bridge/uberon-bridge-to-xao.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Erik Segerdell
VG Ponferrada
Uberon editors
diff --git a/src/ontology/bridge/uberon-bridge-to-zfa.owl b/src/ontology/bridge/uberon-bridge-to-zfa.owl
index 9312c251f..c105d2aa9 100644
--- a/src/ontology/bridge/uberon-bridge-to-zfa.owl
+++ b/src/ontology/bridge/uberon-bridge-to-zfa.owl
@@ -9,7 +9,7 @@
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/">
-
+
Melissa Haendel
Veri Van Slyke
Yvonne Bradford
diff --git a/src/ontology/bridge/uberon-bridge-to-zfs.owl b/src/ontology/bridge/uberon-bridge-to-zfs.owl
index 8001ff293..9dc5bfa64 100644
--- a/src/ontology/bridge/uberon-bridge-to-zfs.owl
+++ b/src/ontology/bridge/uberon-bridge-to-zfs.owl
@@ -8,7 +8,7 @@
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
-
+
diff --git a/src/ontology/components/hra_depiction_3d_images.owl b/src/ontology/components/hra_depiction_3d_images.owl
index d8b01c0c6..98477b52e 100644
--- a/src/ontology/components/hra_depiction_3d_images.owl
+++ b/src/ontology/components/hra_depiction_3d_images.owl
@@ -400,8 +400,8 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/placenta-full-term-female/v1.1/assets/3d-vh-f-placenta-full-term.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb
@@ -476,6 +476,12 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-female/v1.2/assets/3d-vh-f-small-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-male/v1.2/assets/3d-vh-m-small-intestine.glb
+
+ https://cdn.humanatlas.io/digital-objects/ref-organ/ovary-female-right/v1.3/assets/3d-vh-f-ovary-r.glb
+
+
+ https://cdn.humanatlas.io/digital-objects/ref-organ/ovary-female-left/v1.3/assets/3d-vh-f-ovary-l.glb
+
https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.3/assets/3d-vh-f-heart.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.3/assets/3d-vh-m-heart.glb
@@ -543,8 +549,8 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/kidney-male-right/v1.3/assets/3d-vh-m-kidney-r.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb
@@ -604,8 +610,8 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.3/assets/3d-vh-m-heart.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb
@@ -765,8 +771,8 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/urinary-bladder-male/v1.2/assets/3d-vh-m-urinary-bladder.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb
@@ -1034,16 +1040,16 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.3/assets/3d-vh-m-pancreas.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/eye-female-left/v1.3/assets/3d-vh-f-eye-l.glb
@@ -1052,8 +1058,8 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/eye-male-right/v1.3/assets/3d-vh-m-eye-r.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb
- https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb
+ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb
diff --git a/src/ontology/diffs/uberon-diff.md b/src/ontology/diffs/uberon-diff.md
index 5f22c1b67..0540e2e32 100644
--- a/src/ontology/diffs/uberon-diff.md
+++ b/src/ontology/diffs/uberon-diff.md
@@ -2,1029 +2,4169 @@
## Left
- Ontology IRI: `http://purl.obolibrary.org/obo/uberon/uberon-base.owl`
-- Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2024-09-03/uberon-base.owl`
+- Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2024-11-25/uberon-base.owl`
- Loaded from: `file:/nfs/production/parkinso/spot/ontology-releases/uberon/src/ontology/diffs/uberon-lastbuild.owl`
-## Right
-- Ontology IRI: `http://purl.obolibrary.org/obo/uberon/uberon-base.owl`
-- Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2024-11-25/uberon-base.owl`
-- Loaded from: `file:/nfs/production/parkinso/spot/ontology-releases/uberon/src/ontology/diffs/../../../uberon-base.owl`
+## Right
+- Ontology IRI: `http://purl.obolibrary.org/obo/uberon/uberon-base.owl`
+- Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2025-01-15/uberon-base.owl`
+- Loaded from: `file:/nfs/production/parkinso/spot/ontology-releases/uberon/src/ontology/diffs/../../../uberon-base.owl`
+
+### Ontology imports
+
+
+
+### Ontology annotations
+#### Removed
+- [treat-xrefs-as-reverse-genus-differentia](http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-reverse-genus-differentia) "HsapDv part_of NCBITaxon:9606"
+
+- [treat-xrefs-as-reverse-genus-differentia](http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-reverse-genus-differentia) "MmusDv part_of NCBITaxon:10090"
+
+- [treat-xrefs-as-reverse-genus-differentia](http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-reverse-genus-differentia) "OlatDv part_of NCBITaxon:8089"
+
+- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2024-11-25"
+
+#### Added
+- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2025-01-15"
+
+
+### 2 cell stage `http://purl.obolibrary.org/obo/UBERON_0007232`
+
+#### Added
+- [2 cell stage](http://purl.obolibrary.org/obo/UBERON_0007232) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### 4 cell stage `http://purl.obolibrary.org/obo/UBERON_0007233`
+
+#### Added
+- [4 cell stage](http://purl.obolibrary.org/obo/UBERON_0007233) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### 8 cell stage `http://purl.obolibrary.org/obo/UBERON_0007236`
+
+#### Added
+- [8 cell stage](http://purl.obolibrary.org/obo/UBERON_0007236) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### CL_0000555 `http://purl.obolibrary.org/obo/CL_0000555`
+#### Removed
+- Class: [CL_0000555](http://purl.obolibrary.org/obo/CL_0000555)
+
+
+
+### CL_4023161 `http://purl.obolibrary.org/obo/CL_4023161`
+
+#### Added
+- Class: [CL_4023161](http://purl.obolibrary.org/obo/CL_4023161)
+
+
+### GCIs
+#### Removed
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male organism](http://purl.obolibrary.org/obo/UBERON_0003101)) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [prostate gland](http://purl.obolibrary.org/obo/UBERON_0002367)
+
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male organism](http://purl.obolibrary.org/obo/UBERON_0003101)) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0000998)
+
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male organism](http://purl.obolibrary.org/obo/UBERON_0003101)) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [vas deferens](http://purl.obolibrary.org/obo/UBERON_0001000)
+
+#### Added
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male organism](http://purl.obolibrary.org/obo/UBERON_0003101)) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [prostate gland](http://purl.obolibrary.org/obo/UBERON_0002367)
+
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male organism](http://purl.obolibrary.org/obo/UBERON_0003101)) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [vas deferens](http://purl.obolibrary.org/obo/UBERON_0001000)
+
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male organism](http://purl.obolibrary.org/obo/UBERON_0003101)) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0000998)
+
+
+### NCBITaxon_6692 `http://purl.obolibrary.org/obo/NCBITaxon_6692`
+
+#### Added
+- Class: [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+
+### RO_0002178 `http://purl.obolibrary.org/obo/RO_0002178`
+#### Removed
+- ObjectProperty: [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178)
+
+
+
+### RO_0002179 `http://purl.obolibrary.org/obo/RO_0002179`
+#### Removed
+- ObjectProperty: [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179)
+
+
+
+### afferent lymphatic vessel `http://purl.obolibrary.org/obo/UBERON_0010396`
+#### Removed
+- [afferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010396) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [afferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010396) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+#### Added
+- [afferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010396) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [afferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010396) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### afferent portion of pharyngeal arch artery `http://purl.obolibrary.org/obo/UBERON_2000716`
+#### Removed
+- [afferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000716) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pharyngeal arch derived gill](http://purl.obolibrary.org/obo/UBERON_0011150)) and ([RO_0002380](http://purl.obolibrary.org/obo/RO_0002380) some [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363))
+
+- [afferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000716) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pharyngeal arch derived gill](http://purl.obolibrary.org/obo/UBERON_0011150)
+
+#### Added
+- [afferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000716) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002380](http://purl.obolibrary.org/obo/RO_0002380) some [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pharyngeal arch derived gill](http://purl.obolibrary.org/obo/UBERON_0011150))
+
+- [afferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000716) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pharyngeal arch derived gill](http://purl.obolibrary.org/obo/UBERON_0011150)
+
+
+### afferent spiracular artery `http://purl.obolibrary.org/obo/UBERON_0017616`
+#### Removed
+- [afferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017616) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [spiracle (sensu Vertebrata)](http://purl.obolibrary.org/obo/UBERON_0010019)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [pharyngeal arch artery 1](http://purl.obolibrary.org/obo/UBERON_0003118))
+
+- [afferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017616) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [spiracle (sensu Vertebrata)](http://purl.obolibrary.org/obo/UBERON_0010019)
+
+#### Added
+- [afferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017616) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [pharyngeal arch artery 1](http://purl.obolibrary.org/obo/UBERON_0003118)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [spiracle (sensu Vertebrata)](http://purl.obolibrary.org/obo/UBERON_0010019))
+
+- [afferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017616) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [spiracle (sensu Vertebrata)](http://purl.obolibrary.org/obo/UBERON_0010019)
+
+
+### anterior vena cava `http://purl.obolibrary.org/obo/UBERON_0001585`
+#### Removed
+- [anterior vena cava](http://purl.obolibrary.org/obo/UBERON_0001585) EquivalentTo [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [anterior region of body](http://purl.obolibrary.org/obo/UBERON_0000153))
+
+- [anterior vena cava](http://purl.obolibrary.org/obo/UBERON_0001585) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [anterior region of body](http://purl.obolibrary.org/obo/UBERON_0000153)
+
+#### Added
+- [anterior vena cava](http://purl.obolibrary.org/obo/UBERON_0001585) EquivalentTo [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [anterior region of body](http://purl.obolibrary.org/obo/UBERON_0000153))
+
+- [anterior vena cava](http://purl.obolibrary.org/obo/UBERON_0001585) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [anterior region of body](http://purl.obolibrary.org/obo/UBERON_0000153)
+
+
+### appendicular artery `http://purl.obolibrary.org/obo/UBERON_0039215`
+#### Removed
+- [appendicular artery](http://purl.obolibrary.org/obo/UBERON_0039215) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA"
+
+#### Added
+- [appendicular artery](http://purl.obolibrary.org/obo/UBERON_0039215) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA"
+
+
+### arrector muscle of hair `http://purl.obolibrary.org/obo/UBERON_0002033`
+#### Removed
+- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [arrector muscle of hair](http://purl.obolibrary.org/obo/UBERON_0002033) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+
+### artery of lip `http://purl.obolibrary.org/obo/UBERON_0009657`
+#### Removed
+- [artery of lip](http://purl.obolibrary.org/obo/UBERON_0009657) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lip](http://purl.obolibrary.org/obo/UBERON_0001833))
+
+- [artery of lip](http://purl.obolibrary.org/obo/UBERON_0009657) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lip](http://purl.obolibrary.org/obo/UBERON_0001833)
+
+#### Added
+- [artery of lip](http://purl.obolibrary.org/obo/UBERON_0009657) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lip](http://purl.obolibrary.org/obo/UBERON_0001833))
+
+- [artery of lip](http://purl.obolibrary.org/obo/UBERON_0009657) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lip](http://purl.obolibrary.org/obo/UBERON_0001833)
+
+
+### artery of lower lip `http://purl.obolibrary.org/obo/UBERON_0003471`
+#### Removed
+- [artery of lower lip](http://purl.obolibrary.org/obo/UBERON_0003471) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835))
+
+- [artery of lower lip](http://purl.obolibrary.org/obo/UBERON_0003471) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835)
+
+#### Added
+- [artery of lower lip](http://purl.obolibrary.org/obo/UBERON_0003471) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835))
+
+- [artery of lower lip](http://purl.obolibrary.org/obo/UBERON_0003471) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835)
+
+
+### artery of upper lip `http://purl.obolibrary.org/obo/UBERON_0003470`
+#### Removed
+- [artery of upper lip](http://purl.obolibrary.org/obo/UBERON_0003470) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834))
+
+- [artery of upper lip](http://purl.obolibrary.org/obo/UBERON_0003470) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834)
+
+#### Added
+- [artery of upper lip](http://purl.obolibrary.org/obo/UBERON_0003470) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834))
+
+- [artery of upper lip](http://purl.obolibrary.org/obo/UBERON_0003470) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834)
+
+
+### auricular artery `http://purl.obolibrary.org/obo/UBERON_0009655`
+#### Removed
+- [auricular artery](http://purl.obolibrary.org/obo/UBERON_0009655) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [external ear](http://purl.obolibrary.org/obo/UBERON_0001691))
+
+- [auricular artery](http://purl.obolibrary.org/obo/UBERON_0009655) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [external ear](http://purl.obolibrary.org/obo/UBERON_0001691)
+
+#### Added
+- [auricular artery](http://purl.obolibrary.org/obo/UBERON_0009655) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [external ear](http://purl.obolibrary.org/obo/UBERON_0001691))
+
+- [auricular artery](http://purl.obolibrary.org/obo/UBERON_0009655) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [external ear](http://purl.obolibrary.org/obo/UBERON_0001691)
+
+
+### auricular vein `http://purl.obolibrary.org/obo/UBERON_0006197`
+#### Removed
+- [auricular vein](http://purl.obolibrary.org/obo/UBERON_0006197) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [external ear](http://purl.obolibrary.org/obo/UBERON_0001691)
+
+#### Added
+- [auricular vein](http://purl.obolibrary.org/obo/UBERON_0006197) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [external ear](http://purl.obolibrary.org/obo/UBERON_0001691)
+
+
+### axillary artery `http://purl.obolibrary.org/obo/UBERON_0001394`
+#### Removed
+- [axillary artery](http://purl.obolibrary.org/obo/UBERON_0001394) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [axilla](http://purl.obolibrary.org/obo/UBERON_0009472))
+
+- [axillary artery](http://purl.obolibrary.org/obo/UBERON_0001394) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [axilla](http://purl.obolibrary.org/obo/UBERON_0009472)
+
+#### Added
+- [axillary artery](http://purl.obolibrary.org/obo/UBERON_0001394) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [axilla](http://purl.obolibrary.org/obo/UBERON_0009472))
+
+- [axillary artery](http://purl.obolibrary.org/obo/UBERON_0001394) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [axilla](http://purl.obolibrary.org/obo/UBERON_0009472)
+
+
+### axillary vein `http://purl.obolibrary.org/obo/UBERON_0000985`
+#### Removed
+- [axillary vein](http://purl.obolibrary.org/obo/UBERON_0000985) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [axilla](http://purl.obolibrary.org/obo/UBERON_0009472))
+
+- [axillary vein](http://purl.obolibrary.org/obo/UBERON_0000985) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [axilla](http://purl.obolibrary.org/obo/UBERON_0009472)
+
+#### Added
+- [axillary vein](http://purl.obolibrary.org/obo/UBERON_0000985) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [axilla](http://purl.obolibrary.org/obo/UBERON_0009472))
+
+- [axillary vein](http://purl.obolibrary.org/obo/UBERON_0000985) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [axilla](http://purl.obolibrary.org/obo/UBERON_0009472)
+
+
+### basilar artery `http://purl.obolibrary.org/obo/UBERON_0001633`
+#### Removed
+- [basilar artery](http://purl.obolibrary.org/obo/UBERON_0001633) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [hindbrain](http://purl.obolibrary.org/obo/UBERON_0002028)
+
+#### Added
+- [basilar artery](http://purl.obolibrary.org/obo/UBERON_0001633) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [hindbrain](http://purl.obolibrary.org/obo/UBERON_0002028)
+
+
+### basilic vein `http://purl.obolibrary.org/obo/UBERON_0001411`
+#### Removed
+- [basilic vein](http://purl.obolibrary.org/obo/UBERON_0001411) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [forelimb](http://purl.obolibrary.org/obo/UBERON_0002102)
+
+#### Added
+- [basilic vein](http://purl.obolibrary.org/obo/UBERON_0001411) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [forelimb](http://purl.obolibrary.org/obo/UBERON_0002102)
+
+
+### blastula stage `http://purl.obolibrary.org/obo/UBERON_0000108`
+#### Removed
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000006"
+
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000007"
+
+#### Added
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000091"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000054"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000012"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000089"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000025"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### bronchial artery `http://purl.obolibrary.org/obo/UBERON_0002040`
+#### Removed
+- [bronchial artery](http://purl.obolibrary.org/obo/UBERON_0002040) EquivalentTo [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [systemic arterial system](http://purl.obolibrary.org/obo/UBERON_0004571)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048))
+
+- [bronchial artery](http://purl.obolibrary.org/obo/UBERON_0002040) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048)
+
+#### Added
+- [bronchial artery](http://purl.obolibrary.org/obo/UBERON_0002040) EquivalentTo [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [systemic arterial system](http://purl.obolibrary.org/obo/UBERON_0004571)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048))
+
+- [bronchial artery](http://purl.obolibrary.org/obo/UBERON_0002040) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048)
+
+
+### bronchial vein `http://purl.obolibrary.org/obo/UBERON_0001592`
+#### Removed
+- [bronchial vein](http://purl.obolibrary.org/obo/UBERON_0001592) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185))
+
+- [bronchial vein](http://purl.obolibrary.org/obo/UBERON_0001592) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185)
+
+#### Added
+- [bronchial vein](http://purl.obolibrary.org/obo/UBERON_0001592) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185))
+
+- [bronchial vein](http://purl.obolibrary.org/obo/UBERON_0001592) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185)
+
+
+### buccal artery `http://purl.obolibrary.org/obo/UBERON_0001618`
+#### Removed
+- [buccal artery](http://purl.obolibrary.org/obo/UBERON_0001618) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cheek](http://purl.obolibrary.org/obo/UBERON_0001567)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [buccinator muscle](http://purl.obolibrary.org/obo/UBERON_0001582)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [maxillary artery](http://purl.obolibrary.org/obo/UBERON_0001616))
+
+- [buccal artery](http://purl.obolibrary.org/obo/UBERON_0001618) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cheek](http://purl.obolibrary.org/obo/UBERON_0001567)
+
+- [buccal artery](http://purl.obolibrary.org/obo/UBERON_0001618) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [buccinator muscle](http://purl.obolibrary.org/obo/UBERON_0001582)
+
+#### Added
+- [buccal artery](http://purl.obolibrary.org/obo/UBERON_0001618) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [maxillary artery](http://purl.obolibrary.org/obo/UBERON_0001616)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cheek](http://purl.obolibrary.org/obo/UBERON_0001567)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [buccinator muscle](http://purl.obolibrary.org/obo/UBERON_0001582))
+
+- [buccal artery](http://purl.obolibrary.org/obo/UBERON_0001618) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cheek](http://purl.obolibrary.org/obo/UBERON_0001567)
+
+- [buccal artery](http://purl.obolibrary.org/obo/UBERON_0001618) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [buccinator muscle](http://purl.obolibrary.org/obo/UBERON_0001582)
+
+
+### buccal mucosa `http://purl.obolibrary.org/obo/UBERON_0006956`
+
+#### Added
+- [buccal mucosa](http://purl.obolibrary.org/obo/UBERON_0006956) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [buccal mucosa](http://purl.obolibrary.org/obo/UBERON_0006956) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### capsule of lymph node `http://purl.obolibrary.org/obo/UBERON_0002194`
+#### Removed
+- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+#### Added
+- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [capsule of lymph node](http://purl.obolibrary.org/obo/UBERON_0002194) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### cardiac muscle of left atrium `http://purl.obolibrary.org/obo/UBERON_0003380`
+
+#### Added
+- [cardiac muscle of left atrium](http://purl.obolibrary.org/obo/UBERON_0003380) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [cardiac muscle of left atrium](http://purl.obolibrary.org/obo/UBERON_0003380) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### cardiac vein `http://purl.obolibrary.org/obo/UBERON_0004148`
+#### Removed
+- [cardiac vein](http://purl.obolibrary.org/obo/UBERON_0004148) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [heart](http://purl.obolibrary.org/obo/UBERON_0000948)) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349))
+
+- [cardiac vein](http://purl.obolibrary.org/obo/UBERON_0004148) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349)
+
+#### Added
+- [cardiac vein](http://purl.obolibrary.org/obo/UBERON_0004148) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [heart](http://purl.obolibrary.org/obo/UBERON_0000948)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349))
+
+- [cardiac vein](http://purl.obolibrary.org/obo/UBERON_0004148) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349)
+
+
+### cavernous artery `http://purl.obolibrary.org/obo/UBERON_0000457`
+#### Removed
+- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532))
+
+- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675)
+
+#### Added
+- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675))
+
+- [cavernous artery](http://purl.obolibrary.org/obo/UBERON_0000457) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [trigeminal ganglion](http://purl.obolibrary.org/obo/UBERON_0001675)
+
+
+### central retinal artery `http://purl.obolibrary.org/obo/UBERON_0001620`
+#### Removed
+- [central retinal artery](http://purl.obolibrary.org/obo/UBERON_0001620) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [retina](http://purl.obolibrary.org/obo/UBERON_0000966)
+
+#### Added
+- [central retinal artery](http://purl.obolibrary.org/obo/UBERON_0001620) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [retina](http://purl.obolibrary.org/obo/UBERON_0000966)
+
+
+### central retinal vein `http://purl.obolibrary.org/obo/UBERON_0001673`
+#### Removed
+- [central retinal vein](http://purl.obolibrary.org/obo/UBERON_0001673) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [retina](http://purl.obolibrary.org/obo/UBERON_0000966)
+
+#### Added
+- [central retinal vein](http://purl.obolibrary.org/obo/UBERON_0001673) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [retina](http://purl.obolibrary.org/obo/UBERON_0000966)
+
+
+### cerebellar artery `http://purl.obolibrary.org/obo/UBERON_0003472`
+#### Removed
+- [cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0003472) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037))
+
+- [cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0003472) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037)
+
+#### Added
+- [cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0003472) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037))
+
+- [cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0003472) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037)
+
+
+### cerebellar vein `http://purl.obolibrary.org/obo/UBERON_0001668`
+#### Removed
+- [cerebellar vein](http://purl.obolibrary.org/obo/UBERON_0001668) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037))
+
+- [cerebellar vein](http://purl.obolibrary.org/obo/UBERON_0001668) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037)
+
+#### Added
+- [cerebellar vein](http://purl.obolibrary.org/obo/UBERON_0001668) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037))
+
+- [cerebellar vein](http://purl.obolibrary.org/obo/UBERON_0001668) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037)
+
+
+### cerebral artery `http://purl.obolibrary.org/obo/UBERON_0004449`
+#### Removed
+- [cerebral artery](http://purl.obolibrary.org/obo/UBERON_0004449) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [telencephalon](http://purl.obolibrary.org/obo/UBERON_0001893))
+
+- [cerebral artery](http://purl.obolibrary.org/obo/UBERON_0004449) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [telencephalon](http://purl.obolibrary.org/obo/UBERON_0001893)
+
+#### Added
+- [cerebral artery](http://purl.obolibrary.org/obo/UBERON_0004449) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [telencephalon](http://purl.obolibrary.org/obo/UBERON_0001893))
+
+- [cerebral artery](http://purl.obolibrary.org/obo/UBERON_0004449) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [telencephalon](http://purl.obolibrary.org/obo/UBERON_0001893)
+
+
+### cerebral vein `http://purl.obolibrary.org/obo/UBERON_0001663`
+#### Removed
+- [cerebral vein](http://purl.obolibrary.org/obo/UBERON_0001663) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [telencephalon](http://purl.obolibrary.org/obo/UBERON_0001893))
+
+- [cerebral vein](http://purl.obolibrary.org/obo/UBERON_0001663) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [telencephalon](http://purl.obolibrary.org/obo/UBERON_0001893)
+
+#### Added
+- [cerebral vein](http://purl.obolibrary.org/obo/UBERON_0001663) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [telencephalon](http://purl.obolibrary.org/obo/UBERON_0001893))
+
+- [cerebral vein](http://purl.obolibrary.org/obo/UBERON_0001663) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [telencephalon](http://purl.obolibrary.org/obo/UBERON_0001893)
+
+
+### cervical thymic artery `http://purl.obolibrary.org/obo/UBERON_0018247`
+#### Removed
+- [cervical thymic artery](http://purl.obolibrary.org/obo/UBERON_0018247) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cervical thymus](http://purl.obolibrary.org/obo/UBERON_0009114))
+
+- [cervical thymic artery](http://purl.obolibrary.org/obo/UBERON_0018247) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cervical thymus](http://purl.obolibrary.org/obo/UBERON_0009114)
+
+#### Added
+- [cervical thymic artery](http://purl.obolibrary.org/obo/UBERON_0018247) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cervical thymus](http://purl.obolibrary.org/obo/UBERON_0009114))
+
+- [cervical thymic artery](http://purl.obolibrary.org/obo/UBERON_0018247) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cervical thymus](http://purl.obolibrary.org/obo/UBERON_0009114)
+
+
+### choroidal artery `http://purl.obolibrary.org/obo/UBERON_0013151`
+#### Removed
+- [choroidal artery](http://purl.obolibrary.org/obo/UBERON_0013151) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [choroid plexus](http://purl.obolibrary.org/obo/UBERON_0001886))
+
+- [choroidal artery](http://purl.obolibrary.org/obo/UBERON_0013151) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [choroid plexus](http://purl.obolibrary.org/obo/UBERON_0001886)
+
+#### Added
+- [choroidal artery](http://purl.obolibrary.org/obo/UBERON_0013151) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [choroid plexus](http://purl.obolibrary.org/obo/UBERON_0001886))
+
+- [choroidal artery](http://purl.obolibrary.org/obo/UBERON_0013151) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [choroid plexus](http://purl.obolibrary.org/obo/UBERON_0001886)
+
+
+### cleavage stage `http://purl.obolibrary.org/obo/UBERON_0000107`
+#### Removed
+- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000004"
+
+#### Added
+- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000064"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000088"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000010"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000049"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### colic artery `http://purl.obolibrary.org/obo/UBERON_0035548`
+#### Removed
+- [colic artery](http://purl.obolibrary.org/obo/UBERON_0035548) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155))
+
+- [colic artery](http://purl.obolibrary.org/obo/UBERON_0035548) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155)
+
+#### Added
+- [colic artery](http://purl.obolibrary.org/obo/UBERON_0035548) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155))
+
+- [colic artery](http://purl.obolibrary.org/obo/UBERON_0035548) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155)
+
+
+### commissural ganglion (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910021`
+
+#### Added
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) [label](http://www.w3.org/2000/01/rdf-schema#label) "commissural ganglion (sensu Cancer borealis)"
+
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Contains motor fibers that innervate the esophagus. Stimulating the pyloric suppressor neuron alters both pyloric and gastric rhythms but also elicits activity in a third oscillatory circuit located in the commissural ganglia called the esophageal rhythm."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/b978-0-12-809324-5.21166-8"
+
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "CG (sensu Cancer borealis)"
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/b978-0-12-809324-5.21166-8"
+
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910021"
+
+- Class: [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021)
+
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [commissural ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910021) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+
+### common penile artery `http://purl.obolibrary.org/obo/UBERON_0008320`
+#### Removed
+- [common penile artery](http://purl.obolibrary.org/obo/UBERON_0008320) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [penis](http://purl.obolibrary.org/obo/UBERON_0000989)
+
+#### Added
+- [common penile artery](http://purl.obolibrary.org/obo/UBERON_0008320) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [penis](http://purl.obolibrary.org/obo/UBERON_0000989)
+
+
+### conus artery `http://purl.obolibrary.org/obo/UBERON_0039232`
+
+#### Added
+- [conus artery](http://purl.obolibrary.org/obo/UBERON_0039232) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [conus artery](http://purl.obolibrary.org/obo/UBERON_0039232) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+
+### coronary artery `http://purl.obolibrary.org/obo/UBERON_0001621`
+#### Removed
+- [coronary artery](http://purl.obolibrary.org/obo/UBERON_0001621) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349)
+
+#### Added
+- [coronary artery](http://purl.obolibrary.org/obo/UBERON_0001621) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349)
+
+
+### cranial nerve II `http://purl.obolibrary.org/obo/UBERON_0000941`
+
+#### Added
+- [cranial nerve II](http://purl.obolibrary.org/obo/UBERON_0000941) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [cranial nerve II](http://purl.obolibrary.org/obo/UBERON_0000941) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+
+### cystic artery `http://purl.obolibrary.org/obo/UBERON_0039222`
+#### Removed
+- [cystic artery](http://purl.obolibrary.org/obo/UBERON_0039222) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cystic duct](http://purl.obolibrary.org/obo/UBERON_0001152))
+
+- [cystic artery](http://purl.obolibrary.org/obo/UBERON_0039222) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cystic duct](http://purl.obolibrary.org/obo/UBERON_0001152)
+
+#### Added
+- [cystic artery](http://purl.obolibrary.org/obo/UBERON_0039222) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cystic duct](http://purl.obolibrary.org/obo/UBERON_0001152))
+
+- [cystic artery](http://purl.obolibrary.org/obo/UBERON_0039222) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cystic duct](http://purl.obolibrary.org/obo/UBERON_0001152)
+
+
+### deep artery of clitoris `http://purl.obolibrary.org/obo/UBERON_0008322`
+#### Removed
+- [deep artery of clitoris](http://purl.obolibrary.org/obo/UBERON_0008322) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [deep vasculature](http://purl.obolibrary.org/obo/UBERON_0035551)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [corpus cavernosum clitoridis](http://purl.obolibrary.org/obo/UBERON_0006608))
+
+- [deep artery of clitoris](http://purl.obolibrary.org/obo/UBERON_0008322) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [corpus cavernosum clitoridis](http://purl.obolibrary.org/obo/UBERON_0006608)
+
+#### Added
+- [deep artery of clitoris](http://purl.obolibrary.org/obo/UBERON_0008322) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [deep vasculature](http://purl.obolibrary.org/obo/UBERON_0035551)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [corpus cavernosum clitoridis](http://purl.obolibrary.org/obo/UBERON_0006608))
+
+- [deep artery of clitoris](http://purl.obolibrary.org/obo/UBERON_0008322) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [corpus cavernosum clitoridis](http://purl.obolibrary.org/obo/UBERON_0006608)
+
+
+### deep artery of penis `http://purl.obolibrary.org/obo/UBERON_0008321`
+#### Removed
+- [deep artery of penis](http://purl.obolibrary.org/obo/UBERON_0008321) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [deep vasculature](http://purl.obolibrary.org/obo/UBERON_0035551)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [corpus cavernosum penis](http://purl.obolibrary.org/obo/UBERON_0004713))
+
+- [deep artery of penis](http://purl.obolibrary.org/obo/UBERON_0008321) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [corpus cavernosum penis](http://purl.obolibrary.org/obo/UBERON_0004713)
+
+#### Added
+- [deep artery of penis](http://purl.obolibrary.org/obo/UBERON_0008321) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [deep vasculature](http://purl.obolibrary.org/obo/UBERON_0035551)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [corpus cavernosum penis](http://purl.obolibrary.org/obo/UBERON_0004713))
+
+- [deep artery of penis](http://purl.obolibrary.org/obo/UBERON_0008321) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [corpus cavernosum penis](http://purl.obolibrary.org/obo/UBERON_0004713)
+
+
+### deep auricular artery `http://purl.obolibrary.org/obo/UBERON_0014695`
+#### Removed
+- [deep auricular artery](http://purl.obolibrary.org/obo/UBERON_0014695) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [outer epithelial layer of tympanic membrane](http://purl.obolibrary.org/obo/UBERON_0010069)
+
+#### Added
+- [deep auricular artery](http://purl.obolibrary.org/obo/UBERON_0014695) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [outer epithelial layer of tympanic membrane](http://purl.obolibrary.org/obo/UBERON_0010069)
+
+
+### deep dorsal vein of penis `http://purl.obolibrary.org/obo/UBERON_0006656`
+#### Removed
+- [deep dorsal vein of penis](http://purl.obolibrary.org/obo/UBERON_0006656) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [glans penis](http://purl.obolibrary.org/obo/UBERON_0001299)
+
+- [deep dorsal vein of penis](http://purl.obolibrary.org/obo/UBERON_0006656) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [corpus cavernosum penis](http://purl.obolibrary.org/obo/UBERON_0004713)
+
+#### Added
+- [deep dorsal vein of penis](http://purl.obolibrary.org/obo/UBERON_0006656) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [glans penis](http://purl.obolibrary.org/obo/UBERON_0001299)
+
+- [deep dorsal vein of penis](http://purl.obolibrary.org/obo/UBERON_0006656) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [corpus cavernosum penis](http://purl.obolibrary.org/obo/UBERON_0004713)
+
+
+### deep external pudendal artery `http://purl.obolibrary.org/obo/UBERON_0007316`
+#### Removed
+- [deep external pudendal artery](http://purl.obolibrary.org/obo/UBERON_0007316) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [external genitalia](http://purl.obolibrary.org/obo/UBERON_0004176)
+
+#### Added
+- [deep external pudendal artery](http://purl.obolibrary.org/obo/UBERON_0007316) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [external genitalia](http://purl.obolibrary.org/obo/UBERON_0004176)
+
+
+### deep lingual artery `http://purl.obolibrary.org/obo/UBERON_8600097`
+#### Removed
+- [deep lingual artery](http://purl.obolibrary.org/obo/UBERON_8600097) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [tongue](http://purl.obolibrary.org/obo/UBERON_0001723)
+
+
+
+### deferent duct artery `http://purl.obolibrary.org/obo/UBERON_0005192`
+#### Removed
+- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [vas deferens](http://purl.obolibrary.org/obo/UBERON_0001000))
+
+- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [vas deferens](http://purl.obolibrary.org/obo/UBERON_0001000)
+
+#### Added
+- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [vas deferens](http://purl.obolibrary.org/obo/UBERON_0001000))
+
+- [deferent duct artery](http://purl.obolibrary.org/obo/UBERON_0005192) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [vas deferens](http://purl.obolibrary.org/obo/UBERON_0001000)
+
+
+### dorsal artery of penis `http://purl.obolibrary.org/obo/UBERON_0001340`
+#### Removed
+- [dorsal artery of penis](http://purl.obolibrary.org/obo/UBERON_0001340) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [glans penis](http://purl.obolibrary.org/obo/UBERON_0001299)
+
+#### Added
+- [dorsal artery of penis](http://purl.obolibrary.org/obo/UBERON_0001340) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [glans penis](http://purl.obolibrary.org/obo/UBERON_0001299)
+
+
+### dorsal gastric nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910011`
+
+#### Added
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910011"
+
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) [label](http://www.w3.org/2000/01/rdf-schema#label) "dorsal gastric nerve (sensu Cancer borealis)"
+
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Nerve carrying dorsal gastric (DG) neurons which control the medial tooth movements in crustaceans."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:17009928"
+
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- Class: [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011)
+
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) SubClassOf [RO_0002131](http://purl.obolibrary.org/obo/RO_0002131) some [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001)
+
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+- [dorsal gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910011) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+
+### dorsal metatarsal vein `http://purl.obolibrary.org/obo/UBERON_0001549`
+#### Removed
+- [dorsal metatarsal vein](http://purl.obolibrary.org/obo/UBERON_0001549) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [metatarsus region](http://purl.obolibrary.org/obo/UBERON_0000983))
+
+- [dorsal metatarsal vein](http://purl.obolibrary.org/obo/UBERON_0001549) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [metatarsus region](http://purl.obolibrary.org/obo/UBERON_0000983)
+
+#### Added
+- [dorsal metatarsal vein](http://purl.obolibrary.org/obo/UBERON_0001549) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [metatarsus region](http://purl.obolibrary.org/obo/UBERON_0000983))
+
+- [dorsal metatarsal vein](http://purl.obolibrary.org/obo/UBERON_0001549) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [metatarsus region](http://purl.obolibrary.org/obo/UBERON_0000983)
+
+
+### dorsalis pedis artery `http://purl.obolibrary.org/obo/UBERON_0001539`
+#### Removed
+- [dorsalis pedis artery](http://purl.obolibrary.org/obo/UBERON_0001539) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pes](http://purl.obolibrary.org/obo/UBERON_0002387)
+
+#### Added
+- [dorsalis pedis artery](http://purl.obolibrary.org/obo/UBERON_0001539) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pes](http://purl.obolibrary.org/obo/UBERON_0002387)
+
+
+### efferent filamental artery `http://purl.obolibrary.org/obo/UBERON_2005018`
+#### Removed
+- [efferent filamental artery](http://purl.obolibrary.org/obo/UBERON_2005018) SubClassOf [venous blood vessel](http://purl.obolibrary.org/obo/UBERON_0003920)
+
+
+
+### efferent lamellar arteriole `http://purl.obolibrary.org/obo/UBERON_2005019`
+#### Removed
+- [efferent lamellar arteriole](http://purl.obolibrary.org/obo/UBERON_2005019) SubClassOf [venous blood vessel](http://purl.obolibrary.org/obo/UBERON_0003920)
+
+
+
+### efferent lymphatic vessel `http://purl.obolibrary.org/obo/UBERON_0010397`
+#### Removed
+- [efferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [efferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+#### Added
+- [efferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [efferent lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0010397) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### efferent portion of pharyngeal arch artery `http://purl.obolibrary.org/obo/UBERON_2000202`
+#### Removed
+- [efferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000202) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [pharyngeal arch derived gill](http://purl.obolibrary.org/obo/UBERON_0011150)) and ([RO_0002380](http://purl.obolibrary.org/obo/RO_0002380) some [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363))
+
+- [efferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000202) SubClassOf [craniocervical region vein](http://purl.obolibrary.org/obo/UBERON_0009141)
+
+- [efferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000202) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [pharyngeal arch derived gill](http://purl.obolibrary.org/obo/UBERON_0011150)
+
+#### Added
+- [efferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000202) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002380](http://purl.obolibrary.org/obo/RO_0002380) some [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [pharyngeal arch derived gill](http://purl.obolibrary.org/obo/UBERON_0011150))
+
+- [efferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000202) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [pharyngeal arch derived gill](http://purl.obolibrary.org/obo/UBERON_0011150)
+
+
+### efferent spiracular artery `http://purl.obolibrary.org/obo/UBERON_0017617`
+#### Removed
+- [efferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017617) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [spiracle (sensu Vertebrata)](http://purl.obolibrary.org/obo/UBERON_0010019)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [pharyngeal arch artery 1](http://purl.obolibrary.org/obo/UBERON_0003118))
+
+- [efferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017617) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [spiracle (sensu Vertebrata)](http://purl.obolibrary.org/obo/UBERON_0010019)
+
+- [efferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017617) SubClassOf [vein](http://purl.obolibrary.org/obo/UBERON_0001638)
+
+#### Added
+- [efferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017617) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [pharyngeal arch artery 1](http://purl.obolibrary.org/obo/UBERON_0003118)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [spiracle (sensu Vertebrata)](http://purl.obolibrary.org/obo/UBERON_0010019))
+
+- [efferent spiracular artery](http://purl.obolibrary.org/obo/UBERON_0017617) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [spiracle (sensu Vertebrata)](http://purl.obolibrary.org/obo/UBERON_0010019)
+
+
+### embryo stage `http://purl.obolibrary.org/obo/UBERON_0000068`
+#### Removed
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000002"
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000002"
+
+#### Added
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:AcarDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:FcatDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DsimDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DpseDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:BtauDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:EcabDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OanaDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000045"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CporDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CfamDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OcunDv_0000002"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000042"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### entire sense organ system `http://purl.obolibrary.org/obo/UBERON_0004456`
+
+#### Added
+- [entire sense organ system](http://purl.obolibrary.org/obo/UBERON_0004456) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [entire sense organ system](http://purl.obolibrary.org/obo/UBERON_0004456) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+
+### epigastric artery `http://purl.obolibrary.org/obo/UBERON_0006349`
+#### Removed
+- [epigastric artery](http://purl.obolibrary.org/obo/UBERON_0006349) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [anterior abdominal wall](http://purl.obolibrary.org/obo/UBERON_0006635))
+
+- [epigastric artery](http://purl.obolibrary.org/obo/UBERON_0006349) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [anterior abdominal wall](http://purl.obolibrary.org/obo/UBERON_0006635)
+
+#### Added
+- [epigastric artery](http://purl.obolibrary.org/obo/UBERON_0006349) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [anterior abdominal wall](http://purl.obolibrary.org/obo/UBERON_0006635))
+
+- [epigastric artery](http://purl.obolibrary.org/obo/UBERON_0006349) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [anterior abdominal wall](http://purl.obolibrary.org/obo/UBERON_0006635)
+
+
+### epigastric vein `http://purl.obolibrary.org/obo/UBERON_0006356`
+#### Removed
+- [epigastric vein](http://purl.obolibrary.org/obo/UBERON_0006356) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [anterior abdominal wall](http://purl.obolibrary.org/obo/UBERON_0006635))
+
+- [epigastric vein](http://purl.obolibrary.org/obo/UBERON_0006356) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [anterior abdominal wall](http://purl.obolibrary.org/obo/UBERON_0006635)
+
+#### Added
+- [epigastric vein](http://purl.obolibrary.org/obo/UBERON_0006356) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [anterior abdominal wall](http://purl.obolibrary.org/obo/UBERON_0006635))
+
+- [epigastric vein](http://purl.obolibrary.org/obo/UBERON_0006356) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [anterior abdominal wall](http://purl.obolibrary.org/obo/UBERON_0006635)
+
+
+### epithelium of conjunctiva `http://purl.obolibrary.org/obo/UBERON_0006763`
+
+#### Added
+- [epithelium of conjunctiva](http://purl.obolibrary.org/obo/UBERON_0006763) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [epithelium of conjunctiva](http://purl.obolibrary.org/obo/UBERON_0006763) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### esophageal artery `http://purl.obolibrary.org/obo/UBERON_0035539`
+#### Removed
+- [esophageal artery](http://purl.obolibrary.org/obo/UBERON_0035539) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [esophagus](http://purl.obolibrary.org/obo/UBERON_0001043))
+
+- [esophageal artery](http://purl.obolibrary.org/obo/UBERON_0035539) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [esophagus](http://purl.obolibrary.org/obo/UBERON_0001043)
+
+#### Added
+- [esophageal artery](http://purl.obolibrary.org/obo/UBERON_0035539) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [esophagus](http://purl.obolibrary.org/obo/UBERON_0001043))
+
+- [esophageal artery](http://purl.obolibrary.org/obo/UBERON_0035539) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [esophagus](http://purl.obolibrary.org/obo/UBERON_0001043)
+
+
+### esophageal ganglion (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910020`
+
+#### Added
+- [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020) [label](http://www.w3.org/2000/01/rdf-schema#label) "esophageal ganglion (sensu Cancer borealis)"
+
+- [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Neurons with cell bodies in the esophageal ganglion turn on the gastric mill rhythm and strongly affects the pyloric rhythm."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
+
+- [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910020"
+
+- [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- Class: [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020)
+
+- [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+- [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [esophageal ganglion (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910020) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+
+### esophageal nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910019`
+
+#### Added
+- [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "innervates the foregut and midgut"
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
+
+- [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910019"
+
+- [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019) [label](http://www.w3.org/2000/01/rdf-schema#label) "esophageal nerve (sensu Cancer borealis)"
+
+- Class: [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019)
+
+- [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+- [esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910019) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010)
+
+
+### exocrine system `http://purl.obolibrary.org/obo/UBERON_0002330`
+
+#### Added
+- [exocrine system](http://purl.obolibrary.org/obo/UBERON_0002330) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [exocrine system](http://purl.obolibrary.org/obo/UBERON_0002330) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### external iliac vein `http://purl.obolibrary.org/obo/UBERON_0001316`
+#### Removed
+- [external iliac vein](http://purl.obolibrary.org/obo/UBERON_0001316) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [hindlimb](http://purl.obolibrary.org/obo/UBERON_0002103)
+
+#### Added
+- [external iliac vein](http://purl.obolibrary.org/obo/UBERON_0001316) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [hindlimb](http://purl.obolibrary.org/obo/UBERON_0002103)
+
+
+### facial artery `http://purl.obolibrary.org/obo/UBERON_0001612`
+#### Removed
+- [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [face](http://purl.obolibrary.org/obo/UBERON_0001456)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070))
+
+- [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [face](http://purl.obolibrary.org/obo/UBERON_0001456)
+
+#### Added
+- [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [face](http://purl.obolibrary.org/obo/UBERON_0001456))
+
+- [facial artery](http://purl.obolibrary.org/obo/UBERON_0001612) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [face](http://purl.obolibrary.org/obo/UBERON_0001456)
+
+
+### fully formed stage `http://purl.obolibrary.org/obo/UBERON_0000066`
+
+#### Added
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000076"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:EcabDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DpseDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000084"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000040"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000061"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:BtauDv_0000078"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DsimDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000052"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000052"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CfamDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000024"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000032"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0010000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000092"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:FcatDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000041"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OanaDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### gastric vein `http://purl.obolibrary.org/obo/UBERON_0004450`
+#### Removed
+- [gastric vein](http://purl.obolibrary.org/obo/UBERON_0004450) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lesser curvature of stomach](http://purl.obolibrary.org/obo/UBERON_0001163))
+
+- [gastric vein](http://purl.obolibrary.org/obo/UBERON_0004450) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lesser curvature of stomach](http://purl.obolibrary.org/obo/UBERON_0001163)
+
+#### Added
+- [gastric vein](http://purl.obolibrary.org/obo/UBERON_0004450) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lesser curvature of stomach](http://purl.obolibrary.org/obo/UBERON_0001163))
+
+- [gastric vein](http://purl.obolibrary.org/obo/UBERON_0004450) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lesser curvature of stomach](http://purl.obolibrary.org/obo/UBERON_0001163)
+
+
+### gastrocnemius vein `http://purl.obolibrary.org/obo/UBERON_0013143`
+#### Removed
+- [gastrocnemius vein](http://purl.obolibrary.org/obo/UBERON_0013143) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [gastrocnemius](http://purl.obolibrary.org/obo/UBERON_0001388))
+
+- [gastrocnemius vein](http://purl.obolibrary.org/obo/UBERON_0013143) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [gastrocnemius](http://purl.obolibrary.org/obo/UBERON_0001388)
+
+#### Added
+- [gastrocnemius vein](http://purl.obolibrary.org/obo/UBERON_0013143) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [gastrocnemius](http://purl.obolibrary.org/obo/UBERON_0001388))
+
+- [gastrocnemius vein](http://purl.obolibrary.org/obo/UBERON_0013143) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [gastrocnemius](http://purl.obolibrary.org/obo/UBERON_0001388)
+
+
+### gastroepiploic artery `http://purl.obolibrary.org/obo/UBERON_0009025`
+#### Removed
+- [gastroepiploic artery](http://purl.obolibrary.org/obo/UBERON_0009025) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [greater omentum](http://purl.obolibrary.org/obo/UBERON_0005448)
+
+- [gastroepiploic artery](http://purl.obolibrary.org/obo/UBERON_0009025) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [stomach](http://purl.obolibrary.org/obo/UBERON_0000945)
+
+#### Added
+- [gastroepiploic artery](http://purl.obolibrary.org/obo/UBERON_0009025) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [stomach](http://purl.obolibrary.org/obo/UBERON_0000945)
+
+- [gastroepiploic artery](http://purl.obolibrary.org/obo/UBERON_0009025) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [greater omentum](http://purl.obolibrary.org/obo/UBERON_0005448)
+
+
+### gastropyloric nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910012`
+
+#### Added
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910012"
+
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Consists of gastropyloric receptor (GPR) neurons, which are stretch receptors that innervate stomach muscles in crustaceans."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:26888106"
+
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:17009928"
+
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) [label](http://www.w3.org/2000/01/rdf-schema#label) "gastropyloric nerve (sensu Cancer borealis)"
+
+- Class: [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012)
+
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [gastropyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910012) SubClassOf [RO_0002131](http://purl.obolibrary.org/obo/RO_0002131) some [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001)
+
+
+### gastrula stage `http://purl.obolibrary.org/obo/UBERON_0000109`
+#### Removed
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000010"
+
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000013"
+
+#### Added
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000026"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000013"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000090"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000016"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000092"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000010"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### genital artery `http://purl.obolibrary.org/obo/UBERON_0010192`
+#### Removed
+- [genital artery](http://purl.obolibrary.org/obo/UBERON_0010192) EquivalentTo [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [gonad](http://purl.obolibrary.org/obo/UBERON_0000991))
+
+- [genital artery](http://purl.obolibrary.org/obo/UBERON_0010192) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [gonad](http://purl.obolibrary.org/obo/UBERON_0000991)
+
+#### Added
+- [genital artery](http://purl.obolibrary.org/obo/UBERON_0010192) EquivalentTo [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [gonad](http://purl.obolibrary.org/obo/UBERON_0000991))
+
+- [genital artery](http://purl.obolibrary.org/obo/UBERON_0010192) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [gonad](http://purl.obolibrary.org/obo/UBERON_0000991)
+
+
+### gingiva `http://purl.obolibrary.org/obo/UBERON_0001828`
+
+#### Added
+- [gingiva](http://purl.obolibrary.org/obo/UBERON_0001828) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [gingiva](http://purl.obolibrary.org/obo/UBERON_0001828) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### gland of digestive tract `http://purl.obolibrary.org/obo/UBERON_0003408`
+
+#### Added
+- [gland of digestive tract](http://purl.obolibrary.org/obo/UBERON_0003408) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [gland of digestive tract](http://purl.obolibrary.org/obo/UBERON_0003408) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+
+### granular layer of cerebellar cortex `http://purl.obolibrary.org/obo/UBERON_0002956`
+#### Removed
+- [granular layer of cerebellar cortex](http://purl.obolibrary.org/obo/UBERON_0002956) SubClassOf [BFO_0000051](http://purl.obolibrary.org/obo/BFO_0000051) some [CL_0000555](http://purl.obolibrary.org/obo/CL_0000555)
+
+#### Added
+- [granular layer of cerebellar cortex](http://purl.obolibrary.org/obo/UBERON_0002956) SubClassOf [BFO_0000051](http://purl.obolibrary.org/obo/BFO_0000051) some [CL_4023161](http://purl.obolibrary.org/obo/CL_4023161)
+
+
+### gustatory system `http://purl.obolibrary.org/obo/UBERON_0001033`
+
+#### Added
+- [gustatory system](http://purl.obolibrary.org/obo/UBERON_0001033) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [gustatory system](http://purl.obolibrary.org/obo/UBERON_0001033) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### hair follicle bulge `http://purl.obolibrary.org/obo/UBERON_0005975`
+
+#### Added
+- [hair follicle bulge](http://purl.obolibrary.org/obo/UBERON_0005975) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [hair follicle bulge](http://purl.obolibrary.org/obo/UBERON_0005975) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+
+### helicine artery of penis `http://purl.obolibrary.org/obo/UBERON_0015174`
+#### Removed
+- [helicine artery of penis](http://purl.obolibrary.org/obo/UBERON_0015174) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [penis](http://purl.obolibrary.org/obo/UBERON_0000989)
+
+#### Added
+- [helicine artery of penis](http://purl.obolibrary.org/obo/UBERON_0015174) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [penis](http://purl.obolibrary.org/obo/UBERON_0000989)
+
+
+### hepatic artery `http://purl.obolibrary.org/obo/UBERON_0001193`
+#### Removed
+- [hepatic artery](http://purl.obolibrary.org/obo/UBERON_0001193) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107))
+
+- [hepatic artery](http://purl.obolibrary.org/obo/UBERON_0001193) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107)
+
+#### Added
+- [hepatic artery](http://purl.obolibrary.org/obo/UBERON_0001193) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107))
+
+- [hepatic artery](http://purl.obolibrary.org/obo/UBERON_0001193) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107)
+
+
+### hepatic portal venule `http://purl.obolibrary.org/obo/UBERON_8600085`
+#### Removed
+- [hepatic portal venule](http://purl.obolibrary.org/obo/UBERON_8600085) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637)
+
+
+
+### hepatic vein `http://purl.obolibrary.org/obo/UBERON_0001143`
+#### Removed
+- [hepatic vein](http://purl.obolibrary.org/obo/UBERON_0001143) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107))
+
+- [hepatic vein](http://purl.obolibrary.org/obo/UBERON_0001143) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107)
+
+#### Added
+- [hepatic vein](http://purl.obolibrary.org/obo/UBERON_0001143) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107))
+
+- [hepatic vein](http://purl.obolibrary.org/obo/UBERON_0001143) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107)
+
+
+### hyaloid artery `http://purl.obolibrary.org/obo/UBERON_0002270`
+#### Removed
+- [hyaloid artery](http://purl.obolibrary.org/obo/UBERON_0002270) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lens of camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000965)
+
+#### Added
+- [hyaloid artery](http://purl.obolibrary.org/obo/UBERON_0002270) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lens of camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000965)
+
+
+### hypophysial artery `http://purl.obolibrary.org/obo/UBERON_0035403`
+#### Removed
+- [hypophysial artery](http://purl.obolibrary.org/obo/UBERON_0035403) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pituitary gland](http://purl.obolibrary.org/obo/UBERON_0000007))
+
+- [hypophysial artery](http://purl.obolibrary.org/obo/UBERON_0035403) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pituitary gland](http://purl.obolibrary.org/obo/UBERON_0000007)
+
+#### Added
+- [hypophysial artery](http://purl.obolibrary.org/obo/UBERON_0035403) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pituitary gland](http://purl.obolibrary.org/obo/UBERON_0000007))
+
+- [hypophysial artery](http://purl.obolibrary.org/obo/UBERON_0035403) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pituitary gland](http://purl.obolibrary.org/obo/UBERON_0000007)
+
+
+### ileal vein `http://purl.obolibrary.org/obo/UBERON_0001217`
+#### Removed
+- [ileal vein](http://purl.obolibrary.org/obo/UBERON_0001217) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116))
+
+- [ileal vein](http://purl.obolibrary.org/obo/UBERON_0001217) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)
+
+#### Added
+- [ileal vein](http://purl.obolibrary.org/obo/UBERON_0001217) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116))
+
+- [ileal vein](http://purl.obolibrary.org/obo/UBERON_0001217) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)
+
+
+### ileocolic artery `http://purl.obolibrary.org/obo/UBERON_0001197`
+#### Removed
+- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182))
+
+- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)
+
+- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154)
+
+- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)
+
+#### Added
+- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116))
+
+- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)
+
+- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)
+
+- [ileocolic artery](http://purl.obolibrary.org/obo/UBERON_0001197) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154)
+
+
+### ileocolic vein `http://purl.obolibrary.org/obo/UBERON_0001219`
+#### Removed
+- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) EquivalentTo [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155)) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138))
+
+- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)
+
+- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155)
+
+#### Added
+- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) EquivalentTo [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116))
+
+- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [caecum](http://purl.obolibrary.org/obo/UBERON_0001153)
+
+- [ileocolic vein](http://purl.obolibrary.org/obo/UBERON_0001219) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155)
+
+
+### iliac artery `http://purl.obolibrary.org/obo/UBERON_0005609`
+#### Removed
+- [iliac artery](http://purl.obolibrary.org/obo/UBERON_0005609) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pelvic region of trunk](http://purl.obolibrary.org/obo/UBERON_0002355)
+
+#### Added
+- [iliac artery](http://purl.obolibrary.org/obo/UBERON_0005609) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pelvic region of trunk](http://purl.obolibrary.org/obo/UBERON_0002355)
+
+
+### iliac vein `http://purl.obolibrary.org/obo/UBERON_0005610`
+#### Removed
+- [iliac vein](http://purl.obolibrary.org/obo/UBERON_0005610) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [pectoral complex](http://purl.obolibrary.org/obo/UBERON_0010708)
+
+#### Added
+- [iliac vein](http://purl.obolibrary.org/obo/UBERON_0005610) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [pectoral complex](http://purl.obolibrary.org/obo/UBERON_0010708)
+
+
+### iliolumbar vein `http://purl.obolibrary.org/obo/UBERON_0001320`
+#### Removed
+- [iliolumbar vein](http://purl.obolibrary.org/obo/UBERON_0001320) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [vertebra](http://purl.obolibrary.org/obo/UBERON_0002412)
+
+#### Added
+- [iliolumbar vein](http://purl.obolibrary.org/obo/UBERON_0001320) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [vertebra](http://purl.obolibrary.org/obo/UBERON_0002412)
+
+
+### infant stage `http://purl.obolibrary.org/obo/UBERON_0034920`
+
+#### Added
+- [infant stage](http://purl.obolibrary.org/obo/UBERON_0034920) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000177"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [infant stage](http://purl.obolibrary.org/obo/UBERON_0034920) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000033"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [infant stage](http://purl.obolibrary.org/obo/UBERON_0034920) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000053"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [infant stage](http://purl.obolibrary.org/obo/UBERON_0034920) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000085"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [infant stage](http://purl.obolibrary.org/obo/UBERON_0034920) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000261"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [infant stage](http://purl.obolibrary.org/obo/UBERON_0034920) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000057"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### inferior esophageal nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910017`
+
+#### Added
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior esophageal nerve (sensu Cancer borealis)"
+
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The inferior esophageal nerve (ION) is one of the four nerves that make up the stomatogastric nerve (SGN)."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
+
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ION (sensu Cancer borealis)"
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
+
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910017"
+
+- Class: [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017)
+
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010)
+
+- [inferior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910017) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+
+### inferior mesenteric artery `http://purl.obolibrary.org/obo/UBERON_0001183`
+#### Removed
+- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) EquivalentTo [mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0005616) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [rectum](http://purl.obolibrary.org/obo/UBERON_0001052)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159))
+
+- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)
+
+- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159)
+
+#### Added
+- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) EquivalentTo [mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0005616) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [rectum](http://purl.obolibrary.org/obo/UBERON_0001052)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159))
+
+- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159)
+
+- [inferior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001183) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)
+
+
+### inferior mesenteric vein `http://purl.obolibrary.org/obo/UBERON_0001215`
+#### Removed
+- [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215) EquivalentTo [mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0005617) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059))
+
+- [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059)
+
+#### Added
+- [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215) EquivalentTo [mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0005617) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059))
+
+- [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059)
+
+
+### inferior palpebral vein `http://purl.obolibrary.org/obo/UBERON_0002459`
+#### Removed
+- [inferior palpebral vein](http://purl.obolibrary.org/obo/UBERON_0002459) EquivalentTo [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lower eyelid](http://purl.obolibrary.org/obo/UBERON_0001713))
+
+- [inferior palpebral vein](http://purl.obolibrary.org/obo/UBERON_0002459) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lower eyelid](http://purl.obolibrary.org/obo/UBERON_0001713)
+
+#### Added
+- [inferior palpebral vein](http://purl.obolibrary.org/obo/UBERON_0002459) EquivalentTo [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lower eyelid](http://purl.obolibrary.org/obo/UBERON_0001713))
+
+- [inferior palpebral vein](http://purl.obolibrary.org/obo/UBERON_0002459) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lower eyelid](http://purl.obolibrary.org/obo/UBERON_0001713)
+
+
+### inferior rectal artery `http://purl.obolibrary.org/obo/UBERON_0001357`
+#### Removed
+- [inferior rectal artery](http://purl.obolibrary.org/obo/UBERON_0001357) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159)
+
+#### Added
+- [inferior rectal artery](http://purl.obolibrary.org/obo/UBERON_0001357) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159)
+
+
+### inferior superficial cervical thymic artery `http://purl.obolibrary.org/obo/UBERON_0018248`
+#### Removed
+- [inferior superficial cervical thymic artery](http://purl.obolibrary.org/obo/UBERON_0018248) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [superficial cervical thymus](http://purl.obolibrary.org/obo/UBERON_0018244)
+
+#### Added
+- [inferior superficial cervical thymic artery](http://purl.obolibrary.org/obo/UBERON_0018248) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [superficial cervical thymus](http://purl.obolibrary.org/obo/UBERON_0018244)
+
+
+### inferior vena cava `http://purl.obolibrary.org/obo/UBERON_0001072`
+#### Removed
+- [inferior vena cava](http://purl.obolibrary.org/obo/UBERON_0001072) EquivalentTo [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [posterior region of body](http://purl.obolibrary.org/obo/UBERON_0000154))
+
+- [inferior vena cava](http://purl.obolibrary.org/obo/UBERON_0001072) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [posterior region of body](http://purl.obolibrary.org/obo/UBERON_0000154)
+
+#### Added
+- [inferior vena cava](http://purl.obolibrary.org/obo/UBERON_0001072) EquivalentTo [vena cava](http://purl.obolibrary.org/obo/UBERON_0004087) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [posterior region of body](http://purl.obolibrary.org/obo/UBERON_0000154))
+
+- [inferior vena cava](http://purl.obolibrary.org/obo/UBERON_0001072) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [posterior region of body](http://purl.obolibrary.org/obo/UBERON_0000154)
+
+
+### inferior vesical artery `http://purl.obolibrary.org/obo/UBERON_0001311`
+#### Removed
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) EquivalentTo [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082))
+
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082)
+
+#### Added
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) EquivalentTo [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082))
+
+- [inferior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001311) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082)
+
+
+### inferior vesical vein `http://purl.obolibrary.org/obo/UBERON_0001318`
+#### Removed
+- [inferior vesical vein](http://purl.obolibrary.org/obo/UBERON_0001318) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082))
+
+- [inferior vesical vein](http://purl.obolibrary.org/obo/UBERON_0001318) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082)
+
+#### Added
+- [inferior vesical vein](http://purl.obolibrary.org/obo/UBERON_0001318) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082))
+
+- [inferior vesical vein](http://purl.obolibrary.org/obo/UBERON_0001318) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [fundus of urinary bladder](http://purl.obolibrary.org/obo/UBERON_0006082)
+
+
+### insect stomatogastric nervous system `http://purl.obolibrary.org/obo/UBERON_6005096`
+#### Removed
+- [insect stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_6005096) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6656](http://purl.obolibrary.org/obo/NCBITaxon_6656)
+
+- [insect stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_6005096) SubClassOf [organ system subdivision](http://purl.obolibrary.org/obo/UBERON_0011216)
+
+#### Added
+- [insect stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_6005096) SubClassOf [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+
+### intercostal artery `http://purl.obolibrary.org/obo/UBERON_0005612`
+#### Removed
+- [intercostal artery](http://purl.obolibrary.org/obo/UBERON_0005612) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [intercostal space](http://purl.obolibrary.org/obo/UBERON_0012198)
+
+#### Added
+- [intercostal artery](http://purl.obolibrary.org/obo/UBERON_0005612) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004)
+
+
+### intercostal element `http://purl.obolibrary.org/obo/UBERON_8450004`
+
+#### Added
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-6095-8718](https://orcid.org/0000-0002-6095-8718)
+
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) [label](http://www.w3.org/2000/01/rdf-schema#label) "intercostal element"
+
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8450004"
+
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) [date](http://purl.org/dc/terms/date) "2024-11-11T17:58:05Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
+
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "An anatomical structure located within an intercostal space."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-6095-8718"
+
+- Class: [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004)
+
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) EquivalentTo [anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000061) and ([RO_0001025](http://purl.obolibrary.org/obo/RO_0001025) some [intercostal space](http://purl.obolibrary.org/obo/UBERON_0012198))
+
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) SubClassOf [RO_0001025](http://purl.obolibrary.org/obo/RO_0001025) some [intercostal space](http://purl.obolibrary.org/obo/UBERON_0012198)
+
+- [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004) SubClassOf [anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000061)
+
+
+### intercostal lymph node `http://purl.obolibrary.org/obo/UBERON_0012236`
+#### Removed
+- [intercostal lymph node](http://purl.obolibrary.org/obo/UBERON_0012236) SubClassOf [RO_0001025](http://purl.obolibrary.org/obo/RO_0001025) some [intercostal space](http://purl.obolibrary.org/obo/UBERON_0012198)
+
+#### Added
+- [intercostal lymph node](http://purl.obolibrary.org/obo/UBERON_0012236) SubClassOf [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004)
+
+
+### intercostal muscle `http://purl.obolibrary.org/obo/UBERON_0001111`
+#### Removed
+- [intercostal muscle](http://purl.obolibrary.org/obo/UBERON_0001111) SubClassOf [RO_0001025](http://purl.obolibrary.org/obo/RO_0001025) some [intercostal space](http://purl.obolibrary.org/obo/UBERON_0012198)
+
+#### Added
+- [intercostal muscle](http://purl.obolibrary.org/obo/UBERON_0001111) SubClassOf [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004)
+
+
+### intercostal pre-muscle mass `http://purl.obolibrary.org/obo/UBERON_0010970`
+#### Removed
+- [intercostal pre-muscle mass](http://purl.obolibrary.org/obo/UBERON_0010970) SubClassOf [RO_0001025](http://purl.obolibrary.org/obo/RO_0001025) some [intercostal space](http://purl.obolibrary.org/obo/UBERON_0012198)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "cjm"
+
+#### Added
+- [intercostal pre-muscle mass](http://purl.obolibrary.org/obo/UBERON_0010970) SubClassOf [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004)
+
+
+### intercostal vein `http://purl.obolibrary.org/obo/UBERON_0012197`
+#### Removed
+- [intercostal vein](http://purl.obolibrary.org/obo/UBERON_0012197) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [intercostal space](http://purl.obolibrary.org/obo/UBERON_0012198))
+
+- [intercostal vein](http://purl.obolibrary.org/obo/UBERON_0012197) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [intercostal space](http://purl.obolibrary.org/obo/UBERON_0012198)
+
+#### Added
+- [intercostal vein](http://purl.obolibrary.org/obo/UBERON_0012197) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004))
+
+- [intercostal vein](http://purl.obolibrary.org/obo/UBERON_0012197) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [intercostal element](http://purl.obolibrary.org/obo/UBERON_8450004)
+
+
+### interlobar artery `http://purl.obolibrary.org/obo/UBERON_0009885`
+#### Removed
+- [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913))
+
+- [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913)
+
+#### Added
+- [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913))
+
+- [interlobar artery](http://purl.obolibrary.org/obo/UBERON_0009885) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913)
+
+
+### interlobar vein `http://purl.obolibrary.org/obo/UBERON_0009887`
+#### Removed
+- [interlobar vein](http://purl.obolibrary.org/obo/UBERON_0009887) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913))
+
+- [interlobar vein](http://purl.obolibrary.org/obo/UBERON_0009887) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913)
+
+#### Added
+- [interlobar vein](http://purl.obolibrary.org/obo/UBERON_0009887) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913))
+
+- [interlobar vein](http://purl.obolibrary.org/obo/UBERON_0009887) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [renal lobe](http://purl.obolibrary.org/obo/UBERON_0009913)
+
+
+### internal carotid artery `http://purl.obolibrary.org/obo/UBERON_0001532`
+#### Removed
+- [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [eye](http://purl.obolibrary.org/obo/UBERON_0000970)
+
+- [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [brain](http://purl.obolibrary.org/obo/UBERON_0000955)
+
+#### Added
+- [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [eye](http://purl.obolibrary.org/obo/UBERON_0000970)
+
+- [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [brain](http://purl.obolibrary.org/obo/UBERON_0000955)
+
+
+### internal iliac vein `http://purl.obolibrary.org/obo/UBERON_0001317`
+#### Removed
+- [internal iliac vein](http://purl.obolibrary.org/obo/UBERON_0001317) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [pelvic region element](http://purl.obolibrary.org/obo/UBERON_0005179)
+
+#### Added
+- [internal iliac vein](http://purl.obolibrary.org/obo/UBERON_0001317) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [pelvic region element](http://purl.obolibrary.org/obo/UBERON_0005179)
+
+
+### internal jugular vein `http://purl.obolibrary.org/obo/UBERON_0001586`
+#### Removed
+- [internal jugular vein](http://purl.obolibrary.org/obo/UBERON_0001586) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [face](http://purl.obolibrary.org/obo/UBERON_0001456)
+
+- [internal jugular vein](http://purl.obolibrary.org/obo/UBERON_0001586) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [brain](http://purl.obolibrary.org/obo/UBERON_0000955)
+
+#### Added
+- [internal jugular vein](http://purl.obolibrary.org/obo/UBERON_0001586) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [face](http://purl.obolibrary.org/obo/UBERON_0001456)
+
+- [internal jugular vein](http://purl.obolibrary.org/obo/UBERON_0001586) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [brain](http://purl.obolibrary.org/obo/UBERON_0000955)
+
+
+### internal pudendal artery `http://purl.obolibrary.org/obo/UBERON_0007315`
+#### Removed
+- [internal pudendal artery](http://purl.obolibrary.org/obo/UBERON_0007315) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [external genitalia](http://purl.obolibrary.org/obo/UBERON_0004176)
+
+#### Added
+- [internal pudendal artery](http://purl.obolibrary.org/obo/UBERON_0007315) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [external genitalia](http://purl.obolibrary.org/obo/UBERON_0004176)
+
+
+### internal thoracic artery `http://purl.obolibrary.org/obo/UBERON_0002456`
+#### Removed
+- [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [breast](http://purl.obolibrary.org/obo/UBERON_0000310)
+
+#### Added
+- [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [breast](http://purl.obolibrary.org/obo/UBERON_0000310)
+
+
+### intra-acinar arteriole `http://purl.obolibrary.org/obo/UBERON_8600094`
+#### Removed
+- [intra-acinar arteriole](http://purl.obolibrary.org/obo/UBERON_8600094) SubClassOf [respiratory system artery](http://purl.obolibrary.org/obo/UBERON_0003469)
+
+
+
+### jejunal artery `http://purl.obolibrary.org/obo/UBERON_0018255`
+#### Removed
+- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182))
+
+- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)
+
+#### Added
+- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115))
+
+- [jejunal artery](http://purl.obolibrary.org/obo/UBERON_0018255) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)
+
+
+### jejunal vein `http://purl.obolibrary.org/obo/UBERON_0001216`
+#### Removed
+- [jejunal vein](http://purl.obolibrary.org/obo/UBERON_0001216) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115))
+
+- [jejunal vein](http://purl.obolibrary.org/obo/UBERON_0001216) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)
+
+#### Added
+- [jejunal vein](http://purl.obolibrary.org/obo/UBERON_0001216) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115))
+
+- [jejunal vein](http://purl.obolibrary.org/obo/UBERON_0001216) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)
+
+
+### jugular vein `http://purl.obolibrary.org/obo/UBERON_0004711`
+#### Removed
+- [jugular vein](http://purl.obolibrary.org/obo/UBERON_0004711) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [head](http://purl.obolibrary.org/obo/UBERON_0000033)
+
+#### Added
+- [jugular vein](http://purl.obolibrary.org/obo/UBERON_0004711) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [head](http://purl.obolibrary.org/obo/UBERON_0000033)
+
+
+### junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910022`
+
+#### Added
+- [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910022"
+
+- [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The junction between the stomatogastric nerve (STN) and the superior esophageal nerve (SON) shows synaptic structures. Octopamine may be released at this site by projection neurons; its application at this junction induces action potentials in the axons of the modulatory commissural neuron 5 (MCN5) that project from the commissural ganglia to the stomatogastric ganglion (STG)."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:15306640"
+
+- [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022) [label](http://www.w3.org/2000/01/rdf-schema#label) "junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)"
+
+- Class: [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022)
+
+- [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+- [junction of superior esophageal nerve and stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910022) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+
+### juvenile stage `http://purl.obolibrary.org/obo/UBERON_0034919`
+
+#### Added
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000178"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000058"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000014"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000271"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### lacrimal artery `http://purl.obolibrary.org/obo/UBERON_0001622`
+#### Removed
+- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817))
+
+- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817)
+
+#### Added
+- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817))
+
+- [lacrimal artery](http://purl.obolibrary.org/obo/UBERON_0001622) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817)
+
+
+### lacrimal vein `http://purl.obolibrary.org/obo/UBERON_0018256`
+#### Removed
+- [lacrimal vein](http://purl.obolibrary.org/obo/UBERON_0018256) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817))
+
+- [lacrimal vein](http://purl.obolibrary.org/obo/UBERON_0018256) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817)
+
+#### Added
+- [lacrimal vein](http://purl.obolibrary.org/obo/UBERON_0018256) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817))
+
+- [lacrimal vein](http://purl.obolibrary.org/obo/UBERON_0018256) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lacrimal gland](http://purl.obolibrary.org/obo/UBERON_0001817)
+
+
+### larval stage `http://purl.obolibrary.org/obo/UBERON_0000069`
+
+#### Added
+- [larval stage](http://purl.obolibrary.org/obo/UBERON_0000069) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000039"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [larval stage](http://purl.obolibrary.org/obo/UBERON_0000069) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DpseDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [larval stage](http://purl.obolibrary.org/obo/UBERON_0000069) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DsimDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### late adult stage `http://purl.obolibrary.org/obo/UBERON_0007222`
+#### Removed
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000093"
+
+#### Added
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OanaDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CporDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000040"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000134"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000045"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000227"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000025"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:EcabDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000008"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CfamDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:AcarDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000039"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000008"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000080"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000008"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000060"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OcunDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:FcatDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:BtauDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### late embryonic stage `http://purl.obolibrary.org/obo/UBERON_0007220`
+#### Removed
+- [late embryonic stage](http://purl.obolibrary.org/obo/UBERON_0007220) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000031"
+
+#### Added
+- [late embryonic stage](http://purl.obolibrary.org/obo/UBERON_0007220) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000011"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late embryonic stage](http://purl.obolibrary.org/obo/UBERON_0007220) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000037"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late embryonic stage](http://purl.obolibrary.org/obo/UBERON_0007220) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000031"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [late embryonic stage](http://purl.obolibrary.org/obo/UBERON_0007220) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000080"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### lateral gastric nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910013`
+
+#### Added
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) [label](http://www.w3.org/2000/01/rdf-schema#label) "lateral gastric nerve (sensu Cancer borealis)"
+
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Consists of lateral gastric (LG) neurons. The alternation between the lateral gastric neurons/medial gastric neurons and the lateral posterior gastric neurons control the movements of the lateral teeth in crustaceans."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:17009928"
+
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910013"
+
+- Class: [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013)
+
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) SubClassOf [RO_0002131](http://purl.obolibrary.org/obo/RO_0002131) some [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001)
+
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+- [lateral gastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910013) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+
+### lateral pretrosal artery `http://purl.obolibrary.org/obo/UBERON_3010494`
+#### Removed
+- [lateral pretrosal artery](http://purl.obolibrary.org/obo/UBERON_3010494) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ear](http://purl.obolibrary.org/obo/UBERON_0001690)
+
+#### Added
+- [lateral pretrosal artery](http://purl.obolibrary.org/obo/UBERON_3010494) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ear](http://purl.obolibrary.org/obo/UBERON_0001690)
+
+
+### lateral ventricular nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910014`
+
+#### Added
+- [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014) [label](http://www.w3.org/2000/01/rdf-schema#label) "lateral ventricular nerve (sensu Cancer borealis)"
+
+- [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The motor axons that project into the dorsal ventricular nerve bifurcate and then project into both lateral ventricular nerves."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:10561445"
+
+- [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910014"
+
+- [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- Class: [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014)
+
+- [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+- [lateral ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910014) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+
+### left colic artery `http://purl.obolibrary.org/obo/UBERON_8410022`
+#### Removed
+- [left colic artery](http://purl.obolibrary.org/obo/UBERON_8410022) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)
+
+- [left colic artery](http://purl.obolibrary.org/obo/UBERON_8410022) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)
+
+#### Added
+- [left colic artery](http://purl.obolibrary.org/obo/UBERON_8410022) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)
+
+- [left colic artery](http://purl.obolibrary.org/obo/UBERON_8410022) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)
+
+
+### left colic vein `http://purl.obolibrary.org/obo/UBERON_8410017`
+#### Removed
+- [left colic vein](http://purl.obolibrary.org/obo/UBERON_8410017) EquivalentTo [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215))
+
+- [left colic vein](http://purl.obolibrary.org/obo/UBERON_8410017) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)
+
+#### Added
+- [left colic vein](http://purl.obolibrary.org/obo/UBERON_8410017) EquivalentTo [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [inferior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001215)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158))
+
+- [left colic vein](http://purl.obolibrary.org/obo/UBERON_8410017) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158)
+
+
+### left coronary artery `http://purl.obolibrary.org/obo/UBERON_0001626`
+#### Removed
+- [left coronary artery](http://purl.obolibrary.org/obo/UBERON_0001626) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [heart](http://purl.obolibrary.org/obo/UBERON_0000948)
+
+#### Added
+- [left coronary artery](http://purl.obolibrary.org/obo/UBERON_0001626) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [heart](http://purl.obolibrary.org/obo/UBERON_0000948)
+
+
+### left gastric artery `http://purl.obolibrary.org/obo/UBERON_0001192`
+#### Removed
+- [left gastric artery](http://purl.obolibrary.org/obo/UBERON_0001192) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [stomach](http://purl.obolibrary.org/obo/UBERON_0000945)
+
+#### Added
+- [left gastric artery](http://purl.obolibrary.org/obo/UBERON_0001192) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [stomach](http://purl.obolibrary.org/obo/UBERON_0000945)
+
+
+### left ovarian vein `http://purl.obolibrary.org/obo/UBERON_0039857`
+#### Removed
+- [left ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039857) EquivalentTo [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [left ovary](http://purl.obolibrary.org/obo/UBERON_0002119))
+
+- [left ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039857) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [left ovary](http://purl.obolibrary.org/obo/UBERON_0002119)
+
+#### Added
+- [left ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039857) EquivalentTo [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [left ovary](http://purl.obolibrary.org/obo/UBERON_0002119))
+
+- [left ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039857) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [left ovary](http://purl.obolibrary.org/obo/UBERON_0002119)
+
+
+### left ovary `http://purl.obolibrary.org/obo/UBERON_0002119`
+
+#### Added
+- [left ovary](http://purl.obolibrary.org/obo/UBERON_0002119) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/ovary-female-left/v1.3/assets/3d-vh-f-ovary-l.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### left pulmonary artery `http://purl.obolibrary.org/obo/UBERON_0001652`
+#### Removed
+- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [left lung](http://purl.obolibrary.org/obo/UBERON_0002168))
+
+- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [left lung](http://purl.obolibrary.org/obo/UBERON_0002168)
+
+#### Added
+- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [left lung](http://purl.obolibrary.org/obo/UBERON_0002168))
+
+- [left pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001652) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [left lung](http://purl.obolibrary.org/obo/UBERON_0002168)
+
+
+### left pulmonary vein `http://purl.obolibrary.org/obo/UBERON_0009030`
+#### Removed
+- [left pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0009030) EquivalentTo [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [left lung](http://purl.obolibrary.org/obo/UBERON_0002168))
+
+- [left pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0009030) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [left lung](http://purl.obolibrary.org/obo/UBERON_0002168)
+
+#### Added
+- [left pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0009030) EquivalentTo [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [left lung](http://purl.obolibrary.org/obo/UBERON_0002168))
+
+- [left pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0009030) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [left lung](http://purl.obolibrary.org/obo/UBERON_0002168)
+
+
+### left renal artery `http://purl.obolibrary.org/obo/UBERON_0001186`
+#### Removed
+- [left renal artery](http://purl.obolibrary.org/obo/UBERON_0001186) EquivalentTo [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538))
+
+- [left renal artery](http://purl.obolibrary.org/obo/UBERON_0001186) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538)
+
+#### Added
+- [left renal artery](http://purl.obolibrary.org/obo/UBERON_0001186) EquivalentTo [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538))
+
+- [left renal artery](http://purl.obolibrary.org/obo/UBERON_0001186) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538)
+
+
+### left renal vein `http://purl.obolibrary.org/obo/UBERON_0001142`
+#### Removed
+- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) EquivalentTo [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538))
+
+- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538)
+
+#### Added
+- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) EquivalentTo [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538))
+
+- [left renal vein](http://purl.obolibrary.org/obo/UBERON_0001142) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [left kidney](http://purl.obolibrary.org/obo/UBERON_0004538)
+
+
+### left testicular artery `http://purl.obolibrary.org/obo/UBERON_0001189`
+#### Removed
+- [left testicular artery](http://purl.obolibrary.org/obo/UBERON_0001189) EquivalentTo [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [left testis](http://purl.obolibrary.org/obo/UBERON_0004533))
+
+- [left testicular artery](http://purl.obolibrary.org/obo/UBERON_0001189) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [left ureter](http://purl.obolibrary.org/obo/UBERON_0001223)
+
+- [left testicular artery](http://purl.obolibrary.org/obo/UBERON_0001189) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [left testis](http://purl.obolibrary.org/obo/UBERON_0004533)
+
+#### Added
+- [left testicular artery](http://purl.obolibrary.org/obo/UBERON_0001189) EquivalentTo [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [left testis](http://purl.obolibrary.org/obo/UBERON_0004533))
+
+- [left testicular artery](http://purl.obolibrary.org/obo/UBERON_0001189) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [left ureter](http://purl.obolibrary.org/obo/UBERON_0001223)
+
+- [left testicular artery](http://purl.obolibrary.org/obo/UBERON_0001189) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [left testis](http://purl.obolibrary.org/obo/UBERON_0004533)
+
+
+### left testicular vein `http://purl.obolibrary.org/obo/UBERON_0000443`
+#### Removed
+- [left testicular vein](http://purl.obolibrary.org/obo/UBERON_0000443) EquivalentTo [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [left testis](http://purl.obolibrary.org/obo/UBERON_0004533))
+
+- [left testicular vein](http://purl.obolibrary.org/obo/UBERON_0000443) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [left testis](http://purl.obolibrary.org/obo/UBERON_0004533)
+
+#### Added
+- [left testicular vein](http://purl.obolibrary.org/obo/UBERON_0000443) EquivalentTo [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [left testis](http://purl.obolibrary.org/obo/UBERON_0004533))
+
+- [left testicular vein](http://purl.obolibrary.org/obo/UBERON_0000443) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [left testis](http://purl.obolibrary.org/obo/UBERON_0004533)
+
+
+### life cycle `http://purl.obolibrary.org/obo/UBERON_0000104`
+#### Removed
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000001"
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000001"
+
+#### Added
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DpseDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CfamDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DsimDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:FcatDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OcunDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:AcarDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CporDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:EcabDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OanaDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:BtauDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000001"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### life cycle stage `http://purl.obolibrary.org/obo/UBERON_0000105`
+#### Removed
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OlatDv:0000010"
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000000"
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000000"
+
+#### Added
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:BtauDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CporDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OanaDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CfamDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:FcatDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:EcabDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DsimDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DpseDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:AcarDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OcunDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000000"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### lingual artery `http://purl.obolibrary.org/obo/UBERON_0001610`
+#### Removed
+- [lingual artery](http://purl.obolibrary.org/obo/UBERON_0001610) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [tongue](http://purl.obolibrary.org/obo/UBERON_0001723))
+
+- [lingual artery](http://purl.obolibrary.org/obo/UBERON_0001610) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [tongue](http://purl.obolibrary.org/obo/UBERON_0001723)
+
+#### Added
+- [lingual artery](http://purl.obolibrary.org/obo/UBERON_0001610) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [tongue](http://purl.obolibrary.org/obo/UBERON_0001723))
+
+- [lingual artery](http://purl.obolibrary.org/obo/UBERON_0001610) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [tongue](http://purl.obolibrary.org/obo/UBERON_0001723)
+
+
+### lymph node T cell domain `http://purl.obolibrary.org/obo/UBERON_0010417`
+#### Removed
+- [lymph node T cell domain](http://purl.obolibrary.org/obo/UBERON_0010417) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [lymph node T cell domain](http://purl.obolibrary.org/obo/UBERON_0010417) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+#### Added
+- [lymph node T cell domain](http://purl.obolibrary.org/obo/UBERON_0010417) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [lymph node T cell domain](http://purl.obolibrary.org/obo/UBERON_0010417) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### lymph node artery `http://purl.obolibrary.org/obo/UBERON_8410034`
+#### Removed
+- [lymph node artery](http://purl.obolibrary.org/obo/UBERON_8410034) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029))
+
+- [lymph node artery](http://purl.obolibrary.org/obo/UBERON_8410034) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029)
+
+#### Added
+- [lymph node artery](http://purl.obolibrary.org/obo/UBERON_8410034) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029))
+
+- [lymph node artery](http://purl.obolibrary.org/obo/UBERON_8410034) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029)
+
+
+### lymph node follicle `http://purl.obolibrary.org/obo/UBERON_0010748`
+#### Removed
+- [lymph node follicle](http://purl.obolibrary.org/obo/UBERON_0010748) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [lymph node follicle](http://purl.obolibrary.org/obo/UBERON_0010748) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+#### Added
+- [lymph node follicle](http://purl.obolibrary.org/obo/UBERON_0010748) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [lymph node follicle](http://purl.obolibrary.org/obo/UBERON_0010748) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### lymph node vein `http://purl.obolibrary.org/obo/UBERON_8410033`
+#### Removed
+- [lymph node vein](http://purl.obolibrary.org/obo/UBERON_8410033) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029))
+
+- [lymph node vein](http://purl.obolibrary.org/obo/UBERON_8410033) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029)
+
+#### Added
+- [lymph node vein](http://purl.obolibrary.org/obo/UBERON_8410033) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029))
+
+- [lymph node vein](http://purl.obolibrary.org/obo/UBERON_8410033) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lymph node](http://purl.obolibrary.org/obo/UBERON_0000029)
+
+
+### lymph vasculature `http://purl.obolibrary.org/obo/UBERON_0004536`
+#### Removed
+- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+#### Added
+- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [lymph vasculature](http://purl.obolibrary.org/obo/UBERON_0004536) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### major salivary gland `http://purl.obolibrary.org/obo/UBERON_0001829`
+
+#### Added
+- [major salivary gland](http://purl.obolibrary.org/obo/UBERON_0001829) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [major salivary gland](http://purl.obolibrary.org/obo/UBERON_0001829) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### mandibular artery `http://purl.obolibrary.org/obo/UBERON_3010496`
+#### Removed
+- [mandibular artery](http://purl.obolibrary.org/obo/UBERON_3010496) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [roof of mouth](http://purl.obolibrary.org/obo/UBERON_0007375)
+
+#### Added
+- [mandibular artery](http://purl.obolibrary.org/obo/UBERON_3010496) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [roof of mouth](http://purl.obolibrary.org/obo/UBERON_0007375)
+
+
+### masseteric artery `http://purl.obolibrary.org/obo/UBERON_0013648`
+#### Removed
+- [masseteric artery](http://purl.obolibrary.org/obo/UBERON_0013648) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597))
+
+- [masseteric artery](http://purl.obolibrary.org/obo/UBERON_0013648) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597)
+
+#### Added
+- [masseteric artery](http://purl.obolibrary.org/obo/UBERON_0013648) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597))
+
+- [masseteric artery](http://purl.obolibrary.org/obo/UBERON_0013648) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597)
+
+
+### masseteric vein `http://purl.obolibrary.org/obo/UBERON_0001674`
+#### Removed
+- [masseteric vein](http://purl.obolibrary.org/obo/UBERON_0001674) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597))
+
+- [masseteric vein](http://purl.obolibrary.org/obo/UBERON_0001674) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597)
+
+#### Added
+- [masseteric vein](http://purl.obolibrary.org/obo/UBERON_0001674) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597))
+
+- [masseteric vein](http://purl.obolibrary.org/obo/UBERON_0001674) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597)
+
+
+### medial circumflex femoral artery `http://purl.obolibrary.org/obo/UBERON_0001356`
+#### Removed
+- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [neck of femur](http://purl.obolibrary.org/obo/UBERON_0007119))
+
+- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [neck of femur](http://purl.obolibrary.org/obo/UBERON_0007119)
+
+#### Added
+- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [neck of femur](http://purl.obolibrary.org/obo/UBERON_0007119))
+
+- [medial circumflex femoral artery](http://purl.obolibrary.org/obo/UBERON_0001356) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [neck of femur](http://purl.obolibrary.org/obo/UBERON_0007119)
+
+
+### median sacral artery `http://purl.obolibrary.org/obo/UBERON_0005464`
+#### Removed
+- [median sacral artery](http://purl.obolibrary.org/obo/UBERON_0005464) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159)
+
+- [median sacral artery](http://purl.obolibrary.org/obo/UBERON_0005464) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059)
+
+#### Added
+- [median sacral artery](http://purl.obolibrary.org/obo/UBERON_0005464) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [large intestine](http://purl.obolibrary.org/obo/UBERON_0000059)
+
+- [median sacral artery](http://purl.obolibrary.org/obo/UBERON_0005464) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159)
+
+
+### median ventricular nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910023`
+
+#### Added
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) [label](http://www.w3.org/2000/01/rdf-schema#label) "median ventricular nerve (sensu Cancer borealis)"
+
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "MVN (sensu Cancer borealis)"
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/0010-406X(70)90044-7"
+
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Most of the efferent fibers leaving the stomatogastric ganglion and leading to the gastric mill or pyloric stomach muscles run posteriorly in the dorsal median ventricular nerve. This nerve branches bilaterally into the right and left lateral ventricular nerves (LVN) which go to their respective sides of the stomach."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/0010-406X(70)90044-7"
+
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910023"
+
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- Class: [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023)
+
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [median ventricular nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910023) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+
+### medulla of lymph node `http://purl.obolibrary.org/obo/UBERON_0002007`
+#### Removed
+- [medulla of lymph node](http://purl.obolibrary.org/obo/UBERON_0002007) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [medulla of lymph node](http://purl.obolibrary.org/obo/UBERON_0002007) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+#### Added
+- [medulla of lymph node](http://purl.obolibrary.org/obo/UBERON_0002007) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [medulla of lymph node](http://purl.obolibrary.org/obo/UBERON_0002007) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### meningeal artery `http://purl.obolibrary.org/obo/UBERON_0003474`
+#### Removed
+- [meningeal artery](http://purl.obolibrary.org/obo/UBERON_0003474) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [meninx](http://purl.obolibrary.org/obo/UBERON_0002360))
+
+- [meningeal artery](http://purl.obolibrary.org/obo/UBERON_0003474) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [meninx](http://purl.obolibrary.org/obo/UBERON_0002360)
+
+#### Added
+- [meningeal artery](http://purl.obolibrary.org/obo/UBERON_0003474) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [meninx](http://purl.obolibrary.org/obo/UBERON_0002360))
+
+- [meningeal artery](http://purl.obolibrary.org/obo/UBERON_0003474) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [meninx](http://purl.obolibrary.org/obo/UBERON_0002360)
+
+
+### meningeal vein `http://purl.obolibrary.org/obo/UBERON_0018251`
+#### Removed
+- [meningeal vein](http://purl.obolibrary.org/obo/UBERON_0018251) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [meninx](http://purl.obolibrary.org/obo/UBERON_0002360))
+
+- [meningeal vein](http://purl.obolibrary.org/obo/UBERON_0018251) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [meninx](http://purl.obolibrary.org/obo/UBERON_0002360)
+
+#### Added
+- [meningeal vein](http://purl.obolibrary.org/obo/UBERON_0018251) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [meninx](http://purl.obolibrary.org/obo/UBERON_0002360))
+
+- [meningeal vein](http://purl.obolibrary.org/obo/UBERON_0018251) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [meninx](http://purl.obolibrary.org/obo/UBERON_0002360)
+
+
+### mental artery `http://purl.obolibrary.org/obo/UBERON_0001617`
+#### Removed
+- [mental artery](http://purl.obolibrary.org/obo/UBERON_0001617) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [chin](http://purl.obolibrary.org/obo/UBERON_0008199)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [inferior alveolar artery](http://purl.obolibrary.org/obo/UBERON_0014693))
+
+- [mental artery](http://purl.obolibrary.org/obo/UBERON_0001617) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [chin](http://purl.obolibrary.org/obo/UBERON_0008199)
+
+#### Added
+- [mental artery](http://purl.obolibrary.org/obo/UBERON_0001617) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [inferior alveolar artery](http://purl.obolibrary.org/obo/UBERON_0014693)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [chin](http://purl.obolibrary.org/obo/UBERON_0008199))
+
+- [mental artery](http://purl.obolibrary.org/obo/UBERON_0001617) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [chin](http://purl.obolibrary.org/obo/UBERON_0008199)
+
+
+### mesencephalic artery `http://purl.obolibrary.org/obo/UBERON_0001634`
+#### Removed
+- [mesencephalic artery](http://purl.obolibrary.org/obo/UBERON_0001634) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [midbrain](http://purl.obolibrary.org/obo/UBERON_0001891)
+
+#### Added
+- [mesencephalic artery](http://purl.obolibrary.org/obo/UBERON_0001634) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [midbrain](http://purl.obolibrary.org/obo/UBERON_0001891)
+
+
+### mesenteric artery `http://purl.obolibrary.org/obo/UBERON_0005616`
+#### Removed
+- [mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0005616) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [intestine](http://purl.obolibrary.org/obo/UBERON_0000160))
+
+- [mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0005616) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [intestine](http://purl.obolibrary.org/obo/UBERON_0000160)
+
+#### Added
+- [mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0005616) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [intestine](http://purl.obolibrary.org/obo/UBERON_0000160))
+
+- [mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0005616) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [intestine](http://purl.obolibrary.org/obo/UBERON_0000160)
+
+
+### mesenteric lymph node `http://purl.obolibrary.org/obo/UBERON_0002509`
+#### Removed
+- [mesenteric lymph node](http://purl.obolibrary.org/obo/UBERON_0002509) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.3/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [mesenteric lymph node](http://purl.obolibrary.org/obo/UBERON_0002509) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.3/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+#### Added
+- [mesenteric lymph node](http://purl.obolibrary.org/obo/UBERON_0002509) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+- [mesenteric lymph node](http://purl.obolibrary.org/obo/UBERON_0002509) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
+
+
+### mesenteric vein `http://purl.obolibrary.org/obo/UBERON_0005617`
+#### Removed
+- [mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0005617) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [intestine](http://purl.obolibrary.org/obo/UBERON_0000160))
+
+- [mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0005617) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [intestine](http://purl.obolibrary.org/obo/UBERON_0000160)
+
+#### Added
+- [mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0005617) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [intestine](http://purl.obolibrary.org/obo/UBERON_0000160))
+
+- [mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0005617) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [intestine](http://purl.obolibrary.org/obo/UBERON_0000160)
+
+
+### middle colic artery `http://purl.obolibrary.org/obo/UBERON_0001196`
+#### Removed
+- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182))
+
+- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)
+
+#### Added
+- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157))
+
+- [middle colic artery](http://purl.obolibrary.org/obo/UBERON_0001196) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)
+
+
+### middle colic vein `http://purl.obolibrary.org/obo/UBERON_0001218`
+#### Removed
+- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) EquivalentTo [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138))
+
+- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)
+
+#### Added
+- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) EquivalentTo [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157))
+
+- [middle colic vein](http://purl.obolibrary.org/obo/UBERON_0001218) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157)
+
+
+### middle temporal vein `http://purl.obolibrary.org/obo/UBERON_0001658`
+#### Removed
+- [middle temporal vein](http://purl.obolibrary.org/obo/UBERON_0001658) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [orbital region](http://purl.obolibrary.org/obo/UBERON_0004088)
+
+#### Added
+- [middle temporal vein](http://purl.obolibrary.org/obo/UBERON_0001658) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [orbital region](http://purl.obolibrary.org/obo/UBERON_0004088)
+
+
+### middle vesical artery `http://purl.obolibrary.org/obo/UBERON_0035640`
+#### Removed
+- [middle vesical artery](http://purl.obolibrary.org/obo/UBERON_0035640) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0000998)
+
+#### Added
+- [middle vesical artery](http://purl.obolibrary.org/obo/UBERON_0035640) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [seminal vesicle](http://purl.obolibrary.org/obo/UBERON_0000998)
+
+
+### minor salivary gland `http://purl.obolibrary.org/obo/UBERON_0001830`
+
+#### Added
+- [minor salivary gland](http://purl.obolibrary.org/obo/UBERON_0001830) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [minor salivary gland](http://purl.obolibrary.org/obo/UBERON_0001830) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### moderator band `http://purl.obolibrary.org/obo/UBERON_8470002`
+
+#### Added
+- [moderator band](http://purl.obolibrary.org/obo/UBERON_8470002) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [moderator band](http://purl.obolibrary.org/obo/UBERON_8470002) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+
+### mouth `http://purl.obolibrary.org/obo/UBERON_0000165`
+
+#### Added
+- [mouth](http://purl.obolibrary.org/obo/UBERON_0000165) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [mouth](http://purl.obolibrary.org/obo/UBERON_0000165) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### mouth mucosa `http://purl.obolibrary.org/obo/UBERON_0003729`
+
+#### Added
+- [mouth mucosa](http://purl.obolibrary.org/obo/UBERON_0003729) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [mouth mucosa](http://purl.obolibrary.org/obo/UBERON_0003729) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+
+### muscular artery `http://purl.obolibrary.org/obo/UBERON_3010489`
+#### Removed
+- [muscular artery](http://purl.obolibrary.org/obo/UBERON_3010489) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [rectus cervicis](http://purl.obolibrary.org/obo/UBERON_3010654)
+
+#### Added
+- [muscular artery](http://purl.obolibrary.org/obo/UBERON_3010489) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [rectus cervicis](http://purl.obolibrary.org/obo/UBERON_3010654)
+
+
+### musculo-phrenic artery `http://purl.obolibrary.org/obo/UBERON_0006632`
+#### Removed
+- [musculo-phrenic artery](http://purl.obolibrary.org/obo/UBERON_0006632) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456))
+
+#### Added
+- [musculo-phrenic artery](http://purl.obolibrary.org/obo/UBERON_0006632) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [internal thoracic artery](http://purl.obolibrary.org/obo/UBERON_0002456)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103))
+
+
+### musculo-phrenic vein `http://purl.obolibrary.org/obo/UBERON_0006662`
+#### Removed
+- [musculo-phrenic vein](http://purl.obolibrary.org/obo/UBERON_0006662) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103)) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [internal thoracic vein](http://purl.obolibrary.org/obo/UBERON_0001589))
+
+#### Added
+- [musculo-phrenic vein](http://purl.obolibrary.org/obo/UBERON_0006662) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [internal thoracic vein](http://purl.obolibrary.org/obo/UBERON_0001589)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103))
+
+
+### nasopharynx `http://purl.obolibrary.org/obo/UBERON_0001728`
+
+#### Added
+- [nasopharynx](http://purl.obolibrary.org/obo/UBERON_0001728) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [nasopharynx](http://purl.obolibrary.org/obo/UBERON_0001728) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+
+### neonate stage `http://purl.obolibrary.org/obo/UBERON_0007221`
+#### Removed
+- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000082"
+
+- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000096"
+
+#### Added
+- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000036"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000046"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000013"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000009"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000262"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### nervous system `http://purl.obolibrary.org/obo/UBERON_0001016`
+
+#### Added
+- [nervous system](http://purl.obolibrary.org/obo/UBERON_0001016) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [nervous system](http://purl.obolibrary.org/obo/UBERON_0001016) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### neuron projection bundle connecting eye with brain `http://purl.obolibrary.org/obo/UBERON_0004904`
+#### Removed
+- [neuron projection bundle connecting eye with brain](http://purl.obolibrary.org/obo/UBERON_0004904) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [neuron projection bundle connecting eye with brain](http://purl.obolibrary.org/obo/UBERON_0004904) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+
+### neurula stage `http://purl.obolibrary.org/obo/UBERON_0000110`
+#### Removed
+- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000012"
+
+- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000017"
+
+#### Added
+- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000027"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000091"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000093"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000017"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000012"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### nursing stage `http://purl.obolibrary.org/obo/UBERON_0018685`
+
+#### Added
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000056"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000032"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000138"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000260"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### nutrient foramen artery `http://purl.obolibrary.org/obo/UBERON_0010176`
+#### Removed
+- [nutrient foramen artery](http://purl.obolibrary.org/obo/UBERON_0010176) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [bone element](http://purl.obolibrary.org/obo/UBERON_0001474)
+
+#### Added
+- [nutrient foramen artery](http://purl.obolibrary.org/obo/UBERON_0010176) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [bone element](http://purl.obolibrary.org/obo/UBERON_0001474)
+
+
+### nutrient foramen vein `http://purl.obolibrary.org/obo/UBERON_0010175`
+#### Removed
+- [nutrient foramen vein](http://purl.obolibrary.org/obo/UBERON_0010175) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [bone element](http://purl.obolibrary.org/obo/UBERON_0001474)
+
+#### Added
+- [nutrient foramen vein](http://purl.obolibrary.org/obo/UBERON_0010175) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [bone element](http://purl.obolibrary.org/obo/UBERON_0001474)
+
+
+### obsolete median fin skeleton `http://purl.obolibrary.org/obo/UBERON_0002543`
+#### Removed
+- [obsolete median fin skeleton](http://purl.obolibrary.org/obo/UBERON_0002543) [consider](http://www.geneontology.org/formats/oboInOwl#consider) [EFO_0000950](http://www.ebi.ac.uk/efo/EFO_0000950)
+
+#### Added
+- [obsolete median fin skeleton](http://purl.obolibrary.org/obo/UBERON_0002543) [consider](http://www.geneontology.org/formats/oboInOwl#consider) [EFO_0000950](http://purl.obolibrary.org/obo/EFO_0000950)
+
+
+### obsolete regional part of gustatory epithelium `http://purl.obolibrary.org/obo/UBERON_0025182`
+#### Removed
+- [obsolete regional part of gustatory epithelium](http://purl.obolibrary.org/obo/UBERON_0025182) [consider](http://www.geneontology.org/formats/oboInOwl#consider) [nifext_13](http://uri.neuinfo.org/nif/nifstd/nifext_13)
+
+#### Added
+- [obsolete regional part of gustatory epithelium](http://purl.obolibrary.org/obo/UBERON_0025182) [consider](http://www.geneontology.org/formats/oboInOwl#consider) [NIFEXT_13](http://purl.obolibrary.org/obo/NIFEXT_13)
+
+
+### obsolete tuber `http://purl.obolibrary.org/obo/UBERON_0000380`
+#### Removed
+- [obsolete tuber](http://purl.obolibrary.org/obo/UBERON_0000380) [consider](http://www.geneontology.org/formats/oboInOwl#consider) [EFO_0001015](http://www.ebi.ac.uk/efo/EFO_0001015)
+
+#### Added
+- [obsolete tuber](http://purl.obolibrary.org/obo/UBERON_0000380) [consider](http://www.geneontology.org/formats/oboInOwl#consider) [EFO_0001015](http://purl.obolibrary.org/obo/EFO_0001015)
+
+
+### occipital artery `http://purl.obolibrary.org/obo/UBERON_0001613`
+#### Removed
+- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [scalp](http://purl.obolibrary.org/obo/UBERON_0000403)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [muscle of neck](http://purl.obolibrary.org/obo/UBERON_0002377)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070))
+
+- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [scalp](http://purl.obolibrary.org/obo/UBERON_0000403)
+
+- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [muscle of neck](http://purl.obolibrary.org/obo/UBERON_0002377)
+
+#### Added
+- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [external carotid artery](http://purl.obolibrary.org/obo/UBERON_0001070)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [scalp](http://purl.obolibrary.org/obo/UBERON_0000403)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [muscle of neck](http://purl.obolibrary.org/obo/UBERON_0002377))
+
+- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [scalp](http://purl.obolibrary.org/obo/UBERON_0000403)
+
+- [occipital artery](http://purl.obolibrary.org/obo/UBERON_0001613) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [muscle of neck](http://purl.obolibrary.org/obo/UBERON_0002377)
+
+
+### ophthalmotemporal branch of external ophthalmic artery `http://purl.obolibrary.org/obo/UBERON_0015158`
+#### Removed
+- [ophthalmotemporal branch of external ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0015158) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [Harderian gland](http://purl.obolibrary.org/obo/UBERON_0004187)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "PMID:7559104"
+
+#### Added
+- [ophthalmotemporal branch of external ophthalmic artery](http://purl.obolibrary.org/obo/UBERON_0015158) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [Harderian gland](http://purl.obolibrary.org/obo/UBERON_0004187)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "PMID:7559104"
+
+
+### optic artery `http://purl.obolibrary.org/obo/UBERON_2005044`
+#### Removed
+- [optic artery](http://purl.obolibrary.org/obo/UBERON_2005044) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000019)
+
+#### Added
+- [optic artery](http://purl.obolibrary.org/obo/UBERON_2005044) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000019)
+
+
+### oral gland `http://purl.obolibrary.org/obo/UBERON_0010047`
+
+#### Added
+- [oral gland](http://purl.obolibrary.org/obo/UBERON_0010047) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+
+- [oral gland](http://purl.obolibrary.org/obo/UBERON_0010047) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+
+### organogenesis stage `http://purl.obolibrary.org/obo/UBERON_0000111`
+#### Removed
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000018"
+
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000015"
+
+#### Added
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000094"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000086"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000018"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000028"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000015"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000055"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000022"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### ovarian artery `http://purl.obolibrary.org/obo/UBERON_0001190`
+#### Removed
+- [ovarian artery](http://purl.obolibrary.org/obo/UBERON_0001190) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992))
-### Ontology imports
+- [ovarian artery](http://purl.obolibrary.org/obo/UBERON_0001190) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992)
+#### Added
+- [ovarian artery](http://purl.obolibrary.org/obo/UBERON_0001190) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992))
+- [ovarian artery](http://purl.obolibrary.org/obo/UBERON_0001190) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992)
-### Ontology annotations
+
+### ovarian vein `http://purl.obolibrary.org/obo/UBERON_0001145`
#### Removed
-- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2024-09-03"
+- [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992))
+
+- [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992)
#### Added
-- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2024-11-25"
+- [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992))
+
+- [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992)
-### 1st arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010341`
+### oviduct artery `http://purl.obolibrary.org/obo/UBERON_3010503`
#### Removed
-- [1st arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010341) SubClassOf [head mesenchyme from mesoderm](http://purl.obolibrary.org/obo/UBERON_0006904)
+- [oviduct artery](http://purl.obolibrary.org/obo/UBERON_3010503) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [oviduct](http://purl.obolibrary.org/obo/UBERON_0000993)
+#### Added
+- [oviduct artery](http://purl.obolibrary.org/obo/UBERON_3010503) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [oviduct](http://purl.obolibrary.org/obo/UBERON_0000993)
-### 2nd arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010343`
+### palpebral artery `http://purl.obolibrary.org/obo/UBERON_0014770`
#### Removed
-- [2nd arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010343) SubClassOf [head mesenchyme from mesoderm](http://purl.obolibrary.org/obo/UBERON_0006904)
+- [palpebral artery](http://purl.obolibrary.org/obo/UBERON_0014770) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711))
+
+- [palpebral artery](http://purl.obolibrary.org/obo/UBERON_0014770) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711)
+
+#### Added
+- [palpebral artery](http://purl.obolibrary.org/obo/UBERON_0014770) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711))
+- [palpebral artery](http://purl.obolibrary.org/obo/UBERON_0014770) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711)
-### 3rd arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010344`
+### palpebral vein `http://purl.obolibrary.org/obo/UBERON_0014769`
#### Removed
-- [3rd arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010344) SubClassOf [head mesenchyme from mesoderm](http://purl.obolibrary.org/obo/UBERON_0006904)
+- [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711))
+- [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711)
+#### Added
+- [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711))
+
+- [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [eyelid](http://purl.obolibrary.org/obo/UBERON_0001711)
-### 4th arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010345`
+
+### pancreatic artery `http://purl.obolibrary.org/obo/UBERON_0039261`
#### Removed
-- [4th arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010345) SubClassOf [head mesenchyme from mesoderm](http://purl.obolibrary.org/obo/UBERON_0006904)
+- [pancreatic artery](http://purl.obolibrary.org/obo/UBERON_0039261) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264))
+
+- [pancreatic artery](http://purl.obolibrary.org/obo/UBERON_0039261) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264)
+#### Added
+- [pancreatic artery](http://purl.obolibrary.org/obo/UBERON_0039261) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264))
+
+- [pancreatic artery](http://purl.obolibrary.org/obo/UBERON_0039261) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pancreas](http://purl.obolibrary.org/obo/UBERON_0001264)
-### 6th arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010347`
+### parathyroid epithelium `http://purl.obolibrary.org/obo/UBERON_0011197`
#### Removed
-- [6th arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010347) SubClassOf [head mesenchyme from mesoderm](http://purl.obolibrary.org/obo/UBERON_0006904)
+- [parathyroid epithelium](http://purl.obolibrary.org/obo/UBERON_0011197) SubClassOf [glandular epithelium](http://purl.obolibrary.org/obo/UBERON_0006799)
-### GCIs
+### parotid vein `http://purl.obolibrary.org/obo/UBERON_0035662`
#### Removed
-- [hyaloid vessel](http://purl.obolibrary.org/obo/UBERON_0005492) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [NCBITaxon_40674](http://purl.obolibrary.org/obo/NCBITaxon_40674)) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [embryo](http://purl.obolibrary.org/obo/UBERON_0000922)
+- [parotid vein](http://purl.obolibrary.org/obo/UBERON_0035662) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831))
+
+- [parotid vein](http://purl.obolibrary.org/obo/UBERON_0035662) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831)
#### Added
-- ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [embryo](http://purl.obolibrary.org/obo/UBERON_0000922)) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811)) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003)
+- [parotid vein](http://purl.obolibrary.org/obo/UBERON_0035662) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831))
+- [parotid vein](http://purl.obolibrary.org/obo/UBERON_0035662) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831)
-### Peyer's patch epithelium `http://purl.obolibrary.org/obo/UBERON_0004693`
+
+### pelvic vein `http://purl.obolibrary.org/obo/UBERON_0036268`
#### Removed
-- [Peyer's patch epithelium](http://purl.obolibrary.org/obo/UBERON_0004693) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The specialized epithelium of the Peyer's patch."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0002388"
+- [pelvic vein](http://purl.obolibrary.org/obo/UBERON_0036268) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [pelvic region of trunk](http://purl.obolibrary.org/obo/UBERON_0002355))
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:0-8153-1691-7"
+- [pelvic vein](http://purl.obolibrary.org/obo/UBERON_0036268) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [pelvic region of trunk](http://purl.obolibrary.org/obo/UBERON_0002355)
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MGI:cwg"
+#### Added
+- [pelvic vein](http://purl.obolibrary.org/obo/UBERON_0036268) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [pelvic region of trunk](http://purl.obolibrary.org/obo/UBERON_0002355))
-- [Peyer's patch epithelium](http://purl.obolibrary.org/obo/UBERON_0004693) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "Peyer's patch epithelium"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MA:0000731"
+- [pelvic vein](http://purl.obolibrary.org/obo/UBERON_0036268) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [pelvic region of trunk](http://purl.obolibrary.org/obo/UBERON_0002355)
-#### Added
-- [Peyer's patch epithelium](http://purl.obolibrary.org/obo/UBERON_0004693) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The specialized epithelial layer covering the entire Peyer's patch, including both the follicular and interfollicular areas and forming part of the gut-associated lymphoid tissue."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0002388"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:0-8153-1691-7"
+### penicillar arteriole `http://purl.obolibrary.org/obo/UBERON_0013132`
+#### Removed
+- [penicillar arteriole](http://purl.obolibrary.org/obo/UBERON_0013132) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637)
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MGI:cwg"
+- [penicillar arteriole](http://purl.obolibrary.org/obo/UBERON_0013132) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [red pulp of spleen](http://purl.obolibrary.org/obo/UBERON_0001250)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia:Trabecular_arteries"
-- [Peyer's patch epithelium](http://purl.obolibrary.org/obo/UBERON_0004693) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "Peyer's patch epithelium"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MA:0000731"
+#### Added
+- [penicillar arteriole](http://purl.obolibrary.org/obo/UBERON_0013132) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [red pulp of spleen](http://purl.obolibrary.org/obo/UBERON_0001250)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia:Trabecular_arteries"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:31813624"
+### penile bulb artery `http://purl.obolibrary.org/obo/UBERON_0008311`
+#### Removed
+- [penile bulb artery](http://purl.obolibrary.org/obo/UBERON_0008311) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [bulb of penis](http://purl.obolibrary.org/obo/UBERON_0013128))
-### accessory meningeal artery `http://purl.obolibrary.org/obo/UBERON_8600099`
+- [penile bulb artery](http://purl.obolibrary.org/obo/UBERON_0008311) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [bulb of penis](http://purl.obolibrary.org/obo/UBERON_0013128)
#### Added
-- [accessory meningeal artery](http://purl.obolibrary.org/obo/UBERON_8600099) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [penile bulb artery](http://purl.obolibrary.org/obo/UBERON_0008311) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [bulb of penis](http://purl.obolibrary.org/obo/UBERON_0013128))
-- [accessory meningeal artery](http://purl.obolibrary.org/obo/UBERON_8600099) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [penile bulb artery](http://purl.obolibrary.org/obo/UBERON_0008311) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [bulb of penis](http://purl.obolibrary.org/obo/UBERON_0013128)
-### afferent filamental artery `http://purl.obolibrary.org/obo/UBERON_2005012`
+### penile bulb vein `http://purl.obolibrary.org/obo/UBERON_0039376`
#### Removed
-- [afferent filamental artery](http://purl.obolibrary.org/obo/UBERON_2005012) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [penile bulb vein](http://purl.obolibrary.org/obo/UBERON_0039376) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [bulb of penis](http://purl.obolibrary.org/obo/UBERON_0013128))
+
+- [penile bulb vein](http://purl.obolibrary.org/obo/UBERON_0039376) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [bulb of penis](http://purl.obolibrary.org/obo/UBERON_0013128)
+
+#### Added
+- [penile bulb vein](http://purl.obolibrary.org/obo/UBERON_0039376) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [bulb of penis](http://purl.obolibrary.org/obo/UBERON_0013128))
+- [penile bulb vein](http://purl.obolibrary.org/obo/UBERON_0039376) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [bulb of penis](http://purl.obolibrary.org/obo/UBERON_0013128)
-### afferent lamellar arteriole `http://purl.obolibrary.org/obo/UBERON_2005015`
+### peroneal artery `http://purl.obolibrary.org/obo/UBERON_0001540`
#### Removed
-- [afferent lamellar arteriole](http://purl.obolibrary.org/obo/UBERON_2005015) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [peroneal artery](http://purl.obolibrary.org/obo/UBERON_0001540) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [hindlimb](http://purl.obolibrary.org/obo/UBERON_0002103)
+#### Added
+- [peroneal artery](http://purl.obolibrary.org/obo/UBERON_0001540) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [hindlimb](http://purl.obolibrary.org/obo/UBERON_0002103)
-### afferent portion of pharyngeal arch artery `http://purl.obolibrary.org/obo/UBERON_2000716`
+### phrenic artery `http://purl.obolibrary.org/obo/UBERON_0002057`
#### Removed
-- [afferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000716) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [phrenic artery](http://purl.obolibrary.org/obo/UBERON_0002057) EquivalentTo [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103))
+
+- [phrenic artery](http://purl.obolibrary.org/obo/UBERON_0002057) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103)
+#### Added
+- [phrenic artery](http://purl.obolibrary.org/obo/UBERON_0002057) EquivalentTo [systemic artery](http://purl.obolibrary.org/obo/UBERON_0004573) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103))
+
+- [phrenic artery](http://purl.obolibrary.org/obo/UBERON_0002057) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103)
-### anterior internal vertebral venous plexus `http://purl.obolibrary.org/obo/UBERON_8600103`
+### phrenic vein `http://purl.obolibrary.org/obo/UBERON_0012193`
+#### Removed
+- [phrenic vein](http://purl.obolibrary.org/obo/UBERON_0012193) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103))
+
+- [phrenic vein](http://purl.obolibrary.org/obo/UBERON_0012193) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103)
#### Added
-- [anterior internal vertebral venous plexus](http://purl.obolibrary.org/obo/UBERON_8600103) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [phrenic vein](http://purl.obolibrary.org/obo/UBERON_0012193) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103))
-- [anterior internal vertebral venous plexus](http://purl.obolibrary.org/obo/UBERON_8600103) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [phrenic vein](http://purl.obolibrary.org/obo/UBERON_0012193) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [diaphragm](http://purl.obolibrary.org/obo/UBERON_0001103)
-### antimesosalpinx `http://purl.obolibrary.org/obo/UBERON_8600117`
+### post-embryonic stage `http://purl.obolibrary.org/obo/UBERON_0000092`
#### Added
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8600117"
+- [post-embryonic stage](http://purl.obolibrary.org/obo/UBERON_0000092) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000038"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "anti-mesosalpinx"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1101/2020.08.23.263772"
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [label](http://www.w3.org/2000/01/rdf-schema#label) "antimesosalpinx"
+### post-juvenile adult stage `http://purl.obolibrary.org/obo/UBERON_0000113`
+#### Removed
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000110"
+
+#### Added
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000042"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [date](http://purl.org/dc/terms/date) "2024-11-14T09:59:53Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:FcatDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-6677-8489](https://orcid.org/0000-0001-6677-8489)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CfamDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-7655-4833](https://orcid.org/0000-0001-7655-4833)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OcunDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "posterior free edge of mesosalpinx"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0001-7655-4833"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000011"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "posterior free border of mesosalpinx"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://vanat.ahc.umn.edu/ungDissect/Lab17/Lab17.html"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000016"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A posterior free border of a mesosalpinx."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://vanat.ahc.umn.edu/ungDissect/Lab17/Lab17.html"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- Class: [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:BtauDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mesosalpinx](http://purl.obolibrary.org/obo/UBERON_0012331)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000021"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [antimesosalpinx](http://purl.obolibrary.org/obo/UBERON_8600117) SubClassOf [mesentery](http://purl.obolibrary.org/obo/UBERON_0002095)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000110"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000015"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-### aorta-gonad-mesonephros `http://purl.obolibrary.org/obo/UBERON_8700000`
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000258"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-#### Added
-- [aorta-gonad-mesonephros](http://purl.obolibrary.org/obo/UBERON_8700000) [date](http://purl.org/dc/terms/date) "2024-10-25T08:42:34Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OanaDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [aorta-gonad-mesonephros](http://purl.obolibrary.org/obo/UBERON_8700000) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [aorta-gonad-mesonephros](http://purl.obolibrary.org/obo/UBERON_8700000) [contributor](http://purl.org/dc/terms/contributor) [0009-0005-7919-4905](https://orcid.org/0009-0005-7919-4905)
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CporDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [aorta-gonad-mesonephros](http://purl.obolibrary.org/obo/UBERON_8700000) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A transient organ in the developing embryo composed of the dorsal aorta, developing gonads, and embryonic kidney. This structure is located in the embryonic mesoderm and serves as the primary site for the generation of definitive hematopoietic stem cells."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:25686881"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:AcarDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:25749005"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:31813624"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000006"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [aorta-gonad-mesonephros](http://purl.obolibrary.org/obo/UBERON_8700000) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8700000"
+- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:EcabDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [aorta-gonad-mesonephros](http://purl.obolibrary.org/obo/UBERON_8700000) [label](http://www.w3.org/2000/01/rdf-schema#label) "aorta-gonad-mesonephros"
-- Class: [aorta-gonad-mesonephros](http://purl.obolibrary.org/obo/UBERON_8700000)
+### posterior auricular artery `http://purl.obolibrary.org/obo/UBERON_0014694`
+#### Removed
+- [posterior auricular artery](http://purl.obolibrary.org/obo/UBERON_0014694) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pinna](http://purl.obolibrary.org/obo/UBERON_0001757)
-- [aorta-gonad-mesonephros](http://purl.obolibrary.org/obo/UBERON_8700000) SubClassOf [embryonic structure](http://purl.obolibrary.org/obo/UBERON_0002050)
+#### Added
+- [posterior auricular artery](http://purl.obolibrary.org/obo/UBERON_0014694) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pinna](http://purl.obolibrary.org/obo/UBERON_0001757)
-### arterial system `http://purl.obolibrary.org/obo/UBERON_0004572`
+### posterior cerebral artery `http://purl.obolibrary.org/obo/UBERON_0001636`
#### Removed
-- [arterial system](http://purl.obolibrary.org/obo/UBERON_0004572) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [posterior cerebral artery](http://purl.obolibrary.org/obo/UBERON_0001636) EquivalentTo [cerebral artery](http://purl.obolibrary.org/obo/UBERON_0004449) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [occipital lobe](http://purl.obolibrary.org/obo/UBERON_0002021)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [basilar artery](http://purl.obolibrary.org/obo/UBERON_0001633))
-- [arterial system](http://purl.obolibrary.org/obo/UBERON_0004572) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [posterior cerebral artery](http://purl.obolibrary.org/obo/UBERON_0001636) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [occipital lobe](http://purl.obolibrary.org/obo/UBERON_0002021)
+
+#### Added
+- [posterior cerebral artery](http://purl.obolibrary.org/obo/UBERON_0001636) EquivalentTo [cerebral artery](http://purl.obolibrary.org/obo/UBERON_0004449) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [basilar artery](http://purl.obolibrary.org/obo/UBERON_0001633)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [occipital lobe](http://purl.obolibrary.org/obo/UBERON_0002021))
+- [posterior cerebral artery](http://purl.obolibrary.org/obo/UBERON_0001636) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [occipital lobe](http://purl.obolibrary.org/obo/UBERON_0002021)
-### artery of pterygoid canal `http://purl.obolibrary.org/obo/UBERON_8600100`
+### prime adult stage `http://purl.obolibrary.org/obo/UBERON_0018241`
#### Added
-- [artery of pterygoid canal](http://purl.obolibrary.org/obo/UBERON_8600100) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000017"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [artery of pterygoid canal](http://purl.obolibrary.org/obo/UBERON_8600100) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000059"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CfamDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-### ascending palatine artery `http://purl.obolibrary.org/obo/UBERON_8600095`
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000022"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-#### Added
-- [ascending palatine artery](http://purl.obolibrary.org/obo/UBERON_8600095) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OcunDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [ascending palatine artery](http://purl.obolibrary.org/obo/UBERON_8600095) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:BtauDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OanaDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-### ascending pharyngeal artery `http://purl.obolibrary.org/obo/UBERON_8600078`
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000077"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-#### Added
-- [ascending pharyngeal artery](http://purl.obolibrary.org/obo/UBERON_8600078) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [ascending pharyngeal artery](http://purl.obolibrary.org/obo/UBERON_8600078) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000226"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000136"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-### basivertebral vein `http://purl.obolibrary.org/obo/UBERON_8600066`
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-#### Added
-- [basivertebral vein](http://purl.obolibrary.org/obo/UBERON_8600066) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:EcabDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:AcarDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CporDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:FcatDv_0000005"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000007"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [basivertebral vein](http://purl.obolibrary.org/obo/UBERON_8600066) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000012"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### prostatic venule `http://purl.obolibrary.org/obo/UBERON_8600084`
+#### Removed
+- [prostatic venule](http://purl.obolibrary.org/obo/UBERON_8600084) SubClassOf [vein](http://purl.obolibrary.org/obo/UBERON_0001638)
-### bronchial venule `http://purl.obolibrary.org/obo/UBERON_8600067`
+
+### proximo-distal subdivision of respiratory tract `http://purl.obolibrary.org/obo/UBERON_0000072`
#### Added
-- [bronchial venule](http://purl.obolibrary.org/obo/UBERON_8600067) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [proximo-distal subdivision of respiratory tract](http://purl.obolibrary.org/obo/UBERON_0000072) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
-- [bronchial venule](http://purl.obolibrary.org/obo/UBERON_8600067) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [proximo-distal subdivision of respiratory tract](http://purl.obolibrary.org/obo/UBERON_0000072) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
-### central gray substance of midbrain `http://purl.obolibrary.org/obo/UBERON_0003040`
+### pulmonary arteriole `http://purl.obolibrary.org/obo/UBERON_8600077`
#### Removed
-- [central gray substance of midbrain](http://purl.obolibrary.org/obo/UBERON_0003040) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000518"
+- [pulmonary arteriole](http://purl.obolibrary.org/obo/UBERON_8600077) SubClassOf [respiratory system artery](http://purl.obolibrary.org/obo/UBERON_0003469)
-### circulatory system `http://purl.obolibrary.org/obo/UBERON_0001009`
+### pulmonary artery `http://purl.obolibrary.org/obo/UBERON_0002012`
#### Removed
-- [circulatory system](http://purl.obolibrary.org/obo/UBERON_0001009) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pulmonary vascular system](http://purl.obolibrary.org/obo/UBERON_0008886)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048))
+
+- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048)
+
+#### Added
+- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pulmonary vascular system](http://purl.obolibrary.org/obo/UBERON_0008886)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048))
-- [circulatory system](http://purl.obolibrary.org/obo/UBERON_0001009) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048)
+### pulmonary vein `http://purl.obolibrary.org/obo/UBERON_0002016`
+#### Removed
+- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048))
-### circumflex humeral vein `http://purl.obolibrary.org/obo/UBERON_8600073`
+- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048)
#### Added
-- [circumflex humeral vein](http://purl.obolibrary.org/obo/UBERON_8600073) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048))
-- [circumflex humeral vein](http://purl.obolibrary.org/obo/UBERON_8600073) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048)
-### coelemic cavity lumen `http://purl.obolibrary.org/obo/UBERON_0002323`
+### pulmonary venule `http://purl.obolibrary.org/obo/UBERON_8600024`
#### Removed
-- [coelemic cavity lumen](http://purl.obolibrary.org/obo/UBERON_0002323) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001438"
+- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [thoracic vein](http://purl.obolibrary.org/obo/UBERON_0005194)
-- [coelemic cavity lumen](http://purl.obolibrary.org/obo/UBERON_0002323) [external_definition](http://purl.obolibrary.org/obo/UBPROP_0000001) "Anatomical space, part of the trunk that contains the pericardial and pleuroperitoneal cavities[ZFA]."
- - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFIN:curator"
+- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [pulmonary capillary](http://purl.obolibrary.org/obo/UBERON_0016405)
+
+#### Added
+- [pulmonary venule](http://purl.obolibrary.org/obo/UBERON_8600024) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [pulmonary capillary](http://purl.obolibrary.org/obo/UBERON_0016405)
- - [date_retrieved](http://www.geneontology.org/formats/oboInOwl#date_retrieved) "2012-09-12"
- - [ontology](http://www.geneontology.org/formats/oboInOwl#ontology) "ZFA"
+### pupal stage `http://purl.obolibrary.org/obo/UBERON_0000070`
- - [external_class](http://www.geneontology.org/formats/oboInOwl#external_class) "ZFA:0001438"
+#### Added
+- [pupal stage](http://purl.obolibrary.org/obo/UBERON_0000070) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DpseDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+- [pupal stage](http://purl.obolibrary.org/obo/UBERON_0000070) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:DsimDv_0000004"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-### coelom `http://purl.obolibrary.org/obo/UBERON_0011997`
+### pyloric dilator nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910016`
#### Added
-- [coelom](http://purl.obolibrary.org/obo/UBERON_0011997) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001438"
+- [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+- [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016) [label](http://www.w3.org/2000/01/rdf-schema#label) "pyloric dilator nerve (sensu Cancer borealis)"
-### concurrent branch afferent branchial artery `http://purl.obolibrary.org/obo/UBERON_2005013`
-#### Removed
-- [concurrent branch afferent branchial artery](http://purl.obolibrary.org/obo/UBERON_2005013) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+- [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910016"
+- [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Innervates muscles that dilate valves of the pylorus motor neurons involved in filtering in crustaceans. Anterior burster neurons are intrinsic oscillators that are electrically coupled with pyloric dilator neurons, causing them to fire bursts of action potentials. Together these neurons inhibit lateral pyloric and pyloric neurons, forcing them to fire in alternation with the pyloric dilator neurons."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:2876096"
-### craniocervical region `http://purl.obolibrary.org/obo/UBERON_0007811`
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:17009928"
-#### Added
-- [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001114"
+- Class: [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016)
+
+- [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+- [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
-### deep cervical vein `http://purl.obolibrary.org/obo/UBERON_8600059`
+- [pyloric dilator nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910016) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+
+### pyloric nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910015`
#### Added
-- [deep cervical vein](http://purl.obolibrary.org/obo/UBERON_8600059) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015) [label](http://www.w3.org/2000/01/rdf-schema#label) "pyloric nerve (sensu Cancer borealis)"
-- [deep cervical vein](http://purl.obolibrary.org/obo/UBERON_8600059) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Innervates pyloric region of the stomach."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:2876096"
+- [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910015"
-### deep lingual artery `http://purl.obolibrary.org/obo/UBERON_8600097`
+- [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- Class: [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015)
+
+- [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
+
+- [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+- [pyloric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910015) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+
+### rectal artery `http://purl.obolibrary.org/obo/UBERON_0035039`
+#### Removed
+- [rectal artery](http://purl.obolibrary.org/obo/UBERON_0035039) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [rectum](http://purl.obolibrary.org/obo/UBERON_0001052))
+
+- [rectal artery](http://purl.obolibrary.org/obo/UBERON_0035039) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [rectum](http://purl.obolibrary.org/obo/UBERON_0001052)
#### Added
-- [deep lingual artery](http://purl.obolibrary.org/obo/UBERON_8600097) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [rectal artery](http://purl.obolibrary.org/obo/UBERON_0035039) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [rectum](http://purl.obolibrary.org/obo/UBERON_0001052))
-- [deep lingual artery](http://purl.obolibrary.org/obo/UBERON_8600097) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [rectal artery](http://purl.obolibrary.org/obo/UBERON_0035039) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [rectum](http://purl.obolibrary.org/obo/UBERON_0001052)
-### deep lingual vein `http://purl.obolibrary.org/obo/UBERON_8600069`
+### renal afferent arteriole `http://purl.obolibrary.org/obo/UBERON_0004639`
+#### Removed
+- [renal afferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004639) SubClassOf [artery](http://purl.obolibrary.org/obo/UBERON_0001637)
+
+- [renal afferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004639) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [nephron](http://purl.obolibrary.org/obo/UBERON_0001285)
#### Added
-- [deep lingual vein](http://purl.obolibrary.org/obo/UBERON_8600069) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [renal afferent arteriole](http://purl.obolibrary.org/obo/UBERON_0004639) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [nephron](http://purl.obolibrary.org/obo/UBERON_0001285)
-- [deep lingual vein](http://purl.obolibrary.org/obo/UBERON_8600069) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+### renal artery `http://purl.obolibrary.org/obo/UBERON_0001184`
+#### Removed
+- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113))
-### descending palatine artery `http://purl.obolibrary.org/obo/UBERON_8600101`
+- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113)
#### Added
-- [descending palatine artery](http://purl.obolibrary.org/obo/UBERON_8600101) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113))
+
+- [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113)
-- [descending palatine artery](http://purl.obolibrary.org/obo/UBERON_8600101) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+### renal cortex artery `http://purl.obolibrary.org/obo/UBERON_0005268`
+#### Removed
+- [renal cortex artery](http://purl.obolibrary.org/obo/UBERON_0005268) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225))
-### dorsal lingual artery `http://purl.obolibrary.org/obo/UBERON_8600098`
+- [renal cortex artery](http://purl.obolibrary.org/obo/UBERON_0005268) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225)
#### Added
-- [dorsal lingual artery](http://purl.obolibrary.org/obo/UBERON_8600098) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [renal cortex artery](http://purl.obolibrary.org/obo/UBERON_0005268) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225))
+
+- [renal cortex artery](http://purl.obolibrary.org/obo/UBERON_0005268) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225)
-- [dorsal lingual artery](http://purl.obolibrary.org/obo/UBERON_8600098) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+### renal cortex vein `http://purl.obolibrary.org/obo/UBERON_0005269`
+#### Removed
+- [renal cortex vein](http://purl.obolibrary.org/obo/UBERON_0005269) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225))
-### dorsal lingual vein `http://purl.obolibrary.org/obo/UBERON_8600070`
+- [renal cortex vein](http://purl.obolibrary.org/obo/UBERON_0005269) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225)
#### Added
-- [dorsal lingual vein](http://purl.obolibrary.org/obo/UBERON_8600070) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [renal cortex vein](http://purl.obolibrary.org/obo/UBERON_0005269) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225))
-- [dorsal lingual vein](http://purl.obolibrary.org/obo/UBERON_8600070) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [renal cortex vein](http://purl.obolibrary.org/obo/UBERON_0005269) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225)
-### dorsal raphe nucleus `http://purl.obolibrary.org/obo/UBERON_0002043`
+### renal vein `http://purl.obolibrary.org/obo/UBERON_0001140`
#### Removed
-- [dorsal raphe nucleus](http://purl.obolibrary.org/obo/UBERON_0002043) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0000366"
+- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113))
+
+- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113)
+#### Added
+- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113))
+
+- [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113)
-### dural artery `http://purl.obolibrary.org/obo/UBERON_8600079`
+### respiratory system venous blood vessel `http://purl.obolibrary.org/obo/UBERON_0003476`
+#### Removed
+- [respiratory system venous blood vessel](http://purl.obolibrary.org/obo/UBERON_0003476) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004))
+
+- [respiratory system venous blood vessel](http://purl.obolibrary.org/obo/UBERON_0003476) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004)
#### Added
-- [dural artery](http://purl.obolibrary.org/obo/UBERON_8600079) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [respiratory system venous blood vessel](http://purl.obolibrary.org/obo/UBERON_0003476) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004))
-- [dural artery](http://purl.obolibrary.org/obo/UBERON_8600079) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [respiratory system venous blood vessel](http://purl.obolibrary.org/obo/UBERON_0003476) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [respiratory system](http://purl.obolibrary.org/obo/UBERON_0001004)
-### efferent filamental artery `http://purl.obolibrary.org/obo/UBERON_2005018`
+### right colic artery `http://purl.obolibrary.org/obo/UBERON_8410023`
#### Removed
-- [efferent filamental artery](http://purl.obolibrary.org/obo/UBERON_2005018) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [right colic artery](http://purl.obolibrary.org/obo/UBERON_8410023) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156)
+#### Added
+- [right colic artery](http://purl.obolibrary.org/obo/UBERON_8410023) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156)
-### efferent lamellar arteriole `http://purl.obolibrary.org/obo/UBERON_2005019`
+### right colic vein `http://purl.obolibrary.org/obo/UBERON_8410018`
#### Removed
-- [efferent lamellar arteriole](http://purl.obolibrary.org/obo/UBERON_2005019) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [right colic vein](http://purl.obolibrary.org/obo/UBERON_8410018) EquivalentTo [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156)) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138))
+
+- [right colic vein](http://purl.obolibrary.org/obo/UBERON_8410018) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156)
+#### Added
+- [right colic vein](http://purl.obolibrary.org/obo/UBERON_8410018) EquivalentTo [portal vein](http://purl.obolibrary.org/obo/UBERON_0002017) and ([RO_0002376](http://purl.obolibrary.org/obo/RO_0002376) some [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138)) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156))
+- [right colic vein](http://purl.obolibrary.org/obo/UBERON_8410018) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156)
-### efferent portion of pharyngeal arch artery `http://purl.obolibrary.org/obo/UBERON_2000202`
+
+### right coronary artery `http://purl.obolibrary.org/obo/UBERON_0001625`
#### Removed
-- [efferent portion of pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_2000202) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [right coronary artery](http://purl.obolibrary.org/obo/UBERON_0001625) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [heart](http://purl.obolibrary.org/obo/UBERON_0000948)
+#### Added
+- [right coronary artery](http://purl.obolibrary.org/obo/UBERON_0001625) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [heart](http://purl.obolibrary.org/obo/UBERON_0000948)
-### embryonic craniocervical region `http://purl.obolibrary.org/obo/UBERON_8450003`
+### right gastroepiploic artery `http://purl.obolibrary.org/obo/UBERON_0035829`
+#### Removed
+- [right gastroepiploic artery](http://purl.obolibrary.org/obo/UBERON_0035829) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA"
#### Added
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A craniocervical region that is part of an embryo."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-6095-8718"
+- [right gastroepiploic artery](http://purl.obolibrary.org/obo/UBERON_0035829) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108)
+ - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA"
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) [date](http://purl.org/dc/terms/date) "2024-09-12T14:40:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8450003"
+### right ovarian vein `http://purl.obolibrary.org/obo/UBERON_0039856`
+#### Removed
+- [right ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039856) EquivalentTo [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [right ovary](http://purl.obolibrary.org/obo/UBERON_0002118))
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) [label](http://www.w3.org/2000/01/rdf-schema#label) "embryonic craniocervical region"
+- [right ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039856) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [right ovary](http://purl.obolibrary.org/obo/UBERON_0002118)
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+#### Added
+- [right ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039856) EquivalentTo [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [right ovary](http://purl.obolibrary.org/obo/UBERON_0002118))
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-6095-8718](https://orcid.org/0000-0002-6095-8718)
+- [right ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039856) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [right ovary](http://purl.obolibrary.org/obo/UBERON_0002118)
-- Class: [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003)
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) EquivalentTo [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [embryo](http://purl.obolibrary.org/obo/UBERON_0000922))
+### right ovary `http://purl.obolibrary.org/obo/UBERON_0002118`
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) SubClassOf [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811)
+#### Added
+- [right ovary](http://purl.obolibrary.org/obo/UBERON_0002118) [depiction](http://xmlns.com/foaf/0.1/depiction) "https://cdn.humanatlas.io/digital-objects/ref-organ/ovary-female-right/v1.3/assets/3d-vh-f-ovary-r.glb"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
-- [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [embryo](http://purl.obolibrary.org/obo/UBERON_0000922)
+### right pulmonary artery `http://purl.obolibrary.org/obo/UBERON_0001651`
+#### Removed
+- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [right lung](http://purl.obolibrary.org/obo/UBERON_0002167))
-### esophageal vein `http://purl.obolibrary.org/obo/UBERON_8600053`
+- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [right lung](http://purl.obolibrary.org/obo/UBERON_0002167)
#### Added
-- [esophageal vein](http://purl.obolibrary.org/obo/UBERON_8600053) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [right lung](http://purl.obolibrary.org/obo/UBERON_0002167))
-- [esophageal vein](http://purl.obolibrary.org/obo/UBERON_8600053) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [right pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0001651) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [right lung](http://purl.obolibrary.org/obo/UBERON_0002167)
-### external nasal vein `http://purl.obolibrary.org/obo/UBERON_8600087`
+### right pulmonary vein `http://purl.obolibrary.org/obo/UBERON_0009032`
+#### Removed
+- [right pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0009032) EquivalentTo [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [right lung](http://purl.obolibrary.org/obo/UBERON_0002167))
+
+- [right pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0009032) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [right lung](http://purl.obolibrary.org/obo/UBERON_0002167)
#### Added
-- [external nasal vein](http://purl.obolibrary.org/obo/UBERON_8600087) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [right pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0009032) EquivalentTo [pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0002016) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [right lung](http://purl.obolibrary.org/obo/UBERON_0002167))
-- [external nasal vein](http://purl.obolibrary.org/obo/UBERON_8600087) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [right pulmonary vein](http://purl.obolibrary.org/obo/UBERON_0009032) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [right lung](http://purl.obolibrary.org/obo/UBERON_0002167)
-### fallopian tube `http://purl.obolibrary.org/obo/UBERON_0003889`
+### right renal artery `http://purl.obolibrary.org/obo/UBERON_0001185`
#### Removed
-- [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "fallopian tubes"
+- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) EquivalentTo [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539))
-- [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mammalian oviduct"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://sourceforge.net/p/geneontology/ontology-requests/8397/"
+- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539)
#### Added
-- [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "fallopian tubes"
- - [hasSynonymType](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003004](http://purl.obolibrary.org/obo/OMO_0003004)
+- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) EquivalentTo [renal artery](http://purl.obolibrary.org/obo/UBERON_0001184) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539))
-- [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) [hasBroadSynonym](http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym) "mammalian oviduct"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://sourceforge.net/p/geneontology/ontology-requests/8397/"
+- [right renal artery](http://purl.obolibrary.org/obo/UBERON_0001185) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539)
-### follicle associated epithelium `http://purl.obolibrary.org/obo/UBERON_8700001`
+### right renal vein `http://purl.obolibrary.org/obo/UBERON_0001141`
+#### Removed
+- [right renal vein](http://purl.obolibrary.org/obo/UBERON_0001141) EquivalentTo [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539))
+
+- [right renal vein](http://purl.obolibrary.org/obo/UBERON_0001141) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539)
#### Added
-- [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A specialized epithelial layer overlying the luminal surface of lymphoid follicles in gut-associated lymphoid tissue. It is found in Peyer's patches of the small intestine and appendix in humans and in the intestine and caecal patches in mice. This layer contains specialised M cells and has fewer goblet cells compared to surrounding tissue. This layer plays a crucial role in mucosal immune surveillance."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.4061/2010/823710"
+- [right renal vein](http://purl.obolibrary.org/obo/UBERON_0001141) EquivalentTo [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539))
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1007/s00702-022-02561-x"
+- [right renal vein](http://purl.obolibrary.org/obo/UBERON_0001141) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [right kidney](http://purl.obolibrary.org/obo/UBERON_0004539)
-- [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
-- [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001) [label](http://www.w3.org/2000/01/rdf-schema#label) "follicle associated epithelium"
+### right testicular artery `http://purl.obolibrary.org/obo/UBERON_0001188`
+#### Removed
+- [right testicular artery](http://purl.obolibrary.org/obo/UBERON_0001188) EquivalentTo [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [right testis](http://purl.obolibrary.org/obo/UBERON_0004534))
-- [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001) [date](http://purl.org/dc/terms/date) "2024-11-07T11:44:27Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
+- [right testicular artery](http://purl.obolibrary.org/obo/UBERON_0001188) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [right ureter](http://purl.obolibrary.org/obo/UBERON_0001222)
-- [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "FAE"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1007/s00702-022-02561-x"
+- [right testicular artery](http://purl.obolibrary.org/obo/UBERON_0001188) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [right testis](http://purl.obolibrary.org/obo/UBERON_0004534)
-- [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8700001"
+#### Added
+- [right testicular artery](http://purl.obolibrary.org/obo/UBERON_0001188) EquivalentTo [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [right testis](http://purl.obolibrary.org/obo/UBERON_0004534))
-- [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001) [contributor](http://purl.org/dc/terms/contributor) [0009-0005-7919-4905](https://orcid.org/0009-0005-7919-4905)
+- [right testicular artery](http://purl.obolibrary.org/obo/UBERON_0001188) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [right testis](http://purl.obolibrary.org/obo/UBERON_0004534)
-- Class: [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001)
+- [right testicular artery](http://purl.obolibrary.org/obo/UBERON_0001188) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [right ureter](http://purl.obolibrary.org/obo/UBERON_0001222)
-- [follicle associated epithelium](http://purl.obolibrary.org/obo/UBERON_8700001) SubClassOf [Peyer's patch epithelium](http://purl.obolibrary.org/obo/UBERON_0004693)
+### right testicular vein `http://purl.obolibrary.org/obo/UBERON_0000442`
+#### Removed
+- [right testicular vein](http://purl.obolibrary.org/obo/UBERON_0000442) EquivalentTo [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [right testis](http://purl.obolibrary.org/obo/UBERON_0004534))
-### glandular venous plexus `http://purl.obolibrary.org/obo/UBERON_8600072`
+- [right testicular vein](http://purl.obolibrary.org/obo/UBERON_0000442) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [right testis](http://purl.obolibrary.org/obo/UBERON_0004534)
#### Added
-- [glandular venous plexus](http://purl.obolibrary.org/obo/UBERON_8600072) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [right testicular vein](http://purl.obolibrary.org/obo/UBERON_0000442) EquivalentTo [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [right testis](http://purl.obolibrary.org/obo/UBERON_0004534))
-- [glandular venous plexus](http://purl.obolibrary.org/obo/UBERON_8600072) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [right testicular vein](http://purl.obolibrary.org/obo/UBERON_0000442) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [right testis](http://purl.obolibrary.org/obo/UBERON_0004534)
-### head `http://purl.obolibrary.org/obo/UBERON_0000033`
-#### Removed
-- [head](http://purl.obolibrary.org/obo/UBERON_0000033) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ZFA:0001114"
+### saliva-secreting gland `http://purl.obolibrary.org/obo/UBERON_0001044`
+#### Added
+- [saliva-secreting gland](http://purl.obolibrary.org/obo/UBERON_0001044) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [saliva-secreting gland](http://purl.obolibrary.org/obo/UBERON_0001044) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
-### hepatic portal venule `http://purl.obolibrary.org/obo/UBERON_8600085`
+
+### sensory system `http://purl.obolibrary.org/obo/UBERON_0001032`
#### Added
-- [hepatic portal venule](http://purl.obolibrary.org/obo/UBERON_8600085) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [sensory system](http://purl.obolibrary.org/obo/UBERON_0001032) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
-- [hepatic portal venule](http://purl.obolibrary.org/obo/UBERON_8600085) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [sensory system](http://purl.obolibrary.org/obo/UBERON_0001032) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
-### hypophyseal vein `http://purl.obolibrary.org/obo/UBERON_8600090`
+### sexually immature stage `http://purl.obolibrary.org/obo/UBERON_0000112`
+#### Removed
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000043"
#### Added
-- [hypophyseal vein](http://purl.obolibrary.org/obo/UBERON_8600090) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:BtauDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000041"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgorDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OanaDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OcunDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000043"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-- [hypophyseal vein](http://purl.obolibrary.org/obo/UBERON_8600090) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:AcarDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
-### incisor artery `http://purl.obolibrary.org/obo/UBERON_8600086`
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MmulDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000264"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000012"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CfamDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:CporDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PpanDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:PtroDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:EcabDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:MdomDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:GgalDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:FcatDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+
+### sigmoid vein `http://purl.obolibrary.org/obo/UBERON_0039228`
+#### Removed
+- [sigmoid vein](http://purl.obolibrary.org/obo/UBERON_0039228) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159))
+
+- [sigmoid vein](http://purl.obolibrary.org/obo/UBERON_0039228) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159)
#### Added
-- [incisor artery](http://purl.obolibrary.org/obo/UBERON_8600086) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [sigmoid vein](http://purl.obolibrary.org/obo/UBERON_0039228) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159))
-- [incisor artery](http://purl.obolibrary.org/obo/UBERON_8600086) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [sigmoid vein](http://purl.obolibrary.org/obo/UBERON_0039228) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0001159)
-### inferior anastomotic vein `http://purl.obolibrary.org/obo/UBERON_8600091`
+### skeletal system `http://purl.obolibrary.org/obo/UBERON_0001434`
#### Added
-- [inferior anastomotic vein](http://purl.obolibrary.org/obo/UBERON_8600091) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [skeletal system](http://purl.obolibrary.org/obo/UBERON_0001434) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
-- [inferior anastomotic vein](http://purl.obolibrary.org/obo/UBERON_8600091) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [skeletal system](http://purl.obolibrary.org/obo/UBERON_0001434) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
-### inner medulla vasa recta ascending limb `http://purl.obolibrary.org/obo/UBERON_0009092`
+### soleal vein `http://purl.obolibrary.org/obo/UBERON_0013142`
#### Removed
-- [inner medulla vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009092) [label](http://www.w3.org/2000/01/rdf-schema#label) "inner medulla vasa recta ascending limb"
+- [soleal vein](http://purl.obolibrary.org/obo/UBERON_0013142) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [soleus muscle](http://purl.obolibrary.org/obo/UBERON_0001389))
-- [inner medulla vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009092) SubClassOf [mesoderm-derived structure](http://purl.obolibrary.org/obo/UBERON_0004120)
+- [soleal vein](http://purl.obolibrary.org/obo/UBERON_0013142) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [soleus muscle](http://purl.obolibrary.org/obo/UBERON_0001389)
#### Added
-- [inner medulla vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009092) [label](http://www.w3.org/2000/01/rdf-schema#label) "inner medulla ascending vasa recta"
+- [soleal vein](http://purl.obolibrary.org/obo/UBERON_0013142) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [soleus muscle](http://purl.obolibrary.org/obo/UBERON_0001389))
+- [soleal vein](http://purl.obolibrary.org/obo/UBERON_0013142) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [soleus muscle](http://purl.obolibrary.org/obo/UBERON_0001389)
-### inner medulla vasa recta descending limb `http://purl.obolibrary.org/obo/UBERON_0009089`
+
+### spinal artery `http://purl.obolibrary.org/obo/UBERON_0002458`
#### Removed
-- [inner medulla vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009089) [label](http://www.w3.org/2000/01/rdf-schema#label) "inner medulla vasa recta descending limb"
+- [spinal artery](http://purl.obolibrary.org/obo/UBERON_0002458) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240))
-- [inner medulla vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009089) SubClassOf [mesoderm-derived structure](http://purl.obolibrary.org/obo/UBERON_0004120)
+- [spinal artery](http://purl.obolibrary.org/obo/UBERON_0002458) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240)
#### Added
-- [inner medulla vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009089) [label](http://www.w3.org/2000/01/rdf-schema#label) "inner medulla descending vasa recta"
+- [spinal artery](http://purl.obolibrary.org/obo/UBERON_0002458) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240))
+
+- [spinal artery](http://purl.obolibrary.org/obo/UBERON_0002458) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240)
-### inner renal medulla vasa recta `http://purl.obolibrary.org/obo/UBERON_0004776`
+### spleen venous sinus `http://purl.obolibrary.org/obo/UBERON_0009967`
#### Removed
-- [inner renal medulla vasa recta](http://purl.obolibrary.org/obo/UBERON_0004776) SubClassOf [renal venous blood vessel](http://purl.obolibrary.org/obo/UBERON_0014401)
+- [spleen venous sinus](http://purl.obolibrary.org/obo/UBERON_0009967) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
-- [inner renal medulla vasa recta](http://purl.obolibrary.org/obo/UBERON_0004776) SubClassOf [vein of abdomen](http://purl.obolibrary.org/obo/UBERON_0013126)
+- [spleen venous sinus](http://purl.obolibrary.org/obo/UBERON_0009967) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
-### intervertebral vein `http://purl.obolibrary.org/obo/UBERON_8600104`
+### splenic artery `http://purl.obolibrary.org/obo/UBERON_0001194`
+#### Removed
+- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [spleen](http://purl.obolibrary.org/obo/UBERON_0002106))
+
+- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [spleen](http://purl.obolibrary.org/obo/UBERON_0002106)
#### Added
-- [intervertebral vein](http://purl.obolibrary.org/obo/UBERON_8600104) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [spleen](http://purl.obolibrary.org/obo/UBERON_0002106))
-- [intervertebral vein](http://purl.obolibrary.org/obo/UBERON_8600104) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [splenic artery](http://purl.obolibrary.org/obo/UBERON_0001194) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [spleen](http://purl.obolibrary.org/obo/UBERON_0002106)
-### intra-acinar arteriole `http://purl.obolibrary.org/obo/UBERON_8600094`
+### stomatogastric ganglion `http://purl.obolibrary.org/obo/UBERON_8910001`
#### Added
-- [intra-acinar arteriole](http://purl.obolibrary.org/obo/UBERON_8600094) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) [label](http://www.w3.org/2000/01/rdf-schema#label) "stomatogastric ganglion"
-- [intra-acinar arteriole](http://purl.obolibrary.org/obo/UBERON_8600094) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "STG"
+ - [hasSynonymType](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003000](http://purl.obolibrary.org/obo/OMO_0003000)
-### intra-acinar venule `http://purl.obolibrary.org/obo/UBERON_8600061`
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:17009928"
-#### Added
-- [intra-acinar venule](http://purl.obolibrary.org/obo/UBERON_8600061) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910001"
-- [intra-acinar venule](http://purl.obolibrary.org/obo/UBERON_8600061) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The stomatogastric ganglion (STG) consists of about 30 neurons that form two central pattern generator circuits in crustaceans. STG neurons have large soma (~50-100 um) and have complex branches. The STG contains the motor neurons that innervate the striated muscles that move the gastric mill and pyloric regions of the stomach."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:17009928"
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
-### lateral femoral circumflex vein `http://purl.obolibrary.org/obo/UBERON_8600065`
+- Class: [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001)
-#### Added
-- [lateral femoral circumflex vein](http://purl.obolibrary.org/obo/UBERON_8600065) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) SubClassOf [organ system subdivision](http://purl.obolibrary.org/obo/UBERON_0011216)
+
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
-- [lateral femoral circumflex vein](http://purl.obolibrary.org/obo/UBERON_8600065) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [stomatogastric ganglion](http://purl.obolibrary.org/obo/UBERON_8910001) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
-### lateral sacral vein `http://purl.obolibrary.org/obo/UBERON_8600056`
+### stomatogastric nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910010`
#### Added
-- [lateral sacral vein](http://purl.obolibrary.org/obo/UBERON_8600056) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) [label](http://www.w3.org/2000/01/rdf-schema#label) "stomatogastric nerve (sensu Cancer borealis)"
-- [lateral sacral vein](http://purl.obolibrary.org/obo/UBERON_8600056) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910010"
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
-### left anterior descending artery `http://purl.obolibrary.org/obo/UBERON_8600102`
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "SGN (sensu Cancer borealis)"
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
-#### Added
-- [left anterior descending artery](http://purl.obolibrary.org/obo/UBERON_8600102) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The stomatogastric nerve (SGN) is made up of four separate nerves that emerge from the paired commissural ganglia, the superior and inferior esophageal nerves (SONs and IONs)."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
-- [left anterior descending artery](http://purl.obolibrary.org/obo/UBERON_8600102) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- Class: [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010)
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
-### lumbar vein `http://purl.obolibrary.org/obo/UBERON_8600105`
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+- [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+
+### stomatogastric nervous system `http://purl.obolibrary.org/obo/UBERON_8910000`
#### Added
-- [lumbar vein](http://purl.obolibrary.org/obo/UBERON_8600105) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+
+- [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The part of the nervous system that controls the stomach, such as in crabs, lobsters, and flies"
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
+
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:12966498"
+
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FlyBase:FBrf0089570"
+
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:27450880"
+
+- [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910000"
-- [lumbar vein](http://purl.obolibrary.org/obo/UBERON_8600105) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
+- [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000) [label](http://www.w3.org/2000/01/rdf-schema#label) "stomatogastric nervous system"
-### lung `http://purl.obolibrary.org/obo/UBERON_0002048`
+- Class: [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000)
+
+- [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6656](http://purl.obolibrary.org/obo/NCBITaxon_6656)
+
+- [stomatogastric nervous system](http://purl.obolibrary.org/obo/UBERON_8910000) SubClassOf [organ system subdivision](http://purl.obolibrary.org/obo/UBERON_0011216)
+
+
+### subclavian artery `http://purl.obolibrary.org/obo/UBERON_0001533`
+#### Removed
+- [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pectoral appendage](http://purl.obolibrary.org/obo/UBERON_0004710)
#### Added
-- [lung](http://purl.obolibrary.org/obo/UBERON_0002048) SubClassOf [BFO_0000051](http://purl.obolibrary.org/obo/BFO_0000051) some [bronchus](http://purl.obolibrary.org/obo/UBERON_0002185)
+- [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pectoral appendage](http://purl.obolibrary.org/obo/UBERON_0004710)
-### lymphatic part of lymphoid system `http://purl.obolibrary.org/obo/UBERON_0006558`
+### subclavian vein `http://purl.obolibrary.org/obo/UBERON_0001587`
+#### Removed
+- [subclavian vein](http://purl.obolibrary.org/obo/UBERON_0001587) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [pectoral appendage](http://purl.obolibrary.org/obo/UBERON_0004710)
#### Added
-- [lymphatic part of lymphoid system](http://purl.obolibrary.org/obo/UBERON_0006558) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [subclavian vein](http://purl.obolibrary.org/obo/UBERON_0001587) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [pectoral appendage](http://purl.obolibrary.org/obo/UBERON_0004710)
-- [lymphatic part of lymphoid system](http://purl.obolibrary.org/obo/UBERON_0006558) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+### sublingual artery `http://purl.obolibrary.org/obo/UBERON_0001611`
+#### Removed
+- [sublingual artery](http://purl.obolibrary.org/obo/UBERON_0001611) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [sublingual gland](http://purl.obolibrary.org/obo/UBERON_0001832))
-### lymphoid system `http://purl.obolibrary.org/obo/UBERON_0002465`
+- [sublingual artery](http://purl.obolibrary.org/obo/UBERON_0001611) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [sublingual gland](http://purl.obolibrary.org/obo/UBERON_0001832)
#### Added
-- [lymphoid system](http://purl.obolibrary.org/obo/UBERON_0002465) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [sublingual artery](http://purl.obolibrary.org/obo/UBERON_0001611) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [sublingual gland](http://purl.obolibrary.org/obo/UBERON_0001832))
+
+- [sublingual artery](http://purl.obolibrary.org/obo/UBERON_0001611) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [sublingual gland](http://purl.obolibrary.org/obo/UBERON_0001832)
-- [lymphoid system](http://purl.obolibrary.org/obo/UBERON_0002465) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+### superficial dorsal vein of penis `http://purl.obolibrary.org/obo/UBERON_0039421`
+#### Removed
+- [superficial dorsal vein of penis](http://purl.obolibrary.org/obo/UBERON_0039421) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [prepuce of penis](http://purl.obolibrary.org/obo/UBERON_0001332)
-### mental vein `http://purl.obolibrary.org/obo/UBERON_8600068`
+- [superficial dorsal vein of penis](http://purl.obolibrary.org/obo/UBERON_0039421) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [skin of penis](http://purl.obolibrary.org/obo/UBERON_0001331)
#### Added
-- [mental vein](http://purl.obolibrary.org/obo/UBERON_8600068) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [superficial dorsal vein of penis](http://purl.obolibrary.org/obo/UBERON_0039421) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [skin of penis](http://purl.obolibrary.org/obo/UBERON_0001331)
-- [mental vein](http://purl.obolibrary.org/obo/UBERON_8600068) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [superficial dorsal vein of penis](http://purl.obolibrary.org/obo/UBERON_0039421) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [prepuce of penis](http://purl.obolibrary.org/obo/UBERON_0001332)
-### mesosalpinx `http://purl.obolibrary.org/obo/UBERON_0012331`
+### superficial external pudendal artery `http://purl.obolibrary.org/obo/UBERON_0007317`
#### Removed
-- [mesosalpinx](http://purl.obolibrary.org/obo/UBERON_0012331) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The mesosalpinx is part of the lining of the abdominal cavity in higher vertebrates, specifically the portion of the broad ligament that stretches from the uterine tube to the level of the ovary."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mesosalpinx"
+- [superficial external pudendal artery](http://purl.obolibrary.org/obo/UBERON_0007317) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [external genitalia](http://purl.obolibrary.org/obo/UBERON_0004176)
#### Added
-- [mesosalpinx](http://purl.obolibrary.org/obo/UBERON_0012331) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A serous layer that is part of the peritoneal lining of the abdominal cavity in higher vertebrates, specifically the portion of the broad ligament that stretches from the uterine (fallopian) tube to the ovary. It is made up of epithelial cells of mesothelium and a mesh of serous membrane lining."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mesosalpinx"
+- [superficial external pudendal artery](http://purl.obolibrary.org/obo/UBERON_0007317) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [external genitalia](http://purl.obolibrary.org/obo/UBERON_0004176)
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1016/B978-0-12-801238-3.64401-X"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:29763118"
+### superior cerebellar artery `http://purl.obolibrary.org/obo/UBERON_0001635`
+#### Removed
+- [superior cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0001635) EquivalentTo [cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0003472) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [metencephalon](http://purl.obolibrary.org/obo/UBERON_0001895)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [basilar artery](http://purl.obolibrary.org/obo/UBERON_0001633))
-- [mesosalpinx](http://purl.obolibrary.org/obo/UBERON_0012331) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "serous layer of fallopian tube"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1016/B978-0-12-801238-3.64401-X"
+- [superior cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0001635) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [metencephalon](http://purl.obolibrary.org/obo/UBERON_0001895)
-- [mesosalpinx](http://purl.obolibrary.org/obo/UBERON_0012331) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "fallopian tube mesosalpinx"
+- [superior cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0001635) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905)
-- [mesosalpinx](http://purl.obolibrary.org/obo/UBERON_0012331) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesentery of fallopian tube"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:29763118"
+#### Added
+- [superior cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0001635) EquivalentTo [cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0003472) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [basilar artery](http://purl.obolibrary.org/obo/UBERON_0001633)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [metencephalon](http://purl.obolibrary.org/obo/UBERON_0001895)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [cerebellum](http://purl.obolibrary.org/obo/UBERON_0002037))
-- [mesosalpinx](http://purl.obolibrary.org/obo/UBERON_0012331) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "mesentery of uterine tube"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:29763118"
+- [superior cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0001635) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [pineal body](http://purl.obolibrary.org/obo/UBERON_0001905)
-- [mesosalpinx](http://purl.obolibrary.org/obo/UBERON_0012331) SubClassOf [RO_0002221](http://purl.obolibrary.org/obo/RO_0002221) some [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889)
+- [superior cerebellar artery](http://purl.obolibrary.org/obo/UBERON_0001635) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [metencephalon](http://purl.obolibrary.org/obo/UBERON_0001895)
-### middle hemorrhoidal vein `http://purl.obolibrary.org/obo/UBERON_8600057`
+### superior esophageal nerve (sensu Cancer borealis) `http://purl.obolibrary.org/obo/UBERON_8910018`
#### Added
-- [middle hemorrhoidal vein](http://purl.obolibrary.org/obo/UBERON_8600057) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "SON (sensu Cancer borealis)"
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
-- [middle hemorrhoidal vein](http://purl.obolibrary.org/obo/UBERON_8600057) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior esophageal nerve (sensu Cancer borealis)"
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The superior esophageal nerve (SON) is one of the four nerves that make up the stomatogastric nerve (SGN)."
+ - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DOI:10.1016/B0-12-370878-8/00177-4"
-### mucosa of ascending colon `http://purl.obolibrary.org/obo/UBERON_0004990`
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8910018"
-#### Added
-- [mucosa of ascending colon](http://purl.obolibrary.org/obo/UBERON_0004990) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
-- [mucosa of ascending colon](http://purl.obolibrary.org/obo/UBERON_0004990) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-1909-7004](https://orcid.org/0000-0002-1909-7004)
+- Class: [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018)
-### mucosa of descending colon `http://purl.obolibrary.org/obo/UBERON_0004992`
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6692](http://purl.obolibrary.org/obo/NCBITaxon_6692)
-#### Added
-- [mucosa of descending colon](http://purl.obolibrary.org/obo/UBERON_0004992) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) SubClassOf [functional part of brain](http://purl.obolibrary.org/obo/UBERON_0035014)
+
+- [superior esophageal nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910018) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomatogastric nerve (sensu Cancer borealis)](http://purl.obolibrary.org/obo/UBERON_8910010)
+
+
+### superior gluteal artery `http://purl.obolibrary.org/obo/UBERON_0001315`
+#### Removed
+- [superior gluteal artery](http://purl.obolibrary.org/obo/UBERON_0001315) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [obturator internus](http://purl.obolibrary.org/obo/UBERON_0011048)
-- [mucosa of descending colon](http://purl.obolibrary.org/obo/UBERON_0004992) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [superior gluteal artery](http://purl.obolibrary.org/obo/UBERON_0001315) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [iliacus muscle](http://purl.obolibrary.org/obo/UBERON_0001369)
+- [superior gluteal artery](http://purl.obolibrary.org/obo/UBERON_0001315) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [piriformis muscle](http://purl.obolibrary.org/obo/UBERON_0008529)
-### mucosa of rectum `http://purl.obolibrary.org/obo/UBERON_0003346`
+- [superior gluteal artery](http://purl.obolibrary.org/obo/UBERON_0001315) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ilium](http://purl.obolibrary.org/obo/UBERON_0001273)
#### Added
-- [mucosa of rectum](http://purl.obolibrary.org/obo/UBERON_0003346) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [superior gluteal artery](http://purl.obolibrary.org/obo/UBERON_0001315) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [iliacus muscle](http://purl.obolibrary.org/obo/UBERON_0001369)
-- [mucosa of rectum](http://purl.obolibrary.org/obo/UBERON_0003346) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [superior gluteal artery](http://purl.obolibrary.org/obo/UBERON_0001315) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [obturator internus](http://purl.obolibrary.org/obo/UBERON_0011048)
+- [superior gluteal artery](http://purl.obolibrary.org/obo/UBERON_0001315) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ilium](http://purl.obolibrary.org/obo/UBERON_0001273)
-### mucosa of sigmoid colon `http://purl.obolibrary.org/obo/UBERON_0004993`
+- [superior gluteal artery](http://purl.obolibrary.org/obo/UBERON_0001315) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [piriformis muscle](http://purl.obolibrary.org/obo/UBERON_0008529)
-#### Added
-- [mucosa of sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0004993) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
-- [mucosa of sigmoid colon](http://purl.obolibrary.org/obo/UBERON_0004993) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+### superior mesenteric artery `http://purl.obolibrary.org/obo/UBERON_0001182`
+#### Removed
+- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) EquivalentTo [mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0005616) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116))
+- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)
-### mucosa of transverse colon `http://purl.obolibrary.org/obo/UBERON_0004991`
+- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)
#### Added
-- [mucosa of transverse colon](http://purl.obolibrary.org/obo/UBERON_0004991) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) EquivalentTo [mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0005616) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116))
+
+- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ileum](http://purl.obolibrary.org/obo/UBERON_0002116)
-- [mucosa of transverse colon](http://purl.obolibrary.org/obo/UBERON_0004991) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [superior mesenteric artery](http://purl.obolibrary.org/obo/UBERON_0001182) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [jejunum](http://purl.obolibrary.org/obo/UBERON_0002115)
-### outer medulla vasa recta ascending limb `http://purl.obolibrary.org/obo/UBERON_0009093`
+### superior mesenteric vein `http://purl.obolibrary.org/obo/UBERON_0001138`
#### Removed
-- [outer medulla vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009093) [label](http://www.w3.org/2000/01/rdf-schema#label) "outer medulla vasa recta ascending limb"
+- [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138) EquivalentTo [mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0005617) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108))
-- [outer medulla vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009093) SubClassOf [mesoderm-derived structure](http://purl.obolibrary.org/obo/UBERON_0004120)
+- [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108)
#### Added
-- [outer medulla vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009093) [label](http://www.w3.org/2000/01/rdf-schema#label) "outer medulla ascending vasa recta"
+- [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138) EquivalentTo [mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0005617) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108))
+- [superior mesenteric vein](http://purl.obolibrary.org/obo/UBERON_0001138) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108)
-### outer medulla vasa recta descending limb `http://purl.obolibrary.org/obo/UBERON_0009090`
+
+### superior palpebral vein `http://purl.obolibrary.org/obo/UBERON_0014768`
#### Removed
-- [outer medulla vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009090) [label](http://www.w3.org/2000/01/rdf-schema#label) "outer medulla vasa recta descending limb"
+- [superior palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014768) EquivalentTo [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [upper eyelid](http://purl.obolibrary.org/obo/UBERON_0001712))
-- [outer medulla vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009090) SubClassOf [mesoderm-derived structure](http://purl.obolibrary.org/obo/UBERON_0004120)
+- [superior palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014768) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [upper eyelid](http://purl.obolibrary.org/obo/UBERON_0001712)
#### Added
-- [outer medulla vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009090) [label](http://www.w3.org/2000/01/rdf-schema#label) "outer medulla descending vasa recta"
+- [superior palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014768) EquivalentTo [palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014769) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [upper eyelid](http://purl.obolibrary.org/obo/UBERON_0001712))
+- [superior palpebral vein](http://purl.obolibrary.org/obo/UBERON_0014768) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [upper eyelid](http://purl.obolibrary.org/obo/UBERON_0001712)
-### outer renal medulla vasa recta `http://purl.obolibrary.org/obo/UBERON_0004775`
-#### Removed
-- [outer renal medulla vasa recta](http://purl.obolibrary.org/obo/UBERON_0004775) SubClassOf [vein of abdomen](http://purl.obolibrary.org/obo/UBERON_0013126)
-- [outer renal medulla vasa recta](http://purl.obolibrary.org/obo/UBERON_0004775) SubClassOf [renal venous blood vessel](http://purl.obolibrary.org/obo/UBERON_0014401)
+### superior pancreaticoduodenal artery `http://purl.obolibrary.org/obo/UBERON_0002070`
+#### Removed
+- [superior pancreaticoduodenal artery](http://purl.obolibrary.org/obo/UBERON_0002070) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108)
+#### Added
+- [superior pancreaticoduodenal artery](http://purl.obolibrary.org/obo/UBERON_0002070) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [small intestine](http://purl.obolibrary.org/obo/UBERON_0002108)
-### oviduct `http://purl.obolibrary.org/obo/UBERON_0000993`
+### superior superficial cervical thymic artery `http://purl.obolibrary.org/obo/UBERON_0018249`
#### Removed
-- [oviduct](http://purl.obolibrary.org/obo/UBERON_0000993) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "uterine tube"
+- [superior superficial cervical thymic artery](http://purl.obolibrary.org/obo/UBERON_0018249) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [superficial cervical thymus](http://purl.obolibrary.org/obo/UBERON_0018244)
#### Added
-- [oviduct](http://purl.obolibrary.org/obo/UBERON_0000993) [hasNarrowSynonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "uterine tube"
+- [superior superficial cervical thymic artery](http://purl.obolibrary.org/obo/UBERON_0018249) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [superficial cervical thymus](http://purl.obolibrary.org/obo/UBERON_0018244)
-### percardiacophrenic artery `http://purl.obolibrary.org/obo/UBERON_8600081`
+### superior vesical artery `http://purl.obolibrary.org/obo/UBERON_0001312`
+#### Removed
+- [superior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001312) EquivalentTo [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056))
#### Added
-- [percardiacophrenic artery](http://purl.obolibrary.org/obo/UBERON_8600081) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [superior vesical artery](http://purl.obolibrary.org/obo/UBERON_0001312) EquivalentTo [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056))
-- [percardiacophrenic artery](http://purl.obolibrary.org/obo/UBERON_8600081) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+### superior vesical vein `http://purl.obolibrary.org/obo/UBERON_0006355`
+#### Removed
+- [superior vesical vein](http://purl.obolibrary.org/obo/UBERON_0006355) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056))
-### pericardial artery `http://purl.obolibrary.org/obo/UBERON_8600080`
+- [superior vesical vein](http://purl.obolibrary.org/obo/UBERON_0006355) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056)
#### Added
-- [pericardial artery](http://purl.obolibrary.org/obo/UBERON_8600080) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [superior vesical vein](http://purl.obolibrary.org/obo/UBERON_0006355) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056))
-- [pericardial artery](http://purl.obolibrary.org/obo/UBERON_8600080) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [superior vesical vein](http://purl.obolibrary.org/obo/UBERON_0006355) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056)
-### pharyngeal arch `http://purl.obolibrary.org/obo/UBERON_0002539`
+### supraorbital artery `http://purl.obolibrary.org/obo/UBERON_0015160`
#### Removed
-- [pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0002539) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [embryonic head](http://purl.obolibrary.org/obo/UBERON_0008816)
- - [source](http://www.geneontology.org/formats/oboInOwl#source) "PMID:16313389"
+- [supraorbital artery](http://purl.obolibrary.org/obo/UBERON_0015160) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [frontal sinus](http://purl.obolibrary.org/obo/UBERON_0001760)
+
+- [supraorbital artery](http://purl.obolibrary.org/obo/UBERON_0015160) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [levator palpebrae superioris](http://purl.obolibrary.org/obo/UBERON_0001604)
#### Added
-- [pharyngeal arch](http://purl.obolibrary.org/obo/UBERON_0002539) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [embryonic craniocervical region](http://purl.obolibrary.org/obo/UBERON_8450003)
- - [source](http://www.geneontology.org/formats/oboInOwl#source) "PMID:16313389"
+- [supraorbital artery](http://purl.obolibrary.org/obo/UBERON_0015160) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [levator palpebrae superioris](http://purl.obolibrary.org/obo/UBERON_0001604)
+
+- [supraorbital artery](http://purl.obolibrary.org/obo/UBERON_0015160) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [mucosa of frontal sinus](http://purl.obolibrary.org/obo/UBERON_0005027)
-### pharyngeal arch artery `http://purl.obolibrary.org/obo/UBERON_0004363`
+### supraorbital vein `http://purl.obolibrary.org/obo/UBERON_0001654`
#### Removed
-- [pharyngeal arch artery](http://purl.obolibrary.org/obo/UBERON_0004363) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [supraorbital vein](http://purl.obolibrary.org/obo/UBERON_0001654) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [levator palpebrae superioris](http://purl.obolibrary.org/obo/UBERON_0001604)
+#### Added
+- [supraorbital vein](http://purl.obolibrary.org/obo/UBERON_0001654) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [levator palpebrae superioris](http://purl.obolibrary.org/obo/UBERON_0001604)
-### pharyngeal arch mesenchymal region `http://purl.obolibrary.org/obo/UBERON_0009494`
+### suprarenal artery `http://purl.obolibrary.org/obo/UBERON_0005624`
#### Removed
-- [pharyngeal arch mesenchymal region](http://purl.obolibrary.org/obo/UBERON_0009494) SubClassOf [head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005253)
+- [suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0005624) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369))
+
+- [suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0005624) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369)
#### Added
-- [pharyngeal arch mesenchymal region](http://purl.obolibrary.org/obo/UBERON_0009494) SubClassOf [embryonic tissue](http://purl.obolibrary.org/obo/UBERON_0005291)
+- [suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0005624) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369))
+
+- [suprarenal artery](http://purl.obolibrary.org/obo/UBERON_0005624) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369)
+
+### suprarenal vein `http://purl.obolibrary.org/obo/UBERON_0001146`
+#### Removed
+- [suprarenal vein](http://purl.obolibrary.org/obo/UBERON_0001146) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369))
-### posterolateral artery `http://purl.obolibrary.org/obo/UBERON_8600064`
+- [suprarenal vein](http://purl.obolibrary.org/obo/UBERON_0001146) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369)
#### Added
-- [posterolateral artery](http://purl.obolibrary.org/obo/UBERON_8600064) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [suprarenal vein](http://purl.obolibrary.org/obo/UBERON_0001146) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369))
-- [posterolateral artery](http://purl.obolibrary.org/obo/UBERON_8600064) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [suprarenal vein](http://purl.obolibrary.org/obo/UBERON_0001146) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [adrenal gland](http://purl.obolibrary.org/obo/UBERON_0002369)
-### prostatic venule `http://purl.obolibrary.org/obo/UBERON_8600084`
+### temporal vein `http://purl.obolibrary.org/obo/UBERON_0001671`
+#### Removed
+- [temporal vein](http://purl.obolibrary.org/obo/UBERON_0001671) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [temporal part of head](http://purl.obolibrary.org/obo/UBERON_0003251))
+
+- [temporal vein](http://purl.obolibrary.org/obo/UBERON_0001671) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [temporal part of head](http://purl.obolibrary.org/obo/UBERON_0003251)
#### Added
-- [prostatic venule](http://purl.obolibrary.org/obo/UBERON_8600084) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [temporal vein](http://purl.obolibrary.org/obo/UBERON_0001671) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [temporal part of head](http://purl.obolibrary.org/obo/UBERON_0003251))
-- [prostatic venule](http://purl.obolibrary.org/obo/UBERON_8600084) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [temporal vein](http://purl.obolibrary.org/obo/UBERON_0001671) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [temporal part of head](http://purl.obolibrary.org/obo/UBERON_0003251)
-### pulmonary arteriole `http://purl.obolibrary.org/obo/UBERON_8600077`
+### testicular artery `http://purl.obolibrary.org/obo/UBERON_0001187`
+#### Removed
+- [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [testis](http://purl.obolibrary.org/obo/UBERON_0000473))
+
+- [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [testis](http://purl.obolibrary.org/obo/UBERON_0000473)
#### Added
-- [pulmonary arteriole](http://purl.obolibrary.org/obo/UBERON_8600077) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [testis](http://purl.obolibrary.org/obo/UBERON_0000473))
+
+- [testicular artery](http://purl.obolibrary.org/obo/UBERON_0001187) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [testis](http://purl.obolibrary.org/obo/UBERON_0000473)
-- [pulmonary arteriole](http://purl.obolibrary.org/obo/UBERON_8600077) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+### testicular vein `http://purl.obolibrary.org/obo/UBERON_0001144`
+#### Removed
+- [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [testis](http://purl.obolibrary.org/obo/UBERON_0000473))
-### radial vein `http://purl.obolibrary.org/obo/UBERON_8600092`
+- [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [testis](http://purl.obolibrary.org/obo/UBERON_0000473)
#### Added
-- [radial vein](http://purl.obolibrary.org/obo/UBERON_8600092) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [testis](http://purl.obolibrary.org/obo/UBERON_0000473))
-- [radial vein](http://purl.obolibrary.org/obo/UBERON_8600092) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [testicular vein](http://purl.obolibrary.org/obo/UBERON_0001144) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [testis](http://purl.obolibrary.org/obo/UBERON_0000473)
-### recurrent branch afferent branchial artery `http://purl.obolibrary.org/obo/UBERON_2005014`
+### thoracodorsal artery `http://purl.obolibrary.org/obo/UBERON_0002011`
#### Removed
-- [recurrent branch afferent branchial artery](http://purl.obolibrary.org/obo/UBERON_2005014) SubClassOf [head blood vessel](http://purl.obolibrary.org/obo/UBERON_0003496)
+- [thoracodorsal artery](http://purl.obolibrary.org/obo/UBERON_0002011) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112))
+
+- [thoracodorsal artery](http://purl.obolibrary.org/obo/UBERON_0002011) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112)
+
+#### Added
+- [thoracodorsal artery](http://purl.obolibrary.org/obo/UBERON_0002011) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112))
+- [thoracodorsal artery](http://purl.obolibrary.org/obo/UBERON_0002011) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112)
-### septal perforating artery `http://purl.obolibrary.org/obo/UBERON_8600063`
+### thoracodorsal vein `http://purl.obolibrary.org/obo/UBERON_0002089`
+#### Removed
+- [thoracodorsal vein](http://purl.obolibrary.org/obo/UBERON_0002089) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112))
+
+- [thoracodorsal vein](http://purl.obolibrary.org/obo/UBERON_0002089) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112)
#### Added
-- [septal perforating artery](http://purl.obolibrary.org/obo/UBERON_8600063) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [thoracodorsal vein](http://purl.obolibrary.org/obo/UBERON_0002089) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112))
-- [septal perforating artery](http://purl.obolibrary.org/obo/UBERON_8600063) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [thoracodorsal vein](http://purl.obolibrary.org/obo/UBERON_0002089) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [latissimus dorsi muscle](http://purl.obolibrary.org/obo/UBERON_0001112)
-### stratum spinosum of esophageal epithelium `http://purl.obolibrary.org/obo/UBERON_8700002`
+### thymic artery `http://purl.obolibrary.org/obo/UBERON_0018243`
+#### Removed
+- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370))
+
+- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370)
#### Added
-- [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002) [label](http://www.w3.org/2000/01/rdf-schema#label) "stratum spinosum of esophageal epithelium"
+- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370))
-- [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002) [contributor](http://purl.org/dc/terms/contributor) [0009-0005-7919-4905](https://orcid.org/0009-0005-7919-4905)
+- [thymic artery](http://purl.obolibrary.org/obo/UBERON_0018243) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370)
-- [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002) [hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONamespace) "uberon"
-- [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The second deepest layer of the stratified squamous epithelium lining the esophagus, positioned directly above the stratum basale. It consists of multiple layers of keratinocytes connected by strong intercellular junctions called desmosomes, giving the cells a characteristic "spiny" appearance. This layer provides structural support, contributes to the epithelial barrier function, and serves as a transitional zone for keratinocytes migrating towards the luminal surface, playing a crucial role in maintaining the integrity and protective properties of the esophageal lining."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:26019440"
+### thymic vein `http://purl.obolibrary.org/obo/UBERON_0001591`
+#### Removed
+- [thymic vein](http://purl.obolibrary.org/obo/UBERON_0001591) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370))
+
+- [thymic vein](http://purl.obolibrary.org/obo/UBERON_0001591) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370)
+
+#### Added
+- [thymic vein](http://purl.obolibrary.org/obo/UBERON_0001591) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370))
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:21126700"
+- [thymic vein](http://purl.obolibrary.org/obo/UBERON_0001591) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370)
-- [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002) [date](http://purl.org/dc/terms/date) "2024-11-14T15:00:21Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime)
-- [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8700002"
+### thyroid artery `http://purl.obolibrary.org/obo/UBERON_0003847`
+#### Removed
+- [thyroid artery](http://purl.obolibrary.org/obo/UBERON_0003847) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046))
+
+- [thyroid artery](http://purl.obolibrary.org/obo/UBERON_0003847) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046)
-- Class: [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002)
+#### Added
+- [thyroid artery](http://purl.obolibrary.org/obo/UBERON_0003847) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046))
-- [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002) SubClassOf [esophagus squamous epithelium](http://purl.obolibrary.org/obo/UBERON_0006920)
+- [thyroid artery](http://purl.obolibrary.org/obo/UBERON_0003847) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046)
-- [stratum spinosum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700002) SubClassOf [non-keratinized stratified squamous epithelium](http://purl.obolibrary.org/obo/UBERON_0010304)
+### thyroid vein `http://purl.obolibrary.org/obo/UBERON_0018246`
+#### Removed
+- [thyroid vein](http://purl.obolibrary.org/obo/UBERON_0018246) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046))
-### sublingual vein `http://purl.obolibrary.org/obo/UBERON_8600071`
+- [thyroid vein](http://purl.obolibrary.org/obo/UBERON_0018246) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046)
#### Added
-- [sublingual vein](http://purl.obolibrary.org/obo/UBERON_8600071) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [thyroid vein](http://purl.obolibrary.org/obo/UBERON_0018246) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046))
-- [sublingual vein](http://purl.obolibrary.org/obo/UBERON_8600071) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [thyroid vein](http://purl.obolibrary.org/obo/UBERON_0018246) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [thyroid gland](http://purl.obolibrary.org/obo/UBERON_0002046)
-### submental artery `http://purl.obolibrary.org/obo/UBERON_8600096`
+### tongue `http://purl.obolibrary.org/obo/UBERON_0001723`
#### Added
-- [submental artery](http://purl.obolibrary.org/obo/UBERON_8600096) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [tongue](http://purl.obolibrary.org/obo/UBERON_0001723) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
-- [submental artery](http://purl.obolibrary.org/obo/UBERON_8600096) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [tongue](http://purl.obolibrary.org/obo/UBERON_0001723) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
-### suboccipital venous plexus `http://purl.obolibrary.org/obo/UBERON_8600076`
+### transverse facial artery `http://purl.obolibrary.org/obo/UBERON_0001615`
+#### Removed
+- [transverse facial artery](http://purl.obolibrary.org/obo/UBERON_0001615) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831)) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [superficial temporal artery](http://purl.obolibrary.org/obo/UBERON_0001614))
+
+- [transverse facial artery](http://purl.obolibrary.org/obo/UBERON_0001615) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831)
#### Added
-- [suboccipital venous plexus](http://purl.obolibrary.org/obo/UBERON_8600076) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [transverse facial artery](http://purl.obolibrary.org/obo/UBERON_0001615) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [superficial temporal artery](http://purl.obolibrary.org/obo/UBERON_0001614)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [masseter muscle](http://purl.obolibrary.org/obo/UBERON_0001597)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831))
-- [suboccipital venous plexus](http://purl.obolibrary.org/obo/UBERON_8600076) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [transverse facial artery](http://purl.obolibrary.org/obo/UBERON_0001615) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831)
-### subsegmental pulmonary artery `http://purl.obolibrary.org/obo/UBERON_8600060`
+### ureteric segment of renal artery `http://purl.obolibrary.org/obo/UBERON_0003468`
+#### Removed
+- [ureteric segment of renal artery](http://purl.obolibrary.org/obo/UBERON_0003468) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056))
+
+- [ureteric segment of renal artery](http://purl.obolibrary.org/obo/UBERON_0003468) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056)
#### Added
-- [subsegmental pulmonary artery](http://purl.obolibrary.org/obo/UBERON_8600060) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [ureteric segment of renal artery](http://purl.obolibrary.org/obo/UBERON_0003468) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056))
-- [subsegmental pulmonary artery](http://purl.obolibrary.org/obo/UBERON_8600060) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [ureteric segment of renal artery](http://purl.obolibrary.org/obo/UBERON_0003468) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ureter](http://purl.obolibrary.org/obo/UBERON_0000056)
-### subsegmental pulmonary vein `http://purl.obolibrary.org/obo/UBERON_8600052`
+### urethral artery `http://purl.obolibrary.org/obo/UBERON_0039355`
+#### Removed
+- [urethral artery](http://purl.obolibrary.org/obo/UBERON_0039355) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057))
+
+- [urethral artery](http://purl.obolibrary.org/obo/UBERON_0039355) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057)
#### Added
-- [subsegmental pulmonary vein](http://purl.obolibrary.org/obo/UBERON_8600052) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [urethral artery](http://purl.obolibrary.org/obo/UBERON_0039355) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057))
-- [subsegmental pulmonary vein](http://purl.obolibrary.org/obo/UBERON_8600052) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [urethral artery](http://purl.obolibrary.org/obo/UBERON_0039355) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057)
-### superficial iliac circumflex vein `http://purl.obolibrary.org/obo/UBERON_8600082`
+### urethral vein `http://purl.obolibrary.org/obo/UBERON_0039377`
+#### Removed
+- [urethral vein](http://purl.obolibrary.org/obo/UBERON_0039377) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057))
+
+- [urethral vein](http://purl.obolibrary.org/obo/UBERON_0039377) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057)
#### Added
-- [superficial iliac circumflex vein](http://purl.obolibrary.org/obo/UBERON_8600082) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [urethral vein](http://purl.obolibrary.org/obo/UBERON_0039377) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057))
-- [superficial iliac circumflex vein](http://purl.obolibrary.org/obo/UBERON_8600082) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [urethral vein](http://purl.obolibrary.org/obo/UBERON_0039377) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057)
-### supratrochlear vein `http://purl.obolibrary.org/obo/UBERON_8600088`
+### uterine artery `http://purl.obolibrary.org/obo/UBERON_0002493`
+#### Removed
+- [uterine artery](http://purl.obolibrary.org/obo/UBERON_0002493) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [uterus](http://purl.obolibrary.org/obo/UBERON_0000995)) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [upper part of vagina](http://purl.obolibrary.org/obo/UBERON_0003974))
+
+- [uterine artery](http://purl.obolibrary.org/obo/UBERON_0002493) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [uterus](http://purl.obolibrary.org/obo/UBERON_0000995)
+
+- [uterine artery](http://purl.obolibrary.org/obo/UBERON_0002493) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [upper part of vagina](http://purl.obolibrary.org/obo/UBERON_0003974)
#### Added
-- [supratrochlear vein](http://purl.obolibrary.org/obo/UBERON_8600088) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [uterine artery](http://purl.obolibrary.org/obo/UBERON_0002493) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [ovary](http://purl.obolibrary.org/obo/UBERON_0000992)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [uterus](http://purl.obolibrary.org/obo/UBERON_0000995)) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [upper part of vagina](http://purl.obolibrary.org/obo/UBERON_0003974))
+
+- [uterine artery](http://purl.obolibrary.org/obo/UBERON_0002493) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [upper part of vagina](http://purl.obolibrary.org/obo/UBERON_0003974)
-- [supratrochlear vein](http://purl.obolibrary.org/obo/UBERON_8600088) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [uterine artery](http://purl.obolibrary.org/obo/UBERON_0002493) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [uterus](http://purl.obolibrary.org/obo/UBERON_0000995)
-### supreme intercostal vein `http://purl.obolibrary.org/obo/UBERON_8600054`
+### uterine spiral artery `http://purl.obolibrary.org/obo/UBERON_0015171`
+#### Removed
+- [uterine spiral artery](http://purl.obolibrary.org/obo/UBERON_0015171) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [endometrium](http://purl.obolibrary.org/obo/UBERON_0001295)
#### Added
-- [supreme intercostal vein](http://purl.obolibrary.org/obo/UBERON_8600054) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [uterine spiral artery](http://purl.obolibrary.org/obo/UBERON_0015171) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [endometrium](http://purl.obolibrary.org/obo/UBERON_0001295)
-- [supreme intercostal vein](http://purl.obolibrary.org/obo/UBERON_8600054) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+### uveal vein `http://purl.obolibrary.org/obo/UBERON_0035546`
+#### Removed
+- [uveal vein](http://purl.obolibrary.org/obo/UBERON_0035546) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [uvea](http://purl.obolibrary.org/obo/UBERON_0001768))
-### thoracoacromial vein `http://purl.obolibrary.org/obo/UBERON_8600074`
+- [uveal vein](http://purl.obolibrary.org/obo/UBERON_0035546) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [uvea](http://purl.obolibrary.org/obo/UBERON_0001768)
#### Added
-- [thoracoacromial vein](http://purl.obolibrary.org/obo/UBERON_8600074) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [uveal vein](http://purl.obolibrary.org/obo/UBERON_0035546) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [uvea](http://purl.obolibrary.org/obo/UBERON_0001768))
-- [thoracoacromial vein](http://purl.obolibrary.org/obo/UBERON_8600074) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [uveal vein](http://purl.obolibrary.org/obo/UBERON_0035546) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [uvea](http://purl.obolibrary.org/obo/UBERON_0001768)
-### thyrocervical trunk `http://purl.obolibrary.org/obo/UBERON_8600062`
+### vein of hindlimb zeugopod `http://purl.obolibrary.org/obo/UBERON_0001551`
+#### Removed
+- [vein of hindlimb zeugopod](http://purl.obolibrary.org/obo/UBERON_0001551) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [triceps surae](http://purl.obolibrary.org/obo/UBERON_0001665)
#### Added
-- [thyrocervical trunk](http://purl.obolibrary.org/obo/UBERON_8600062) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [vein of hindlimb zeugopod](http://purl.obolibrary.org/obo/UBERON_0001551) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [triceps surae](http://purl.obolibrary.org/obo/UBERON_0001665)
-- [thyrocervical trunk](http://purl.obolibrary.org/obo/UBERON_8600062) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+### vein of lip `http://purl.obolibrary.org/obo/UBERON_0013136`
+#### Removed
+- [vein of lip](http://purl.obolibrary.org/obo/UBERON_0013136) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lip](http://purl.obolibrary.org/obo/UBERON_0001833))
-### tonsil `http://purl.obolibrary.org/obo/UBERON_0002372`
+- [vein of lip](http://purl.obolibrary.org/obo/UBERON_0013136) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lip](http://purl.obolibrary.org/obo/UBERON_0001833)
#### Added
-- [tonsil](http://purl.obolibrary.org/obo/UBERON_0002372) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [vein of lip](http://purl.obolibrary.org/obo/UBERON_0013136) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lip](http://purl.obolibrary.org/obo/UBERON_0001833))
-- [tonsil](http://purl.obolibrary.org/obo/UBERON_0002372) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [vein of lip](http://purl.obolibrary.org/obo/UBERON_0013136) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lip](http://purl.obolibrary.org/obo/UBERON_0001833)
-### transverse cervical vein `http://purl.obolibrary.org/obo/UBERON_8600075`
+### vein of lower lip `http://purl.obolibrary.org/obo/UBERON_0003478`
+#### Removed
+- [vein of lower lip](http://purl.obolibrary.org/obo/UBERON_0003478) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835))
+
+- [vein of lower lip](http://purl.obolibrary.org/obo/UBERON_0003478) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835)
#### Added
-- [transverse cervical vein](http://purl.obolibrary.org/obo/UBERON_8600075) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [vein of lower lip](http://purl.obolibrary.org/obo/UBERON_0003478) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835))
-- [transverse cervical vein](http://purl.obolibrary.org/obo/UBERON_8600075) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [vein of lower lip](http://purl.obolibrary.org/obo/UBERON_0003478) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [lower lip](http://purl.obolibrary.org/obo/UBERON_0001835)
-### transverse nasal root vein `http://purl.obolibrary.org/obo/UBERON_8600089`
+### vein of upper lip `http://purl.obolibrary.org/obo/UBERON_0003477`
+#### Removed
+- [vein of upper lip](http://purl.obolibrary.org/obo/UBERON_0003477) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834))
+
+- [vein of upper lip](http://purl.obolibrary.org/obo/UBERON_0003477) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834)
#### Added
-- [transverse nasal root vein](http://purl.obolibrary.org/obo/UBERON_8600089) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [vein of upper lip](http://purl.obolibrary.org/obo/UBERON_0003477) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834))
-- [transverse nasal root vein](http://purl.obolibrary.org/obo/UBERON_8600089) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [vein of upper lip](http://purl.obolibrary.org/obo/UBERON_0003477) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [upper lip](http://purl.obolibrary.org/obo/UBERON_0001834)
-### ulnar vein `http://purl.obolibrary.org/obo/UBERON_8600093`
+### vertebral vein `http://purl.obolibrary.org/obo/UBERON_0001588`
+#### Removed
+- [vertebral vein](http://purl.obolibrary.org/obo/UBERON_0001588) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240)
#### Added
-- [ulnar vein](http://purl.obolibrary.org/obo/UBERON_8600093) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [vertebral vein](http://purl.obolibrary.org/obo/UBERON_0001588) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [spinal cord](http://purl.obolibrary.org/obo/UBERON_0002240)
-- [ulnar vein](http://purl.obolibrary.org/obo/UBERON_8600093) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+### vesical artery `http://purl.obolibrary.org/obo/UBERON_0009027`
+#### Removed
+- [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255))
-### uterine vein `http://purl.obolibrary.org/obo/UBERON_8600058`
+- [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255)
#### Added
-- [uterine vein](http://purl.obolibrary.org/obo/UBERON_8600058) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+- [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255))
-- [uterine vein](http://purl.obolibrary.org/obo/UBERON_8600058) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
+- [vesical artery](http://purl.obolibrary.org/obo/UBERON_0009027) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255)
-### vasa recta `http://purl.obolibrary.org/obo/UBERON_0004726`
+### vesical vein `http://purl.obolibrary.org/obo/UBERON_0002460`
#### Removed
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "arteria recta"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Vasa_recta"
+- [vesical vein](http://purl.obolibrary.org/obo/UBERON_0002460) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255))
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "arteriae rectae"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Vasa_recta"
+- [vesical vein](http://purl.obolibrary.org/obo/UBERON_0002460) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255)
+
+#### Added
+- [vesical vein](http://purl.obolibrary.org/obo/UBERON_0002460) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255))
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "renal medullary capillary"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EMAPA:30043"
+- [vesical vein](http://purl.obolibrary.org/obo/UBERON_0002460) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [urinary bladder](http://purl.obolibrary.org/obo/UBERON_0001255)
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "arteriolae rectae renis"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA"
- - [hasSynonymType](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003011](http://purl.obolibrary.org/obo/OMO_0003011)
+### vestibular bulb artery `http://purl.obolibrary.org/obo/UBERON_0034727`
+#### Removed
+- [vestibular bulb artery](http://purl.obolibrary.org/obo/UBERON_0034727) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [bulb of vestibule](http://purl.obolibrary.org/obo/UBERON_0013129))
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:72006"
+- [vestibular bulb artery](http://purl.obolibrary.org/obo/UBERON_0034727) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [bulb of vestibule](http://purl.obolibrary.org/obo/UBERON_0013129)
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [IAO_0000116](http://purl.obolibrary.org/obo/IAO_0000116) "TODO - is this a vein or set of veins? in MA it is a venous blood vessel"
+#### Added
+- [vestibular bulb artery](http://purl.obolibrary.org/obo/UBERON_0034727) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [bulb of vestibule](http://purl.obolibrary.org/obo/UBERON_0013129))
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "straight arterioles of kidney"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:72006"
+- [vestibular bulb artery](http://purl.obolibrary.org/obo/UBERON_0034727) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [bulb of vestibule](http://purl.obolibrary.org/obo/UBERON_0013129)
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "In the blood supply of the kidney, the vasa recta renis (or straight arteries of kidney, or straight arterioles of kidney) form a series of straight capillaries in the medulla. They lie parallel to the loop of Henle. These vessels branch off the efferent arterioles of juxtamedullary nephrons (those nephrons closest to the medulla), enter the medulla, and surround the loop of Henle."
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Vasa_recta"
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "set of straight arterioles of kidney"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:72006"
+### vestibular bulb vein `http://purl.obolibrary.org/obo/UBERON_0039379`
+#### Removed
+- [vestibular bulb vein](http://purl.obolibrary.org/obo/UBERON_0039379) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [bulb of vestibule](http://purl.obolibrary.org/obo/UBERON_0013129))
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) SubClassOf [renal vein](http://purl.obolibrary.org/obo/UBERON_0001140)
+- [vestibular bulb vein](http://purl.obolibrary.org/obo/UBERON_0039379) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [bulb of vestibule](http://purl.obolibrary.org/obo/UBERON_0013129)
#### Added
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasNarrowSynonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "straight arterioles of kidney"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:72006"
+- [vestibular bulb vein](http://purl.obolibrary.org/obo/UBERON_0039379) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [bulb of vestibule](http://purl.obolibrary.org/obo/UBERON_0013129))
+
+- [vestibular bulb vein](http://purl.obolibrary.org/obo/UBERON_0039379) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [bulb of vestibule](http://purl.obolibrary.org/obo/UBERON_0013129)
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A group of microvessels that are part of the kidney. A vasa recta has a hairpin-like shape, entering the renal medulla as the straight arterioles and surrounds the loop of Henle, forming a capillary network. Finally it leaves the renal medulla to ascend to the cortex as the straight venules. The primary function of the vasa recta is to facilitate countercurrent exchange, which is essential for the kidney's ability to concentrate urine"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:23126245"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Vasa_recta"
+### visual system `http://purl.obolibrary.org/obo/UBERON_0002104`
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasNarrowSynonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "arteriolae rectae renis"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:TA"
+#### Added
+- [visual system](http://purl.obolibrary.org/obo/UBERON_0002104) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+
+- [visual system](http://purl.obolibrary.org/obo/UBERON_0002104) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
- - [hasSynonymType](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003011](http://purl.obolibrary.org/obo/OMO_0003011)
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:72006"
+### vitelline artery `http://purl.obolibrary.org/obo/UBERON_0006002`
+#### Removed
+- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040))
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasNarrowSynonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "set of straight arterioles of kidney"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:72006"
+- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) SubClassOf [RO_0002178](http://purl.obolibrary.org/obo/RO_0002178) some [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040)
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) [hasNarrowSynonym](http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym) "renal medullary capillary"
- - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "EMAPA:30043"
+#### Added
+- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) EquivalentTo [artery](http://purl.obolibrary.org/obo/UBERON_0001637) and ([RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040))
-- [vasa recta](http://purl.obolibrary.org/obo/UBERON_0004726) SubClassOf [kidney vasculature](http://purl.obolibrary.org/obo/UBERON_0006544)
+- [vitelline artery](http://purl.obolibrary.org/obo/UBERON_0006002) SubClassOf [RO_0020101](http://purl.obolibrary.org/obo/RO_0020101) some [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040)
-### vasa recta ascending limb `http://purl.obolibrary.org/obo/UBERON_0009091`
+### vitelline vein `http://purl.obolibrary.org/obo/UBERON_0005487`
#### Removed
-- [vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009091) [label](http://www.w3.org/2000/01/rdf-schema#label) "vasa recta ascending limb"
+- [vitelline vein](http://purl.obolibrary.org/obo/UBERON_0005487) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040))
-- [vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009091) SubClassOf [mesoderm-derived structure](http://purl.obolibrary.org/obo/UBERON_0004120)
+- [vitelline vein](http://purl.obolibrary.org/obo/UBERON_0005487) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040)
#### Added
-- [vasa recta ascending limb](http://purl.obolibrary.org/obo/UBERON_0009091) [label](http://www.w3.org/2000/01/rdf-schema#label) "ascending vasa recta"
+- [vitelline vein](http://purl.obolibrary.org/obo/UBERON_0005487) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040))
+- [vitelline vein](http://purl.obolibrary.org/obo/UBERON_0005487) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [yolk sac](http://purl.obolibrary.org/obo/UBERON_0001040)
-### vasa recta descending limb `http://purl.obolibrary.org/obo/UBERON_0009202`
+
+### vulval vein `http://purl.obolibrary.org/obo/UBERON_0036267`
#### Removed
-- [vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009202) [label](http://www.w3.org/2000/01/rdf-schema#label) "vasa recta descending limb"
+- [vulval vein](http://purl.obolibrary.org/obo/UBERON_0036267) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [mammalian vulva](http://purl.obolibrary.org/obo/UBERON_0000997))
-- [vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009202) SubClassOf [mesoderm-derived structure](http://purl.obolibrary.org/obo/UBERON_0004120)
+- [vulval vein](http://purl.obolibrary.org/obo/UBERON_0036267) SubClassOf [RO_0002179](http://purl.obolibrary.org/obo/RO_0002179) some [mammalian vulva](http://purl.obolibrary.org/obo/UBERON_0000997)
#### Added
-- [vasa recta descending limb](http://purl.obolibrary.org/obo/UBERON_0009202) [label](http://www.w3.org/2000/01/rdf-schema#label) "descending vasa recta"
+- [vulval vein](http://purl.obolibrary.org/obo/UBERON_0036267) EquivalentTo [vein](http://purl.obolibrary.org/obo/UBERON_0001638) and ([RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [mammalian vulva](http://purl.obolibrary.org/obo/UBERON_0000997))
+- [vulval vein](http://purl.obolibrary.org/obo/UBERON_0036267) SubClassOf [RO_0020102](http://purl.obolibrary.org/obo/RO_0020102) some [mammalian vulva](http://purl.obolibrary.org/obo/UBERON_0000997)
-### venous system `http://purl.obolibrary.org/obo/UBERON_0004582`
-#### Removed
-- [venous system](http://purl.obolibrary.org/obo/UBERON_0004582) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606)
-- [venous system](http://purl.obolibrary.org/obo/UBERON_0004582) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas)
+### zygote stage `http://purl.obolibrary.org/obo/UBERON_0000106`
+
+#### Added
+- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SscrDv_0000087"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:SsalDv_0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:OariDv_0000009"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MmusDv:0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+
+- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "HsapDv:0000003"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
+- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "obo:RnorDv_0000048"
+ - [mapping_justification](https://w3id.org/sssom/mapping_justification) [UnspecifiedMatching](https://w3id.org/semapv/vocab/UnspecifiedMatching)
diff --git a/src/ontology/reports/uberon-edit.obo-obo-report.tsv b/src/ontology/reports/uberon-edit.obo-obo-report.tsv
index abc0637d3..5b4a0aee4 100644
--- a/src/ontology/reports/uberon-edit.obo-obo-report.tsv
+++ b/src/ontology/reports/uberon-edit.obo-obo-report.tsv
@@ -2041,6 +2041,8 @@ WARN missing_definition RO:0002572 IAO:0000115
WARN missing_definition RO:0002576 IAO:0000115
WARN missing_definition RO:0003000 IAO:0000115
WARN missing_definition RO:0003001 IAO:0000115
+WARN missing_definition RO:0020101 IAO:0000115
+WARN missing_definition RO:0020102 IAO:0000115
WARN missing_definition UBERON:0000005 IAO:0000115
WARN missing_definition UBERON:0000112 IAO:0000115
WARN missing_definition UBERON:0000153 IAO:0000115
@@ -4857,6 +4859,7 @@ INFO lowercase_definition UBERON:0008933 IAO:0000115 (Chapin & Lin, 1984, rat):
INFO lowercase_definition UBERON:0011310 IAO:0000115 .The fossa for the masseter. In some therapsids, the coronoid process of the dentary bears a large external depression which accommodates the masseter -- an important muscle in closing and in grinding motions of the jaw.
INFO lowercase_definition UBERON:0039256 IAO:0000115 vein ascending the posterior aspect of the body of the pubis to drain into the inferior epigastric vein; this vein frequently (about 20% of patients) serves as an accessory or replaced obturator vein.
INFO lowercase_definition UBERON:4200243 IAO:0000115 ...a v-shaped pair of ridges, each carrying three or four smallpores Modified from Ahlberg et al. 2005.
+INFO lowercase_definition UBERON:8910019 IAO:0000115 innervates the foregut and midgut
INFO lowercase_definition obo:UBPROP_0000103 IAO:0000115 x pharyngeal_arch_number N if and only if (i) x is a pharyngeal arch, and (ii) x is ancestrally pharyngeal arch number N in a series of pharyngeal arches repeated along a antero-posterior axis, with arch_number 1 being the mandibular arch.
INFO lowercase_definition obo:UBPROP_0000104 IAO:0000115 x ray_number N if and only if (i) x is a ray, and (ii) x is ancestrally associated with ray number N in a series of phalanges repeated along a radio-ulnar or equivalent axis, with ray_number 1 being the anteriormost ray.
INFO lowercase_definition obo:UBPROP_0000105 IAO:0000115 x phalanx_number N if and only if (i) x is a phalanx, and (ii) x is phalanx number N in a series of phalanges repeated along an prixomo-distal axis, with phalanx_number 1 being the proximalmost phalanx. Note that in humans, the distalmost phalanx has phlanax_number 3, except in ray_number 1, where the distalmost has phalanx_number 2.
@@ -7651,6 +7654,7 @@ INFO missing_superclass UBERON:8420000 rdfs:subClassOf
INFO missing_superclass UBERON:8440011 rdfs:subClassOf
INFO missing_superclass UBERON:8450002 rdfs:subClassOf
INFO missing_superclass UBERON:8450003 rdfs:subClassOf
+INFO missing_superclass UBERON:8450004 rdfs:subClassOf
INFO missing_superclass UBERON:8470000 rdfs:subClassOf
INFO missing_superclass UBERON:8480000 rdfs:subClassOf
INFO missing_superclass UBERON:8480001 rdfs:subClassOf
diff --git a/subsets/life-stages-composite.obo b/subsets/life-stages-composite.obo
index 1b08b2c31..d0bb13883 100755
--- a/subsets/life-stages-composite.obo
+++ b/subsets/life-stages-composite.obo
@@ -1,5 +1,5 @@
format-version: 1.2
-data-version: uberon/releases/2024-11-25/subsets/life-stages-composite.owl
+data-version: uberon/releases/2025-01-15/subsets/life-stages-composite.owl
subsetdef: 1_STAR ""
subsetdef: 2_STAR ""
subsetdef: 3_STAR ""
@@ -55,6 +55,7 @@ subsetdef: goslim_prokaryote_ribbon ""
subsetdef: goslim_synapse ""
subsetdef: goslim_yeast ""
subsetdef: granular_stage ""
+subsetdef: granular_stage "Subset consisting of classes describing highly granular developmental stages (for instance, '23-year-old'). Such stages might be useful for annotation purpose, but might be folded into less granular parents for display purpose."
subsetdef: grouping_class "Subset consisting of classes creating for grouping purposes"
subsetdef: hidden_assertion ""
subsetdef: homology_grouping "A grouping class that depends on an assumption of homology between subclasses"
@@ -116,6 +117,7 @@ synonymtypedef: OMO:0003003 ""
synonymtypedef: OMO:0003004 "plural form"
synonymtypedef: OMO:0003011 "latin term"
synonymtypedef: PENDING_REVIEW "expert consultation and attribution required"
+synonymtypedef: PLURAL "PLURAL"
synonymtypedef: PRO-short-label ""
synonymtypedef: scientific_name ""
synonymtypedef: SENSU "taxonomic disambiguation"
@@ -134,7 +136,7 @@ idspace: swrl http://www.w3.org/2003/11/swrl#
idspace: swrlb http://www.w3.org/2003/11/swrlb#
idspace: terms http://purl.org/dc/terms/
ontology: uberon/subsets/life-stages-composite
-property_value: owl:versionInfo "2024-11-25" xsd:string
+property_value: owl:versionInfo "2025-01-15" xsd:string
[Term]
id: BFO:0000001
@@ -240,7 +242,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000068 ! embryo stage
property_value: end_mpf "3.0" xsd:float
-property_value: IAO:0000589 "first trimester of gestation (cow)" xsd:string
property_value: start_dpf "0.0" xsd:float
property_value: start_mpf "0.0" xsd:float
@@ -255,7 +256,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000012 ! third month of gestation (cow)
relationship: part_of UBERON:0000068 ! embryo stage
property_value: end_mpf "6.0" xsd:float
-property_value: IAO:0000589 "second trimester of gestation (cow)" xsd:string
property_value: start_mpf "3.0" xsd:float
[Term]
@@ -269,7 +269,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000015 ! sixth month of gestation (cow)
relationship: part_of UBERON:0000068 ! embryo stage
property_value: end_mpf "9.2" xsd:float
-property_value: IAO:0000589 "third trimester of gestation (cow)" xsd:string
property_value: start_mpf "6.0" xsd:float
[Term]
@@ -283,7 +282,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: part_of BtauDv:0000007 ! first trimester of gestation (cow)
property_value: end_dpf "30.0" xsd:float
property_value: end_mpf "1.0" xsd:float
-property_value: IAO:0000589 "first month of gestation (cow)" xsd:string
property_value: start_dpf "0.0" xsd:float
property_value: start_mpf "0.0" xsd:float
@@ -299,7 +297,6 @@ relationship: immediately_preceded_by BtauDv:0000010 ! first month of gestation
relationship: part_of BtauDv:0000007 ! first trimester of gestation (cow)
property_value: end_dpf "60.0" xsd:float
property_value: end_mpf "2.0" xsd:float
-property_value: IAO:0000589 "second month of gestation (cow)" xsd:string
property_value: start_dpf "30.0" xsd:float
property_value: start_mpf "1.0" xsd:float
@@ -315,7 +312,6 @@ relationship: immediately_preceded_by BtauDv:0000011 ! second month of gestation
relationship: part_of BtauDv:0000007 ! first trimester of gestation (cow)
property_value: end_dpf "90.0" xsd:float
property_value: end_mpf "3.0" xsd:float
-property_value: IAO:0000589 "third month of gestation (cow)" xsd:string
property_value: start_dpf "60.0" xsd:float
property_value: start_mpf "2.0" xsd:float
@@ -331,7 +327,6 @@ relationship: immediately_preceded_by BtauDv:0000012 ! third month of gestation
relationship: part_of BtauDv:0000008 ! second trimester of gestation (cow)
property_value: end_dpf "120.0" xsd:float
property_value: end_mpf "4.0" xsd:float
-property_value: IAO:0000589 "fourth month of gestation (cow)" xsd:string
property_value: start_dpf "90.0" xsd:float
property_value: start_mpf "3.0" xsd:float
@@ -347,7 +342,6 @@ relationship: immediately_preceded_by BtauDv:0000013 ! fourth month of gestation
relationship: part_of BtauDv:0000008 ! second trimester of gestation (cow)
property_value: end_dpf "150.0" xsd:float
property_value: end_mpf "5.0" xsd:float
-property_value: IAO:0000589 "fifth month of gestation (cow)" xsd:string
property_value: start_dpf "120.0" xsd:float
property_value: start_mpf "4.0" xsd:float
@@ -363,7 +357,6 @@ relationship: immediately_preceded_by BtauDv:0000014 ! fifth month of gestation
relationship: part_of BtauDv:0000008 ! second trimester of gestation (cow)
property_value: end_dpf "150.0" xsd:float
property_value: end_mpf "6.0" xsd:float
-property_value: IAO:0000589 "sixth month of gestation (cow)" xsd:string
property_value: start_dpf "120.0" xsd:float
property_value: start_mpf "5.0" xsd:float
@@ -379,7 +372,6 @@ relationship: immediately_preceded_by BtauDv:0000015 ! sixth month of gestation
relationship: part_of BtauDv:0000009 ! third trimester of gestation (cow)
property_value: end_dpf "210.0" xsd:float
property_value: end_mpf "7.0" xsd:float
-property_value: IAO:0000589 "seventh month of gestation (cow)" xsd:string
property_value: start_dpf "180.0" xsd:float
property_value: start_mpf "6.0" xsd:float
@@ -395,7 +387,6 @@ relationship: immediately_preceded_by BtauDv:0000016 ! seventh month of gestatio
relationship: part_of BtauDv:0000009 ! third trimester of gestation (cow)
property_value: end_dpf "240.0" xsd:float
property_value: end_mpf "8.0" xsd:float
-property_value: IAO:0000589 "eighth month of gestation cow stage (cow)" xsd:string
property_value: start_dpf "210.0" xsd:float
property_value: start_mpf "7.0" xsd:float
@@ -409,7 +400,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000017 ! eighth month of gestation cow stage (cow)
relationship: part_of BtauDv:0000009 ! third trimester of gestation (cow)
-property_value: IAO:0000589 "ninth and over month of gestation (cow)" xsd:string
property_value: start_dpf "240.0" xsd:float
property_value: start_mpf "8.0" xsd:float
@@ -424,7 +414,6 @@ relationship: immediately_preceded_by BtauDv:0000072 ! 29-day-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "2.0" xsd:float
property_value: end_wpb "8.0" xsd:float
-property_value: IAO:0000589 "1-month-old stage (cow)" xsd:string
property_value: start_dpb "30.0" xsd:float
property_value: start_mpb "1.0" xsd:float
property_value: start_wpb "4.0" xsd:float
@@ -440,7 +429,6 @@ relationship: immediately_preceded_by BtauDv:0000020 ! 1-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "3.0" xsd:float
property_value: end_wpb "12.0" xsd:float
-property_value: IAO:0000589 "2-month-old stage (cow)" xsd:string
property_value: start_mpb "2.0" xsd:float
property_value: start_wpb "8.0" xsd:float
@@ -454,7 +442,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000021 ! 2-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "4.0" xsd:float
-property_value: IAO:0000589 "3-month-old stage (cow)" xsd:string
property_value: start_mpb "3.0" xsd:float
[Term]
@@ -467,7 +454,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000022 ! 3-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "5.0" xsd:float
-property_value: IAO:0000589 "4-month-old stage (cow)" xsd:string
property_value: start_mpb "4.0" xsd:float
[Term]
@@ -480,7 +466,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000023 ! 4-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "6.0" xsd:float
-property_value: IAO:0000589 "5-month-old stage (cow)" xsd:string
property_value: start_mpb "5.0" xsd:float
[Term]
@@ -493,7 +478,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000024 ! 5-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "7.0" xsd:float
-property_value: IAO:0000589 "6-month-old stage (cow)" xsd:string
property_value: start_mpb "6.0" xsd:float
[Term]
@@ -506,7 +490,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000025 ! 6-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "8.0" xsd:float
-property_value: IAO:0000589 "7-month-old stage (cow)" xsd:string
property_value: start_mpb "7.0" xsd:float
[Term]
@@ -519,7 +502,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000026 ! 7-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "9.0" xsd:float
-property_value: IAO:0000589 "8-month-old stage (cow)" xsd:string
property_value: start_mpb "8.0" xsd:float
[Term]
@@ -532,7 +514,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000027 ! 8-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "9-month-old stage (cow)" xsd:string
property_value: start_mpb "9.0" xsd:float
[Term]
@@ -545,7 +526,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000028 ! 9-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "11.0" xsd:float
-property_value: IAO:0000589 "10-month-old stage (cow)" xsd:string
property_value: start_mpb "10.0" xsd:float
[Term]
@@ -558,7 +538,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000029 ! 10-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "12.0" xsd:float
-property_value: IAO:0000589 "11-month-old stage (cow)" xsd:string
property_value: start_mpb "11.0" xsd:float
[Term]
@@ -571,7 +550,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000030 ! 11-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "13.0" xsd:float
-property_value: IAO:0000589 "12-month-old stage (cow)" xsd:string
property_value: start_mpb "12.0" xsd:float
[Term]
@@ -584,7 +562,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000031 ! 12-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "14.0" xsd:float
-property_value: IAO:0000589 "13-month-old stage (cow)" xsd:string
property_value: start_mpb "13.0" xsd:float
[Term]
@@ -597,7 +574,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000032 ! 13-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "15.0" xsd:float
-property_value: IAO:0000589 "14-month-old stage (cow)" xsd:string
property_value: start_mpb "14.0" xsd:float
[Term]
@@ -610,7 +586,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000033 ! 14-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "16.0" xsd:float
-property_value: IAO:0000589 "15-month-old stage (cow)" xsd:string
property_value: start_mpb "15.0" xsd:float
[Term]
@@ -623,7 +598,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000034 ! 15-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "17.0" xsd:float
-property_value: IAO:0000589 "16-month-old stage (cow)" xsd:string
property_value: start_mpb "16.0" xsd:float
[Term]
@@ -637,7 +611,6 @@ relationship: immediately_preceded_by BtauDv:0000035 ! 16-month-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_mpb "18.0" xsd:float
property_value: end_ypb "1.5" xsd:float
-property_value: IAO:0000589 "17-month-old stage (cow)" xsd:string
property_value: start_mpb "17.0" xsd:float
[Term]
@@ -650,7 +623,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000036 ! 17-month-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "19.0" xsd:float
-property_value: IAO:0000589 "18-month-old stage (cow)" xsd:string
property_value: start_mpb "18.0" xsd:float
[Term]
@@ -663,7 +635,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000037 ! 18-month-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "20.0" xsd:float
-property_value: IAO:0000589 "19-month-old stage (cow)" xsd:string
property_value: start_mpb "19.0" xsd:float
[Term]
@@ -676,7 +647,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000038 ! 19-month-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "21.0" xsd:float
-property_value: IAO:0000589 "20-month-old stage (cow)" xsd:string
property_value: start_mpb "20.0" xsd:float
[Term]
@@ -689,7 +659,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000039 ! 20-month-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "22.0" xsd:float
-property_value: IAO:0000589 "21-month-old stage (cow)" xsd:string
property_value: start_mpb "21.0" xsd:float
[Term]
@@ -702,7 +671,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000040 ! 21-month-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "23.0" xsd:float
-property_value: IAO:0000589 "22-month-old stage (cow)" xsd:string
property_value: start_mpb "22.0" xsd:float
[Term]
@@ -715,7 +683,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000041 ! 22-month-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "24.0" xsd:float
-property_value: IAO:0000589 "23-month-old stage (cow)" xsd:string
property_value: start_mpb "23.0" xsd:float
[Term]
@@ -729,7 +696,6 @@ relationship: immediately_preceded_by BtauDv:0000042 ! 23-month-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "36.0" xsd:float
property_value: end_ypb "3.0" xsd:float
-property_value: IAO:0000589 "2-year-old stage (cow)" xsd:string
property_value: start_mpb "24.0" xsd:float
property_value: start_ypb "2.0" xsd:float
@@ -743,7 +709,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000043 ! 2-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "4.0" xsd:float
-property_value: IAO:0000589 "3-year-old stage (cow)" xsd:string
property_value: start_ypb "3.0" xsd:float
[Term]
@@ -756,7 +721,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000044 ! 3-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "5.0" xsd:float
-property_value: IAO:0000589 "4-year-old stage (cow)" xsd:string
property_value: start_ypb "4.0" xsd:float
[Term]
@@ -769,7 +733,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000045 ! 4-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "6.0" xsd:float
-property_value: IAO:0000589 "5-year-old stage (cow)" xsd:string
property_value: start_ypb "5.0" xsd:float
[Term]
@@ -782,7 +745,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000046 ! 5-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "7.0" xsd:float
-property_value: IAO:0000589 "6-year-old stage (cow)" xsd:string
property_value: start_ypb "6.0" xsd:float
[Term]
@@ -795,7 +757,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000047 ! 6-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "8.0" xsd:float
-property_value: IAO:0000589 "7-year-old stage (cow)" xsd:string
property_value: start_ypb "7.0" xsd:float
[Term]
@@ -808,7 +769,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000048 ! 7-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "9.0" xsd:float
-property_value: IAO:0000589 "8-year-old stage (cow)" xsd:string
property_value: start_ypb "8.0" xsd:float
[Term]
@@ -821,7 +781,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000049 ! 8-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "10.0" xsd:float
-property_value: IAO:0000589 "9-year-old stage (cow)" xsd:string
property_value: start_ypb "9.0" xsd:float
[Term]
@@ -834,7 +793,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000050 ! 9-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "11.0" xsd:float
-property_value: IAO:0000589 "10-year-old stage (cow)" xsd:string
property_value: start_ypb "10.0" xsd:float
[Term]
@@ -847,7 +805,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000051 ! 10-year-old stage (cow)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "12.0" xsd:float
-property_value: IAO:0000589 "11-year-old stage (cow)" xsd:string
property_value: start_ypb "11.0" xsd:float
[Term]
@@ -861,7 +818,6 @@ relationship: immediately_preceded_by BtauDv:0000018 ! ninth and over month of g
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_dpb "7.0" xsd:float
property_value: end_wpb "1.0" xsd:float
-property_value: IAO:0000589 "first 0-6 postnatal days (cow)" xsd:string
property_value: start_dpb "0.0" xsd:float
property_value: start_wpb "0.0" xsd:float
@@ -877,7 +833,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000018 ! ninth and over month of gestation (cow)
relationship: part_of BtauDv:0000053 ! first 0-6 postnatal days (cow)
property_value: end_dpb "1.0" xsd:float
-property_value: IAO:0000589 "0-day-old stage (cow)" xsd:string
property_value: start_dpb "0.0" xsd:float
[Term]
@@ -891,7 +846,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000054 ! 0-day-old stage (cow)
relationship: part_of BtauDv:0000053 ! first 0-6 postnatal days (cow)
property_value: end_dpb "2.0" xsd:float
-property_value: IAO:0000589 "1-day-old stage (cow)" xsd:string
property_value: start_dpb "1.0" xsd:float
[Term]
@@ -905,7 +859,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000055 ! 1-day-old stage (cow)
relationship: part_of BtauDv:0000053 ! first 0-6 postnatal days (cow)
property_value: end_dpb "3.0" xsd:float
-property_value: IAO:0000589 "2-day-old stage (cow)" xsd:string
property_value: start_dpb "2.0" xsd:float
[Term]
@@ -919,7 +872,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000056 ! 2-day-old stage (cow)
relationship: part_of BtauDv:0000053 ! first 0-6 postnatal days (cow)
property_value: end_dpb "4.0" xsd:float
-property_value: IAO:0000589 "3-day-old stage (cow)" xsd:string
property_value: start_dpb "3.0" xsd:float
[Term]
@@ -933,7 +885,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000057 ! 3-day-old stage (cow)
relationship: part_of BtauDv:0000053 ! first 0-6 postnatal days (cow)
property_value: end_dpb "5.0" xsd:float
-property_value: IAO:0000589 "4-day-old stage (cow)" xsd:string
property_value: start_dpb "4.0" xsd:float
[Term]
@@ -947,7 +898,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000058 ! 4-day-old stage (cow)
relationship: part_of BtauDv:0000053 ! first 0-6 postnatal days (cow)
property_value: end_dpb "6.0" xsd:float
-property_value: IAO:0000589 "5-day-old stage (cow)" xsd:string
property_value: start_dpb "5.0" xsd:float
[Term]
@@ -961,7 +911,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000059 ! 5-day-old stage (cow)
relationship: part_of BtauDv:0000053 ! first 0-6 postnatal days (cow)
property_value: end_dpb "7.0" xsd:float
-property_value: IAO:0000589 "6-day-old stage (cow)" xsd:string
property_value: start_dpb "6.0" xsd:float
[Term]
@@ -975,7 +924,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000060 ! 6-day-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_wpb "2.0" xsd:float
-property_value: IAO:0000589 "1-week-old stage (cow)" xsd:string
property_value: start_wpb "1.0" xsd:float
[Term]
@@ -989,7 +937,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000061 ! 1-week-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_wpb "3.0" xsd:float
-property_value: IAO:0000589 "2-week-old stage (cow)" xsd:string
property_value: start_wpb "2.0" xsd:float
[Term]
@@ -1003,7 +950,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000062 ! 2-week-old stage (cow)
relationship: part_of UBERON:0000112 ! sexually immature stage
property_value: end_wpb "4.0" xsd:float
-property_value: IAO:0000589 "3-week-old stage (cow)" xsd:string
property_value: start_dpb "21.0" xsd:float
property_value: start_wpb "3.0" xsd:float
@@ -1018,7 +964,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000062 ! 2-week-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "22.0" xsd:float
-property_value: IAO:0000589 "21-day-old stage (cow)" xsd:string
property_value: start_dpb "21.0" xsd:float
property_value: start_wpb "3.0" xsd:float
@@ -1033,7 +978,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000064 ! 21-day-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "22.0" xsd:float
-property_value: IAO:0000589 "22-day-old stage (cow)" xsd:string
property_value: start_dpb "21.0" xsd:float
property_value: start_wpb "3.0" xsd:float
@@ -1048,7 +992,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000065 ! 22-day-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "22.0" xsd:float
-property_value: IAO:0000589 "23-day-old stage (cow)" xsd:string
property_value: start_dpb "21.0" xsd:float
property_value: start_wpb "3.0" xsd:float
@@ -1063,7 +1006,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000066 ! 23-day-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "22.0" xsd:float
-property_value: IAO:0000589 "24-day-old stage (cow)" xsd:string
property_value: start_dpb "21.0" xsd:float
property_value: start_wpb "3.0" xsd:float
@@ -1078,7 +1020,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000067 ! 24-day-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "22.0" xsd:float
-property_value: IAO:0000589 "25-day-old stage (cow)" xsd:string
property_value: start_dpb "21.0" xsd:float
property_value: start_wpb "3.0" xsd:float
@@ -1093,7 +1034,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000068 ! 25-day-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "27.0" xsd:float
-property_value: IAO:0000589 "26-day-old stage (cow)" xsd:string
property_value: start_dpb "26.0" xsd:float
[Term]
@@ -1107,7 +1047,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000069 ! 26-day-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "28.0" xsd:float
-property_value: IAO:0000589 "27-day-old stage (cow)" xsd:string
property_value: start_dpb "27.0" xsd:float
[Term]
@@ -1121,7 +1060,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000070 ! 27-day-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "29.0" xsd:float
-property_value: IAO:0000589 "28-day-old stage (cow)" xsd:string
property_value: start_dpb "28.0" xsd:float
[Term]
@@ -1135,7 +1073,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000071 ! 28-day-old stage (cow)
relationship: part_of BtauDv:0000063 ! 3-week-old stage (cow)
property_value: end_dpb "30.0" xsd:float
-property_value: IAO:0000589 "29-day-old stage (cow)" xsd:string
property_value: start_dpb "29.0" xsd:float
[Term]
@@ -1149,7 +1086,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000063 ! 3-week-old stage (cow)
relationship: part_of BtauDv:0000020 ! 1-month-old stage (cow)
property_value: end_wpb "5.0" xsd:float
-property_value: IAO:0000589 "4-week-old stage (cow)" xsd:string
property_value: start_wpb "4.0" xsd:float
[Term]
@@ -1163,7 +1099,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000073 ! 4-week-old stage (cow)
relationship: part_of BtauDv:0000020 ! 1-month-old stage (cow)
property_value: end_wpb "6.0" xsd:float
-property_value: IAO:0000589 "5-week-old stage (cow)" xsd:string
property_value: start_wpb "5.0" xsd:float
[Term]
@@ -1177,7 +1112,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000074 ! 5-week-old stage (cow)
relationship: part_of BtauDv:0000020 ! 1-month-old stage (cow)
property_value: end_wpb "5.0" xsd:float
-property_value: IAO:0000589 "6-week-old stage (cow)" xsd:string
property_value: start_wpb "4.0" xsd:float
[Term]
@@ -1191,7 +1125,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by BtauDv:0000075 ! 6-week-old stage (cow)
relationship: part_of BtauDv:0000020 ! 1-month-old stage (cow)
property_value: end_wpb "8.0" xsd:float
-property_value: IAO:0000589 "7-week-old stage (cow)" xsd:string
property_value: start_wpb "7.0" xsd:float
[Term]
@@ -1204,7 +1137,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of BtauDv:0000075 ! 6-week-old stage (cow)
property_value: end_dpb "43.0" xsd:float
-property_value: IAO:0000589 "42-day-old stage (cow)" xsd:string
property_value: start_dpb "42.0" xsd:float
[Term]
@@ -1620,8 +1552,8 @@ namespace: chebi_ontology
subset: 3_STAR
synonym: ">C=O" RELATED [IUPAC]
synonym: "carbonyl" EXACT IUPAC_NAME [IUPAC]
-synonym: "carbonyl group" EXACT [UniProt]
synonym: "carbonyl group" EXACT [ChEBI]
+synonym: "carbonyl group" EXACT [UniProt]
is_a: CHEBI:51422 ! organodiyl group
[Term]
@@ -3854,7 +3786,7 @@ intersection_of: CL:0000000 ! cell
intersection_of: capable_of GO:0017145 ! stem cell division
relationship: capable_of GO:0017145 ! stem cell division
relationship: in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
+relationship: present_in_taxon NCBITaxon:9606
[Term]
id: CL:0000052
@@ -3881,6 +3813,7 @@ is_a: CL:0011115 ! precursor cell
id: CL:0000056
name: myoblast
def: "A cell that is commited to differentiating into a muscle cell. Embryonic myoblasts develop from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes. Myoblasts also occur as transient populations of cells in muscles undergoing repair." [GOC:tfm, MESH:D032446, PMID:21849021]
+subset: cellxgene_subset
xref: BTO:0000222
xref: CALOHA:TS-0650
xref: FBbt:00005083 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
@@ -3906,7 +3839,7 @@ xref: WBbt:0003672
xref: ZFA:0009034 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
is_a: CL:0000255 ! eukaryotic cell
relationship: part_of UBERON:0000483 ! epithelium
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
+relationship: present_in_taxon NCBITaxon:9606
property_value: depiction "https://www.swissbiopics.org/api/image/Epithelial_cells.svg" xsd:anyURI
[Term]
@@ -3967,6 +3900,7 @@ is_a: CL:0000000 ! cell
id: CL:0000221
name: ectodermal cell
def: "A cell of the outer of the three germ layers of the embryo." [MESH:D004475]
+subset: cellxgene_subset
synonym: "ectoderm cell" EXACT []
xref: FMA:72549
xref: ZFA:0009137 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
@@ -3982,10 +3916,12 @@ subset: cellxgene_subset
synonym: "mesoblast" EXACT []
synonym: "mesoderm cell" EXACT []
xref: FMA:72554
+xref: https://cellxgene.cziscience.com/cellguide/CL_0000222
xref: ZFA:0009138 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
is_a: CL:0000255 ! eukaryotic cell
is_a: CL:0002321 ! embryonic cell (metazoa)
relationship: part_of UBERON:0000926 ! mesoderm
+property_value: terms:description "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies only to some subtypes and species, and so should not be considered definitional.\n\nMesodermal cells are pluripotent and the most abundant in the human body. They contribute to the development of several structures such as the skeletal muscles, bones, heart and blood vessels, kidneys, gonads, connective tissues, and certain layers of the skin. Hence, the mesoderm is often regarded as an active and diverse layer due to its role in forming many bodily structures. \nIn embryonic development, these cells are instrumental, contributing to the body's structures through a carefully coordinated sequence of morphogenetic movements. This process forms the complex multicellular architecture of tissues and organs from a simple ball of cells. Without the function of mesodermal cells, the body's integral structures and systems would cease to form correctly, leading to developmental disorders such as axial mesodermal dysplasia complex" xsd:string {xref="DOI:10.1016/j.ceb.2019.07.012", xref="DOI:10.5535/arm.2016.40.1.162", xref="https://www.sciencedirect.com/topics/biochemistry-genetics-and-molecular-biology/mesoderm"}
[Term]
id: CL:0000223
@@ -4002,7 +3938,6 @@ relationship: part_of UBERON:0000925 ! endoderm
id: CL:0000255
name: eukaryotic cell
def: "Any cell that in taxon some Eukaryota." [FBC:Autogenerated]
-subset: cellxgene_subset
xref: MESH:D005057
is_a: CL:0000000 ! cell
intersection_of: CL:0000000 ! cell
@@ -4064,7 +3999,7 @@ is_a: CL:0000393 ! electrically responsive cell
is_a: CL:0000404 ! electrically signaling cell
is_a: CL:0002319 ! neural cell
relationship: capable_of GO:0019226 ! transmission of nerve impulse
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
+relationship: present_in_taxon NCBITaxon:9606
property_value: depiction "https://www.swissbiopics.org/api/image/Neuron_cells.svg" xsd:anyURI
[Term]
@@ -4127,10 +4062,12 @@ name: embryonic cell (metazoa)
def: "A cell of the embryo." [FMA:0618947256]
xref: CALOHA:TS-0263
xref: FMA:82840
+xref: https://cellxgene.cziscience.com/cellguide/CL_0002321
xref: WBbt:0007028
xref: ZFA:0007089 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
is_a: CL:0000000 ! cell
relationship: dc-contributor https://orcid.org/0000-0003-1980-3228
+property_value: terms:description "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies only to some subtypes and species, and so should not be considered definitional.\n\nEmbryonic cells in metazoans, which include all multicellular animals, are biological units in their earliest developmental stages from conception until the organism is fully formed. \nThey are derived from a fertilized egg, which undergoes a series of cell divisions to produce a multicellular organism. During the early phases of embryonic development, these cells exhibit pluripotency, meaning they possess the potential to differentiate into a diverse array of specialized cell types that constitute different body tissues and structures. \nThe balance between cell proliferation and differentiation in embryonic cells is crucial for successful development. When cells continue to divide without differentiating, overgrowth may occur leading to conditions such as teratomas (tumors of embryonic cells). Conversely, if cell differentiation proceeds at the expense of cell proliferation, developmental anomalies could occur regarding size or mass of the organism or its parts." xsd:string {xref="DOI:10.1002/iub.1404", xref="DOI:10.1093/molehr/gan048", xref="https://www.ncbi.nlm.nih.gov/books/NBK9906/"}
creation_date: 2010-09-15T03:39:21Z
[Term]
@@ -4166,106 +4103,72 @@ is_a: UBERON:0000066 ! fully formed stage
[Term]
id: DpseDv:0000006
-name: days 1-4 of fully formed stage (Drosophila pseudobscura)
+name: days 1-4 of fully formed stage (D pseudobscura)
namespace: Dpseudobscura_developmental_stage
def: "The stage of Drosophila pseudobscura life-cycle from eclosion to the 4th day post-eclosion." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000066 ! fully formed stage
property_value: end_dph "5.0" xsd:float
-property_value: IAO:0000589 "days 1-4 of fully formed stage (Drosophila pseudobscura)" xsd:string
property_value: start_dph "0.0" xsd:float
[Term]
id: DpseDv:0000007
-name: days 5-8 of fully formed stage (Drosophila pseudobscura)
+name: days 5-8 of fully formed stage (D pseudobscura)
namespace: Dpseudobscura_developmental_stage
def: "The stage of Drosophila pseudobscura life-cycle from the 5th day post-eclosion to 8th day post-eclosion." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by DpseDv:0000006 ! days 1-4 of fully formed stage (Drosophila pseudobscura)
+relationship: immediately_preceded_by DpseDv:0000006 ! days 1-4 of fully formed stage (D pseudobscura)
relationship: part_of UBERON:0000066 ! fully formed stage
property_value: end_dph "9.0" xsd:float
-property_value: IAO:0000589 "days 5-8 of fully formed stage (Drosophila pseudobscura)" xsd:string
property_value: start_dph "5.0" xsd:float
[Term]
id: DpseDv:0000008
-name: day 9 and more of fully formed stage (Drosophila pseudobscura)
+name: day 9 and more of fully formed stage (D pseudobscura)
namespace: Dpseudobscura_developmental_stage
def: "The stage of Drosophila pseudobscura life-cycle from the 9th day post-eclosion to death." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by DpseDv:0000007 ! days 5-8 of fully formed stage (Drosophila pseudobscura)
+relationship: immediately_preceded_by DpseDv:0000007 ! days 5-8 of fully formed stage (D pseudobscura)
relationship: part_of UBERON:0000066 ! fully formed stage
-property_value: IAO:0000589 "day 9 and more of fully formed stage (Drosophila pseudobscura)" xsd:string
property_value: start_dph "9.0" xsd:float
[Term]
id: DsimDv:0000006
-name: days 1-4 of fully formed stage (Drosophila simulans)
+name: days 1-4 of fully formed stage (D simulans)
namespace: Dsimulans_developmental_stage
def: "The stage of Drosophila simulans life-cycle from eclosion to the 4th day post-eclosion." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000066 ! fully formed stage
property_value: end_dph "5.0" xsd:float
-property_value: IAO:0000589 "days 1-4 of fully formed stage (Drosophila simulans)" xsd:string
property_value: start_dph "0.0" xsd:float
[Term]
id: DsimDv:0000007
-name: days 5-8 of fully formed stage (Drosophila simulans)
+name: days 5-8 of fully formed stage (D simulans)
namespace: Dsimulans_developmental_stage
def: "The stage of Drosophila simulans life-cycle from the 5th day post-eclosion to 8th day post-eclosion." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by DsimDv:0000006 ! days 1-4 of fully formed stage (Drosophila simulans)
+relationship: immediately_preceded_by DsimDv:0000006 ! days 1-4 of fully formed stage (D simulans)
relationship: part_of UBERON:0000066 ! fully formed stage
property_value: end_dph "9.0" xsd:float
-property_value: IAO:0000589 "days 5-8 of fully formed stage (Drosophila simulans)" xsd:string
property_value: start_dph "5.0" xsd:float
[Term]
id: DsimDv:0000008
-name: day 9 and more of fully formed stage (Drosophila simulans)
+name: day 9 and more of fully formed stage (D simulans)
namespace: Dsimulans_developmental_stage
def: "The stage of Drosophila simulans life-cycle from the 9th day post-eclosion to death." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by DsimDv:0000007 ! days 5-8 of fully formed stage (Drosophila simulans)
+relationship: immediately_preceded_by DsimDv:0000007 ! days 5-8 of fully formed stage (D simulans)
relationship: part_of UBERON:0000066 ! fully formed stage
-property_value: IAO:0000589 "day 9 and more of fully formed stage (Drosophila simulans)" xsd:string
property_value: start_dph "9.0" xsd:float
-[Term]
-id: FBdv:00000000
-name: Drosophila life
-namespace: FlyBase_development_CV
-alt_id: FBdv_root:00000000
-def: "The life of an individual of the species Drosophila melanogaster, from fertilization to death." [FBC:DOS]
-synonym: "Drosophila life cycle" EXACT []
-is_a: UBERON:0000104 ! life cycle
-intersection_of: UBERON:0000104 ! life cycle
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-property_value: IAO:0000589 "life cycle (drosophila)" xsd:string
-
-[Term]
-id: FBdv:00000054
-name: cleavage stage
-namespace: FlyBase_development_CV
-def: "Stage during which the nucleus of the fertilized egg performs 13 rapid divisions, prior to cellularization (Hartenstein, 1993; Campos-Ortega and Hartenstein, 1997). The first seven divisions are synchronous (Campos-Ortega and Hartenstein, 1997). During the course of the subsequent three divisions, most of the nuclei approach the surface and then divide asynchronously a further three times, bringing the total number of cells to around 5000 (Campos-Ortega and Hartenstein, 1997). This corresponds to embryonic stages 1-4 (Hartenstein, 1993)." [FlyBase:FBrf0064803, FlyBase:FBrf0089570]
-comment: Temporal ordering number - 25.
-subset: life_stage
-is_a: FBdv:00007012 ! life stage
-is_a: UBERON:0000107 ! cleavage stage
-intersection_of: UBERON:0000107 ! cleavage stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: FBdv:00018001 FBdv:00005289 ! substage of embryonic stage
-relationship: immediately_preceded_by FBdv:00005288 ! fertilized egg stage
-property_value: IAO:0000589 "cleavage stage (drosophila)" xsd:string
-
[Term]
id: FBdv:00004450
name: late extended germ band stage
@@ -4277,16 +4180,6 @@ relationship: FBdv:00018001 FBdv:00005321 ! substage of extended germ band stage
relationship: immediately_preceded_by FBdv:00005324 ! embryonic stage 10
relationship: immediately_preceded_by FBdv:00014201 ! early extended germ band stage
-[Term]
-id: FBdv:00004886
-name: oogenesis
-namespace: FlyBase_development_CV
-def: "The complete process of formation and maturation of an ovum or female gemate from a primordial female germ cell." [GO:0048477]
-comment: Temporal ordering number - 10000.
-synonym: "oogenesis stage" EXACT []
-xref: GO:0048477
-is_a: FBdv:00007009 ! developmental process
-
[Term]
id: FBdv:00005259
name: developmental stage
@@ -4297,309 +4190,6 @@ is_a: BFO:0000003 ! occurrent
relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
property_value: dcterms-date "2009-10-01T05:56:56Z" xsd:string
-[Term]
-id: FBdv:00005261
-name: oogenesis stage S1
-namespace: FlyBase_development_CV
-def: "Earliest stage of ovarian cyst development - lasts while the 16 cell cyst is within the germarium (region 3)." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10010.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-
-[Term]
-id: FBdv:00005262
-name: oogenesis stage S2
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when the cyst leaves the germarium (from this point the cyst is referred to as an egg chamber). During this stage, polyploidation of the nurse cells begins, they reach a ploidy of 8C, and follicle cells start to divide." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10020.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005261 ! oogenesis stage S1
-
-[Term]
-id: FBdv:00005263
-name: oogenesis stage S3
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when the oocyte chromosomes condense into a karyosome attached to a distinctive spherical structure known as an endobody. The oocyte nucleolus disappears completely. During this stage, nurse cell ploidy reaches 16C." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10030.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005262 ! oogenesis stage S2
-
-[Term]
-id: FBdv:00005264
-name: oogenesis stage S4
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when the nurse cells chromosomes become bulbous. Nurse cell chromosomes during this stage are polytene and reach a ploidy of 32C. The egg chamber is oval shaped." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10040.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005263 ! oogenesis stage S3
-
-[Term]
-id: FBdv:00005265
-name: oogenesis stage S5
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when nurse cell chromosomes are no longer bulbous - the association between homologs weakens so that these chromosomes no longer have a polytene structure. During this stage, posterior nurse cell nuclei have a higher ploidy (64C) than anterior ones." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10050.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005264 ! oogenesis stage S4
-
-[Term]
-id: FBdv:00005266
-name: oogenesis stage S6
-namespace: FlyBase_development_CV
-def: "Oogenesis stage during which follicle cell division ceases." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10060.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005265 ! oogenesis stage S5
-
-[Term]
-id: FBdv:00005267
-name: oogenesis stage S7
-namespace: FlyBase_development_CV
-def: "Oogenesis stage during which polyploidation and enlargement of follicle cells begins. Nurse cell ploidy ranges from 256C (anterior) to 512C (posterior) and the egg chamber gains an elongated shape." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10070.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005266 ! oogenesis stage S6
-
-[Term]
-id: FBdv:00005268
-name: oogenesis stage S8
-namespace: FlyBase_development_CV
-def: "Oogenesis stage which begins when yolk first appears in the oocyte. Follicle cell migration over the oocyte begins during this stage (although mostly occurs during stage 9)." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10080.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005267 ! oogenesis stage S7
-
-[Term]
-id: FBdv:00005269
-name: oogenesis stage S9
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when the border cells begin to migrate. During this stage: the oocyte is about 1/3 the length of the egg chamber with its nucleus located antero-dorsally; follicle cell migration results in an anterior to posterior gradient of follicle cell thickness with posterior cells being thicker (-> columnar) and posterior cells thinner ( -> squamous); border cell migration begins and ends; secretion of vitelline membrane begins." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10090.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005268 ! oogenesis stage S8
-
-[Term]
-id: FBdv:00005270
-name: oogenesis stage S10
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when all the oocyte associated follicular epithelium is columnar and all of the nurse cell associated follicular epithelium is completely squamous and ends with the beginning of nurse cell dumping." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10100.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005269 ! oogenesis stage S9
-
-[Term]
-id: FBdv:00005271
-name: oogenesis stage S10A
-namespace: FlyBase_development_CV
-def: "Oogenesis stage which begins when all the oocyte associated follicular epithelium is columnar and all of the nurse cell associated follicular epithelium is completely squamous and ends when centripetal follicle migration begins. During this stage, the migrating border cells reach the oocyte. The oocyte is about 50% egg chamber length." [FlyBase:FBrf0021038, FlyBase:FBrf0034074]
-comment: Temporal ordering number - 10110.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005270 ! substage of oogenesis stage S10
-relationship: immediately_preceded_by FBdv:00005269 ! oogenesis stage S9
-
-[Term]
-id: FBdv:00005272
-name: oogenesis stage S10B
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when the centripetal follicle cells begin to migrate. As a result, the vitelline membrane extends into the opercular region. This stage ends when nurse cell dumping begins." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10120.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005270 ! substage of oogenesis stage S10
-relationship: immediately_preceded_by FBdv:00005271 ! oogenesis stage S10A
-
-[Term]
-id: FBdv:00005273
-name: oogenesis stage S11
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when nurse cell dumping begins and development of the wax layer begins. The dorsal appendages begin to form during this stage. This stage ends when dying nurse cells form an anterior cap to the oocyte." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0043885, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10130.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005270 ! oogenesis stage S10
-relationship: immediately_preceded_by FBdv:00005272 ! oogenesis stage S10B
-
-[Term]
-id: FBdv:00005274
-name: oogenesis stage S12
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when dying nurse cells form an anterior cap to the oocyte. Shortly after this, nurse cell dumping and growth of the oocyte are complete. Elongation of the dorsal appendages and formation of the innermost chorionic layer and endochorion begins during this stage." [FlyBase:FBrf0021038, FlyBase:FBrf0034074, FlyBase:FBrf0043885, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10160.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005273 ! oogenesis stage S11
-
-[Term]
-id: FBdv:00005275
-name: oogenesis stage S12A
-namespace: FlyBase_development_CV
-def: "Innermost chorionic layer and endochorion begin to form in the anterior of the follicle." [FlyBase:FBrf0043885]
-comment: Temporal ordering number - 10170.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005274 ! substage of oogenesis stage S12
-relationship: immediately_preceded_by FBdv:00005273 ! oogenesis stage S11
-
-[Term]
-id: FBdv:00005276
-name: oogenesis stage S12B
-namespace: FlyBase_development_CV
-def: "Secretion of innermost chorionic layer and endochorion begins in the main follicle cells." [FlyBase:FBrf0043885]
-comment: Temporal ordering number - 10180.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005274 ! substage of oogenesis stage S12
-relationship: immediately_preceded_by FBdv:00005275 ! oogenesis stage S12A
-
-[Term]
-id: FBdv:00005277
-name: oogenesis stage S12C
-namespace: FlyBase_development_CV
-def: "Formation of specialized endochorion structures in the anterior of the follicle: branches in the developing dorsal appendages; compact endochorion lacking the pillars seen in the rest of the follicle." [FlyBase:FBrf0021038]
-comment: Temporal ordering number - 10190.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005274 ! substage of oogenesis stage S12
-relationship: immediately_preceded_by FBdv:00005276 ! oogenesis stage S12B
-
-[Term]
-id: FBdv:00005278
-name: oogenesis stage S13
-namespace: FlyBase_development_CV
-def: "Oogenesis stage that begins when the micropyle begins to form. At the beginning of this stage, about 12-15 nurse cell nuclei remain at the anterior of the oocyte. By the end of this stage, none of these nuclei remain. Oocyte meiosis up to arrest at full metaphase I occurs during this stage." [FlyBase:FBrf0021038, FlyBase:FBrf0029744, FlyBase:FBrf0034074, FlyBase:FBrf0064777]
-comment: Temporal ordering number - 10200.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005274 ! oogenesis stage S12
-relationship: immediately_preceded_by FBdv:00005277 ! oogenesis stage S12C
-
-[Term]
-id: FBdv:00005279
-name: oogenesis stage S13A
-namespace: FlyBase_development_CV
-def: "Oogenesis stage during which 12-15 nurse cell nuclei remain at the anterior of the oocyte. At this stage, the oocyte nucleus has reached its maximum volume and its chromosomes are compressed into a 5-7 micrometer karyosome." [FlyBase:FBrf0029744]
-comment: Temporal ordering number - 10210. An alternative division of stage 13 into two sub-stages, A and B, has been defined on the basis of chorion development (see FBrf0043885). This ontology uses an alternative subdivision based on nurse cell nucleus number and oocyte meiosis, as the former at least, is easier to score than chorion ultrastructure.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005278 ! substage of oogenesis stage S13
-relationship: immediately_preceded_by FBdv:00005277 ! oogenesis stage S12C
-
-[Term]
-id: FBdv:00005280
-name: oogenesis stage S13B
-namespace: FlyBase_development_CV
-def: "Oogenesis stage during which 9-11 nurse cell nuclei remain at the anterior of the oocyte. During this stage, the nuclear membrane of the oocyte nucleus disappears, indicating the start of meiotic pro-metaphase." [FlyBase:FBrf0029744]
-comment: Temporal ordering number - 10220. An alternative division of stage 13 into two sub-stages, A and B, has been defined on the basis of chorion development (see FBrf0043885). This ontology uses an alternative subdivision based on nurse cell nucleus number and oocyte meiosis, as the former at least, is easier to score than chorion ultrastructure.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005278 ! substage of oogenesis stage S13
-relationship: immediately_preceded_by FBdv:00005279 ! oogenesis stage S13A
-
-[Term]
-id: FBdv:00005281
-name: oogenesis stage S13C
-namespace: FlyBase_development_CV
-def: "Oogenesis stage during which only 7-8 nurse cell nuclei remain at the anterior of the oocyte. At the beginning of this stage, oocyte chromosome bivalents separate from each other - indicating mid-prometaphase of oocyte meiosis." [FlyBase:FBrf0029744]
-comment: Temporal ordering number - 10230.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005278 ! substage of oogenesis stage S13
-relationship: immediately_preceded_by FBdv:00005280 ! oogenesis stage S13B
-
-[Term]
-id: FBdv:00005282
-name: oogenesis stage S13D
-namespace: FlyBase_development_CV
-def: "Oogenesis stage during which only 5-6 nurse cell nuclei remain at the anterior of the oocyte. The oocyte nucleus is in late prometaphase:the bivalents arrange themselves in on the equatorial plane of the spindle; homologous centromeres are pulled towards the poles." [FlyBase:FBrf0029744]
-comment: Temporal ordering number - 10240.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005278 ! substage of oogenesis stage S13
-relationship: immediately_preceded_by FBdv:00005281 ! oogenesis stage S13C
-
-[Term]
-id: FBdv:00005283
-name: oogenesis stage S14
-namespace: FlyBase_development_CV
-def: "The last stage of oogenesis. This stage begins when no nurse cell nuclei remain at the anterior of the egg (chamber). Exochorion formation and secretion occurs during this stage. The dorsal appendages complete their elongation and the follicle cells die." [FlyBase:FBrf0043885]
-comment: Temporal ordering number - 10260.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00004886 ! substage of oogenesis
-relationship: immediately_preceded_by FBdv:00005278 ! oogenesis stage S13
-relationship: immediately_preceded_by FBdv:00005282 ! oogenesis stage S13D
-
-[Term]
-id: FBdv:00005284
-name: oogenesis stage S14A
-namespace: FlyBase_development_CV
-def: "Secretion and formation of the outer endochorionic network by throughout the follicle. Crystallization of the innermost chorionic layer of the main body follicle cells." [FlyBase:FBrf0021038, FlyBase:FBrf0043885]
-comment: Temporal ordering number - 10270.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005283 ! substage of oogenesis stage S14
-relationship: immediately_preceded_by FBdv:00005282 ! oogenesis stage S13D
-
-[Term]
-id: FBdv:00005285
-name: oogenesis stage S14B
-namespace: FlyBase_development_CV
-def: "Secretion of the exochorion begins and ends." [FlyBase:FBrf0021038, FlyBase:FBrf0043885]
-comment: Temporal ordering number - 10280.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005283 ! substage of oogenesis stage S14
-relationship: immediately_preceded_by FBdv:00005284 ! oogenesis stage S14A
-
-[Term]
-id: FBdv:00005286
-name: egg stage
-namespace: FlyBase_development_CV
-def: "The stage of the Drosophila life-cycle from maturation of an egg to the end of fertilization. At the beginning of this stage, the nucleus is arrested in meiotic metaphase I. The completion of meiosis and the start of protein synthesis are triggered by ovulation. If the female has already mated, fertilization begins during meiosis." [FlyBase:FBrf0064779]
-comment: Temporal ordering number - 10290.
-is_a: FBdv:00005259 ! developmental stage
-
-[Term]
-id: FBdv:00005287
-name: unfertilized egg stage
-namespace: FlyBase_development_CV
-def: "Developmental stage that starts with ovulation, at the end of oogenesis, until the egg is fertilized by a sperm." [FlyBase:FBrf0158848]
-comment: Temporal ordering number - 10300.
-is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005286 ! substage of egg stage
-relationship: immediately_preceded_by FBdv:00005283 ! oogenesis stage S14
-relationship: immediately_preceded_by FBdv:00005285 ! oogenesis stage S14B
-
-[Term]
-id: FBdv:00005288
-name: fertilized egg stage
-namespace: FlyBase_development_CV
-def: "Developmental stage that starts with sperm entry until the first mitotic division of the zygote." [FlyBase:FBrf0229233]
-comment: Temporal ordering number - 10.
-subset: life_stage
-is_a: FBdv:00007012 ! life stage
-is_a: UBERON:0000106 ! zygote stage
-intersection_of: UBERON:0000106 ! zygote stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: FBdv:00018001 FBdv:00005286 ! substage of egg stage
-relationship: FBdv:00018001 FBdv:00005289 ! substage of embryonic stage
-relationship: immediately_preceded_by FBdv:00005287 ! unfertilized egg stage
-property_value: IAO:0000589 "zygote stage (drosophila)" xsd:string
-
-[Term]
-id: FBdv:00005289
-name: embryonic stage
-namespace: FlyBase_development_CV
-def: "Life stage that begins with a fertilized egg, and finishes with hatching at the end of embryonic stage 17 (Campos-Ortega and Hartenstein, 1997)." [FlyBase:FBrf0089570]
-comment: Temporal ordering number - 20.
-subset: life_stage
-is_a: FBdv:00007012 ! life stage
-is_a: UBERON:0000068 ! embryo stage
-intersection_of: UBERON:0000068 ! embryo stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: immediately_preceded_by FBdv:00005287 ! unfertilized egg stage
-relationship: RO:0002090 FBdv:00005336 ! immediately precedes larval stage
-relationship: RO:0002090 FBdv:00005337 ! immediately precedes first instar larval stage
-property_value: IAO:0000589 "embryo stage (drosophila)" xsd:string
-
[Term]
id: FBdv:00005290
name: pre-blastoderm stage
@@ -4608,8 +4198,6 @@ def: "Stage prior to the formation of the syncitial blastoderm, including the fi
comment: Temporal ordering number - 30.
synonym: "pre-blastoderm" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00000054 ! substage of cleavage stage
-relationship: immediately_preceded_by FBdv:00005288 ! fertilized egg stage
[Term]
id: FBdv:00005291
@@ -4619,7 +4207,6 @@ def: "The embryonic stage that lasts from the end of fertilization to the end of
comment: Temporal ordering number - 40.
is_a: FBdv:00005259 ! developmental stage
relationship: FBdv:00018001 FBdv:00005290 ! substage of pre-blastoderm stage
-relationship: immediately_preceded_by FBdv:00005288 ! fertilized egg stage
[Term]
id: FBdv:00005292
@@ -4629,7 +4216,6 @@ def: "The first mitotic cell cycle of embryogenesis. This occurs synchronously a
comment: Temporal ordering number - 50.
is_a: FBdv:00007011 ! embryonic cycle
relationship: FBdv:00018001 FBdv:00005291 ! substage of embryonic stage 1
-relationship: immediately_preceded_by FBdv:00005288 ! fertilized egg stage
[Term]
id: FBdv:00005293
@@ -4742,7 +4328,6 @@ def: "Stage during which most of the nuclei are arranged as a monolayer at the c
comment: Temporal ordering number - 160.
synonym: "blastoderm" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005289 ! substage of embryonic stage
relationship: immediately_preceded_by FBdv:00005290 ! pre-blastoderm stage
relationship: immediately_preceded_by FBdv:00005301 ! embryonic stage 3
@@ -4768,27 +4353,8 @@ comment: Temporal ordering number - 210.
synonym: "cellular blastoderm stage" EXACT [FlyBase:FBrf0089570]
is_a: FBdv:00005259 ! developmental stage
relationship: FBdv:00018001 FBdv:00005304 ! substage of blastoderm stage
-relationship: immediately_preceded_by FBdv:00000054 ! cleavage stage
relationship: immediately_preceded_by FBdv:00005306 ! embryonic stage 4
-[Term]
-id: FBdv:00005317
-name: gastrula stage
-namespace: FlyBase_development_CV
-def: "Stage during which gastrulation occurs. During this stage, cells from the polar caps and the mid-ventral part of the blastoderm invaginate and ultimately generate the germ layers (Hartenstein, 1993). This encompasses embryonic stages 6-8 (Hartenstein, 1993)." [FlyBase:FBrf0064803]
-comment: Temporal ordering number - 220.
-subset: life_stage
-synonym: "gastrula" EXACT []
-synonym: "gastrulation stage" EXACT []
-is_a: FBdv:00007012 ! life stage
-is_a: UBERON:0000109 ! gastrula stage
-intersection_of: UBERON:0000109 ! gastrula stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: FBdv:00018001 FBdv:00005289 ! substage of embryonic stage
-relationship: immediately_preceded_by FBdv:00005304 ! blastoderm stage
-relationship: immediately_preceded_by FBdv:00005311 ! embryonic stage 5
-property_value: IAO:0000589 "gastrula stage (drosophila)" xsd:string
-
[Term]
id: FBdv:00005318
name: embryonic stage 6
@@ -4796,7 +4362,6 @@ namespace: FlyBase_development_CV
def: "Stage 6 begins when the ventral furrow becomes apparent, an event which is followed rapidly by the formation of the cephalic furrow. Stage 6 ends when the pole cells have adopted a dorsal (horizontal) position at the posterior. Duration at 25 degrees C: approximately 10 minutes (170-180 minutes after egg laying)." [FlyBase:FBrf0089570]
comment: Temporal ordering number - 230.
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005317 ! substage of gastrula stage
relationship: immediately_preceded_by FBdv:00005304 ! blastoderm stage
relationship: immediately_preceded_by FBdv:00005311 ! embryonic stage 5
@@ -4807,7 +4372,6 @@ namespace: FlyBase_development_CV
def: "Stage 7 begins when the pole cells have adopted a dorsal (horizontal) position at the posterior. Invagination of the anterior and posterior midgut and hindgut follows. The 'discoid plate' that carries the pole cells forms a pocket. Transverse furrows (dorsal folds) form on the dorsal surface. This stage ends when the anterior wall of the amnioproctodeal invagination starts moving anteriorly and the pole cells are no longer visible externally. Duration at 25 degrees C: approximately 10 minutes (180-190 minutes after egg laying)." [FlyBase:FBrf0089570]
comment: Temporal ordering number - 240.
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005317 ! substage of gastrula stage
relationship: immediately_preceded_by FBdv:00005318 ! embryonic stage 6
[Term]
@@ -4817,8 +4381,6 @@ namespace: FlyBase_development_CV
def: "Stages during which the germ band is extended - 9-12." [FBC:DOS, FlyBase:FBrf0229323]
comment: Temporal ordering number - 260.
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005289 ! substage of embryonic stage
-relationship: immediately_preceded_by FBdv:00005317 ! gastrula stage
relationship: immediately_preceded_by FBdv:00005322 ! embryonic stage 8
[Term]
@@ -4829,7 +4391,6 @@ def: "Stage 8 starts with the rapid phase of germ band extension and ends with t
comment: Temporal ordering number - 250.
synonym: "rapidly extending germ band stage" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005317 ! substage of gastrula stage
relationship: immediately_preceded_by FBdv:00005319 ! embryonic stage 7
[Term]
@@ -4840,7 +4401,6 @@ def: "Stage 9 begins when mesodermal segmentation becomes (transiently) visible,
comment: Temporal ordering number - 280.
is_a: FBdv:00005259 ! developmental stage
relationship: FBdv:00018001 FBdv:00014201 ! substage of early extended germ band stage
-relationship: immediately_preceded_by FBdv:00005317 ! gastrula stage
relationship: immediately_preceded_by FBdv:00005322 ! embryonic stage 8
[Term]
@@ -4906,7 +4466,6 @@ namespace: FlyBase_development_CV
def: "Stage following germ band retraction, during which dorsal closure happens (Hartenstein, 1993). Dorsal closure occurs by extension of the dorsal epidermal primordium on either side, leading to fusion at the dorsal midline (Campos-Ortega and Hartenstein, 1997). This corresponds to embryonic stages 13-15 (Hartenstein, 1993; Campos-Ortega and Hartenstein, 1997)." [FlyBase:FBrf0064803, FlyBase:FBrf0089570]
comment: Temporal ordering number - 330.
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005289 ! substage of embryonic stage
relationship: immediately_preceded_by FBdv:00004450 ! late extended germ band stage
relationship: immediately_preceded_by FBdv:00005321 ! extended germ band stage
relationship: immediately_preceded_by FBdv:00005327 ! embryonic stage 12
@@ -4921,22 +4480,6 @@ is_a: FBdv:00005259 ! developmental stage
relationship: FBdv:00018001 FBdv:00005331 ! substage of dorsal closure stage
relationship: immediately_preceded_by FBdv:00005330 ! embryonic stage 14
-[Term]
-id: FBdv:00005333
-name: late embryonic stage
-namespace: FlyBase_development_CV
-def: "Embryonic stages 16-17." [FBC:DOS]
-comment: Temporal ordering number - 370.
-subset: life_stage
-is_a: FBdv:00007012 ! life stage
-is_a: UBERON:0007220 ! late embryonic stage
-intersection_of: UBERON:0007220 ! late embryonic stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: FBdv:00018001 FBdv:00005289 ! substage of embryonic stage
-relationship: immediately_preceded_by FBdv:00005331 ! dorsal closure stage
-relationship: immediately_preceded_by FBdv:00005332 ! embryonic stage 15
-property_value: IAO:0000589 "late embryonic stage (drosophila)" xsd:string
-
[Term]
id: FBdv:00005334
name: embryonic stage 16
@@ -4944,7 +4487,6 @@ namespace: FlyBase_development_CV
def: "Stage 16 begins when the intersegmental grooves can be distinguished at mid-dorsal level, and ends when the dorsal ridge (frontal sac) has overgrown the tip of the clypeolabrum, which is thereby enclosed in the atrium. During this stage the ventral cord retracts to about 60% egg length. Duration at 25 degrees C: approximately 180 minutes (780-960 minutes after egg laying)." [FlyBase:FBrf0089570]
comment: Temporal ordering number - 380.
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005333 ! substage of late embryonic stage
relationship: immediately_preceded_by FBdv:00005331 ! dorsal closure stage
relationship: immediately_preceded_by FBdv:00005332 ! embryonic stage 15
@@ -4955,30 +4497,11 @@ namespace: FlyBase_development_CV
def: "Stage 17 begins when the dorsal ridge (frontal sac) has overgrown the tip of the clypeolabrum, which is thereby enclosed in the atrium. It lasts until hatching of the embryo (approximately 24 hours after egg laying), during which time much terminal differentiation occurs, the tracheal tree fills with air, so becoming completely visible, and the ventral cord continues to retract. Duration at 25 degrees C: approximately 8 hours (16-24 hours after egg laying)." [FlyBase:FBrf0089570]
comment: Temporal ordering number - 390.
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005333 ! substage of late embryonic stage
relationship: immediately_preceded_by FBdv:00005334 ! embryonic stage 16
-[Term]
-id: FBdv:00005336
-name: larval stage
-namespace: FlyBase_development_CV
-def: "The stage of the Drosophila life-cycle from hatching to the beginning of puparium formation." [FBC:DOS]
-comment: Temporal ordering number - 400.
-subset: life_stage
-is_a: FBdv:00007012 ! life stage
-is_a: UBERON:0004730 ! instar larval stage
-intersection_of: UBERON:0004730 ! instar larval stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: immediately_preceded_by FBdv:00005289 ! embryonic stage
-relationship: immediately_preceded_by FBdv:00005335 ! embryonic stage 17
-relationship: immediately_preceded_by FBdv:00007018 ! embryonic stage 17(iv)
-relationship: RO:0002090 FBdv:00005342 ! immediately precedes prepupal stage
-relationship: RO:0002090 FBdv:00007001 ! immediately precedes P-stage
-property_value: IAO:0000589 "instar larval stage (drosophila)" xsd:string
-
[Term]
id: FBdv:00005337
-name: first instar larval stage
+name: first instar larval stage (D melanogaster)
namespace: FlyBase_development_CV
def: "The first larval instar begins at hatching and ends at the first larval molt. Anterior spiracles are not yet present; posterior spiracles have two openings each. Salivary glands are very small and all cells are uniform in size. Mouth hooks typically have one tooth. Duration at 25 degrees C: approximately 25 hours (24-49 hours after egg laying; 0-25 hours after hatching)." [FlyBase:FBrf0007733]
comment: Temporal ordering number - 410.
@@ -4986,17 +4509,17 @@ subset: life_stage
synonym: "first instar larva" EXACT []
synonym: "L1" EXACT []
xref: UBERON:8000000
-is_a: FBdv:00007012 ! life stage
-relationship: FBdv:00018001 FBdv:00005336 ! substage of larval stage
-relationship: immediately_preceded_by FBdv:00005289 ! embryonic stage
-relationship: immediately_preceded_by FBdv:00005333 ! late embryonic stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: FBdv:00018001 UBERON:0004730 ! substage of instar larval stage
relationship: immediately_preceded_by FBdv:00005335 ! embryonic stage 17
relationship: immediately_preceded_by FBdv:00007018 ! embryonic stage 17(iv)
-relationship: RO:0002090 FBdv:00005338 ! immediately precedes second instar larval stage
+relationship: immediately_preceded_by UBERON:0000068 ! embryo stage
+relationship: immediately_preceded_by UBERON:0007220 ! late embryonic stage
+relationship: RO:0002090 FBdv:00005338 ! immediately precedes second instar larval stage (D melanogaster)
[Term]
id: FBdv:00005338
-name: second instar larval stage
+name: second instar larval stage (D melanogaster)
namespace: FlyBase_development_CV
def: "The second larval instar begins at the first larval molt and ends at the second larval molt. Larvae are actively feeding and crawling in the food. Distinct anterior spiracles are present as enlargements at the end of the tracheal trunk, but not open to the outside; posterior spiracles have three openings each, and four groups of small unbranched hairs. The salivary glands extend to the first abdominal segment, and have cells that are uniform in size. Mouth hooks typically have two or three teeth. Duration at 25 degrees C: approximately 23 hours (49-72 hours after egg laying; 25-48 hours after hatching)." [FlyBase:FBrf0007733]
comment: Temporal ordering number - 420.
@@ -5004,14 +4527,14 @@ subset: life_stage
synonym: "L2" EXACT []
synonym: "second instar larva" EXACT []
xref: UBERON:8000001
-is_a: FBdv:00007012 ! life stage
-relationship: FBdv:00018001 FBdv:00005336 ! substage of larval stage
-relationship: immediately_preceded_by FBdv:00005337 ! first instar larval stage
-relationship: RO:0002090 FBdv:00005339 ! immediately precedes third instar larval stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: FBdv:00018001 UBERON:0004730 ! substage of instar larval stage
+relationship: immediately_preceded_by FBdv:00005337 ! first instar larval stage (D melanogaster)
+relationship: RO:0002090 FBdv:00005339 ! immediately precedes third instar larval stage (D melanogaster)
[Term]
id: FBdv:00005339
-name: third instar larval stage
+name: third instar larval stage (D melanogaster)
namespace: FlyBase_development_CV
def: "The third larval instar begins at the second larval molt and ends at puparium formation. Anterior spiracles are open to the outside; posterior spiracles have three openings each, and four groups of large branched hairs. The salivary glands extend to the second abdominal segment, with cells larger in the posterior than in the anterior of the gland. Mouth hooks typically have 9-12 teeth. About 24 hours before pupariation (at 25 degree C), larvae stop feeding and climb away from their food. Duration at 25 degrees C: approximately 48 hours (72-120 hours after egg laying; 48-96 hours after hatching)." [FlyBase:FBrf0007733]
comment: Temporal ordering number - 430.
@@ -5019,11 +4542,11 @@ subset: life_stage
synonym: "L3" EXACT []
synonym: "third instar larva" RELATED []
xref: UBERON:8000002
-is_a: FBdv:00007012 ! life stage
-relationship: FBdv:00018001 FBdv:00005336 ! substage of larval stage
-relationship: immediately_preceded_by FBdv:00005338 ! second instar larval stage
-relationship: RO:0002090 FBdv:00005342 ! immediately precedes prepupal stage
-relationship: RO:0002090 FBdv:00007001 ! immediately precedes P-stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: FBdv:00018001 UBERON:0004730 ! substage of instar larval stage
+relationship: immediately_preceded_by FBdv:00005338 ! second instar larval stage (D melanogaster)
+relationship: RO:0002090 FBdv:00005342 ! immediately precedes prepupal stage (D melanogaster)
+relationship: RO:0002090 FBdv:00007001 ! immediately precedes P-stage (D melanogaster)
[Term]
id: FBdv:00005340
@@ -5033,8 +4556,8 @@ def: "Third instar larva prior to the wandering stage (approximately the first 2
comment: Temporal ordering number - 440.
is_a: FBdv:00005259 ! developmental stage
relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
-relationship: FBdv:00018001 FBdv:00005339 ! substage of third instar larval stage
-relationship: immediately_preceded_by FBdv:00005338 ! second instar larval stage
+relationship: FBdv:00018001 FBdv:00005339 ! substage of third instar larval stage (D melanogaster)
+relationship: immediately_preceded_by FBdv:00005338 ! second instar larval stage (D melanogaster)
property_value: dcterms-date "2008-11-13T11:51:56Z" xsd:string
[Term]
@@ -5053,18 +4576,18 @@ property_value: dcterms-date "2008-11-13T11:55:46Z" xsd:string
[Term]
id: FBdv:00005342
-name: prepupal stage
+name: prepupal stage (D melanogaster)
namespace: FlyBase_development_CV
def: "The prepupal stage begins at puparium formation and ends when larval/pupal apolysis is complete, as indicated by the completion of imaginal head sac eversion and the expulsion of the oral armature of the larva. Duration at 25 degrees C: approximately 12 hours. (120-132.2 hours after egg laying; 0-12.2 hours after puparium formation)." [FlyBase:FBrf0036849, FlyBase:FBrf0048355]
comment: Temporal ordering number - 500.
subset: life_stage
-is_a: FBdv:00007012 ! life stage
-relationship: FBdv:00018001 FBdv:00007001 ! substage of P-stage
-relationship: immediately_preceded_by FBdv:00005336 ! larval stage
-relationship: immediately_preceded_by FBdv:00005339 ! third instar larval stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: FBdv:00018001 FBdv:00007001 ! substage of P-stage (D melanogaster)
+relationship: immediately_preceded_by FBdv:00005339 ! third instar larval stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00007005 ! third instar larval stage L2
relationship: immediately_preceded_by FBdv:00007007 ! late third instar larval stage
-relationship: RO:0002090 FBdv:00005349 ! immediately precedes pupal stage
+relationship: immediately_preceded_by UBERON:0004730 ! instar larval stage
+relationship: RO:0002090 UBERON:0000070 ! immediately precedes pupal stage
[Term]
id: FBdv:00005343
@@ -5078,9 +4601,8 @@ synonym: "puparium formation" EXACT [FlyBase:FBrf0036849]
synonym: "white prepupa" NARROW [FlyBase:FBrf0036849]
synonym: "white puparium stage" EXACT [FlyBase:FBrf0036849]
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005342 ! substage of prepupal stage
-relationship: immediately_preceded_by FBdv:00005336 ! larval stage
-relationship: immediately_preceded_by FBdv:00005339 ! third instar larval stage
+relationship: FBdv:00018001 FBdv:00005342 ! substage of prepupal stage (D melanogaster)
+relationship: immediately_preceded_by FBdv:00005339 ! third instar larval stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00007005 ! third instar larval stage L2
relationship: immediately_preceded_by FBdv:00007007 ! late third instar larval stage
@@ -5093,7 +4615,7 @@ comment: Temporal ordering number - 520.
synonym: "brown puparium stage" EXACT [FlyBase:FBrf0036849]
synonym: "pupal stage P2" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005342 ! substage of prepupal stage
+relationship: FBdv:00018001 FBdv:00005342 ! substage of prepupal stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005343 ! prepupal stage P1
[Term]
@@ -5105,7 +4627,7 @@ comment: Temporal ordering number - 530.
synonym: "bubble prepupa stage" EXACT [FlyBase:FBrf0036849]
synonym: "pupal stage P3" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005342 ! substage of prepupal stage
+relationship: FBdv:00018001 FBdv:00005342 ! substage of prepupal stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005344 ! prepupal stage P2
[Term]
@@ -5117,7 +4639,7 @@ comment: Temporal ordering number - 540.
synonym: "cryptocephalic pupa" EXACT [FlyBase:FBrf0036849]
synonym: "pupal stage P4" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005342 ! substage of prepupal stage
+relationship: FBdv:00018001 FBdv:00005342 ! substage of prepupal stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005345 ! prepupal stage P3
[Term]
@@ -5144,23 +4666,6 @@ is_a: FBdv:00005259 ! developmental stage
relationship: FBdv:00018001 FBdv:00005346 ! substage of prepupal stage P4
relationship: immediately_preceded_by FBdv:00005347 ! prepupal stage P4(i)
-[Term]
-id: FBdv:00005349
-name: pupal stage
-namespace: FlyBase_development_CV
-def: "The pupal stage starts once larval/pupal apolysis is complete as indicated by the expulsion of the larval armature. Early in this stage, the legs and wings reach full extension along the abdomen. The stage ends when the pupal cuticle separates from the underlying epidermis (pupal/adult apolysis), and the eye cup becomes yellow at its periphery. Duration at 25 degrees C: approximately 32 hours. (132.2-164.3 hours after egg laying; 12.2-44.3 hours after puparium formation)." [FlyBase:FBrf0036849, FlyBase:FBrf0048355]
-comment: Temporal ordering number - 570. DISAMBIGUATION: In Drosophila lab vernacular, the term 'pupal stage' is often used to refer to the entire period from formation of the puparium to eclosion. However, this does not correspond to the standard usage of 'pupal stage' for Cyclorrhaphous flies (for discussion see: FBrf0087128). Briefly: formation of the puparium (hardening of the larval cuticle) marks the beginning of the pre-pupal stage. The pupal stage begins following pupal/larval apolysis - detachment of the larval epidermis from the puparium. In Drosophila, the outward sign of the completion of apolysis is the eversion of the head and expulsion of the larval mouthparts (FBrf0036849). We use P-stage to refer to the stage from pupariation to eclosion, and restrict pupal stage to its standard usage.
-subset: life_stage
-synonym: "phanerocephalic pupa" EXACT [FlyBase:FBrf0036849]
-is_a: FBdv:00007012 ! life stage
-is_a: UBERON:0000070 ! pupal stage
-intersection_of: UBERON:0000070 ! pupal stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: FBdv:00018001 FBdv:00007001 ! substage of P-stage
-relationship: immediately_preceded_by FBdv:00005342 ! prepupal stage
-relationship: RO:0002090 FBdv:00006011 ! immediately precedes pharate adult stage
-property_value: IAO:0000589 "pupal stage (drosophila)" xsd:string
-
[Term]
id: FBdv:00005350
name: pupal stage P5
@@ -5168,8 +4673,7 @@ namespace: FlyBase_development_CV
def: "Pupal stage P5 starts when the legs and wings reach full extension along the abdomen and ends as the Malpighian tubules become prominent and green. Duration at 25 degrees C: approximately 6 hours, 30 minutes. (132.2-138.7 hours after egg laying; 12.2-18.7 hours after puparium formation)." [FlyBase:FBrf0036849, FlyBase:FBrf0048355]
comment: Temporal ordering number - 580.
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005349 ! substage of pupal stage
-relationship: immediately_preceded_by FBdv:00005342 ! prepupal stage
+relationship: immediately_preceded_by FBdv:00005342 ! prepupal stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005346 ! prepupal stage P4
relationship: immediately_preceded_by FBdv:00005348 ! prepupal stage P4(ii)
@@ -5204,7 +4708,6 @@ def: "Dark green 'yellow body' appears between the anterior ends of the two Malp
comment: Temporal ordering number - 610.
synonym: "green Malpighian tubules stage" EXACT [FlyBase:FBrf0036849]
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005349 ! substage of pupal stage
relationship: immediately_preceded_by FBdv:00005350 ! pupal stage P5
relationship: immediately_preceded_by FBdv:00005352 ! pupal stage P5(ii)
@@ -5216,7 +4719,6 @@ def: "The 'yellow body' moves back between the Malpighian tubules. The transpare
comment: Temporal ordering number - 620.
synonym: "yellow body stage" EXACT [FlyBase:FBrf0036849]
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00005349 ! substage of pupal stage
relationship: immediately_preceded_by FBdv:00005353 ! pupal stage P6
[Term]
@@ -5228,8 +4730,7 @@ comment: Temporal ordering number - 630.
synonym: "pupal stage P8" EXACT []
synonym: "yellow-eyed stage" EXACT [FlyBase:FBrf0036849]
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage
-relationship: immediately_preceded_by FBdv:00005349 ! pupal stage
+relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005354 ! pupal stage P7
[Term]
@@ -5241,7 +4742,7 @@ comment: Temporal ordering number - 640.
synonym: "amber-eyed stage" EXACT [FlyBase:FBrf0036849]
synonym: "pupal stage P9" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage
+relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005355 ! pharate adult stage P8
[Term]
@@ -5253,7 +4754,7 @@ comment: Temporal ordering number - 650.
synonym: "pupal stage P10" EXACT []
synonym: "red-eye bald stage" EXACT [FlyBase:FBrf0036849]
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage
+relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005356 ! pharate adult stage P9
[Term]
@@ -5264,7 +4765,7 @@ def: "Thoracic bristles become visible, and the tips of the wings turn grey. Dur
comment: Temporal ordering number - 660.
synonym: "pupal stage P11" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage
+relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005357 ! pharate adult stage P10
[Term]
@@ -5299,7 +4800,7 @@ def: "Pharate adult stage P12 begins as the abdominal tergite bristles become vi
comment: Temporal ordering number - 690.
synonym: "pupal stage P12" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage
+relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005358 ! pharate adult stage P11
relationship: immediately_preceded_by FBdv:00005360 ! pharate adult stage P11(ii)
@@ -5337,7 +4838,7 @@ comment: Temporal ordering number - 720.
synonym: "pupal stage P13" EXACT []
synonym: "wings black stage" EXACT [FlyBase:FBrf0036849]
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage
+relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005361 ! pharate adult stage P12
relationship: immediately_preceded_by FBdv:00005363 ! pharate adult stage P12(ii)
@@ -5350,7 +4851,7 @@ comment: Temporal ordering number - 730.
synonym: "mature bristles stage" EXACT [FlyBase:FBrf0036849]
synonym: "pupal stage P14" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage
+relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005364 ! pharate adult stage P13
[Term]
@@ -5361,7 +4862,7 @@ def: "Pharate adult stage P15 begins with the tanning of the tergites and ends w
comment: Temporal ordering number - 740.
synonym: "pupal stage P15" EXACT []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage
+relationship: FBdv:00018001 FBdv:00006011 ! substage of pharate adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005365 ! pharate adult stage P14
[Term]
@@ -5388,23 +4889,6 @@ is_a: FBdv:00005259 ! developmental stage
relationship: FBdv:00018001 FBdv:00005366 ! substage of pharate adult stage P15
relationship: immediately_preceded_by FBdv:00005367 ! pharate adult stage P15(i)
-[Term]
-id: FBdv:00005369
-name: adult stage
-namespace: FlyBase_development_CV
-def: "The stage of the Drosophila life-cycle from eclosion to death." [FBC:DOS]
-comment: Temporal ordering number - 770.
-subset: life_stage
-is_a: FBdv:00007012 ! life stage
-is_a: UBERON:0000066 ! fully formed stage
-intersection_of: UBERON:0000066 ! fully formed stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: immediately_preceded_by FBdv:00005366 ! pharate adult stage P15
-relationship: immediately_preceded_by FBdv:00005368 ! pharate adult stage P15(ii)
-relationship: immediately_preceded_by FBdv:00006011 ! pharate adult stage
-relationship: immediately_preceded_by FBdv:00007001 ! P-stage
-property_value: IAO:0000589 "fully formed stage (drosophila)" xsd:string
-
[Term]
id: FBdv:00005370
name: adult stage A1
@@ -5414,10 +4898,10 @@ def: "Newly eclosed adult stage. Animal free of pupal case. Runs rapidly to find
comment: Temporal ordering number - 785. The time at which eclosed flies settle down for wing expansion can vary greatly. If they fail to find a suitable site then expansion can be delayed by several hours.
synonym: "adult stage I" RELATED []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00007025 ! substage of immature adult stage
+relationship: FBdv:00018001 FBdv:00007025 ! substage of immature adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005368 ! pharate adult stage P15(ii)
-relationship: immediately_preceded_by FBdv:00006011 ! pharate adult stage
-relationship: immediately_preceded_by FBdv:00007001 ! P-stage
+relationship: immediately_preceded_by FBdv:00006011 ! pharate adult stage (D melanogaster)
+relationship: immediately_preceded_by FBdv:00007001 ! P-stage (D melanogaster)
relationship: RO:0002090 FBdv:00005371 ! immediately precedes adult stage A2
[Term]
@@ -5429,24 +4913,24 @@ def: "Stage, shortly after eclosion, during which the wings expand. During wing
comment: Temporal ordering number - 790.
synonym: "adult stage II" RELATED []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00007025 ! substage of immature adult stage
+relationship: FBdv:00018001 FBdv:00007025 ! substage of immature adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005370 ! adult stage A1
relationship: RO:0002090 FBdv:00006012 ! immediately precedes adult stage A3
[Term]
id: FBdv:00006011
-name: pharate adult stage
+name: pharate adult stage (D melanogaster)
namespace: FlyBase_development_CV
def: "The developing adult after pupal-adult apolysis, i.e.- from stage P8 (when yellow eye color first becomes visible through the pupal case), to eclosion. Duration at 25 degrees C: approximately 55.7 hours (164.3-220 hours after egg laying; 44.3-100 hours after puparium formation)." [FlyBase:FBrf0036849, FlyBase:FBrf0048355, FlyBase:FBrf0049147]
comment: Temporal ordering number - 625.
subset: life_stage
-is_a: FBdv:00007012 ! life stage
-relationship: FBdv:00018001 FBdv:00007001 ! substage of P-stage
-relationship: immediately_preceded_by FBdv:00005349 ! pupal stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: FBdv:00018001 FBdv:00007001 ! substage of P-stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005354 ! pupal stage P7
-relationship: RO:0002090 FBdv:00005369 ! immediately precedes adult stage
+relationship: immediately_preceded_by UBERON:0000070 ! pupal stage
relationship: RO:0002090 FBdv:00005370 ! immediately precedes adult stage A1
-relationship: RO:0002090 FBdv:00007025 ! immediately precedes immature adult stage
+relationship: RO:0002090 FBdv:00007025 ! immediately precedes immature adult stage (D melanogaster)
+relationship: RO:0002090 UBERON:0000066 ! immediately precedes fully formed stage
[Term]
id: FBdv:00006012
@@ -5457,28 +4941,28 @@ def: "Adult stage immediately after wing expansion, during which tanning of the
comment: Temporal ordering number - 800.
synonym: "adult stage III" RELATED []
is_a: FBdv:00005259 ! developmental stage
-relationship: FBdv:00018001 FBdv:00007025 ! substage of immature adult stage
+relationship: FBdv:00018001 FBdv:00007025 ! substage of immature adult stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005371 ! adult stage A2
-relationship: RO:0002090 FBdv:00007026 ! immediately precedes mature adult stage
+relationship: RO:0002090 FBdv:00007026 ! immediately precedes mature adult stage (D melanogaster)
[Term]
id: FBdv:00007001
-name: P-stage
+name: P-stage (D melanogaster)
namespace: FlyBase_development_CV
def: "The stage of the Drosophila life-cycle from the formation of the puparium (beginning of the prepupal stage) to eclosion." [FBC:DOS]
comment: Temporal ordering number - 490. DISAMBIGUATION: In Drosophila lab vernacular, the term 'pupal stage' is often used to refer to the entire period from formation of the puparium to eclosion. However, this does not correspond to the standard usage of 'pupal stage' for cyclorrhaphous flies (for discussion see: FBrf0087128). Briefly: formation of the puparium (hardening of the larval cuticle) marks the beginning of the pre-pupal stage. The pupal stage begins following pupal/larval apolysis - detachment of the larval epidermis from the puparium. In Drosophila, the outward sign of the completion of apolysis is the eversion of the head an expulsion of the larval mouthparts (FBrf0036849). We use P-stage to refer to the stage from pupariation to eclosion, and restrict pupal stage to its standard usage.
subset: life_stage
synonym: "metamorphosis" BROAD []
synonym: "pupal stage" RELATED []
-is_a: FBdv:00007012 ! life stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
-relationship: immediately_preceded_by FBdv:00005336 ! larval stage
-relationship: immediately_preceded_by FBdv:00005339 ! third instar larval stage
+relationship: immediately_preceded_by FBdv:00005339 ! third instar larval stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00007005 ! third instar larval stage L2
relationship: immediately_preceded_by FBdv:00007007 ! late third instar larval stage
-relationship: RO:0002090 FBdv:00005369 ! immediately precedes adult stage
+relationship: immediately_preceded_by UBERON:0004730 ! instar larval stage
relationship: RO:0002090 FBdv:00005370 ! immediately precedes adult stage A1
-relationship: RO:0002090 FBdv:00007025 ! immediately precedes immature adult stage
+relationship: RO:0002090 FBdv:00007025 ! immediately precedes immature adult stage (D melanogaster)
+relationship: RO:0002090 UBERON:0000066 ! immediately precedes fully formed stage
property_value: dcterms-date "2008-06-05T04:51:40Z" xsd:string
[Term]
@@ -5512,20 +4996,10 @@ def: "Third instar larva from the beginning of wandering to the beginning of pup
comment: Temporal ordering number - 450.
is_a: FBdv:00005259 ! developmental stage
relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
-relationship: FBdv:00018001 FBdv:00005339 ! substage of third instar larval stage
+relationship: FBdv:00018001 FBdv:00005339 ! substage of third instar larval stage (D melanogaster)
relationship: immediately_preceded_by FBdv:00005340 ! early third instar larval stage
property_value: dcterms-date "2008-12-11T01:19:53Z" xsd:string
-[Term]
-id: FBdv:00007009
-name: developmental process
-namespace: FlyBase_development_CV
-def: "A biological process whose specific outcome is the progression of an integrated living unit (an anatomical structure or an entire organism) over time from an initial condition to a later condition." [GO:0032502]
-xref: GO:0032502
-is_a: FBdv:00007024 ! biological process
-relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
-property_value: dcterms-date "2009-10-01T05:56:42Z" xsd:string
-
[Term]
id: FBdv:00007011
name: embryonic cycle
@@ -5535,23 +5009,6 @@ is_a: FBdv:00007024 ! biological process
relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
property_value: dcterms-date "2009-10-01T05:57:41Z" xsd:string
-[Term]
-id: FBdv:00007012
-name: life stage
-namespace: FlyBase_development_CV
-def: "A temporal subdivision of a Drosophila life, delimited by major transitions in the circumstances of the organism, such as: fertilization; hatching; pupal ecdysis; eclosion." [FBC:DOS]
-subset: life_stage
-synonym: "life cycle stage" EXACT []
-is_a: FBdv:00005259 ! developmental stage
-is_a: UBERON:0000105 ! life cycle stage
-intersection_of: UBERON:0000105 ! life cycle stage
-intersection_of: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: BFO:0000066 NCBITaxon:7227 ! occurs in Drosophila melanogaster
-relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
-relationship: FBdv:00018001 FBdv:00000000 ! substage of Drosophila life
-property_value: dcterms-date "2009-10-01T05:59:22Z" xsd:string
-property_value: IAO:0000589 "life cycle stage (drosophila)" xsd:string
-
[Term]
id: FBdv:00007013
name: age
@@ -5658,29 +5115,29 @@ is_a: BFO:0000003 ! occurrent
[Term]
id: FBdv:00007025
-name: immature adult stage
+name: immature adult stage (D melanogaster)
namespace: FlyBase_development_CV
def: "The developmental stage that lasts from eclosion of the adult from the pupal case until tanning is complete (the end of adult stage A3)." [FBC:DOS]
comment: Temporal ordering number - 782.
subset: life_stage
-is_a: FBdv:00007012 ! life stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
relationship: FBdv:00018001 FBdv:00007075 ! substage of day 0 of adulthood
-relationship: immediately_preceded_by FBdv:00006011 ! pharate adult stage
-relationship: immediately_preceded_by FBdv:00007001 ! P-stage
-relationship: RO:0002090 FBdv:00007026 ! immediately precedes mature adult stage
+relationship: immediately_preceded_by FBdv:00006011 ! pharate adult stage (D melanogaster)
+relationship: immediately_preceded_by FBdv:00007001 ! P-stage (D melanogaster)
+relationship: RO:0002090 FBdv:00007026 ! immediately precedes mature adult stage (D melanogaster)
property_value: dcterms-date "2013-01-08T20:06:59Z" xsd:string
[Term]
id: FBdv:00007026
-name: mature adult stage
+name: mature adult stage (D melanogaster)
namespace: FlyBase_development_CV
def: "Life stage from the end of adult stage A3, when tanning is complete, to death." [FBC:DOS]
subset: life_stage
-is_a: FBdv:00007012 ! life stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: dc-contributor http://orcid.org/0000-0002-7073-9172
relationship: immediately_preceded_by FBdv:00006012 ! adult stage A3
-relationship: immediately_preceded_by FBdv:00007025 ! immature adult stage
+relationship: immediately_preceded_by FBdv:00007025 ! immature adult stage (D melanogaster)
property_value: dcterms-date "2013-01-10T13:03:54Z" xsd:string
[Term]
@@ -5690,11 +5147,10 @@ namespace: FlyBase_development_CV
def: "The day of eclosion." [FBC:DOS]
comment: Temporal ordering number - 780.
is_a: FBdv:00007014 ! adult age in days
-relationship: FBdv:00018001 FBdv:00005369 ! substage of adult stage
relationship: immediately_preceded_by FBdv:00005366 ! pharate adult stage P15
relationship: immediately_preceded_by FBdv:00005368 ! pharate adult stage P15(ii)
-relationship: immediately_preceded_by FBdv:00006011 ! pharate adult stage
-relationship: immediately_preceded_by FBdv:00007001 ! P-stage
+relationship: immediately_preceded_by FBdv:00006011 ! pharate adult stage (D melanogaster)
+relationship: immediately_preceded_by FBdv:00007001 ! P-stage (D melanogaster)
[Term]
id: FBdv:00014201
@@ -5704,7 +5160,6 @@ def: "A collective term for stages 9 and 10." [FBC:DOS]
comment: Temporal ordering number - 270.
is_a: FBdv:00005259 ! developmental stage
relationship: FBdv:00018001 FBdv:00005321 ! substage of extended germ band stage
-relationship: immediately_preceded_by FBdv:00005317 ! gastrula stage
relationship: immediately_preceded_by FBdv:00005322 ! embryonic stage 8
[Term]
@@ -7531,15 +6986,13 @@ id: GgalDv:0000004
name: hatchling stage (chicken)
namespace: chicken_developmental_stage
def: "Chicken developmental stage that covers the period from hatching until 4 weeks old, during which individuals have no feathers." [Bgee:curator]
-comment: For now, in Bgee, dev. stages can have only one direct parent by part_of relation. In Uberon, UBERON:0007221 neonate stage is both part_of UBERON:0018685 nursing stage, in mammalia, and of UBERON:0000112 sexually immature stage in other species. To accomodate Bgee, for now we merge GgalDv:0000004 hwith UBERON:0007221 neonate, as it should. This should be reverted when Bgee updates, by adding a xref to UBERON:0007221
+comment: For now, in Bgee, dev. stages can have only one direct parent by part_of relation. In Uberon, UBERON:0007221 neonate stage is both part_of UBERON:0018685 nursing stage, in mammalia, and of UBERON:0000112 sexually immature stage in other species. To accomodate Bgee, for now we merge GgalDv:0000004 with UBERON:0007221 neonate, as it should. This should be reverted when Bgee updates, by adding a xref to UBERON:0007221
subset: life_stage
synonym: "neonate stage" RELATED []
synonym: "under-1-month-old chicken stage" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000112 ! sexually immature stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "1.0" xsd:float
-property_value: IAO:0000589 "hatchling stage (chicken)" xsd:string
property_value: start_dpf "21.0" xsd:float
property_value: start_mph "0.0" xsd:float
@@ -7552,9 +7005,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000087 ! 11-month-old stage (chicken)
relationship: part_of GgalDv:0000078 ! young adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "24.0" xsd:float
-property_value: IAO:0000589 "1-year-old stage (chicken)" xsd:string
property_value: start_mph "12.0" xsd:float
[Term]
@@ -7567,8 +7018,6 @@ subset: life_stage
synonym: "HH1" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000108 ! blastula stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
-property_value: IAO:0000589 "Hamburger Hamilton stage 1 (chicken)" xsd:string
property_value: start_dpf "1.0" xsd:float
property_value: start_dpf "1.25" xsd:float
@@ -7582,9 +7031,7 @@ subset: life_stage
synonym: "HH3" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000109 ! gastrula stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "1.75" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 3 (chicken)" xsd:string
property_value: start_dpf "1.5" xsd:float
[Term]
@@ -7598,9 +7045,7 @@ synonym: "HH4" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000012 ! Hamburger Hamilton stage 3 (chicken)
relationship: part_of UBERON:0000109 ! gastrula stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "1.8" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 4 (chicken)" xsd:string
property_value: start_dpf "1.75" xsd:float
[Term]
@@ -7613,9 +7058,7 @@ subset: life_stage
synonym: "HH7" RELATED []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "2.1" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 7 (chicken)" xsd:string
property_value: start_dpf "2.0" xsd:float
[Term]
@@ -7629,9 +7072,7 @@ synonym: "HH8" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000015 ! Hamburger Hamilton stage 7 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "2.2" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 8 (chicken)" xsd:string
property_value: start_dpf "2.1" xsd:float
[Term]
@@ -7645,9 +7086,7 @@ synonym: "HH9" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000017 ! Hamburger Hamilton stage 8 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "2.4" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 9 (chicken)" xsd:string
property_value: start_dpf "2.2" xsd:float
[Term]
@@ -7660,9 +7099,7 @@ subset: life_stage
synonym: "HH9+ to 10-" RELATED []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of GgalDv:0000018 ! Hamburger Hamilton stage 9 (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "2.4" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stages 9+ to 10- (chicken)" xsd:string
property_value: start_dpf "2.3" xsd:float
[Term]
@@ -7676,9 +7113,7 @@ synonym: "HH10" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000019 ! Hamburger Hamilton stages 9+ to 10- (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "2.6" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 10 (chicken)" xsd:string
property_value: start_dpf "2.4" xsd:float
[Term]
@@ -7692,9 +7127,7 @@ synonym: "HH11" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000020 ! Hamburger Hamilton stage 10 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "2.9" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 11 (chicken)" xsd:string
property_value: start_dpf "2.6" xsd:float
[Term]
@@ -7708,9 +7141,7 @@ synonym: "HH12" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000021 ! Hamburger Hamilton stage 11 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 12 (chicken)" xsd:string
property_value: start_dpf "2.9" xsd:float
[Term]
@@ -7724,9 +7155,7 @@ synonym: "HH13" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000022 ! Hamburger Hamilton stage 12 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.2" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 13 (chicken)" xsd:string
property_value: start_dpf "3.0" xsd:float
[Term]
@@ -7739,9 +7168,7 @@ subset: life_stage
synonym: "HH13+ to 14-" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of GgalDv:0000023 ! Hamburger Hamilton stage 13 (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.2" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stages 13+ to 14- (chicken)" xsd:string
property_value: start_dpf "3.1" xsd:float
[Term]
@@ -7755,9 +7182,7 @@ synonym: "HH14" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000024 ! Hamburger Hamilton stages 13+ to 14- (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.25" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 14 (chicken)" xsd:string
property_value: start_dpf "3.2" xsd:float
[Term]
@@ -7770,9 +7195,7 @@ subset: life_stage
synonym: "HH14+ to 15-" RELATED []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of GgalDv:0000025 ! Hamburger Hamilton stage 14 (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.25" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stages 14+ to 15- (chicken)" xsd:string
property_value: start_dpf "3.21" xsd:float
[Term]
@@ -7786,9 +7209,7 @@ synonym: "HH15" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000026 ! Hamburger Hamilton stages 14+ to 15- (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.3" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 15 (chicken)" xsd:string
property_value: start_dpf "3.25" xsd:float
[Term]
@@ -7802,9 +7223,7 @@ synonym: "HH16" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000027 ! Hamburger Hamilton stage 15 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.35" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 16 (chicken)" xsd:string
property_value: start_dpf "3.3" xsd:float
[Term]
@@ -7818,9 +7237,7 @@ synonym: "HH17" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000028 ! Hamburger Hamilton stage 16 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.7" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 17 (chicken)" xsd:string
property_value: start_dpf "3.35" xsd:float
[Term]
@@ -7834,9 +7251,7 @@ synonym: "HH18" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000029 ! Hamburger Hamilton stage 17 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.75" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 18 (chicken)" xsd:string
property_value: start_dpf "3.7" xsd:float
[Term]
@@ -7850,9 +7265,7 @@ synonym: "HH19" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000030 ! Hamburger Hamilton stage 18 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "3.8" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 19 (chicken)" xsd:string
property_value: start_dpf "3.75" xsd:float
[Term]
@@ -7866,9 +7279,7 @@ synonym: "HH20" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000031 ! Hamburger Hamilton stage 19 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "4.5" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 20 (chicken)" xsd:string
property_value: start_dpf "3.8" xsd:float
[Term]
@@ -7882,9 +7293,7 @@ synonym: "HH21" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000034 ! Hamburger Hamilton stage 20 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "4.6" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 21 (chicken)" xsd:string
property_value: start_dpf "4.5" xsd:float
[Term]
@@ -7898,9 +7307,7 @@ synonym: "HH22" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000035 ! Hamburger Hamilton stage 21 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "5.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 22 (chicken)" xsd:string
property_value: start_dpf "4.6" xsd:float
[Term]
@@ -7914,9 +7321,7 @@ synonym: "HH23" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000036 ! Hamburger Hamilton stage 22 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "5.5" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 23 (chicken)" xsd:string
property_value: start_dpf "5.0" xsd:float
[Term]
@@ -7930,9 +7335,7 @@ synonym: "HH24" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000037 ! Hamburger Hamilton stage 23 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "5.6" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 24 (chicken)" xsd:string
property_value: start_dpf "5.5" xsd:float
[Term]
@@ -7946,9 +7349,7 @@ synonym: "HH25" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000038 ! Hamburger Hamilton stage 24 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "6.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 25 (chicken)" xsd:string
property_value: start_dpf "5.6" xsd:float
[Term]
@@ -7962,9 +7363,7 @@ synonym: "HH26" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000039 ! Hamburger Hamilton stage 25 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "6.1" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 26 (chicken)" xsd:string
property_value: start_dpf "6.0" xsd:float
[Term]
@@ -7978,9 +7377,7 @@ synonym: "HH27" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000040 ! Hamburger Hamilton stage 26 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "6.5" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 27 (chicken)" xsd:string
property_value: start_dpf "6.1" xsd:float
[Term]
@@ -7994,9 +7391,7 @@ synonym: "HH28" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000041 ! Hamburger Hamilton stage 27 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "7.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 28 (chicken)" xsd:string
property_value: start_dpf "6.5" xsd:float
[Term]
@@ -8010,9 +7405,7 @@ synonym: "HH29" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000042 ! Hamburger Hamilton stage 28 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "7.5" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 29 (chicken)" xsd:string
property_value: start_dpf "7.0" xsd:float
[Term]
@@ -8026,9 +7419,7 @@ synonym: "HH30" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000043 ! Hamburger Hamilton stage 29 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "8.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 30 (chicken)" xsd:string
property_value: start_dpf "7.5" xsd:float
[Term]
@@ -8042,9 +7433,7 @@ synonym: "HH31" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000044 ! Hamburger Hamilton stage 30 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "8.5" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 31 (chicken)" xsd:string
property_value: start_dpf "8.0" xsd:float
[Term]
@@ -8058,9 +7447,7 @@ synonym: "HH32" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000045 ! Hamburger Hamilton stage 31 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "8.6" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 32 (chicken)" xsd:string
property_value: start_dpf "8.5" xsd:float
[Term]
@@ -8074,9 +7461,7 @@ synonym: "HH33" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000046 ! Hamburger Hamilton stage 32 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "9.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 33 (chicken)" xsd:string
property_value: start_dpf "8.6" xsd:float
[Term]
@@ -8090,9 +7475,7 @@ synonym: "HH34" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000047 ! Hamburger Hamilton stage 33 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "9.5" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 34 (chicken)" xsd:string
property_value: start_dpf "9.0" xsd:float
[Term]
@@ -8106,9 +7489,7 @@ synonym: "HH35" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000048 ! Hamburger Hamilton stage 34 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "11.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 35 (chicken)" xsd:string
property_value: start_dpf "9.5" xsd:float
[Term]
@@ -8122,9 +7503,7 @@ synonym: "HH36" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000049 ! Hamburger Hamilton stage 35 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "12.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 36 (chicken)" xsd:string
property_value: start_dpf "11.0" xsd:float
[Term]
@@ -8138,9 +7517,7 @@ synonym: "HH37" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000050 ! Hamburger Hamilton stage 36 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "13.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 37 (chicken)" xsd:string
property_value: start_dpf "12.0" xsd:float
[Term]
@@ -8154,9 +7531,7 @@ synonym: "HH38" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000051 ! Hamburger Hamilton stage 37 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "14.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 38 (chicken)" xsd:string
property_value: start_dpf "13.0" xsd:float
[Term]
@@ -8170,9 +7545,7 @@ synonym: "HH39" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000052 ! Hamburger Hamilton stage 38 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "15.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 39 (chicken)" xsd:string
property_value: start_dpf "14.0" xsd:float
[Term]
@@ -8186,9 +7559,7 @@ synonym: "HH40" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000053 ! Hamburger Hamilton stage 39 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "16.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 40 (chicken)" xsd:string
property_value: start_dpf "15.0" xsd:float
[Term]
@@ -8202,9 +7573,7 @@ synonym: "HH41" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000054 ! Hamburger Hamilton stage 40 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "17.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 41 (chicken)" xsd:string
property_value: start_dpf "16.0" xsd:float
[Term]
@@ -8218,9 +7587,7 @@ synonym: "HH42" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000055 ! Hamburger Hamilton stage 41 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "18.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 42 (chicken)" xsd:string
property_value: start_dpf "17.0" xsd:float
[Term]
@@ -8234,9 +7601,7 @@ synonym: "HH43" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000056 ! Hamburger Hamilton stage 42 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "19.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 43 (chicken)" xsd:string
property_value: start_dpf "18.0" xsd:float
[Term]
@@ -8250,9 +7615,7 @@ synonym: "HH44" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000057 ! Hamburger Hamilton stage 43 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "20.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 44 (chicken)" xsd:string
property_value: start_dpf "19.0" xsd:float
[Term]
@@ -8266,9 +7629,7 @@ synonym: "HH45" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000058 ! Hamburger Hamilton stage 44 (chicken)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "21.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 45 (chicken)" xsd:string
property_value: start_dpf "20.0" xsd:float
[Term]
@@ -8282,9 +7643,7 @@ synonym: "HH2" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000010 ! Hamburger Hamilton stage 1 (chicken)
relationship: part_of UBERON:0000108 ! blastula stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "1.5" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stages 2 (chicken)" xsd:string
property_value: start_dpf "1.25" xsd:float
[Term]
@@ -8297,9 +7656,7 @@ subset: life_stage
synonym: "HH5" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000110 ! neurula stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "1.9" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stages 5 (chicken)" xsd:string
property_value: start_dpf "1.8" xsd:float
[Term]
@@ -8313,9 +7670,7 @@ synonym: "HH6" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000061 ! Hamburger Hamilton stages 5 (chicken)
relationship: part_of UBERON:0000110 ! neurula stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "2.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stages 6 (chicken)" xsd:string
property_value: start_dpf "1.9" xsd:float
[Term]
@@ -8328,9 +7683,7 @@ subset: life_stage
synonym: "HH early cleavage" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000107 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "0.2" xsd:float
-property_value: IAO:0000589 "early cleavage stage (chicken)" xsd:string
property_value: start_dpf "0.0" xsd:float
[Term]
@@ -8344,9 +7697,7 @@ synonym: "HH late cleavage" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000063 ! early cleavage stage (chicken)
relationship: part_of UBERON:0000107 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "1.0" xsd:float
-property_value: IAO:0000589 "late cleavage stage (chicken)" xsd:string
property_value: start_dpf "0.2" xsd:float
[Term]
@@ -8359,9 +7710,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000090 ! Hamburger Hamilton stage 46 (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dph "2.0" xsd:float
-property_value: IAO:0000589 "1-day-old stage (chicken)" xsd:string
property_value: start_dph "1.0" xsd:float
[Term]
@@ -8374,9 +7723,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000066 ! 1-day-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dph "3.0" xsd:float
-property_value: IAO:0000589 "2-day-old stage (chicken)" xsd:string
property_value: start_dph "2.0" xsd:float
[Term]
@@ -8389,9 +7736,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000067 ! 2-day-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dph "4.0" xsd:float
-property_value: IAO:0000589 "3-day-old stage (chicken)" xsd:string
property_value: start_dph "3.0" xsd:float
[Term]
@@ -8404,9 +7749,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000068 ! 3-day-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dph "5.0" xsd:float
-property_value: IAO:0000589 "4-day-old stage (chicken)" xsd:string
property_value: start_dph "4.0" xsd:float
[Term]
@@ -8419,9 +7762,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000069 ! 4-day-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dph "6.0" xsd:float
-property_value: IAO:0000589 "5-day-old stage (chicken)" xsd:string
property_value: start_dph "5.0" xsd:float
[Term]
@@ -8434,9 +7775,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000070 ! 5-day-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dph "7.0" xsd:float
-property_value: IAO:0000589 "6-day-old stage (chicken)" xsd:string
property_value: start_dph "6.0" xsd:float
[Term]
@@ -8449,9 +7788,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000071 ! 6-day-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_wph "2.0" xsd:float
-property_value: IAO:0000589 "1-week-old stage (chicken)" xsd:string
property_value: start_wph "1.0" xsd:float
[Term]
@@ -8464,9 +7801,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000072 ! 1-week-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_wph "3.0" xsd:float
-property_value: IAO:0000589 "2-week-old stage (chicken)" xsd:string
property_value: start_wph "2.0" xsd:float
[Term]
@@ -8479,9 +7814,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000073 ! 2-week-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_wph "4.0" xsd:float
-property_value: IAO:0000589 "3-week-old stage (chicken)" xsd:string
property_value: start_wph "3.0" xsd:float
[Term]
@@ -8494,9 +7827,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000074 ! 3-week-old stage (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_wph "5.0" xsd:float
-property_value: IAO:0000589 "4-week-old stage (chicken)" xsd:string
property_value: start_wph "4.0" xsd:float
[Term]
@@ -8508,10 +7839,8 @@ comment: Chicken are considered as having a short life spans (under 6 yrs)(see h
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "24.0" xsd:float
property_value: end_yph "2.0" xsd:float
-property_value: IAO:0000589 "young adult stage (chicken)" xsd:string
property_value: start_mph "5.0" xsd:float
property_value: start_yph "0.4" xsd:float
@@ -8525,9 +7854,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000078 ! young adult stage (chicken)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_yph "4.0" xsd:float
-property_value: IAO:0000589 "middle adult stage (chicken)" xsd:string
property_value: start_yph "2.0" xsd:float
[Term]
@@ -8540,9 +7867,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by UBERON:0034919 ! juvenile stage
relationship: part_of GgalDv:0000078 ! young adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "6.0" xsd:float
-property_value: IAO:0000589 "5-month-old stage (chicken)" xsd:string
property_value: start_mph "5.0" xsd:float
[Term]
@@ -8555,9 +7880,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000081 ! 5-month-old stage (chicken)
relationship: part_of GgalDv:0000078 ! young adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "7.0" xsd:float
-property_value: IAO:0000589 "6-month-old stage (chicken)" xsd:string
property_value: start_mph "6.0" xsd:float
[Term]
@@ -8570,9 +7893,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000082 ! 6-month-old stage (chicken)
relationship: part_of GgalDv:0000078 ! young adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "8.0" xsd:float
-property_value: IAO:0000589 "7-month-old stage (chicken)" xsd:string
property_value: start_mph "7.0" xsd:float
[Term]
@@ -8585,9 +7906,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000083 ! 7-month-old stage (chicken)
relationship: part_of GgalDv:0000078 ! young adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "9.0" xsd:float
-property_value: IAO:0000589 "8-month-old stage (chicken)" xsd:string
property_value: start_mph "8.0" xsd:float
[Term]
@@ -8600,9 +7919,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000084 ! 8-month-old stage (chicken)
relationship: part_of GgalDv:0000078 ! young adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "10.0" xsd:float
-property_value: IAO:0000589 "9-month-old stage (chicken)" xsd:string
property_value: start_mph "9.0" xsd:float
[Term]
@@ -8615,9 +7932,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000085 ! 9-month-old stage (chicken)
relationship: part_of GgalDv:0000078 ! young adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "11.0" xsd:float
-property_value: IAO:0000589 "10-month-old stage (chicken)" xsd:string
property_value: start_mph "10.0" xsd:float
[Term]
@@ -8630,9 +7945,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000086 ! 10-month-old stage (chicken)
relationship: part_of GgalDv:0000078 ! young adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_mph "12.0" xsd:float
-property_value: IAO:0000589 "11-month-old stage (chicken)" xsd:string
property_value: start_mph "11.0" xsd:float
[Term]
@@ -8644,9 +7957,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000008 ! 1-year-old stage (chicken)
relationship: part_of GgalDv:0000079 ! middle adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_yph "3.0" xsd:float
-property_value: IAO:0000589 "2-year-old stage (chicken)" xsd:string
property_value: start_yph "2.0" xsd:float
[Term]
@@ -8658,9 +7969,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000088 ! 2-year-old stage (chicken)
relationship: part_of GgalDv:0000079 ! middle adult stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_yph "4.0" xsd:float
-property_value: IAO:0000589 "3-year-old stage (chicken)" xsd:string
property_value: start_yph "3.0" xsd:float
[Term]
@@ -8674,10 +7983,8 @@ synonym: "HH46" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgalDv:0000059 ! Hamburger Hamilton stage 45 (chicken)
relationship: part_of GgalDv:0000004 ! hatchling stage (chicken)
-relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus
property_value: end_dpf "22.0" xsd:float
property_value: end_dph "1.0" xsd:float
-property_value: IAO:0000589 "Hamburger Hamilton stage 46 (chicken)" xsd:string
property_value: start_dpf "21.0" xsd:float
property_value: start_dph "0.0" xsd:float
@@ -8691,7 +7998,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "31.0" xsd:float
-property_value: IAO:0000589 "30-year-old stage (gorilla)" xsd:string
property_value: start_ypb "30.0" xsd:float
[Term]
@@ -8705,7 +8011,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000009 ! 30-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "32.0" xsd:float
-property_value: IAO:0000589 "31-year-old stage (gorilla)" xsd:string
property_value: start_ypb "31.0" xsd:float
[Term]
@@ -8719,7 +8024,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000010 ! 31-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "33.0" xsd:float
-property_value: IAO:0000589 "32-year-old stage (gorilla)" xsd:string
property_value: start_ypb "32.0" xsd:float
[Term]
@@ -8733,7 +8037,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000011 ! 32-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "34.0" xsd:float
-property_value: IAO:0000589 "33-year-old stage (gorilla)" xsd:string
property_value: start_ypb "33.0" xsd:float
[Term]
@@ -8747,7 +8050,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000012 ! 33-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "35.0" xsd:float
-property_value: IAO:0000589 "34-year-old stage (gorilla)" xsd:string
property_value: start_ypb "34.0" xsd:float
[Term]
@@ -8761,7 +8063,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000013 ! 34-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "36.0" xsd:float
-property_value: IAO:0000589 "35-year-old stage (gorilla)" xsd:string
property_value: start_ypb "35.0" xsd:float
[Term]
@@ -8775,7 +8076,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000014 ! 35-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "37.0" xsd:float
-property_value: IAO:0000589 "36-year-old stage (gorilla)" xsd:string
property_value: start_ypb "36.0" xsd:float
[Term]
@@ -8789,7 +8089,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000015 ! 36-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "38.0" xsd:float
-property_value: IAO:0000589 "37-year-old stage (gorilla)" xsd:string
property_value: start_ypb "37.0" xsd:float
[Term]
@@ -8803,7 +8102,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000016 ! 37-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "39.0" xsd:float
-property_value: IAO:0000589 "38-year-old stage (gorilla)" xsd:string
property_value: start_ypb "38.0" xsd:float
[Term]
@@ -8817,7 +8115,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000017 ! 38-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "40.0" xsd:float
-property_value: IAO:0000589 "39-year-old stage (gorilla)" xsd:string
property_value: start_ypb "39.0" xsd:float
[Term]
@@ -8831,7 +8128,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000018 ! 39-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "41.0" xsd:float
-property_value: IAO:0000589 "40-year-old stage (gorilla)" xsd:string
property_value: start_ypb "40.0" xsd:float
[Term]
@@ -8845,7 +8141,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000019 ! 40-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "42.0" xsd:float
-property_value: IAO:0000589 "41-year-old stage (gorilla)" xsd:string
property_value: start_ypb "41.0" xsd:float
[Term]
@@ -8859,7 +8154,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000020 ! 41-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "43.0" xsd:float
-property_value: IAO:0000589 "42-year-old stage (gorilla)" xsd:string
property_value: start_ypb "42.0" xsd:float
[Term]
@@ -8873,7 +8167,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000021 ! 42-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "44.0" xsd:float
-property_value: IAO:0000589 "43-year-old stage (gorilla)" xsd:string
property_value: start_ypb "43.0" xsd:float
[Term]
@@ -8887,7 +8180,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000022 ! 43-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "45.0" xsd:float
-property_value: IAO:0000589 "44-year-old stage (gorilla)" xsd:string
property_value: start_ypb "44.0" xsd:float
[Term]
@@ -8901,7 +8193,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000023 ! 44-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "46.0" xsd:float
-property_value: IAO:0000589 "45-year-old stage (gorilla)" xsd:string
property_value: start_ypb "45.0" xsd:float
[Term]
@@ -8915,7 +8206,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000024 ! 45-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "47.0" xsd:float
-property_value: IAO:0000589 "46-year-old stage (gorilla)" xsd:string
property_value: start_ypb "46.0" xsd:float
[Term]
@@ -8929,7 +8219,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000025 ! 46-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "48.0" xsd:float
-property_value: IAO:0000589 "47-year-old stage (gorilla)" xsd:string
property_value: start_ypb "47.0" xsd:float
[Term]
@@ -8943,7 +8232,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000026 ! 47-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "49.0" xsd:float
-property_value: IAO:0000589 "48-year-old stage (gorilla)" xsd:string
property_value: start_ypb "48.0" xsd:float
[Term]
@@ -8957,7 +8245,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000027 ! 48-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "50.0" xsd:float
-property_value: IAO:0000589 "49-year-old stage (gorilla)" xsd:string
property_value: start_ypb "49.0" xsd:float
[Term]
@@ -8971,7 +8258,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000028 ! 49-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "51.0" xsd:float
-property_value: IAO:0000589 "50-year-old stage (gorilla)" xsd:string
property_value: start_ypb "50.0" xsd:float
[Term]
@@ -8985,7 +8271,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000029 ! 50-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "52.0" xsd:float
-property_value: IAO:0000589 "51-year-old stage (gorilla)" xsd:string
property_value: start_ypb "51.0" xsd:float
[Term]
@@ -8998,7 +8283,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by GgorDv:0000030 ! 51-year-old stage (gorilla)
relationship: part_of UBERON:0007222 ! late adult stage
-property_value: IAO:0000589 "52-year-old and over stage (gorilla)" xsd:string
property_value: start_ypb "52.0" xsd:float
[Term]
@@ -9015,9 +8299,7 @@ xref: FMA:72652
xref: HP:0011460
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000068 ! embryo stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "56.0" xsd:float
-property_value: IAO:0000589 "embryonic stage (human)" xsd:string
property_value: start_dpf "0.0" xsd:float
[Term]
@@ -9032,11 +8314,9 @@ xref: EHDAA2:CS03
xref: FMA:295907
xref: XUO:0000132
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker GO:0001835
relationship: immediately_preceded_by HsapDv:0000205 ! morula stage (human)
relationship: part_of UBERON:0000108 ! blastula stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker GO:0001835
-property_value: IAO:0000589 "Carnegie stage 03 (human)" xsd:string
property_value: start_dpf "4.5" xsd:float
[Term]
@@ -9053,9 +8333,7 @@ xref: XUO:0000133
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000007 ! Carnegie stage 03 (human)
relationship: part_of UBERON:0000108 ! blastula stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: editor_notes "Note that GO treats blastocyst attachment and implantation (CS05) as synonymous" xsd:string
-property_value: IAO:0000589 "Carnegie stage 04 (human)" xsd:string
property_value: start_dpf "5.5" xsd:float
[Term]
@@ -9069,11 +8347,9 @@ synonym: "CS04" EXACT []
xref: FMA:295909
xref: XUO:0000134
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker GO:0007566
relationship: immediately_preceded_by HsapDv:0000008 ! Carnegie stage 04 (human)
relationship: part_of UBERON:0000108 ! blastula stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker GO:0007566
-property_value: IAO:0000589 "Carnegie stage 05 (human)" xsd:string
property_value: start_dpf "7.0" xsd:float
[Term]
@@ -9087,13 +8363,11 @@ synonym: "CS06" EXACT []
xref: FMA:295910
xref: XUO:0000135
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0000474
+relationship: has_stage_marker EHDAA2:0001525
relationship: immediately_preceded_by HsapDv:0000009 ! Carnegie stage 05 (human)
relationship: immediately_preceded_by HsapDv:0000033 ! Carnegie stage 05c (human)
relationship: part_of UBERON:0000109 ! gastrula stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0000474
-property_value: has_stage_marker EHDAA2:0001525
-property_value: IAO:0000589 "Carnegie stage 06 (human)" xsd:string
property_value: start_dpf "13.0" xsd:float
[Term]
@@ -9108,12 +8382,10 @@ xref: EHDAA2:CS07
xref: FMA:295911
xref: XUO:0000136
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0001279
relationship: immediately_preceded_by HsapDv:0000011 ! Carnegie stage 06 (human)
relationship: immediately_preceded_by HsapDv:0000035 ! Carnegie stage 06b (human)
relationship: part_of UBERON:0000110 ! neurula stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0001279
-property_value: IAO:0000589 "Carnegie stage 07 (human)" xsd:string
property_value: start_dpf "15.0" xsd:float
[Term]
@@ -9128,12 +8400,10 @@ xref: EHDAA2:CS08
xref: FMA:295912
xref: XUO:0000137
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0001521
+relationship: has_stage_marker UBERON:0013704
relationship: immediately_preceded_by HsapDv:0000013 ! Carnegie stage 07 (human)
relationship: part_of UBERON:0000110 ! neurula stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0001521
-property_value: has_stage_marker UBERON:0013704
-property_value: IAO:0000589 "Carnegie stage 08 (human)" xsd:string
property_value: start_dpf "17.0" xsd:float
[Term]
@@ -9148,15 +8418,13 @@ xref: EHDAA2:CS09
xref: FMA:295913
xref: XUO:0000138
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0000214
+relationship: has_stage_marker EHDAA2:0001249
+relationship: has_stage_marker EHDAA2:0001849
+relationship: has_stage_marker EHDAA2:0001850
+relationship: has_stage_marker EHDAA2:0001851
relationship: immediately_preceded_by HsapDv:0000014 ! Carnegie stage 08 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0000214
-property_value: has_stage_marker EHDAA2:0001249
-property_value: has_stage_marker EHDAA2:0001849
-property_value: has_stage_marker EHDAA2:0001850
-property_value: has_stage_marker EHDAA2:0001851
-property_value: IAO:0000589 "Carnegie stage 09 (human)" xsd:string
property_value: start_dpf "19.0" xsd:float
[Term]
@@ -9171,20 +8439,18 @@ xref: EHDAA2:CS10
xref: FMA:295914
xref: XUO:0000139
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0001852
+relationship: has_stage_marker EHDAA2:0001853
+relationship: has_stage_marker EHDAA2:0001854
+relationship: has_stage_marker EHDAA2:0001855
+relationship: has_stage_marker EHDAA2:0001856
+relationship: has_stage_marker EHDAA2:0001857
+relationship: has_stage_marker EHDAA2:0001858
+relationship: has_stage_marker EHDAA2:0001859
+relationship: has_stage_marker EHDAA2:0001860
+relationship: has_stage_marker GO:0001843
relationship: immediately_preceded_by HsapDv:0000016 ! Carnegie stage 09 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0001852
-property_value: has_stage_marker EHDAA2:0001853
-property_value: has_stage_marker EHDAA2:0001854
-property_value: has_stage_marker EHDAA2:0001855
-property_value: has_stage_marker EHDAA2:0001856
-property_value: has_stage_marker EHDAA2:0001857
-property_value: has_stage_marker EHDAA2:0001858
-property_value: has_stage_marker EHDAA2:0001859
-property_value: has_stage_marker EHDAA2:0001860
-property_value: has_stage_marker GO:0001843
-property_value: IAO:0000589 "Carnegie stage 10 (human)" xsd:string
property_value: start_dpf "22.0" xsd:float
[Term]
@@ -9199,18 +8465,16 @@ xref: EHDAA2:CS11
xref: FMA:295915
xref: XUO:0000140
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0001861
+relationship: has_stage_marker EHDAA2:0001862
+relationship: has_stage_marker EHDAA2:0001863
+relationship: has_stage_marker EHDAA2:0001864
+relationship: has_stage_marker EHDAA2:0001865
+relationship: has_stage_marker EHDAA2:0001866
+relationship: has_stage_marker EHDAA2:0001867
+relationship: has_stage_marker EHDAA2:0001868
relationship: immediately_preceded_by HsapDv:0000017 ! Carnegie stage 10 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0001861
-property_value: has_stage_marker EHDAA2:0001862
-property_value: has_stage_marker EHDAA2:0001863
-property_value: has_stage_marker EHDAA2:0001864
-property_value: has_stage_marker EHDAA2:0001865
-property_value: has_stage_marker EHDAA2:0001866
-property_value: has_stage_marker EHDAA2:0001867
-property_value: has_stage_marker EHDAA2:0001868
-property_value: IAO:0000589 "Carnegie stage 11 (human)" xsd:string
property_value: start_dpf "23.0" xsd:float
[Term]
@@ -9225,20 +8489,18 @@ xref: EHDAA2:CS12
xref: FMA:295916
xref: XUO:0000141
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0001869
+relationship: has_stage_marker EHDAA2:0001870
+relationship: has_stage_marker EHDAA2:0001871
+relationship: has_stage_marker EHDAA2:0001872
+relationship: has_stage_marker EHDAA2:0001873
+relationship: has_stage_marker EHDAA2:0001874
+relationship: has_stage_marker EHDAA2:0001875
+relationship: has_stage_marker EHDAA2:0001876
+relationship: has_stage_marker EHDAA2:0001877
+relationship: has_stage_marker GO:0021507
relationship: immediately_preceded_by HsapDv:0000018 ! Carnegie stage 11 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0001869
-property_value: has_stage_marker EHDAA2:0001870
-property_value: has_stage_marker EHDAA2:0001871
-property_value: has_stage_marker EHDAA2:0001872
-property_value: has_stage_marker EHDAA2:0001873
-property_value: has_stage_marker EHDAA2:0001874
-property_value: has_stage_marker EHDAA2:0001875
-property_value: has_stage_marker EHDAA2:0001876
-property_value: has_stage_marker EHDAA2:0001877
-property_value: has_stage_marker GO:0021507
-property_value: IAO:0000589 "Carnegie stage 12 (human)" xsd:string
property_value: start_dpf "26.0" xsd:float
[Term]
@@ -9253,13 +8515,11 @@ xref: EHDAA2:CS13
xref: FMA:295917
xref: XUO:0000142
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0000982
+relationship: has_stage_marker EHDAA2:0001033
+relationship: has_stage_marker EHDAA2:0001878
relationship: immediately_preceded_by HsapDv:0000019 ! Carnegie stage 12 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0000982
-property_value: has_stage_marker EHDAA2:0001033
-property_value: has_stage_marker EHDAA2:0001878
-property_value: IAO:0000589 "Carnegie stage 13 (human)" xsd:string
property_value: start_dpf "28.0" xsd:float
[Term]
@@ -9274,12 +8534,10 @@ xref: EHDAA2:CS14
xref: FMA:295918
xref: XUO:0000143
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0000981
+relationship: has_stage_marker EHDAA2:0001303
relationship: immediately_preceded_by HsapDv:0000020 ! Carnegie stage 13 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0000981
-property_value: has_stage_marker EHDAA2:0001303
-property_value: IAO:0000589 "Carnegie stage 14 (human)" xsd:string
property_value: start_dpf "31.0" xsd:float
[Term]
@@ -9294,15 +8552,13 @@ xref: EHDAA2:CS15
xref: FMA:295928
xref: XUO:0000144
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0000728
+relationship: has_stage_marker EHDAA2:0000983
+relationship: has_stage_marker UBERON:0005426
+relationship: has_stage_marker UBERON:0005870
+relationship: has_stage_marker UBERON:0006875
relationship: immediately_preceded_by HsapDv:0000021 ! Carnegie stage 14 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0000728
-property_value: has_stage_marker EHDAA2:0000983
-property_value: has_stage_marker UBERON:0005426
-property_value: has_stage_marker UBERON:0005870
-property_value: has_stage_marker UBERON:0006875
-property_value: IAO:0000589 "Carnegie stage 15 (human)" xsd:string
property_value: start_dpf "35.0" xsd:float
[Term]
@@ -9317,13 +8573,11 @@ xref: EHDAA2:CS16
xref: FMA:295919
xref: XUO:0000145
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0000155
+relationship: has_stage_marker EHDAA2:0000546
+relationship: has_stage_marker UBERON:0006871
relationship: immediately_preceded_by HsapDv:0000022 ! Carnegie stage 15 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0000155
-property_value: has_stage_marker EHDAA2:0000546
-property_value: has_stage_marker UBERON:0006871
-property_value: IAO:0000589 "Carnegie stage 16 (human)" xsd:string
property_value: start_dpf "37.0" xsd:float
[Term]
@@ -9340,8 +8594,6 @@ xref: XUO:0000146
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000023 ! Carnegie stage 16 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "Carnegie stage 17 (human)" xsd:string
property_value: start_dpf "42.0" xsd:float
[Term]
@@ -9356,11 +8608,9 @@ xref: EHDAA2:CS18
xref: FMA:295921
xref: XUO:0000147
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker GO:0001503
relationship: immediately_preceded_by HsapDv:0000024 ! Carnegie stage 17 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker GO:0001503
-property_value: IAO:0000589 "Carnegie stage 18 (human)" xsd:string
property_value: start_dpf "44.0" xsd:float
[Term]
@@ -9377,8 +8627,6 @@ xref: XUO:0000148
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000025 ! Carnegie stage 18 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "Carnegie stage 19 (human)" xsd:string
property_value: start_dpf "48.0" xsd:float
[Term]
@@ -9395,8 +8643,6 @@ xref: XUO:0000149
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000026 ! Carnegie stage 19 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "Carnegie stage 20 (human)" xsd:string
property_value: start_dpf "51.0" xsd:float
[Term]
@@ -9412,8 +8658,6 @@ xref: XUO:0000150
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000027 ! Carnegie stage 20 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "Carnegie stage 21 (human)" xsd:string
property_value: start_dpf "53.0" xsd:float
[Term]
@@ -9427,12 +8671,10 @@ synonym: "CS22" EXACT []
xref: FMA:295925
xref: XUO:0000151
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0000462
+relationship: has_stage_marker UBERON:0001711
relationship: immediately_preceded_by HsapDv:0000028 ! Carnegie stage 21 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0000462
-property_value: has_stage_marker UBERON:0001711
-property_value: IAO:0000589 "Carnegie stage 22 (human)" xsd:string
property_value: start_dpf "54.0" xsd:float
[Term]
@@ -9449,8 +8691,6 @@ xref: XUO:0000152
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000029 ! Carnegie stage 22 (human)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "Carnegie stage 23 (human)" xsd:string
property_value: start_dpf "56.0" xsd:float
[Term]
@@ -9466,8 +8706,6 @@ xref: XUO:0000187
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000009 ! Carnegie stage 05 (human)
relationship: part_of HsapDv:0000009 ! Carnegie stage 05 (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "Carnegie stage 05a (human)" xsd:string
[Term]
id: HsapDv:0000032
@@ -9480,11 +8718,9 @@ xref: EHDAA2:CS05b
xref: FMA:296709
xref: XUO:0000188
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0004715
relationship: immediately_preceded_by HsapDv:0000031 ! Carnegie stage 05a (human)
relationship: part_of HsapDv:0000009 ! Carnegie stage 05 (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0004715
-property_value: IAO:0000589 "Carnegie stage 05b (human)" xsd:string
[Term]
id: HsapDv:0000033
@@ -9499,8 +8735,6 @@ xref: XUO:0000189
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000032 ! Carnegie stage 05b (human)
relationship: part_of HsapDv:0000009 ! Carnegie stage 05 (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "Carnegie stage 05c (human)" xsd:string
[Term]
id: HsapDv:0000034
@@ -9512,12 +8746,10 @@ synonym: "CS06a" EXACT [EHDAA2:CS06a]
xref: EHDAA2:CS06a
xref: XUO:0000190
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0004717
relationship: immediately_preceded_by HsapDv:0000009 ! Carnegie stage 05 (human)
relationship: immediately_preceded_by HsapDv:0000033 ! Carnegie stage 05c (human)
relationship: part_of HsapDv:0000011 ! Carnegie stage 06 (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0004717
-property_value: IAO:0000589 "Carnegie stage 06a (human)" xsd:string
[Term]
id: HsapDv:0000035
@@ -9529,11 +8761,9 @@ synonym: "CS06b" EXACT [EHDAA2:CS06b]
xref: EHDAA2:CS06b
xref: XUO:0000191
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker EHDAA2:0001525
relationship: immediately_preceded_by HsapDv:0000034 ! Carnegie stage 06a (human)
relationship: part_of HsapDv:0000011 ! Carnegie stage 06 (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: has_stage_marker EHDAA2:0001525
-property_value: IAO:0000589 "Carnegie stage 06b (human)" xsd:string
[Term]
id: HsapDv:0000046
@@ -9546,9 +8776,7 @@ subset: life_stage
xref: EV:0300012
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of HsapDv:0000197 ! third LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "63.0" xsd:float
-property_value: IAO:0000589 "9th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "56.0" xsd:float
[Term]
@@ -9563,9 +8791,7 @@ xref: EV:0300013
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000046 ! 9th week post-fertilization stage (human)
relationship: part_of HsapDv:0000197 ! third LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "70.0" xsd:float
-property_value: IAO:0000589 "10th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "63.0" xsd:float
[Term]
@@ -9578,13 +8804,11 @@ subset: granular_stage
subset: life_stage
xref: EV:0300030
is_a: UBERON:0000105 ! life cycle stage
+relationship: has_stage_marker UBERON:0001833
+relationship: has_stage_marker UBERON:0007827
relationship: immediately_preceded_by HsapDv:0000047 ! 10th week post-fertilization stage (human)
relationship: part_of HsapDv:0000197 ! third LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "77.0" xsd:float
-property_value: has_stage_marker UBERON:0001833
-property_value: has_stage_marker UBERON:0007827
-property_value: IAO:0000589 "11th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "70.0" xsd:float
[Term]
@@ -9599,9 +8823,7 @@ xref: EV:0300014
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000048 ! 11th week post-fertilization stage (human)
relationship: part_of HsapDv:0000198 ! fourth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "84.0" xsd:float
-property_value: IAO:0000589 "12th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "77.0" xsd:float
[Term]
@@ -9615,9 +8837,7 @@ xref: EV:0300015
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000049 ! 12th week post-fertilization stage (human)
relationship: part_of HsapDv:0000198 ! fourth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "91.0" xsd:float
-property_value: IAO:0000589 "13th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "84.0" xsd:float
[Term]
@@ -9631,9 +8851,7 @@ xref: EV:0300016
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000050 ! 13th week post-fertilization stage (human)
relationship: part_of HsapDv:0000198 ! fourth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "98.0" xsd:float
-property_value: IAO:0000589 "14th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "91.0" xsd:float
[Term]
@@ -9647,9 +8865,7 @@ xref: EV:0300031
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000051 ! 14th week post-fertilization stage (human)
relationship: part_of HsapDv:0000198 ! fourth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "105.0" xsd:float
-property_value: IAO:0000589 "15th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "98.0" xsd:float
[Term]
@@ -9664,9 +8880,7 @@ xref: EV:0300017
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000052 ! 15th week post-fertilization stage (human)
relationship: part_of HsapDv:0000199 ! fifth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "112.0" xsd:float
-property_value: IAO:0000589 "16th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "105.0" xsd:float
[Term]
@@ -9680,9 +8894,7 @@ xref: EV:0300018
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000053 ! 16th week post-fertilization stage (human)
relationship: part_of HsapDv:0000199 ! fifth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "119.0" xsd:float
-property_value: IAO:0000589 "17th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "112.0" xsd:float
[Term]
@@ -9696,9 +8908,7 @@ xref: EV:0300019
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000054 ! 17th week post-fertilization stage (human)
relationship: part_of HsapDv:0000199 ! fifth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "126.0" xsd:float
-property_value: IAO:0000589 "18th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "119.0" xsd:float
[Term]
@@ -9712,9 +8922,7 @@ xref: EV:0300020
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000055 ! 18th week post-fertilization stage (human)
relationship: part_of HsapDv:0000199 ! fifth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "133.0" xsd:float
-property_value: IAO:0000589 "19th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "126.0" xsd:float
[Term]
@@ -9729,9 +8937,7 @@ xref: EV:0300021
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000056 ! 19th week post-fertilization stage (human)
relationship: part_of HsapDv:0000200 ! sixth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "140.0" xsd:float
-property_value: IAO:0000589 "20th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "133.0" xsd:float
[Term]
@@ -9746,9 +8952,7 @@ xref: EV:0300029
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000057 ! 20th week post-fertilization stage (human)
relationship: part_of HsapDv:0000200 ! sixth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "147.0" xsd:float
-property_value: IAO:0000589 "21st week post-fertilization stage (human)" xsd:string
property_value: start_dpf "140.0" xsd:float
[Term]
@@ -9762,9 +8966,7 @@ xref: EV:0300022
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000058 ! 21st week post-fertilization stage (human)
relationship: part_of HsapDv:0000200 ! sixth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "154.0" xsd:float
-property_value: IAO:0000589 "22nd week post-fertilization stage (human)" xsd:string
property_value: start_dpf "147.0" xsd:float
[Term]
@@ -9778,9 +8980,7 @@ xref: EV:0300023
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000059 ! 22nd week post-fertilization stage (human)
relationship: part_of HsapDv:0000200 ! sixth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "161.0" xsd:float
-property_value: IAO:0000589 "23rd week post-fertilization stage (human)" xsd:string
property_value: start_dpf "154.0" xsd:float
[Term]
@@ -9795,9 +8995,7 @@ xref: EV:0300024
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000060 ! 23rd week post-fertilization stage (human)
relationship: part_of HsapDv:0000200 ! sixth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "168.0" xsd:float
-property_value: IAO:0000589 "24th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "161.0" xsd:float
[Term]
@@ -9812,9 +9010,7 @@ xref: EV:0300032
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000061 ! 24th week post-fertilization stage (human)
relationship: part_of HsapDv:0000201 ! seventh LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "175.0" xsd:float
-property_value: IAO:0000589 "25th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "168.0" xsd:float
[Term]
@@ -9828,9 +9024,7 @@ xref: EV:0300025
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000062 ! 25th week post-fertilization stage (human)
relationship: part_of HsapDv:0000201 ! seventh LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "182.0" xsd:float
-property_value: IAO:0000589 "26th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "175.0" xsd:float
[Term]
@@ -9844,9 +9038,7 @@ xref: EV:0300033
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000063 ! 26th week post-fertilization stage (human)
relationship: part_of HsapDv:0000201 ! seventh LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "189.0" xsd:float
-property_value: IAO:0000589 "27th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "182.0" xsd:float
[Term]
@@ -9860,9 +9052,7 @@ xref: EV:0300026
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000064 ! 27th week post-fertilization stage (human)
relationship: part_of HsapDv:0000201 ! seventh LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "196.0" xsd:float
-property_value: IAO:0000589 "28th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "189.0" xsd:float
[Term]
@@ -9877,9 +9067,7 @@ xref: EV:0300034
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000065 ! 28th week post-fertilization stage (human)
relationship: part_of HsapDv:0000202 ! eighth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "203.0" xsd:float
-property_value: IAO:0000589 "29th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "196.0" xsd:float
[Term]
@@ -9893,9 +9081,7 @@ xref: EV:0300035
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000066 ! 29th week post-fertilization stage (human)
relationship: part_of HsapDv:0000202 ! eighth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "210.0" xsd:float
-property_value: IAO:0000589 "30th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "203.0" xsd:float
[Term]
@@ -9909,9 +9095,7 @@ xref: EV:0300036
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000067 ! 30th week post-fertilization stage (human)
relationship: part_of HsapDv:0000202 ! eighth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "217.0" xsd:float
-property_value: IAO:0000589 "31st week post-fertilization stage (human)" xsd:string
property_value: start_dpf "210.0" xsd:float
[Term]
@@ -9925,9 +9109,7 @@ xref: EV:0300027
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000068 ! 31st week post-fertilization stage (human)
relationship: part_of HsapDv:0000202 ! eighth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "224.0" xsd:float
-property_value: IAO:0000589 "32nd week post-fertilization stage (human)" xsd:string
property_value: start_dpf "217.0" xsd:float
[Term]
@@ -9941,9 +9123,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000069 ! 32nd week post-fertilization stage (human)
relationship: part_of HsapDv:0000202 ! eighth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "231.0" xsd:float
-property_value: IAO:0000589 "33rd week post-fertilization stage (human)" xsd:string
property_value: start_dpf "224.0" xsd:float
[Term]
@@ -9956,9 +9136,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000070 ! 33rd week post-fertilization stage (human)
relationship: part_of HsapDv:0000203 ! ninth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "238.0" xsd:float
-property_value: IAO:0000589 "34th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "231.0" xsd:float
[Term]
@@ -9971,9 +9149,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000071 ! 34th week post-fertilization stage (human)
relationship: part_of HsapDv:0000203 ! ninth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "245.0" xsd:float
-property_value: IAO:0000589 "35th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "238.0" xsd:float
[Term]
@@ -9986,9 +9162,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000072 ! 35th week post-fertilization stage (human)
relationship: part_of HsapDv:0000203 ! ninth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "252.0" xsd:float
-property_value: IAO:0000589 "36th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "245.0" xsd:float
[Term]
@@ -10001,9 +9175,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000073 ! 36th week post-fertilization stage (human)
relationship: part_of HsapDv:0000203 ! ninth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "259.0" xsd:float
-property_value: IAO:0000589 "37th week post-fertilization stage (human)" xsd:string
property_value: start_dpf "252.0" xsd:float
[Term]
@@ -10016,9 +9188,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000074 ! 37th week post-fertilization stage (human)
relationship: part_of HsapDv:0000203 ! ninth LMP month stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "266.0" xsd:float
-property_value: IAO:0000589 "38th week post-fertilization and over stage (human)" xsd:string
property_value: start_dpf "259.0" xsd:float
[Term]
@@ -10031,8 +9201,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000173 ! 79-year-old stage (human)
relationship: immediately_preceded_by HsapDv:0000272 ! 60-79 year-old stage (human)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "80 year-old and over stage (human)" xsd:string
property_value: start_ypb "80.0" xsd:float
[Term]
@@ -10045,9 +9213,7 @@ subset: life_stage
xref: EV:0300053
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of HsapDv:0000270 ! 2-4 year-old child stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "3.0" xsd:float
-property_value: IAO:0000589 "2-year-old stage (human)" xsd:string
property_value: start_ypb "2.0" xsd:float
[Term]
@@ -10061,9 +9227,7 @@ xref: EV:0300054
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000096 ! 2-year-old stage (human)
relationship: part_of HsapDv:0000270 ! 2-4 year-old child stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "4.0" xsd:float
-property_value: IAO:0000589 "3-year-old stage (human)" xsd:string
property_value: start_ypb "3.0" xsd:float
[Term]
@@ -10077,9 +9241,7 @@ xref: EV:0300055
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000097 ! 3-year-old stage (human)
relationship: part_of HsapDv:0000270 ! 2-4 year-old child stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "5.0" xsd:float
-property_value: IAO:0000589 "4-year-old stage (human)" xsd:string
property_value: start_ypb "4.0" xsd:float
[Term]
@@ -10093,9 +9255,7 @@ xref: EV:0300056
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000098 ! 4-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "6.0" xsd:float
-property_value: IAO:0000589 "5-year-old stage (human)" xsd:string
property_value: start_ypb "5.0" xsd:float
[Term]
@@ -10109,9 +9269,7 @@ xref: EV:0300057
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000099 ! 5-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "7.0" xsd:float
-property_value: IAO:0000589 "6-year-old stage (human)" xsd:string
property_value: start_ypb "6.0" xsd:float
[Term]
@@ -10125,9 +9283,7 @@ xref: EV:0300058
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000100 ! 6-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "8.0" xsd:float
-property_value: IAO:0000589 "7-year-old stage (human)" xsd:string
property_value: start_ypb "7.0" xsd:float
[Term]
@@ -10141,9 +9297,7 @@ xref: EV:0300059
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000101 ! 7-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "9.0" xsd:float
-property_value: IAO:0000589 "8-year-old stage (human)" xsd:string
property_value: start_ypb "8.0" xsd:float
[Term]
@@ -10157,9 +9311,7 @@ xref: EV:0300060
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000102 ! 8-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "10.0" xsd:float
-property_value: IAO:0000589 "9-year-old stage (human)" xsd:string
property_value: start_ypb "9.0" xsd:float
[Term]
@@ -10173,9 +9325,7 @@ xref: EV:0300061
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000103 ! 9-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "11.0" xsd:float
-property_value: IAO:0000589 "10-year-old stage (human)" xsd:string
property_value: start_ypb "10.0" xsd:float
[Term]
@@ -10189,9 +9339,7 @@ xref: EV:0300062
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000104 ! 10-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "12.0" xsd:float
-property_value: IAO:0000589 "11-year-old stage (human)" xsd:string
property_value: start_ypb "11.0" xsd:float
[Term]
@@ -10205,9 +9353,7 @@ xref: EV:0300063
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000105 ! 11-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "13.0" xsd:float
-property_value: IAO:0000589 "12-year-old stage (human)" xsd:string
property_value: start_ypb "12.0" xsd:float
[Term]
@@ -10221,9 +9367,7 @@ xref: EV:0300065
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000106 ! 12-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "14.0" xsd:float
-property_value: IAO:0000589 "13-year-old stage (human)" xsd:string
property_value: start_ypb "13.0" xsd:float
[Term]
@@ -10237,9 +9381,7 @@ xref: EV:0300066
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000107 ! 13-year-old stage (human)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "15.0" xsd:float
-property_value: IAO:0000589 "14-year-old stage (human)" xsd:string
property_value: start_ypb "14.0" xsd:float
[Term]
@@ -10253,9 +9395,7 @@ xref: EV:0300067
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000108 ! 14-year-old stage (human)
relationship: part_of HsapDv:0000268 ! 15-19 year-old (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "16.0" xsd:float
-property_value: IAO:0000589 "15-year-old stage (human)" xsd:string
property_value: start_ypb "15.0" xsd:float
[Term]
@@ -10269,9 +9409,7 @@ xref: EV:0300068
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000109 ! 15-year-old stage (human)
relationship: part_of HsapDv:0000268 ! 15-19 year-old (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "17.0" xsd:float
-property_value: IAO:0000589 "16-year-old stage (human)" xsd:string
property_value: start_ypb "16.0" xsd:float
[Term]
@@ -10285,9 +9423,7 @@ xref: EV:0300069
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000110 ! 16-year-old stage (human)
relationship: part_of HsapDv:0000268 ! 15-19 year-old (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "18.0" xsd:float
-property_value: IAO:0000589 "17-year-old stage (human)" xsd:string
property_value: start_ypb "17.0" xsd:float
[Term]
@@ -10301,9 +9437,7 @@ xref: EV:0300071
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000111 ! 17-year-old stage (human)
relationship: part_of HsapDv:0000268 ! 15-19 year-old (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "19.0" xsd:float
-property_value: IAO:0000589 "18-year-old stage (human)" xsd:string
property_value: start_ypb "18.0" xsd:float
[Term]
@@ -10317,9 +9451,7 @@ xref: EV:0300072
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000112 ! 18-year-old stage (human)
relationship: part_of HsapDv:0000268 ! 15-19 year-old (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "20.0" xsd:float
-property_value: IAO:0000589 "19-year-old stage (human)" xsd:string
property_value: start_ypb "19.0" xsd:float
[Term]
@@ -10333,9 +9465,7 @@ xref: EV:0300073
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000113 ! 19-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "21.0" xsd:float
-property_value: IAO:0000589 "20-year-old stage (human)" xsd:string
property_value: start_ypb "20.0" xsd:float
[Term]
@@ -10349,9 +9479,7 @@ xref: EV:0300074
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000114 ! 20-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "22.0" xsd:float
-property_value: IAO:0000589 "21-year-old stage (human)" xsd:string
property_value: start_ypb "21.0" xsd:float
[Term]
@@ -10365,9 +9493,7 @@ xref: EV:0300075
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000115 ! 21-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "23.0" xsd:float
-property_value: IAO:0000589 "22-year-old stage (human)" xsd:string
property_value: start_ypb "22.0" xsd:float
[Term]
@@ -10381,9 +9507,7 @@ xref: EV:0300076
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000116 ! 22-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "24.0" xsd:float
-property_value: IAO:0000589 "23-year-old stage (human)" xsd:string
property_value: start_ypb "23.0" xsd:float
[Term]
@@ -10397,9 +9521,7 @@ xref: EV:0300077
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000117 ! 23-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "25.0" xsd:float
-property_value: IAO:0000589 "24-year-old stage (human)" xsd:string
property_value: start_ypb "24.0" xsd:float
[Term]
@@ -10413,9 +9535,7 @@ xref: EV:0300078
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000118 ! 24-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "26.0" xsd:float
-property_value: IAO:0000589 "25-year-old stage (human)" xsd:string
property_value: start_ypb "25.0" xsd:float
[Term]
@@ -10429,9 +9549,7 @@ xref: EV:0300079
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000119 ! 25-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "27.0" xsd:float
-property_value: IAO:0000589 "26-year-old stage (human)" xsd:string
property_value: start_ypb "26.0" xsd:float
[Term]
@@ -10445,9 +9563,7 @@ xref: EV:0300080
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000120 ! 26-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "28.0" xsd:float
-property_value: IAO:0000589 "27-year-old stage (human)" xsd:string
property_value: start_ypb "27.0" xsd:float
[Term]
@@ -10461,9 +9577,7 @@ xref: EV:0300081
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000121 ! 27-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "29.0" xsd:float
-property_value: IAO:0000589 "28-year-old stage (human)" xsd:string
property_value: start_ypb "28.0" xsd:float
[Term]
@@ -10477,9 +9591,7 @@ xref: EV:0300082
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000122 ! 28-year-old stage (human)
relationship: part_of HsapDv:0000237 ! third decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "30.0" xsd:float
-property_value: IAO:0000589 "29-year-old stage (human)" xsd:string
property_value: start_ypb "29.0" xsd:float
[Term]
@@ -10493,9 +9605,7 @@ xref: EV:0300083
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000123 ! 29-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "31.0" xsd:float
-property_value: IAO:0000589 "30-year-old stage (human)" xsd:string
property_value: start_ypb "30.0" xsd:float
[Term]
@@ -10509,9 +9619,7 @@ xref: EV:0300084
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000124 ! 30-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "32.0" xsd:float
-property_value: IAO:0000589 "31-year-old stage (human)" xsd:string
property_value: start_ypb "31.0" xsd:float
[Term]
@@ -10525,9 +9633,7 @@ xref: EV:0300085
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000125 ! 31-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "33.0" xsd:float
-property_value: IAO:0000589 "32-year-old stage (human)" xsd:string
property_value: start_ypb "32.0" xsd:float
[Term]
@@ -10541,9 +9647,7 @@ xref: EV:0300086
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000126 ! 32-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "34.0" xsd:float
-property_value: IAO:0000589 "33-year-old stage (human)" xsd:string
property_value: start_ypb "33.0" xsd:float
[Term]
@@ -10557,9 +9661,7 @@ xref: EV:0300087
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000127 ! 33-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "35.0" xsd:float
-property_value: IAO:0000589 "34-year-old stage (human)" xsd:string
property_value: start_ypb "34.0" xsd:float
[Term]
@@ -10573,9 +9675,7 @@ xref: EV:0300088
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000128 ! 34-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "36.0" xsd:float
-property_value: IAO:0000589 "35-year-old stage (human)" xsd:string
property_value: start_ypb "35.0" xsd:float
[Term]
@@ -10589,9 +9689,7 @@ xref: EV:0300089
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000129 ! 35-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "37.0" xsd:float
-property_value: IAO:0000589 "36-year-old stage (human)" xsd:string
property_value: start_ypb "36.0" xsd:float
[Term]
@@ -10605,9 +9703,7 @@ xref: EV:0300090
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000130 ! 36-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "38.0" xsd:float
-property_value: IAO:0000589 "37-year-old stage (human)" xsd:string
property_value: start_ypb "37.0" xsd:float
[Term]
@@ -10621,9 +9717,7 @@ xref: EV:0300091
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000131 ! 37-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "39.0" xsd:float
-property_value: IAO:0000589 "38-year-old stage (human)" xsd:string
property_value: start_ypb "38.0" xsd:float
[Term]
@@ -10637,9 +9731,7 @@ xref: EV:0300092
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000132 ! 38-year-old stage (human)
relationship: part_of HsapDv:0000238 ! fourth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "40.0" xsd:float
-property_value: IAO:0000589 "39-year-old stage (human)" xsd:string
property_value: start_ypb "39.0" xsd:float
[Term]
@@ -10653,9 +9745,7 @@ xref: EV:0300093
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000133 ! 39-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "41.0" xsd:float
-property_value: IAO:0000589 "40-year-old stage (human)" xsd:string
property_value: start_ypb "40.0" xsd:float
[Term]
@@ -10669,9 +9759,7 @@ xref: EV:0300094
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000134 ! 40-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "42.0" xsd:float
-property_value: IAO:0000589 "41-year-old stage (human)" xsd:string
property_value: start_ypb "41.0" xsd:float
[Term]
@@ -10685,9 +9773,7 @@ xref: EV:0300095
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000135 ! 41-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "43.0" xsd:float
-property_value: IAO:0000589 "42-year-old stage (human)" xsd:string
property_value: start_ypb "42.0" xsd:float
[Term]
@@ -10701,9 +9787,7 @@ xref: EV:0300096
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000136 ! 42-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "44.0" xsd:float
-property_value: IAO:0000589 "43-year-old stage (human)" xsd:string
property_value: start_ypb "43.0" xsd:float
[Term]
@@ -10717,9 +9801,7 @@ xref: EV:0300097
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000137 ! 43-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "45.0" xsd:float
-property_value: IAO:0000589 "44-year-old stage (human)" xsd:string
property_value: start_ypb "44.0" xsd:float
[Term]
@@ -10733,9 +9815,7 @@ xref: EV:0300098
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000138 ! 44-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "46.0" xsd:float
-property_value: IAO:0000589 "45-year-old stage (human)" xsd:string
property_value: start_ypb "45.0" xsd:float
[Term]
@@ -10749,9 +9829,7 @@ xref: EV:0300099
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000139 ! 45-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "47.0" xsd:float
-property_value: IAO:0000589 "46-year-old stage (human)" xsd:string
property_value: start_ypb "46.0" xsd:float
[Term]
@@ -10765,9 +9843,7 @@ xref: EV:0300100
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000140 ! 46-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "48.0" xsd:float
-property_value: IAO:0000589 "47-year-old stage (human)" xsd:string
property_value: start_ypb "47.0" xsd:float
[Term]
@@ -10781,9 +9857,7 @@ xref: EV:0300101
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000141 ! 47-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "49.0" xsd:float
-property_value: IAO:0000589 "48-year-old stage (human)" xsd:string
property_value: start_ypb "48.0" xsd:float
[Term]
@@ -10797,9 +9871,7 @@ xref: EV:0300102
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000142 ! 48-year-old stage (human)
relationship: part_of HsapDv:0000239 ! fifth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "50.0" xsd:float
-property_value: IAO:0000589 "49-year-old stage (human)" xsd:string
property_value: start_ypb "49.0" xsd:float
[Term]
@@ -10813,9 +9885,7 @@ xref: EV:0300103
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000143 ! 49-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "51.0" xsd:float
-property_value: IAO:0000589 "50-year-old stage (human)" xsd:string
property_value: start_ypb "50.0" xsd:float
[Term]
@@ -10829,9 +9899,7 @@ xref: EV:0300104
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000144 ! 50-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "52.0" xsd:float
-property_value: IAO:0000589 "51-year-old stage (human)" xsd:string
property_value: start_ypb "51.0" xsd:float
[Term]
@@ -10845,9 +9913,7 @@ xref: EV:0300105
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000145 ! 51-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "53.0" xsd:float
-property_value: IAO:0000589 "52-year-old stage (human)" xsd:string
property_value: start_ypb "52.0" xsd:float
[Term]
@@ -10861,9 +9927,7 @@ xref: EV:0300106
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000146 ! 52-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "54.0" xsd:float
-property_value: IAO:0000589 "53-year-old stage (human)" xsd:string
property_value: start_ypb "53.0" xsd:float
[Term]
@@ -10877,9 +9941,7 @@ xref: EV:0300107
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000147 ! 53-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "55.0" xsd:float
-property_value: IAO:0000589 "54-year-old stage (human)" xsd:string
property_value: start_ypb "54.0" xsd:float
[Term]
@@ -10893,9 +9955,7 @@ xref: EV:0300108
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000148 ! 54-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "56.0" xsd:float
-property_value: IAO:0000589 "55-year-old stage (human)" xsd:string
property_value: start_ypb "55.0" xsd:float
[Term]
@@ -10909,9 +9969,7 @@ xref: EV:0300109
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000149 ! 55-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "57.0" xsd:float
-property_value: IAO:0000589 "56-year-old stage (human)" xsd:string
property_value: start_ypb "56.0" xsd:float
[Term]
@@ -10925,9 +9983,7 @@ xref: EV:0300110
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000150 ! 56-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "58.0" xsd:float
-property_value: IAO:0000589 "57-year-old stage (human)" xsd:string
property_value: start_ypb "57.0" xsd:float
[Term]
@@ -10941,9 +9997,7 @@ xref: EV:0300111
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000151 ! 57-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "59.0" xsd:float
-property_value: IAO:0000589 "58-year-old stage (human)" xsd:string
property_value: start_ypb "58.0" xsd:float
[Term]
@@ -10957,9 +10011,7 @@ xref: EV:0300112
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000152 ! 58-year-old stage (human)
relationship: part_of HsapDv:0000240 ! sixth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "60.0" xsd:float
-property_value: IAO:0000589 "59-year-old stage (human)" xsd:string
property_value: start_ypb "59.0" xsd:float
[Term]
@@ -10973,9 +10025,7 @@ xref: EV:0300113
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000153 ! 59-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "61.0" xsd:float
-property_value: IAO:0000589 "60-year-old stage (human)" xsd:string
property_value: start_ypb "60.0" xsd:float
[Term]
@@ -10989,9 +10039,7 @@ xref: EV:0300114
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000154 ! 60-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "62.0" xsd:float
-property_value: IAO:0000589 "61-year-old stage (human)" xsd:string
property_value: start_ypb "61.0" xsd:float
[Term]
@@ -11005,9 +10053,7 @@ xref: EV:0300115
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000155 ! 61-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "63.0" xsd:float
-property_value: IAO:0000589 "62-year-old stage (human)" xsd:string
property_value: start_ypb "62.0" xsd:float
[Term]
@@ -11021,9 +10067,7 @@ xref: EV:0300116
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000156 ! 62-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "64.0" xsd:float
-property_value: IAO:0000589 "63-year-old stage (human)" xsd:string
property_value: start_ypb "63.0" xsd:float
[Term]
@@ -11037,9 +10081,7 @@ xref: EV:0300117
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000157 ! 63-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "65.0" xsd:float
-property_value: IAO:0000589 "64-year-old stage (human)" xsd:string
property_value: start_ypb "64.0" xsd:float
[Term]
@@ -11053,9 +10095,7 @@ xref: EV:0300118
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000158 ! 64-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "66.0" xsd:float
-property_value: IAO:0000589 "65-year-old stage (human)" xsd:string
property_value: start_ypb "65.0" xsd:float
[Term]
@@ -11069,9 +10109,7 @@ xref: EV:0300119
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000159 ! 65-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "67.0" xsd:float
-property_value: IAO:0000589 "66-year-old stage (human)" xsd:string
property_value: start_ypb "66.0" xsd:float
[Term]
@@ -11085,9 +10123,7 @@ xref: EV:0300120
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000160 ! 66-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "68.0" xsd:float
-property_value: IAO:0000589 "67-year-old stage (human)" xsd:string
property_value: start_ypb "67.0" xsd:float
[Term]
@@ -11101,9 +10137,7 @@ xref: EV:0300121
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000161 ! 67-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "69.0" xsd:float
-property_value: IAO:0000589 "68-year-old stage (human)" xsd:string
property_value: start_ypb "68.0" xsd:float
[Term]
@@ -11117,9 +10151,7 @@ xref: EV:0300122
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000162 ! 68-year-old stage (human)
relationship: part_of HsapDv:0000241 ! seventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "70.0" xsd:float
-property_value: IAO:0000589 "69-year-old stage (human)" xsd:string
property_value: start_ypb "69.0" xsd:float
[Term]
@@ -11133,9 +10165,7 @@ xref: EV:0300124
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000163 ! 69-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "71.0" xsd:float
-property_value: IAO:0000589 "70-year-old stage (human)" xsd:string
property_value: start_ypb "70.0" xsd:float
[Term]
@@ -11149,9 +10179,7 @@ xref: EV:0300125
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000164 ! 70-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "72.0" xsd:float
-property_value: IAO:0000589 "71-year-old stage (human)" xsd:string
property_value: start_ypb "71.0" xsd:float
[Term]
@@ -11165,9 +10193,7 @@ xref: EV:0300126
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000165 ! 71-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "73.0" xsd:float
-property_value: IAO:0000589 "72-year-old stage (human)" xsd:string
property_value: start_ypb "72.0" xsd:float
[Term]
@@ -11181,9 +10207,7 @@ xref: EV:0300127
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000166 ! 72-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "74.0" xsd:float
-property_value: IAO:0000589 "73-year-old stage (human)" xsd:string
property_value: start_ypb "73.0" xsd:float
[Term]
@@ -11197,9 +10221,7 @@ xref: EV:0300128
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000167 ! 73-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "75.0" xsd:float
-property_value: IAO:0000589 "74-year-old stage (human)" xsd:string
property_value: start_ypb "74.0" xsd:float
[Term]
@@ -11213,9 +10235,7 @@ xref: EV:0300129
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000168 ! 74-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "76.0" xsd:float
-property_value: IAO:0000589 "75-year-old stage (human)" xsd:string
property_value: start_ypb "75.0" xsd:float
[Term]
@@ -11229,9 +10249,7 @@ xref: EV:0300130
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000169 ! 75-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "77.0" xsd:float
-property_value: IAO:0000589 "76-year-old stage (human)" xsd:string
property_value: start_ypb "76.0" xsd:float
[Term]
@@ -11245,9 +10263,7 @@ xref: EV:0300131
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000170 ! 76-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "78.0" xsd:float
-property_value: IAO:0000589 "77-year-old stage (human)" xsd:string
property_value: start_ypb "77.0" xsd:float
[Term]
@@ -11261,9 +10277,7 @@ xref: EV:0300132
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000171 ! 77-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "79.0" xsd:float
-property_value: IAO:0000589 "78-year-old stage (human)" xsd:string
property_value: start_ypb "78.0" xsd:float
[Term]
@@ -11277,9 +10291,7 @@ xref: EV:0300133
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000172 ! 78-year-old stage (human)
relationship: part_of HsapDv:0000242 ! eighth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "80.0" xsd:float
-property_value: IAO:0000589 "79-year-old stage (human)" xsd:string
property_value: start_ypb "79.0" xsd:float
[Term]
@@ -11293,9 +10305,7 @@ xref: EV:0300040
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000273 ! 1-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "3.0" xsd:float
-property_value: IAO:0000589 "2-month-old stage (human)" xsd:string
property_value: start_mpb "2.0" xsd:float
[Term]
@@ -11309,9 +10319,7 @@ xref: EV:0300041
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000175 ! 2-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "4.0" xsd:float
-property_value: IAO:0000589 "3-month-old stage (human)" xsd:string
property_value: start_mpb "3.0" xsd:float
[Term]
@@ -11325,9 +10333,7 @@ xref: EV:0300042
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000176 ! 3-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "5.0" xsd:float
-property_value: IAO:0000589 "4-month-old stage (human)" xsd:string
property_value: start_mpb "4.0" xsd:float
[Term]
@@ -11341,9 +10347,7 @@ xref: EV:0300043
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000177 ! 4-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "6.0" xsd:float
-property_value: IAO:0000589 "5-month-old stage (human)" xsd:string
property_value: start_mpb "5.0" xsd:float
[Term]
@@ -11357,9 +10361,7 @@ xref: EV:0300044
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000178 ! 5-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "7.0" xsd:float
-property_value: IAO:0000589 "6-month-old stage (human)" xsd:string
property_value: start_mpb "6.0" xsd:float
[Term]
@@ -11373,9 +10375,7 @@ xref: EV:0300045
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000179 ! 6-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "8.0" xsd:float
-property_value: IAO:0000589 "7-month-old stage (human)" xsd:string
property_value: start_mpb "7.0" xsd:float
[Term]
@@ -11389,9 +10389,7 @@ xref: EV:0300046
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000180 ! 7-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "9.0" xsd:float
-property_value: IAO:0000589 "8-month-old stage (human)" xsd:string
property_value: start_mpb "8.0" xsd:float
[Term]
@@ -11405,9 +10403,7 @@ xref: EV:0300047
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000181 ! 8-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "9-month-old stage (human)" xsd:string
property_value: start_mpb "9.0" xsd:float
[Term]
@@ -11421,9 +10417,7 @@ xref: EV:0300048
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000182 ! 9-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "11.0" xsd:float
-property_value: IAO:0000589 "10-month-old stage (human)" xsd:string
property_value: start_mpb "10.0" xsd:float
[Term]
@@ -11437,9 +10431,7 @@ xref: EV:0300049
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000183 ! 10-month-old stage (human)
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "12.0" xsd:float
-property_value: IAO:0000589 "11-month-old stage (human)" xsd:string
property_value: start_mpb "11.0" xsd:float
[Term]
@@ -11452,9 +10444,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000184 ! 11-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "13.0" xsd:float
-property_value: IAO:0000589 "12-month-old stage (human)" xsd:string
property_value: start_mpb "12.0" xsd:float
[Term]
@@ -11467,9 +10457,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000185 ! 12-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "14.0" xsd:float
-property_value: IAO:0000589 "13-month-old stage (human)" xsd:string
property_value: start_mpb "13.0" xsd:float
[Term]
@@ -11482,9 +10470,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000186 ! 13-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "15.0" xsd:float
-property_value: IAO:0000589 "14-month-old stage (human)" xsd:string
property_value: start_mpb "14.0" xsd:float
[Term]
@@ -11497,9 +10483,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000187 ! 14-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "16.0" xsd:float
-property_value: IAO:0000589 "15-month-old stage (human)" xsd:string
property_value: start_mpb "15.0" xsd:float
[Term]
@@ -11512,9 +10496,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000188 ! 15-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "17.0" xsd:float
-property_value: IAO:0000589 "16-month-old stage (human)" xsd:string
property_value: start_mpb "16.0" xsd:float
[Term]
@@ -11527,9 +10509,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000189 ! 16-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "18.0" xsd:float
-property_value: IAO:0000589 "17-month-old stage (human)" xsd:string
property_value: start_mpb "17.0" xsd:float
[Term]
@@ -11542,9 +10522,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000190 ! 17-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "19.0" xsd:float
-property_value: IAO:0000589 "18-month-old stage (human)" xsd:string
property_value: start_mpb "18.0" xsd:float
[Term]
@@ -11557,9 +10535,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000191 ! 18-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "20.0" xsd:float
-property_value: IAO:0000589 "19-month-old stage (human)" xsd:string
property_value: start_mpb "19.0" xsd:float
[Term]
@@ -11572,9 +10548,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000192 ! 19-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "21.0" xsd:float
-property_value: IAO:0000589 "20-month-old stage (human)" xsd:string
property_value: start_mpb "20.0" xsd:float
[Term]
@@ -11587,9 +10561,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000193 ! 20-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "22.0" xsd:float
-property_value: IAO:0000589 "21-month-old stage (human)" xsd:string
property_value: start_mpb "21.0" xsd:float
[Term]
@@ -11602,9 +10574,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000194 ! 21-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "23.0" xsd:float
-property_value: IAO:0000589 "22-month-old stage (human)" xsd:string
property_value: start_mpb "22.0" xsd:float
[Term]
@@ -11617,10 +10587,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000195 ! 22-month-old stage (human)
relationship: part_of HsapDv:0000246 ! 1-year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "24.0" xsd:float
property_value: end_ypb "2.0" xsd:float
-property_value: IAO:0000589 "23-month-old stage (human)" xsd:string
property_value: start_mpb "23.0" xsd:float
[Term]
@@ -11631,10 +10599,8 @@ def: "Fetal stage that refers to the third month of gestation starting from the
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0007220 ! late embryonic stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "77.0" xsd:float
-property_value: Gestational_age "3.0" xsd:float
-property_value: IAO:0000589 "third LMP month stage (human)" xsd:string
+property_value: month_of_gestation "3.0" xsd:float
property_value: start_dpf "56.0" xsd:float
[Term]
@@ -11646,10 +10612,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000197 ! third LMP month stage (human)
relationship: part_of UBERON:0007220 ! late embryonic stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "105.0" xsd:float
-property_value: Gestational_age "4.0" xsd:float
-property_value: IAO:0000589 "fourth LMP month stage (human)" xsd:string
+property_value: month_of_gestation "4.0" xsd:float
property_value: start_dpf "77.0" xsd:float
[Term]
@@ -11661,10 +10625,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000198 ! fourth LMP month stage (human)
relationship: part_of UBERON:0007220 ! late embryonic stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "133.0" xsd:float
-property_value: Gestational_age "5.0" xsd:float
-property_value: IAO:0000589 "fifth LMP month stage (human)" xsd:string
+property_value: month_of_gestation "5.0" xsd:float
property_value: start_dpf "105.0" xsd:float
[Term]
@@ -11676,10 +10638,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000199 ! fifth LMP month stage (human)
relationship: part_of UBERON:0007220 ! late embryonic stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "168.0" xsd:float
-property_value: Gestational_age "6.0" xsd:float
-property_value: IAO:0000589 "sixth LMP month stage (human)" xsd:string
+property_value: month_of_gestation "6.0" xsd:float
property_value: start_dpf "133.0" xsd:float
[Term]
@@ -11691,10 +10651,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000200 ! sixth LMP month stage (human)
relationship: part_of UBERON:0007220 ! late embryonic stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "196.0" xsd:float
-property_value: Gestational_age "7.0" xsd:float
-property_value: IAO:0000589 "seventh LMP month stage (human)" xsd:string
+property_value: month_of_gestation "7.0" xsd:float
property_value: start_dpf "168.0" xsd:float
[Term]
@@ -11706,10 +10664,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000201 ! seventh LMP month stage (human)
relationship: part_of UBERON:0007220 ! late embryonic stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "231.0" xsd:float
-property_value: Gestational_age "8.0" xsd:float
-property_value: IAO:0000589 "eighth LMP month stage (human)" xsd:string
+property_value: month_of_gestation "8.0" xsd:float
property_value: start_dpf "196.0" xsd:float
[Term]
@@ -11721,10 +10677,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000202 ! eighth LMP month stage (human)
relationship: part_of UBERON:0007220 ! late embryonic stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_dpf "266.0" xsd:float
-property_value: Gestational_age "9.0" xsd:float
-property_value: IAO:0000589 "ninth LMP month stage (human)" xsd:string
+property_value: month_of_gestation "9.0" xsd:float
property_value: start_dpf "231.0" xsd:float
[Term]
@@ -11735,8 +10689,6 @@ def: "The morula stage is the later part of Carnegie stage 02 when the cells hav
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000107 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
-property_value: IAO:0000589 "morula stage (human)" xsd:string
[Term]
id: HsapDv:0000206
@@ -11747,9 +10699,7 @@ subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "81.0" xsd:float
-property_value: IAO:0000589 "80-year-old stage (human)" xsd:string
property_value: start_ypb "80.0" xsd:float
[Term]
@@ -11762,9 +10712,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000206 ! 80-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "82.0" xsd:float
-property_value: IAO:0000589 "81-year-old stage (human)" xsd:string
property_value: start_ypb "81.0" xsd:float
[Term]
@@ -11777,9 +10725,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000207 ! 81-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "83.0" xsd:float
-property_value: IAO:0000589 "82-year-old stage (human)" xsd:string
property_value: start_ypb "82.0" xsd:float
[Term]
@@ -11792,9 +10738,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000208 ! 82-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "84.0" xsd:float
-property_value: IAO:0000589 "83-year-old stage (human)" xsd:string
property_value: start_ypb "83.0" xsd:float
[Term]
@@ -11807,9 +10751,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000209 ! 83-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "85.0" xsd:float
-property_value: IAO:0000589 "84-year-old stage (human)" xsd:string
property_value: start_ypb "84.0" xsd:float
[Term]
@@ -11822,9 +10764,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000210 ! 84-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "86.0" xsd:float
-property_value: IAO:0000589 "85-year-old stage (human)" xsd:string
property_value: start_ypb "85.0" xsd:float
[Term]
@@ -11837,9 +10777,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000211 ! 85-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "87.0" xsd:float
-property_value: IAO:0000589 "86-year-old stage (human)" xsd:string
property_value: start_ypb "86.0" xsd:float
[Term]
@@ -11852,9 +10790,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000212 ! 86-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "88.0" xsd:float
-property_value: IAO:0000589 "87-year-old stage (human)" xsd:string
property_value: start_ypb "87.0" xsd:float
[Term]
@@ -11867,9 +10803,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000213 ! 87-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "89.0" xsd:float
-property_value: IAO:0000589 "88-year-old stage (human)" xsd:string
property_value: start_ypb "88.0" xsd:float
[Term]
@@ -11882,9 +10816,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000214 ! 88-year-old stage (human)
relationship: part_of HsapDv:0000243 ! ninth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "90.0" xsd:float
-property_value: IAO:0000589 "89-year-old stage (human)" xsd:string
property_value: start_ypb "89.0" xsd:float
[Term]
@@ -11897,9 +10829,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000215 ! 89-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "91.0" xsd:float
-property_value: IAO:0000589 "90-year-old stage (human)" xsd:string
property_value: start_ypb "90.0" xsd:float
[Term]
@@ -11912,9 +10842,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000216 ! 90-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "92.0" xsd:float
-property_value: IAO:0000589 "91-year-old stage (human)" xsd:string
property_value: start_ypb "91.0" xsd:float
[Term]
@@ -11927,9 +10855,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000217 ! 91-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "93.0" xsd:float
-property_value: IAO:0000589 "92-year-old stage (human)" xsd:string
property_value: start_ypb "92.0" xsd:float
[Term]
@@ -11942,9 +10868,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000218 ! 92-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "94.0" xsd:float
-property_value: IAO:0000589 "93-year-old stage (human)" xsd:string
property_value: start_ypb "93.0" xsd:float
[Term]
@@ -11957,9 +10881,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000219 ! 93-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "95.0" xsd:float
-property_value: IAO:0000589 "94-year-old stage (human)" xsd:string
property_value: start_ypb "94.0" xsd:float
[Term]
@@ -11972,9 +10894,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000220 ! 94-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "96.0" xsd:float
-property_value: IAO:0000589 "95-year-old stage (human)" xsd:string
property_value: start_ypb "95.0" xsd:float
[Term]
@@ -11987,9 +10907,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000221 ! 95-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "97.0" xsd:float
-property_value: IAO:0000589 "96-year-old stage (human)" xsd:string
property_value: start_ypb "96.0" xsd:float
[Term]
@@ -12002,9 +10920,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000222 ! 96-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "98.0" xsd:float
-property_value: IAO:0000589 "97-year-old stage (human)" xsd:string
property_value: start_ypb "97.0" xsd:float
[Term]
@@ -12017,9 +10933,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000223 ! 97-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "99.0" xsd:float
-property_value: IAO:0000589 "98-year-old stage (human)" xsd:string
property_value: start_ypb "98.0" xsd:float
[Term]
@@ -12032,9 +10946,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000224 ! 98-year-old stage (human)
relationship: part_of HsapDv:0000244 ! tenth decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "100.0" xsd:float
-property_value: IAO:0000589 "99-year-old stage (human)" xsd:string
property_value: start_ypb "99.0" xsd:float
[Term]
@@ -12047,9 +10959,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000225 ! 99-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "101.0" xsd:float
-property_value: IAO:0000589 "100-year-old stage (human)" xsd:string
property_value: start_ypb "100.0" xsd:float
[Term]
@@ -12062,9 +10972,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000228 ! 100-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "102.0" xsd:float
-property_value: IAO:0000589 "101-year-old stage (human)" xsd:string
property_value: start_ypb "101.0" xsd:float
[Term]
@@ -12077,9 +10985,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000229 ! 101-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "103.0" xsd:float
-property_value: IAO:0000589 "102-year-old stage (human)" xsd:string
property_value: start_ypb "102.0" xsd:float
[Term]
@@ -12092,9 +10998,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000230 ! 102-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "104.0" xsd:float
-property_value: IAO:0000589 "103-year-old stage (human)" xsd:string
property_value: start_ypb "103.0" xsd:float
[Term]
@@ -12107,9 +11011,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000231 ! 103-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "105.0" xsd:float
-property_value: IAO:0000589 "104-year-old stage (human)" xsd:string
property_value: start_ypb "104.0" xsd:float
[Term]
@@ -12122,9 +11024,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000232 ! 104-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "106.0" xsd:float
-property_value: IAO:0000589 "105-year-old stage (human)" xsd:string
property_value: start_ypb "105.0" xsd:float
[Term]
@@ -12137,9 +11037,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000233 ! 105-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "107.0" xsd:float
-property_value: IAO:0000589 "106-year-old stage (human)" xsd:string
property_value: start_ypb "106.0" xsd:float
[Term]
@@ -12151,9 +11049,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000268 ! 15-19 year-old (human)
relationship: part_of HsapDv:0000266 ! young adult stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "30.0" xsd:float
-property_value: IAO:0000589 "third decade stage (human)" xsd:string
property_value: start_ypb "20.0" xsd:float
[Term]
@@ -12165,9 +11061,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000237 ! third decade stage (human)
relationship: part_of HsapDv:0000266 ! young adult stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "40.0" xsd:float
-property_value: IAO:0000589 "fourth decade stage (human)" xsd:string
property_value: start_ypb "30.0" xsd:float
[Term]
@@ -12179,9 +11073,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000238 ! fourth decade stage (human)
relationship: part_of HsapDv:0000267 ! middle aged stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "50.0" xsd:float
-property_value: IAO:0000589 "fifth decade stage (human)" xsd:string
property_value: start_ypb "40.0" xsd:float
[Term]
@@ -12193,9 +11085,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000239 ! fifth decade stage (human)
relationship: part_of HsapDv:0000267 ! middle aged stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "60.0" xsd:float
-property_value: IAO:0000589 "sixth decade stage (human)" xsd:string
property_value: start_ypb "50.0" xsd:float
[Term]
@@ -12207,9 +11097,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000240 ! sixth decade stage (human)
relationship: part_of HsapDv:0000272 ! 60-79 year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "70.0" xsd:float
-property_value: IAO:0000589 "seventh decade stage (human)" xsd:string
property_value: start_ypb "60.0" xsd:float
[Term]
@@ -12221,9 +11109,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000241 ! seventh decade stage (human)
relationship: part_of HsapDv:0000272 ! 60-79 year-old stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "80.0" xsd:float
-property_value: IAO:0000589 "eighth decade stage (human)" xsd:string
property_value: start_ypb "70.0" xsd:float
[Term]
@@ -12235,9 +11121,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000242 ! eighth decade stage (human)
relationship: part_of HsapDv:0000095 ! 80 year-old and over stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "90.0" xsd:float
-property_value: IAO:0000589 "ninth decade stage (human)" xsd:string
property_value: start_ypb "80.0" xsd:float
[Term]
@@ -12248,10 +11132,8 @@ def: "Human stage that refers to an individual who is over 90 and under 100 year
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000243 ! ninth decade stage (human)
-relationship: part_of HsapDv:0000095 ! 80 year-old and over stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
+relationship: part_of HsapDv:0000274 ! 90 year-old and over stage (human)
property_value: end_ypb "100.0" xsd:float
-property_value: IAO:0000589 "tenth decade stage (human)" xsd:string
property_value: start_ypb "90.0" xsd:float
[Term]
@@ -12263,9 +11145,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000244 ! tenth decade stage (human)
relationship: part_of HsapDv:0000247 ! centenarian stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "110.0" xsd:float
-property_value: IAO:0000589 "eleventh decade stage (human)" xsd:string
property_value: start_ypb "100.0" xsd:float
[Term]
@@ -12277,10 +11157,8 @@ subset: life_stage
synonym: "12-23 months" EXACT []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of HsapDv:0000265 ! child stage (1-4 yo) (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "24.0" xsd:float
property_value: end_ypb "2.0" xsd:float
-property_value: IAO:0000589 "1-year-old stage (human)" xsd:string
property_value: start_mpb "12.0" xsd:float
property_value: start_ypb "1.0" xsd:float
@@ -12294,10 +11172,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000225 ! 99-year-old stage (human)
relationship: immediately_preceded_by HsapDv:0000244 ! tenth decade stage (human)
-relationship: part_of HsapDv:0000095 ! 80 year-old and over stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
+relationship: part_of HsapDv:0000274 ! 90 year-old and over stage (human)
property_value: end_ypb "101.0" xsd:float
-property_value: IAO:0000589 "centenarian stage (human)" xsd:string
property_value: start_ypb "100.0" xsd:float
[Term]
@@ -12310,9 +11186,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000234 ! 106-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "108.0" xsd:float
-property_value: IAO:0000589 "107-year-old stage (human)" xsd:string
property_value: start_ypb "107.0" xsd:float
[Term]
@@ -12325,9 +11199,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000248 ! 107-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "109.0" xsd:float
-property_value: IAO:0000589 "108-year-old stage (human)" xsd:string
property_value: start_ypb "108.0" xsd:float
[Term]
@@ -12340,9 +11212,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000249 ! 108-year-old stage (human)
relationship: part_of HsapDv:0000245 ! eleventh decade stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "110.0" xsd:float
-property_value: IAO:0000589 "109-year-old stage (human)" xsd:string
property_value: start_ypb "109.0" xsd:float
[Term]
@@ -12355,9 +11225,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000250 ! 109-year-old stage (human)
relationship: part_of HsapDv:0000247 ! centenarian stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "111.0" xsd:float
-property_value: IAO:0000589 "110-year-old stage (human)" xsd:string
property_value: start_ypb "110.0" xsd:float
[Term]
@@ -12370,9 +11238,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000251 ! 110-year-old stage (human)
relationship: part_of HsapDv:0000247 ! centenarian stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "112.0" xsd:float
-property_value: IAO:0000589 "111-year-old stage (human)" xsd:string
property_value: start_ypb "111.0" xsd:float
[Term]
@@ -12385,9 +11251,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000252 ! 111-year-old stage (human)
relationship: part_of HsapDv:0000247 ! centenarian stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "113.0" xsd:float
-property_value: IAO:0000589 "112-year-old stage (human)" xsd:string
property_value: start_ypb "112.0" xsd:float
[Term]
@@ -12400,9 +11264,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000253 ! 112-year-old stage (human)
relationship: part_of HsapDv:0000247 ! centenarian stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "114.0" xsd:float
-property_value: IAO:0000589 "113-year-old stage (human)" xsd:string
property_value: start_ypb "113.0" xsd:float
[Term]
@@ -12415,9 +11277,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000254 ! 113-year-old stage (human)
relationship: part_of HsapDv:0000247 ! centenarian stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "115.0" xsd:float
-property_value: IAO:0000589 "114-year-old stage (human)" xsd:string
property_value: start_ypb "114.0" xsd:float
[Term]
@@ -12433,9 +11293,7 @@ xref: HP:0011463
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by UBERON:0034920 ! infant stage
relationship: part_of UBERON:0000112 ! sexually immature stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "5.0" xsd:float
-property_value: IAO:0000589 "child stage (1-4 yo) (human)" xsd:string
property_value: start_ypb "1.0" xsd:float
[Term]
@@ -12447,9 +11305,7 @@ subset: life_stage
xref: HP:0011462
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "40.0" xsd:float
-property_value: IAO:0000589 "young adult stage (human)" xsd:string
property_value: start_ypb "15.0" xsd:float
[Term]
@@ -12462,9 +11318,7 @@ xref: HP:0003596
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000266 ! young adult stage (human)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "60.0" xsd:float
-property_value: IAO:0000589 "middle aged stage (human)" xsd:string
property_value: start_ypb "40.0" xsd:float
[Term]
@@ -12476,9 +11330,7 @@ subset: life_stage
synonym: "adolescent" RELATED []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of HsapDv:0000266 ! young adult stage (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "20.0" xsd:float
-property_value: IAO:0000589 "15-19 year-old (human)" xsd:string
property_value: start_ypb "15.0" xsd:float
[Term]
@@ -12491,9 +11343,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by HsapDv:0000246 ! 1-year-old stage (human)
relationship: part_of HsapDv:0000265 ! child stage (1-4 yo) (human)
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "5.0" xsd:float
-property_value: IAO:0000589 "2-4 year-old child stage (human)" xsd:string
property_value: start_ypb "2.0" xsd:float
[Term]
@@ -12505,9 +11355,7 @@ subset: life_stage
synonym: "elderly" RELATED []
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_ypb "80.0" xsd:float
-property_value: IAO:0000589 "60-79 year-old stage (human)" xsd:string
property_value: start_ypb "60.0" xsd:float
[Term]
@@ -12520,11 +11368,20 @@ subset: life_stage
xref: EV:0300039
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens
property_value: end_mpb "2.0" xsd:float
-property_value: IAO:0000589 "1-month-old stage (human)" xsd:string
property_value: start_mpb "0.92" xsd:float
+[Term]
+id: HsapDv:0000274
+name: 90 year-old and over stage (human)
+namespace: human_developmental_stage
+def: "Human stage that refers to an adult who is over 90." [https://github.com/jahilton]
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of HsapDv:0000095 ! 80 year-old and over stage (human)
+relationship: preceded_by HsapDv:0000243 ! ninth decade stage (human)
+property_value: start_ypb "90.0" xsd:float
+
[Term]
id: MdomDv:0000008
name: 4-month-old stage (opossum)
@@ -12535,7 +11392,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "5.0" xsd:float
-property_value: IAO:0000589 "4-month-old stage (opossum)" xsd:string
property_value: start_mpb "4.0" xsd:float
[Term]
@@ -12549,7 +11405,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000008 ! 4-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "6.0" xsd:float
-property_value: IAO:0000589 "5-month-old stage (opossum)" xsd:string
property_value: start_mpb "5.0" xsd:float
[Term]
@@ -12563,7 +11418,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000009 ! 5-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "7.0" xsd:float
-property_value: IAO:0000589 "6-month-old stage (opossum)" xsd:string
property_value: start_mpb "6.0" xsd:float
[Term]
@@ -12577,7 +11431,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000010 ! 6-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "8.0" xsd:float
-property_value: IAO:0000589 "7-month-old stage (opossum)" xsd:string
property_value: start_mpb "7.0" xsd:float
[Term]
@@ -12591,7 +11444,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000011 ! 7-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "9.0" xsd:float
-property_value: IAO:0000589 "8-month-old stage (opossum)" xsd:string
property_value: start_mpb "8.0" xsd:float
[Term]
@@ -12605,7 +11457,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000012 ! 8-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "9-month-old stage (opossum)" xsd:string
property_value: start_mpb "9.0" xsd:float
[Term]
@@ -12619,7 +11470,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000013 ! 9-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "11.0" xsd:float
-property_value: IAO:0000589 "10-month-old stage (opossum)" xsd:string
property_value: start_mpb "10.0" xsd:float
[Term]
@@ -12633,7 +11483,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000014 ! 10-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "12.0" xsd:float
-property_value: IAO:0000589 "11-month-old stage (opossum)" xsd:string
property_value: start_mpb "11.0" xsd:float
[Term]
@@ -12647,7 +11496,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000015 ! 11-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "13.0" xsd:float
-property_value: IAO:0000589 "12-month-old stage (opossum)" xsd:string
property_value: start_mpb "12.0" xsd:float
[Term]
@@ -12661,7 +11509,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000016 ! 12-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "14.0" xsd:float
-property_value: IAO:0000589 "13-month-old stage (opossum)" xsd:string
property_value: start_mpb "13.0" xsd:float
[Term]
@@ -12675,7 +11522,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000017 ! 13-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "15.0" xsd:float
-property_value: IAO:0000589 "14-month-old stage (opossum)" xsd:string
property_value: start_mpb "14.0" xsd:float
[Term]
@@ -12689,7 +11535,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000018 ! 14-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "16.0" xsd:float
-property_value: IAO:0000589 "15-month-old stage (opossum)" xsd:string
property_value: start_mpb "15.0" xsd:float
[Term]
@@ -12703,7 +11548,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000019 ! 15-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "17.0" xsd:float
-property_value: IAO:0000589 "16-month-old stage (opossum)" xsd:string
property_value: start_mpb "16.0" xsd:float
[Term]
@@ -12717,7 +11561,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000020 ! 16-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "18.0" xsd:float
-property_value: IAO:0000589 "17-month-old stage (opossum)" xsd:string
property_value: start_mpb "17.0" xsd:float
[Term]
@@ -12731,7 +11574,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000021 ! 17-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "19.0" xsd:float
-property_value: IAO:0000589 "18-month-old stage (opossum)" xsd:string
property_value: start_mpb "18.0" xsd:float
[Term]
@@ -12745,7 +11587,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000022 ! 18-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "20.0" xsd:float
-property_value: IAO:0000589 "19-month-old stage (opossum)" xsd:string
property_value: start_mpb "19.0" xsd:float
[Term]
@@ -12759,7 +11600,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000023 ! 19-month-old stage (opossum)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_mpb "21.0" xsd:float
-property_value: IAO:0000589 "20-month-old stage (opossum)" xsd:string
property_value: start_mpb "20.0" xsd:float
[Term]
@@ -12772,7 +11612,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_mpb "22.0" xsd:float
-property_value: IAO:0000589 "21-month-old stage (opossum)" xsd:string
property_value: start_mpb "21.0" xsd:float
[Term]
@@ -12786,7 +11625,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000026 ! 21-month-old stage (opossum)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_mpb "23.0" xsd:float
-property_value: IAO:0000589 "22-month-old stage (opossum)" xsd:string
property_value: start_mpb "22.0" xsd:float
[Term]
@@ -12800,7 +11638,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000027 ! 22-month-old stage (opossum)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_mpb "24.0" xsd:float
-property_value: IAO:0000589 "23-month-old stage (opossum)" xsd:string
property_value: start_mpb "23.0" xsd:float
[Term]
@@ -12814,7 +11651,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000028 ! 23-month-old stage (opossum)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_mpb "25.0" xsd:float
-property_value: IAO:0000589 "24-month-old stage (opossum)" xsd:string
property_value: start_mpb "24.0" xsd:float
[Term]
@@ -12828,7 +11664,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000029 ! 24-month-old stage (opossum)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_mpb "26.0" xsd:float
-property_value: IAO:0000589 "25-month-old stage (opossum)" xsd:string
property_value: start_mpb "25.0" xsd:float
[Term]
@@ -12841,7 +11676,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000030 ! 25-month-old stage (opossum)
relationship: part_of UBERON:0007222 ! late adult stage
-property_value: IAO:0000589 "26-month-old and over stage (opossum)" xsd:string
property_value: start_mpb "26.0" xsd:float
[Term]
@@ -12853,7 +11687,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_wpb "3.0" xsd:float
-property_value: IAO:0000589 "2-week-old stage (opossum)" xsd:string
property_value: start_wpb "2.0" xsd:float
[Term]
@@ -12866,7 +11699,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000034 ! 2-week-old stage (opossum)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_wpb "4.0" xsd:float
-property_value: IAO:0000589 "3-week-old stage (opossum)" xsd:string
property_value: start_dpb "21.0" xsd:float
property_value: start_wpb "3.0" xsd:float
@@ -12880,7 +11712,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000035 ! 3-week-old stage (opossum)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_wpb "5.0" xsd:float
-property_value: IAO:0000589 "4-week-old stage (opossum)" xsd:string
property_value: start_wpb "4.0" xsd:float
[Term]
@@ -12893,7 +11724,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000036 ! 4-week-old stage (opossum)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_wpb "6.0" xsd:float
-property_value: IAO:0000589 "5-week-old stage (opossum)" xsd:string
property_value: start_wpb "5.0" xsd:float
[Term]
@@ -12906,7 +11736,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000037 ! 5-week-old stage (opossum)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_wpb "7.5" xsd:float
-property_value: IAO:0000589 "6-week-old and over weaning stage (opossum)" xsd:string
property_value: start_wpb "6.0" xsd:float
[Term]
@@ -12918,7 +11747,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of MdomDv:0000034 ! 2-week-old stage (opossum)
property_value: end_dpb "15.0" xsd:float
-property_value: IAO:0000589 "14-day-old stage (opossum)" xsd:string
property_value: start_dpb "14.0" xsd:float
[Term]
@@ -12931,7 +11759,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000039 ! 14-day-old stage (opossum)
relationship: part_of MdomDv:0000034 ! 2-week-old stage (opossum)
property_value: end_dpb "16.0" xsd:float
-property_value: IAO:0000589 "15-day-old stage (opossum)" xsd:string
property_value: start_dpb "15.0" xsd:float
[Term]
@@ -12944,7 +11771,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000040 ! 15-day-old stage (opossum)
relationship: part_of MdomDv:0000034 ! 2-week-old stage (opossum)
property_value: end_dpb "17.0" xsd:float
-property_value: IAO:0000589 "16-day-old stage (opossum)" xsd:string
property_value: start_dpb "16.0" xsd:float
[Term]
@@ -12957,7 +11783,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000041 ! 16-day-old stage (opossum)
relationship: part_of MdomDv:0000034 ! 2-week-old stage (opossum)
property_value: end_dpb "18.0" xsd:float
-property_value: IAO:0000589 "17-day-old stage (opossum)" xsd:string
property_value: start_dpb "17.0" xsd:float
[Term]
@@ -12970,7 +11795,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000042 ! 17-day-old stage (opossum)
relationship: part_of MdomDv:0000034 ! 2-week-old stage (opossum)
property_value: end_dpb "19.0" xsd:float
-property_value: IAO:0000589 "18-day-old stage (opossum)" xsd:string
property_value: start_dpb "18.0" xsd:float
[Term]
@@ -12983,7 +11807,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000043 ! 18-day-old stage (opossum)
relationship: part_of MdomDv:0000034 ! 2-week-old stage (opossum)
property_value: end_dpb "20.0" xsd:float
-property_value: IAO:0000589 "19-day-old stage (opossum)" xsd:string
property_value: start_dpb "19.0" xsd:float
[Term]
@@ -12996,7 +11819,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MdomDv:0000044 ! 19-day-old stage (opossum)
relationship: part_of MdomDv:0000034 ! 2-week-old stage (opossum)
property_value: end_dpb "21.0" xsd:float
-property_value: IAO:0000589 "20-day-old stage (opossum)" xsd:string
property_value: start_dpb "20.0" xsd:float
[Term]
@@ -13008,7 +11830,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "2.0" xsd:float
-property_value: IAO:0000589 "1-month-old stage (macaque)" xsd:string
property_value: start_mpb "1.0" xsd:float
[Term]
@@ -13021,7 +11842,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000005 ! 1-month-old stage (macaque)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "3.0" xsd:float
-property_value: IAO:0000589 "2-month-old stage (macaque)" xsd:string
property_value: start_mpb "2.0" xsd:float
[Term]
@@ -13034,7 +11854,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000006 ! 2-month-old stage (macaque)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "4.0" xsd:float
-property_value: IAO:0000589 "3-month-old stage (macaque)" xsd:string
property_value: start_mpb "3.0" xsd:float
[Term]
@@ -13047,7 +11866,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000007 ! 3-month-old stage (macaque)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "5.0" xsd:float
-property_value: IAO:0000589 "4-month-old stage (macaque)" xsd:string
property_value: start_mpb "4.0" xsd:float
[Term]
@@ -13060,7 +11878,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000008 ! 4-month-old stage (macaque)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "6.0" xsd:float
-property_value: IAO:0000589 "5-month-old stage (macaque)" xsd:string
property_value: start_mpb "5.0" xsd:float
[Term]
@@ -13073,7 +11890,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000009 ! 5-month-old stage (macaque)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "7.0" xsd:float
-property_value: IAO:0000589 "6-month-old stage (macaque)" xsd:string
property_value: start_mpb "6.0" xsd:float
[Term]
@@ -13086,7 +11902,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000010 ! 6-month-old stage (macaque)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "8.0" xsd:float
-property_value: IAO:0000589 "7-month-old stage (macaque)" xsd:string
property_value: start_mpb "7.0" xsd:float
[Term]
@@ -13099,7 +11914,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000011 ! 7-month-old stage (macaque)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "9.0" xsd:float
-property_value: IAO:0000589 "8-month-old stage (macaque)" xsd:string
property_value: start_mpb "8.0" xsd:float
[Term]
@@ -13113,7 +11927,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000012 ! 8-month-old stage (macaque)
relationship: part_of UBERON:0034920 ! infant stage
property_value: end_mpb "9.7" xsd:float
-property_value: IAO:0000589 "9-month-old nursing stage (macaque)" xsd:string
property_value: start_mpb "9.0" xsd:float
[Term]
@@ -13126,7 +11939,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "9-month-old weaning stage (macaque)" xsd:string
property_value: start_mpb "9.7" xsd:float
[Term]
@@ -13139,7 +11951,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000015 ! 9-month-old weaning stage (macaque)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_mpb "11.0" xsd:float
-property_value: IAO:0000589 "10-month-old stage (macaque)" xsd:string
property_value: start_mpb "10.0" xsd:float
[Term]
@@ -13152,7 +11963,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000016 ! 10-month-old stage (macaque)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "11-month-old stage (macaque)" xsd:string
property_value: start_mpb "9.7" xsd:float
[Term]
@@ -13165,7 +11975,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000017 ! 11-month-old stage (macaque)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "2.0" xsd:float
-property_value: IAO:0000589 "1-year-old stage (macaque)" xsd:string
property_value: start_ypb "1.0" xsd:float
[Term]
@@ -13178,7 +11987,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000018 ! 1-year-old stage (macaque)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "3.0" xsd:float
-property_value: IAO:0000589 "2-year-old stage (macaque)" xsd:string
property_value: start_ypb "2.0" xsd:float
[Term]
@@ -13192,7 +12000,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000019 ! 2-year-old stage (macaque)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "3.5" xsd:float
-property_value: IAO:0000589 "3-year-old immature stage (macaque)" xsd:string
property_value: start_ypb "3.0" xsd:float
[Term]
@@ -13206,7 +12013,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "4.0" xsd:float
-property_value: IAO:0000589 "3-year-old mature stage (macaque)" xsd:string
property_value: start_ypb "3.5" xsd:float
[Term]
@@ -13220,7 +12026,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000023 ! 3-year-old mature stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "5.0" xsd:float
-property_value: IAO:0000589 "4-year-old stage (macaque)" xsd:string
property_value: start_ypb "4.0" xsd:float
[Term]
@@ -13234,7 +12039,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000024 ! 4-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "6.0" xsd:float
-property_value: IAO:0000589 "5-year-old stage (macaque)" xsd:string
property_value: start_ypb "5.0" xsd:float
[Term]
@@ -13248,7 +12052,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000025 ! 5-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "7.0" xsd:float
-property_value: IAO:0000589 "6-year-old stage (macaque)" xsd:string
property_value: start_ypb "6.0" xsd:float
[Term]
@@ -13262,7 +12065,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000026 ! 6-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "8.0" xsd:float
-property_value: IAO:0000589 "7-year-old stage (macaque)" xsd:string
property_value: start_ypb "7.0" xsd:float
[Term]
@@ -13276,7 +12078,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000027 ! 7-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "9.0" xsd:float
-property_value: IAO:0000589 "8-year-old stage (macaque)" xsd:string
property_value: start_ypb "8.0" xsd:float
[Term]
@@ -13290,7 +12091,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000028 ! 8-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "10.0" xsd:float
-property_value: IAO:0000589 "9-year-old stage (macaque)" xsd:string
property_value: start_ypb "9.0" xsd:float
[Term]
@@ -13304,7 +12104,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000029 ! 9-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "11.0" xsd:float
-property_value: IAO:0000589 "10-year-old stage (macaque)" xsd:string
property_value: start_ypb "10.0" xsd:float
[Term]
@@ -13318,7 +12117,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000030 ! 10-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "12.0" xsd:float
-property_value: IAO:0000589 "11-year-old stage (macaque)" xsd:string
property_value: start_ypb "11.0" xsd:float
[Term]
@@ -13332,7 +12130,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000031 ! 11-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "13.0" xsd:float
-property_value: IAO:0000589 "12-year-old stage (macaque)" xsd:string
property_value: start_ypb "12.0" xsd:float
[Term]
@@ -13346,7 +12143,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000032 ! 12-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "14.0" xsd:float
-property_value: IAO:0000589 "13-year-old stage (macaque)" xsd:string
property_value: start_ypb "13.0" xsd:float
[Term]
@@ -13360,7 +12156,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000033 ! 13-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "15.0" xsd:float
-property_value: IAO:0000589 "14-year-old stage (macaque)" xsd:string
property_value: start_ypb "14.0" xsd:float
[Term]
@@ -13374,7 +12169,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000034 ! 14-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "16.0" xsd:float
-property_value: IAO:0000589 "15-year-old stage (macaque)" xsd:string
property_value: start_ypb "15.0" xsd:float
[Term]
@@ -13388,7 +12182,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000035 ! 15-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "17.0" xsd:float
-property_value: IAO:0000589 "16-year-old stage (macaque)" xsd:string
property_value: start_ypb "16.0" xsd:float
[Term]
@@ -13402,7 +12195,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000036 ! 16-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "18.0" xsd:float
-property_value: IAO:0000589 "17-year-old stage (macaque)" xsd:string
property_value: start_ypb "17.0" xsd:float
[Term]
@@ -13416,7 +12208,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000037 ! 17-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "19.0" xsd:float
-property_value: IAO:0000589 "18-year-old stage (macaque)" xsd:string
property_value: start_ypb "18.0" xsd:float
[Term]
@@ -13430,7 +12221,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000038 ! 18-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "20.0" xsd:float
-property_value: IAO:0000589 "19-year-old stage (macaque)" xsd:string
property_value: start_ypb "19.0" xsd:float
[Term]
@@ -13444,7 +12234,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000039 ! 19-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "21.0" xsd:float
-property_value: IAO:0000589 "20-year-old stage (macaque)" xsd:string
property_value: start_ypb "20.0" xsd:float
[Term]
@@ -13458,7 +12247,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000040 ! 20-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "22.0" xsd:float
-property_value: IAO:0000589 "21-year-old stage (macaque)" xsd:string
property_value: start_ypb "21.0" xsd:float
[Term]
@@ -13472,7 +12260,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000041 ! 21-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "23.0" xsd:float
-property_value: IAO:0000589 "22-year-old stage (macaque)" xsd:string
property_value: start_ypb "22.0" xsd:float
[Term]
@@ -13486,7 +12273,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000042 ! 22-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "24.0" xsd:float
-property_value: IAO:0000589 "23-year-old stage (macaque)" xsd:string
property_value: start_ypb "23.0" xsd:float
[Term]
@@ -13500,7 +12286,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000043 ! 23-year-old stage (macaque)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "25.0" xsd:float
-property_value: IAO:0000589 "24-year-old stage (macaque)" xsd:string
property_value: start_ypb "24.0" xsd:float
[Term]
@@ -13514,7 +12299,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "26.0" xsd:float
-property_value: IAO:0000589 "25-year-old stage (macaque)" xsd:string
property_value: start_ypb "25.0" xsd:float
[Term]
@@ -13529,7 +12313,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000047 ! 25-year-old stage (macaque)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "27.0" xsd:float
-property_value: IAO:0000589 "26-year-old stage (macaque)" xsd:string
property_value: start_ypb "26.0" xsd:float
[Term]
@@ -13543,7 +12326,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000048 ! 26-year-old stage (macaque)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "28.0" xsd:float
-property_value: IAO:0000589 "27-year-old stage (macaque)" xsd:string
property_value: start_ypb "27.0" xsd:float
[Term]
@@ -13557,7 +12339,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000049 ! 27-year-old stage (macaque)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "29.0" xsd:float
-property_value: IAO:0000589 "28-year-old stage (macaque)" xsd:string
property_value: start_ypb "28.0" xsd:float
[Term]
@@ -13570,97 +12351,22 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmulDv:0000050 ! 28-year-old stage (macaque)
relationship: part_of UBERON:0007222 ! late adult stage
-property_value: IAO:0000589 "29 year-old and over stage (macaque)" xsd:string
property_value: start_ypb "29.0" xsd:float
-[Term]
-id: MmusDv:0000000
-name: life cycle stage
-namespace: mouse_stages_ontology
-def: "A spatiotemporal region encompassing some part of the life cycle of an organism." [UBERON:0000105]
-subset: life_stage
-synonym: "developmental stage" EXACT []
-synonym: "stage" NARROW []
-xref: UBERON:0000105
-is_a: UBERON:0000105 ! life cycle stage
-intersection_of: UBERON:0000105 ! life cycle stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-property_value: IAO:0000589 "life cycle stage (mouse)" xsd:string
-
-[Term]
-id: MmusDv:0000001
-name: life cycle
-namespace: mouse_developmental_stage
-def: "Temporal interval that defines mouse life from prenatal stage until late adult stage." [Bgee:curator]
-subset: life_stage
-xref: UBERON:0000104
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000104 ! life cycle
-intersection_of: UBERON:0000104 ! life cycle
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-property_value: IAO:0000589 "life cycle (mouse)" xsd:string
-property_value: start_dpc "0.45" xsd:float
-
[Term]
id: MmusDv:0000002
-name: embryonic stage
name: embryonic stage (mouse)
namespace: mouse_developmental_stage
def: "Prenatal stage that starts with fertilization and ends with a fully formed embryo, before undergoing last development during the fetal stage." [Bgee:curator]
comment: By embryo we mean in the sense of up to the 2nd week postfertilization (beginning of Theiler stage 23), we treat fetus as a separate stage.
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000068 ! embryo stage
-intersection_of: UBERON:0000068 ! embryo stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: part_of MmusDv:0000042 ! prenatal stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000068 ! embryo stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "embryo stage (mouse)" xsd:string
-property_value: IAO:0000589 "embryonic stage (mouse)" xsd:string
property_value: start_dpc "0.45" xsd:float
-property_value: start_dpc "0.45" xsd:float
-property_value: start_dpf "0.0" xsd:float
property_value: start_dpf "0.0" xsd:float
-[Term]
-id: MmusDv:0000003
-name: Theiler stage 01
-namespace: mouse_developmental_stage
-def: "Embryonic stage defined by a one-cell embryo (fertilised egg) with zona pellucida present." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_1]
-comment: "Starts the mouse development sequence, range from embryonic age 0-0.9 dpc (day post coitum). Assumes that fertilization takes place around midnight during a 7pm to 5am dark cycle. Noon of the day on which the vaginal plug is found the embryos are aged 0.5 d.p.c (days post coitum)." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Timed_Pregnancy "adapted from"]
-subset: life_stage
-synonym: "E0-2.5" EXACT []
-synonym: "Theiler stage 1" EXACT []
-synonym: "TS01 (E0-2.5)" RELATED [EMAPA:TS01]
-synonym: "zygote stage" RELATED []
-xref: EMAPA:TS01
-xref: UBERON:0000106
-xref: XUO:0000045
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: part_of MmusDv:0000002 ! embryonic stage
-property_value: start_dpc "0.45" xsd:float
-
-[Term]
-id: MmusDv:0000004
-name: cleavage stage
-namespace: mouse_developmental_stage
-def: "Embryonic stage consisting of division of cells in the early embryo." [UBERON:0000107]
-comment: The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula.
-subset: life_stage
-xref: UBERON:0000107
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000107 ! cleavage stage
-intersection_of: UBERON:0000107 ! cleavage stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: immediately_preceded_by MmusDv:0000003 ! Theiler stage 01
-relationship: part_of MmusDv:0000002 ! embryonic stage
-property_value: IAO:0000589 "cleavage stage (mouse)" xsd:string
-
[Term]
id: MmusDv:0000005
-name: Theiler stage 02
name: Theiler stage 02 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic cleavage stage defined by a dividing 2-4 cells egg." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_2]
@@ -13672,18 +12378,13 @@ synonym: "TS02" EXACT []
synonym: "TS02 (E1-2.5)" RELATED [EMAPA:TS02]
xref: EMAPA:TS02
xref: XUO:0000046
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000003 ! Theiler stage 01
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by UBERON:0000106 ! zygote stage
-relationship: part_of MmusDv:0000004 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 02 (mouse)" xsd:string
-property_value: start_dpc "1.0" xsd:float
+relationship: part_of UBERON:0000107 ! cleavage stage
property_value: start_dpc "1.0" xsd:float
[Term]
id: MmusDv:0000006
-name: Theiler stage 03
name: Theiler stage 03 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic cleavage stage defined by a dividing 4-16 cells egg, early to fully compacted morula." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_3]
@@ -13695,33 +12396,13 @@ synonym: "TS03" EXACT []
synonym: "TS03 (E1-3.5)" RELATED [EMAPA:TS03]
xref: EMAPA:TS03
xref: XUO:0000047
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000005 ! Theiler stage 02
-relationship: part_of MmusDv:0000004 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 03 (mouse)" xsd:string
-property_value: start_dpc "2.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000005 ! Theiler stage 02 (mouse)
+relationship: part_of UBERON:0000107 ! cleavage stage
property_value: start_dpc "2.0" xsd:float
-[Term]
-id: MmusDv:0000007
-name: blastula stage
-namespace: mouse_developmental_stage
-def: "Embryonic stage that is an early stage of embryonic development in animals and is produced by cleavage of a fertilized ovum, with formation of a central fluid-filled cavity called the blastocoel." [UBERON:0000108]
-comment: The blastula follows the morula and precedes the gastrula in the developmental sequence.
-subset: life_stage
-xref: UBERON:0000108
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000108 ! blastula stage
-intersection_of: UBERON:0000108 ! blastula stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: part_of MmusDv:0000002 ! embryonic stage
-relationship: preceded_by MmusDv:0000004 ! cleavage stage
-property_value: IAO:0000589 "blastula stage (mouse)" xsd:string
-
[Term]
id: MmusDv:0000008
-name: Theiler stage 04
name: Theiler stage 04 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic blastula stage defined by a dividing 16-40 cells egg, with early evidence of the blastocoelic cavity." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_4]
@@ -13733,17 +12414,13 @@ synonym: "TS04" EXACT []
synonym: "TS04 (E2-4)" RELATED [EMAPA:TS04]
xref: EMAPA:TS04
xref: XUO:0000048
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000006 ! Theiler stage 03
-relationship: part_of MmusDv:0000007 ! blastula stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 04 (mouse)" xsd:string
-property_value: start_dpc "3.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000006 ! Theiler stage 03 (mouse)
+relationship: part_of UBERON:0000108 ! blastula stage
property_value: start_dpc "3.0" xsd:float
[Term]
id: MmusDv:0000009
-name: Theiler stage 05
name: Theiler stage 05 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic blastula stage defined by a zona free blastocyst (zona pellucida absent)." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_5]
@@ -13755,19 +12432,14 @@ synonym: "TS05" EXACT []
synonym: "TS05 (E3-5.5)" RELATED [EMAPA:TS05]
xref: EMAPA:TS05
xref: XUO:0000049
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000008 ! Theiler stage 04
-relationship: part_of MmusDv:0000007 ! blastula stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker GO:0001835
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000008 ! Theiler stage 04 (mouse)
+relationship: part_of UBERON:0000108 ! blastula stage
property_value: has_stage_marker GO:0001835
-property_value: IAO:0000589 "Theiler stage 05 (mouse)" xsd:string
-property_value: start_dpc "4.0" xsd:float
property_value: start_dpc "4.0" xsd:float
[Term]
id: MmusDv:0000010
-name: Theiler stage 06
name: Theiler stage 06 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic blastula stage during which the blastocyst attaches, with first evidence of embryonic endoderm cells covering the blastocoelic surface of the inner cell mass." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_6]
@@ -13779,17 +12451,13 @@ synonym: "TS06" EXACT []
synonym: "TS06 (E4-5.5)" RELATED [EMAPA:TS06]
xref: EMAPA:TS06
xref: XUO:0000050
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000009 ! Theiler stage 05 (mouse)
-relationship: part_of MmusDv:0000007 ! blastula stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 06 (mouse)" xsd:string
-property_value: start_dpc "4.5" xsd:float
+relationship: part_of UBERON:0000108 ! blastula stage
property_value: start_dpc "4.5" xsd:float
[Term]
id: MmusDv:0000011
-name: Theiler stage 07
name: Theiler stage 07 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic blastula stage defined by implantation and formation of the egg cylinder resulting from the rapid increase in the number of inner cell mass cells." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_7]
@@ -13801,19 +12469,14 @@ synonym: "TS07" EXACT []
synonym: "TS07 (E4.5-6)" RELATED [EMAPA:TS07]
xref: EMAPA:TS07
xref: XUO:0000051
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000010 ! Theiler stage 06 (mouse)
-relationship: part_of MmusDv:0000007 ! blastula stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker GO:0007566
+relationship: part_of UBERON:0000108 ! blastula stage
property_value: has_stage_marker GO:0007566
-property_value: IAO:0000589 "Theiler stage 07 (mouse)" xsd:string
-property_value: start_dpc "5.0" xsd:float
property_value: start_dpc "5.0" xsd:float
[Term]
id: MmusDv:0000012
-name: Theiler stage 08
name: Theiler stage 08 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic blastula stage during which the egg cylinder differentiates into embryonic and extra-embryonic regions, and the pro-amniotic cavity appears." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_8]
@@ -13825,32 +12488,13 @@ synonym: "TS08" EXACT []
synonym: "TS08 (E5-6.5)" RELATED [EMAPA:TS08]
xref: EMAPA:TS08
xref: XUO:0000052
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000011 ! Theiler stage 07 (mouse)
-relationship: part_of MmusDv:0000007 ! blastula stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 08 (mouse)" xsd:string
-property_value: start_dpc "6.0" xsd:float
+relationship: part_of UBERON:0000108 ! blastula stage
property_value: start_dpc "6.0" xsd:float
-[Term]
-id: MmusDv:0000013
-name: gastrula stage
-namespace: mouse_developmental_stage
-def: "Embryonic stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage." [UBERON:0000109]
-subset: life_stage
-xref: UBERON:0000109
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000109 ! gastrula stage
-intersection_of: UBERON:0000109 ! gastrula stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: immediately_preceded_by MmusDv:0000007 ! blastula stage
-relationship: part_of MmusDv:0000002 ! embryonic stage
-property_value: IAO:0000589 "gastrula stage (mouse)" xsd:string
-
[Term]
id: MmusDv:0000014
-name: Theiler stage 09
name: Theiler stage 09 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic gastrula stage during which gastrulation starts with first evidence of mesoderm and visible embryonic axis." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_9]
@@ -13862,19 +12506,14 @@ synonym: "TS09" EXACT []
synonym: "TS09 (E6.25-7.25)" RELATED [EMAPA:TS09]
xref: EMAPA:TS09
xref: XUO:0000053
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000012 ! Theiler stage 08 (mouse)
-relationship: part_of MmusDv:0000013 ! gastrula stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker UBERON:0000926
+relationship: part_of UBERON:0000109 ! gastrula stage
property_value: has_stage_marker UBERON:0000926
-property_value: IAO:0000589 "Theiler stage 09 (mouse)" xsd:string
-property_value: start_dpc "6.5" xsd:float
property_value: start_dpc "6.5" xsd:float
[Term]
id: MmusDv:0000015
-name: Theiler stage 10
name: Theiler stage 10 (mouse)
namespace: mouse_developmental_stage
def: "Embryonic gastrula stage during which the primitive streak bulges into the pro-amniotic cavity and forms the amniotic fold; the exocoelom appears; the allantoic bud first appears, gastrulation continues and the node becomes visible." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_10]
@@ -13885,62 +12524,16 @@ synonym: "TS10" EXACT []
synonym: "TS10 (E6.5-7.75)" RELATED [EMAPA:TS10]
xref: EMAPA:TS10
xref: XUO:0000054
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000014 ! Theiler stage 09 (mouse)
-relationship: part_of MmusDv:0000013 ! gastrula stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker UBERON:0003888
+relationship: part_of UBERON:0000109 ! gastrula stage
property_value: has_stage_marker UBERON:0003888
property_value: has_stage_marker UBERON:0004340
-property_value: has_stage_marker UBERON:0004340
property_value: has_stage_marker UBERON:0005971
-property_value: has_stage_marker UBERON:0005971
-property_value: IAO:0000589 "Theiler stage 10 (mouse)" xsd:string
-property_value: start_dpc "7.0" xsd:float
property_value: start_dpc "7.0" xsd:float
-[Term]
-id: MmusDv:0000017
-name: Theiler stage 11
-namespace: mouse_developmental_stage
-def: "Embryonic stage called presomite stage and defined by the formation of the neural plate." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_11]
-comment: This stage starts the emergence of the central nervous system at embryonic age 7.5 dpc (day post coitum).
-subset: life_stage
-synonym: "E7.25-8" EXACT []
-synonym: "neurula stage" RELATED []
-synonym: "TS11" EXACT []
-synonym: "TS11 (E7.25-8)" RELATED [EMAPA:TS11]
-xref: EMAPA:TS11
-xref: UBERON:0000110
-xref: XUO:0000055
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000110 ! neurula stage
-intersection_of: UBERON:0000110 ! neurula stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: immediately_preceded_by MmusDv:0000015 ! Theiler stage 10 (mouse)
-relationship: part_of MmusDv:0000002 ! embryonic stage
-property_value: has_stage_marker UBERON:0003075
-property_value: IAO:0000589 "neurula stage (mouse)" xsd:string
-property_value: start_dpc "7.5" xsd:float
-
-[Term]
-id: MmusDv:0000018
-name: organogenesis stage
-namespace: mouse_developmental_stage
-def: "Embryonic stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism." [UBERON:0000111]
-subset: life_stage
-xref: UBERON:0000111
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000111 ! organogenesis stage
-intersection_of: UBERON:0000111 ! organogenesis stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: immediately_preceded_by MmusDv:0000095 ! Theiler stage 11d (mouse)
-relationship: part_of MmusDv:0000002 ! embryonic stage
-property_value: IAO:0000589 "organogenesis stage (mouse)" xsd:string
-
[Term]
id: MmusDv:0000019
-name: Theiler stage 12
name: Theiler stage 12 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which first somites become visible." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_12]
@@ -13951,19 +12544,14 @@ synonym: "TS12" EXACT []
synonym: "TS12 (E7.5-8.75)" RELATED [EMAPA:TS12]
xref: EMAPA:TS12
xref: XUO:0000056
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000017 ! Theiler stage 11
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker EMAPA:16173
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by UBERON:0000110 ! neurula stage
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: has_stage_marker EMAPA:16173
-property_value: IAO:0000589 "Theiler stage 12 (mouse)" xsd:string
-property_value: start_dpc "8.0" xsd:float
property_value: start_dpc "8.0" xsd:float
[Term]
id: MmusDv:0000020
-name: Theiler stage 13
name: Theiler stage 13 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage defined by the turning of the embryo; initiated in embryos with 6-8 pairs of somites and usually completed in embryos with 14-16 pairs of somites." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_13]
@@ -13974,23 +12562,16 @@ synonym: "TS13" EXACT []
synonym: "TS13 (E8-9.25)" RELATED [EMAPA:TS13]
xref: EMAPA:TS13
xref: XUO:0000057
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000019 ! Theiler stage 12 (mouse)
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker EMAPA:16441
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: has_stage_marker EMAPA:16441
property_value: has_stage_marker EMAPA:16445
-property_value: has_stage_marker EMAPA:16445
-property_value: has_stage_marker EMAPA:16449
property_value: has_stage_marker EMAPA:16449
-property_value: IAO:0000589 "Theiler stage 13 (mouse)" xsd:string
-property_value: start_dpc "8.5" xsd:float
property_value: start_dpc "8.5" xsd:float
[Term]
id: MmusDv:0000021
-name: Theiler stage 14
name: Theiler stage 14 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which the rostral extremity of the neural tube closes in embryos with usually about 15-18 somite pairs. Late in the stage the 3rd branchial arch becomes visible." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_14]
@@ -14001,25 +12582,17 @@ synonym: "TS14" EXACT []
synonym: "TS14 (E8.5-9.75)" RELATED [EMAPA:TS14]
xref: EMAPA:TS14
xref: XUO:0000058
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000020 ! Theiler stage 13
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker EMAPA:16445
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000020 ! Theiler stage 13 (mouse)
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: has_stage_marker EMAPA:16445
property_value: has_stage_marker EMAPA:16449
-property_value: has_stage_marker EMAPA:16449
-property_value: has_stage_marker EMAPA:16453
property_value: has_stage_marker EMAPA:16453
property_value: has_stage_marker EMAPA:16457
-property_value: has_stage_marker EMAPA:16457
-property_value: IAO:0000589 "Theiler stage 14 (mouse)" xsd:string
-property_value: start_dpc "9.0" xsd:float
property_value: start_dpc "9.0" xsd:float
[Term]
id: MmusDv:0000022
-name: Theiler stage 15
name: Theiler stage 15 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which the posterior neuropore forms and the condensation of the forelimb bud becomes apparent near the 8th-12th somite pairs." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_15]
@@ -14030,19 +12603,14 @@ synonym: "TS15" EXACT []
synonym: "TS15 (E9-10.25)" RELATED [EMAPA:TS15]
xref: EMAPA:TS15
xref: XUO:0000059
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000021 ! Theiler stage 14
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker UBERON:0005417
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000021 ! Theiler stage 14 (mouse)
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: has_stage_marker UBERON:0005417
-property_value: IAO:0000589 "Theiler stage 15 (mouse)" xsd:string
-property_value: start_dpc "9.5" xsd:float
property_value: start_dpc "9.5" xsd:float
[Term]
id: MmusDv:0000023
-name: Theiler stage 16
name: Theiler stage 16 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which the posterior neuropore closes and the hind limb bud becomes visible at the level of the 23rd-28th somites." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_16]
@@ -14053,19 +12621,14 @@ synonym: "TS16" EXACT []
synonym: "TS16 (E9.5-10.75)" RELATED [EMAPA:TS16]
xref: EMAPA:TS16
xref: XUO:0000060
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000022 ! Theiler stage 15
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker UBERON:0005418
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000022 ! Theiler stage 15 (mouse)
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: has_stage_marker UBERON:0005418
-property_value: IAO:0000589 "Theiler stage 16 (mouse)" xsd:string
-property_value: start_dpc "10.0" xsd:float
property_value: start_dpc "10.0" xsd:float
[Term]
id: MmusDv:0000024
-name: Theiler stage 17
name: Theiler stage 17 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage defined by the deepening of the lens pit and the first appearance of the physiological umbilical hernia." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_17]
@@ -14076,21 +12639,15 @@ synonym: "TS17" EXACT []
synonym: "TS17 (E10-11.25)" RELATED [EMAPA:TS17]
xref: EMAPA:TS17
xref: XUO:0000061
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000023 ! Theiler stage 16
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker EMAPA:18411
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000023 ! Theiler stage 16 (mouse)
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: has_stage_marker EMAPA:18411
property_value: has_stage_marker UBERON:0006259
-property_value: has_stage_marker UBERON:0006259
-property_value: IAO:0000589 "Theiler stage 17 (mouse)" xsd:string
-property_value: start_dpc "10.5" xsd:float
property_value: start_dpc "10.5" xsd:float
[Term]
id: MmusDv:0000025
-name: Theiler stage 18
name: Theiler stage 18 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which the lens vesicle gradually closes and the nasal pits start to form. The rapid growth of the brain is striking." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_18]
@@ -14101,19 +12658,14 @@ synonym: "TS18" EXACT []
synonym: "TS18 (E10.5-11.25)" RELATED [EMAPA:TS18]
xref: EMAPA:TS18
xref: XUO:0000062
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000024 ! Theiler stage 17
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker UBERON:0005870
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000024 ! Theiler stage 17 (mouse)
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: has_stage_marker UBERON:0005870
-property_value: IAO:0000589 "Theiler stage 18 (mouse)" xsd:string
-property_value: start_dpc "11.0" xsd:float
property_value: start_dpc "11.0" xsd:float
[Term]
id: MmusDv:0000026
-name: Theiler stage 19
name: Theiler stage 19 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which the lens vesicle becomes completely closed and detached from the ectoderm, and peripheral margins of the eye become well defined." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_19]
@@ -14124,17 +12676,13 @@ synonym: "TS19" EXACT []
synonym: "TS19 (E11-12.25)" RELATED [EMAPA:TS19]
xref: EMAPA:TS19
xref: XUO:0000063
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000025 ! Theiler stage 18
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 19 (mouse)" xsd:string
-property_value: start_dpc "11.5" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000025 ! Theiler stage 18 (mouse)
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: start_dpc "11.5" xsd:float
[Term]
id: MmusDv:0000027
-name: Theiler stage 20
name: Theiler stage 20 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which the handplate develops angles corresponding to the future digits, and tongue and brain vesicles are clearly visible." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_20]
@@ -14145,17 +12693,13 @@ synonym: "TS20" EXACT []
synonym: "TS20 (E11.5-13)" RELATED [EMAPA:TS20]
xref: EMAPA:TS20
xref: XUO:0000064
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000026 ! Theiler stage 19
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 20 (mouse)" xsd:string
-property_value: start_dpc "12.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000026 ! Theiler stage 19 (mouse)
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: start_dpc "12.0" xsd:float
[Term]
id: MmusDv:0000028
-name: Theiler stage 21
name: Theiler stage 21 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which the digit widths and locations can be discerned, and the pinna rapidly develops and forms a crest at right angles to the head." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_21]
@@ -14166,17 +12710,13 @@ synonym: "TS21" EXACT []
synonym: "TS21 (E12.5-14)" RELATED [EMAPA:TS21]
xref: EMAPA:TS21
xref: XUO:0000065
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000027 ! Theiler stage 20 (mouse)
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 21 (mouse)" xsd:string
-property_value: start_dpc "13.0" xsd:float
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: start_dpc "13.0" xsd:float
[Term]
id: MmusDv:0000029
-name: Theiler stage 22
name: Theiler stage 22 (mouse)
namespace: mouse_developmental_stage
def: "Organogenesis stage during which the fingers are clearly visible and the long bones of the limbs are present." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_22]
@@ -14187,35 +12727,14 @@ synonym: "TS22" EXACT []
synonym: "TS22 (E13.5-15)" RELATED [EMAPA:TS22]
xref: EMAPA:TS22
xref: XUO:0000066
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000028 ! Theiler stage 21
-relationship: part_of MmusDv:0000018 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: has_stage_marker UBERON:0003606
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000028 ! Theiler stage 21 (mouse)
+relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: has_stage_marker UBERON:0003606
-property_value: IAO:0000589 "Theiler stage 22 (mouse)" xsd:string
-property_value: start_dpc "14.0" xsd:float
property_value: start_dpc "14.0" xsd:float
-[Term]
-id: MmusDv:0000031
-name: fetal stage
-namespace: mouse_developmental_stage
-def: "Prenatal stage that starts with the fully formed embryo and ends at birth." [Bgee:curator]
-comment: This stage describes the four Theiler stages that are commonly reported as equivalent to the human fetal period in the literature. They are anyway defined by embryonic days.
-subset: life_stage
-xref: UBERON:0007220
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0007220 ! late embryonic stage
-intersection_of: UBERON:0007220 ! late embryonic stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: immediately_preceded_by MmusDv:0000002 ! embryonic stage
-relationship: part_of MmusDv:0000042 ! prenatal stage
-property_value: IAO:0000589 "late embryonic stage (mouse)" xsd:string
-
[Term]
id: MmusDv:0000032
-name: Theiler stage 23
name: Theiler stage 23 (mouse)
namespace: mouse_developmental_stage
def: "Fetal stage during which the toes separate and hair follicles are present in the cephalic region but not at the periphery of the vibrissae." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_23]
@@ -14226,17 +12745,13 @@ synonym: "TS23" EXACT []
synonym: "TS23 (E15)" RELATED [EMAPA:TS23]
xref: EMAPA:TS23
xref: XUO:0000067
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000029 ! Theiler stage 22
-relationship: part_of MmusDv:0000031 ! fetal stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 23 (mouse)" xsd:string
-property_value: start_dpc "15.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000029 ! Theiler stage 22 (mouse)
+relationship: part_of UBERON:0007220 ! late embryonic stage
property_value: start_dpc "15.0" xsd:float
[Term]
id: MmusDv:0000033
-name: Theiler stage 24
name: Theiler stage 24 (mouse)
namespace: mouse_developmental_stage
def: "Fetal stage during which the umbilical hernia disappears and there is a corresponding increase in the size of the peritoneal sac." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_24]
@@ -14247,17 +12762,13 @@ synonym: "TS24" EXACT []
synonym: "TS24 (E16)" RELATED [EMAPA:TS24]
xref: EMAPA:TS24
xref: XUO:0000068
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000032 ! Theiler stage 23 (mouse)
-relationship: part_of MmusDv:0000031 ! fetal stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 24 (mouse)" xsd:string
-property_value: start_dpc "16.0" xsd:float
+relationship: part_of UBERON:0007220 ! late embryonic stage
property_value: start_dpc "16.0" xsd:float
[Term]
id: MmusDv:0000034
-name: Theiler stage 25
name: Theiler stage 25 (mouse)
namespace: mouse_developmental_stage
def: "Fetal stage during which the thickened skin forms wrinkles and the subcutaneous veins are less visible." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_25]
@@ -14268,17 +12779,13 @@ synonym: "TS25" EXACT []
synonym: "TS25 (E17)" RELATED [EMAPA:TS25]
xref: EMAPA:TS25
xref: XUO:0000069
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000033 ! Theiler stage 24 (mouse)
-relationship: part_of MmusDv:0000031 ! fetal stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 25 (mouse)" xsd:string
-property_value: start_dpc "17.0" xsd:float
+relationship: part_of UBERON:0007220 ! late embryonic stage
property_value: start_dpc "17.0" xsd:float
[Term]
id: MmusDv:0000035
-name: Theiler stage 26
name: Theiler stage 26 (mouse)
namespace: mouse_developmental_stage
def: "Fetal stage defined by long whiskers and during which the eyes are barely visible through the closed eyelids." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_26]
@@ -14289,1915 +12796,1217 @@ synonym: "TS26" EXACT []
synonym: "TS26 (E18)" RELATED [EMAPA:TS26]
xref: EMAPA:TS26
xref: XUO:0000070
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000034 ! Theiler stage 25 (mouse)
-relationship: part_of MmusDv:0000031 ! fetal stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_wpb "0.0" xsd:float
+relationship: part_of UBERON:0007220 ! late embryonic stage
property_value: end_wpb "0.0" xsd:float
-property_value: IAO:0000589 "Theiler stage 26 (mouse)" xsd:string
property_value: start_dpc "18.0" xsd:float
-property_value: start_dpc "18.0" xsd:float
-
-[Term]
-id: MmusDv:0000036
-name: Theiler stage 27
-namespace: mouse_developmental_stage
-def: "Stage that refers to the newborn mouse, aged E19-20, P0. Description of anatomical structures related to this stage corresponds to the first days of the mouse life. Used for postnatal days 0 through 3." [https://github.com/tfhayamizu]
-comment: TS27 is used for annotation of postnatal days 0 through 3 (P0 to P3). This is a somewhat arbitrary cut-off but seems to best fit the data we have encountered. TS28 is then used from postnatal day 4 onward. [https://github.com/tfhayamizu]
-subset: life_stage
-synonym: "newborn stage" EXACT [UBERON:cjm]
-synonym: "P0" RELATED [UBERON:cjm]
-synonym: "TS27" RELATED [EMAPA:TS27]
-xref: EMAPA:TS27
-xref: UBERON:0007221
-xref: XUO:0000071
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000035 ! Theiler stage 26 (mouse)
-relationship: part_of MmusDv:0000138 ! nursing stage
-property_value: end_dpb "4.0" xsd:float
-property_value: end_wpb "0.6" xsd:float
-property_value: start_dpb "0.0" xsd:float
-property_value: start_dpc "19.0" xsd:float
-property_value: start_wpb "0.0" xsd:float
-
-[Term]
-id: MmusDv:0000042
-name: prenatal stage
-namespace: mouse_developmental_stage
-def: "Mouse life cycle that starts with fertilization and ends with birth." [UBERON:0000068]
-subset: life_stage
-xref: UBERON:0000068
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: part_of MmusDv:0000001 ! life cycle
-property_value: end_dpc "19.0" xsd:float
-property_value: end_ypb "0.0" xsd:float
-property_value: start_dpc "0.45" xsd:float
-property_value: start_dpf "0.0" xsd:float
-
-[Term]
-id: MmusDv:0000043
-name: immature stage
-namespace: mouse_developmental_stage
-def: "Mouse developmental stage that covers the period from birth until 5 weeks old." [Bgee:curator]
-comment: It is commonly accepted that mouse reaches sexual maturity by six weeks of age (see http://www.ahc.umn.edu/rar/breeding.html).
-subset: life_stage
-xref: EMAPA:TS28
-xref: UBERON:0000112
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000112 ! sexually immature stage
-intersection_of: UBERON:0000112 ! sexually immature stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: part_of MmusDv:0000092 ! postnatal stage
-property_value: end_wpb "6.0" xsd:float
-property_value: IAO:0000589 "sexually immature stage (mouse)" xsd:string
-property_value: start_wpb "0.0" xsd:float
[Term]
id: MmusDv:0000062
-name: 2-month-old stage
name: 2-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Early adult stage that refers to a mouse which is over 2 and under 3 months old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000152 ! 7-week-old stage
-relationship: part_of MmusDv:0000153 ! young adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "3.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000152 ! 7-week-old stage (mouse)
+relationship: part_of MmusDv:0000153 ! young adult stage (mouse)
property_value: end_mpb "3.0" xsd:float
property_value: end_wpb "12.0" xsd:float
-property_value: end_wpb "12.0" xsd:float
-property_value: IAO:0000589 "2-month-old stage (mouse)" xsd:string
-property_value: start_mpb "2.0" xsd:float
property_value: start_mpb "2.0" xsd:float
property_value: start_wpb "8.0" xsd:float
-property_value: start_wpb "8.0" xsd:float
[Term]
id: MmusDv:0000063
-name: 3-month-old stage
name: 3-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Early adult stage that refers to a mouse which is over 3 and under 4 months old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000062 ! 2-month-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000062 ! 2-month-old stage (mouse)
relationship: part_of MmusDv:0000137 ! 3-6 month-old mature stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_mpb "4.0" xsd:float
-property_value: end_mpb "4.0" xsd:float
-property_value: end_wpb "16.0" xsd:float
property_value: end_wpb "16.0" xsd:float
-property_value: IAO:0000589 "3-month-old stage (mouse)" xsd:string
property_value: start_mpb "3.0" xsd:float
-property_value: start_mpb "3.0" xsd:float
-property_value: start_wpb "12.0" xsd:float
property_value: start_wpb "12.0" xsd:float
[Term]
id: MmusDv:0000064
-name: 4-month-old stage
name: 4-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Early adult stage that refers to a mouse which is over 4 and under 5 months old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000063 ! 3-month-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000063 ! 3-month-old stage (mouse)
relationship: part_of MmusDv:0000137 ! 3-6 month-old mature stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "5.0" xsd:float
property_value: end_mpb "5.0" xsd:float
property_value: end_wpb "21.0" xsd:float
-property_value: end_wpb "21.0" xsd:float
-property_value: IAO:0000589 "4-month-old stage (mouse)" xsd:string
-property_value: start_mpb "4.0" xsd:float
property_value: start_mpb "4.0" xsd:float
property_value: start_wpb "16.0" xsd:float
-property_value: start_wpb "16.0" xsd:float
[Term]
id: MmusDv:0000069
-name: 5-month-old stage
name: 5-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 5 and under 6 months old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000064 ! 4-month-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000064 ! 4-month-old stage (mouse)
relationship: part_of MmusDv:0000137 ! 3-6 month-old mature stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_mpb "6.0" xsd:float
-property_value: end_mpb "6.0" xsd:float
-property_value: end_wpb "25.0" xsd:float
property_value: end_wpb "25.0" xsd:float
-property_value: IAO:0000589 "5-month-old stage (mouse)" xsd:string
property_value: start_mpb "5.0" xsd:float
-property_value: start_mpb "5.0" xsd:float
-property_value: start_wpb "21.0" xsd:float
property_value: start_wpb "21.0" xsd:float
[Term]
id: MmusDv:0000077
-name: 6-month-old stage
name: 6-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 6 and under 7 months old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000069 ! 5-month-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000069 ! 5-month-old stage (mouse)
relationship: part_of MmusDv:0000137 ! 3-6 month-old mature stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "7.0" xsd:float
property_value: end_mpb "7.0" xsd:float
property_value: end_wpb "30.0" xsd:float
-property_value: end_wpb "30.0" xsd:float
-property_value: IAO:0000589 "6-month-old stage (mouse)" xsd:string
-property_value: start_mpb "6.0" xsd:float
property_value: start_mpb "6.0" xsd:float
property_value: start_wpb "25.0" xsd:float
-property_value: start_wpb "25.0" xsd:float
[Term]
id: MmusDv:0000078
-name: 7-month-old stage
name: 7-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 7 and under 8 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000077 ! 6-month-old stage (mouse)
-relationship: part_of MmusDv:0000153 ! young adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
+relationship: part_of MmusDv:0000153 ! young adult stage (mouse)
property_value: end_mpb "8.0" xsd:float
-property_value: end_mpb "8.0" xsd:float
-property_value: IAO:0000589 "7-month-old stage (mouse)" xsd:string
-property_value: start_mpb "7.0" xsd:float
property_value: start_mpb "7.0" xsd:float
property_value: start_wpb "30.0" xsd:float
-property_value: start_wpb "30.0" xsd:float
[Term]
id: MmusDv:0000079
-name: 8-month-old stage
name: 8-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 8 and under 9 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000078 ! 7-month-old stage (mouse)
-relationship: part_of MmusDv:0000153 ! young adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
+relationship: part_of MmusDv:0000153 ! young adult stage (mouse)
property_value: end_mpb "9.0" xsd:float
-property_value: end_mpb "9.0" xsd:float
-property_value: IAO:0000589 "8-month-old stage (mouse)" xsd:string
-property_value: start_mpb "8.0" xsd:float
property_value: start_mpb "8.0" xsd:float
[Term]
id: MmusDv:0000080
-name: 9-month-old stage
name: 9-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 9 and under 10 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000079 ! 8-month-old stage (mouse)
-relationship: part_of MmusDv:0000153 ! young adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "10.0" xsd:float
+relationship: part_of MmusDv:0000153 ! young adult stage (mouse)
property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "9-month-old stage (mouse)" xsd:string
-property_value: start_mpb "9.0" xsd:float
property_value: start_mpb "9.0" xsd:float
[Term]
id: MmusDv:0000081
-name: 10-month-old stage
name: 10-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 10 and under 11 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000080 ! 9-month-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000080 ! 9-month-old stage (mouse)
relationship: part_of MmusDv:0000135 ! middle aged stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_mpb "11.0" xsd:float
-property_value: end_mpb "11.0" xsd:float
-property_value: IAO:0000589 "10-month-old stage (mouse)" xsd:string
-property_value: start_mpb "10.0" xsd:float
property_value: start_mpb "10.0" xsd:float
[Term]
id: MmusDv:0000082
-name: 11-month-old stage
name: 11-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 11 and under 12 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000081 ! 10-month-old stage (mouse)
relationship: part_of MmusDv:0000135 ! middle aged stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "12.0" xsd:float
property_value: end_mpb "12.0" xsd:float
-property_value: IAO:0000589 "11-month-old stage (mouse)" xsd:string
-property_value: start_mpb "11.0" xsd:float
property_value: start_mpb "11.0" xsd:float
[Term]
id: MmusDv:0000083
-name: 12-month-old stage
name: 12-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 12 and under 13 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000082 ! 11-month-old stage (mouse)
relationship: part_of MmusDv:0000135 ! middle aged stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_mpb "13.0" xsd:float
-property_value: end_mpb "13.0" xsd:float
-property_value: IAO:0000589 "12-month-old stage (mouse)" xsd:string
-property_value: start_mpb "12.0" xsd:float
property_value: start_mpb "12.0" xsd:float
[Term]
id: MmusDv:0000084
-name: 13-month-old stage
name: 13-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 13 and under 14 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000083 ! 12-month-old stage (mouse)
relationship: part_of MmusDv:0000135 ! middle aged stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "14.0" xsd:float
property_value: end_mpb "14.0" xsd:float
-property_value: IAO:0000589 "13-month-old stage (mouse)" xsd:string
-property_value: start_mpb "13.0" xsd:float
property_value: start_mpb "13.0" xsd:float
[Term]
id: MmusDv:0000085
-name: 14-month-old stage
name: 14-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 14 and under 15 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000084 ! 13-month-old stage (mouse)
relationship: part_of MmusDv:0000135 ! middle aged stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_mpb "15.0" xsd:float
-property_value: end_mpb "15.0" xsd:float
-property_value: IAO:0000589 "14-month-old stage (mouse)" xsd:string
-property_value: start_mpb "14.0" xsd:float
property_value: start_mpb "14.0" xsd:float
[Term]
id: MmusDv:0000086
-name: 15-month-old stage
name: 15-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 15 and under 16 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000085 ! 14-month-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000085 ! 14-month-old stage (mouse)
relationship: part_of MmusDv:0000135 ! middle aged stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "16.0" xsd:float
property_value: end_mpb "16.0" xsd:float
-property_value: IAO:0000589 "15-month-old stage (mouse)" xsd:string
-property_value: start_mpb "15.0" xsd:float
property_value: start_mpb "15.0" xsd:float
[Term]
id: MmusDv:0000087
-name: 16-month-old stage
name: 16-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 16 and under 17 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000086 ! 15-month-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000086 ! 15-month-old stage (mouse)
relationship: part_of MmusDv:0000135 ! middle aged stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_mpb "17.0" xsd:float
-property_value: end_mpb "17.0" xsd:float
-property_value: IAO:0000589 "16-month-old stage (mouse)" xsd:string
-property_value: start_mpb "16.0" xsd:float
property_value: start_mpb "16.0" xsd:float
[Term]
id: MmusDv:0000088
-name: 17-month-old stage
name: 17-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 17 and under 18 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000087 ! 16-month-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000087 ! 16-month-old stage (mouse)
relationship: part_of MmusDv:0000135 ! middle aged stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "18.0" xsd:float
property_value: end_mpb "18.0" xsd:float
-property_value: IAO:0000589 "17-month-old stage (mouse)" xsd:string
-property_value: start_mpb "17.0" xsd:float
property_value: start_mpb "17.0" xsd:float
[Term]
id: MmusDv:0000089
-name: 18-month-old stage
name: 18-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 18 and under 19 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000088 ! 17-month-old stage
-relationship: part_of MmusDv:0000134 ! late adult stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000088 ! 17-month-old stage (mouse)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_mpb "19.0" xsd:float
-property_value: end_mpb "19.0" xsd:float
-property_value: IAO:0000589 "18-month-old stage (mouse)" xsd:string
-property_value: start_mpb "18.0" xsd:float
property_value: start_mpb "18.0" xsd:float
[Term]
id: MmusDv:0000090
-name: 19-month-old stage
name: 19-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 19 and under 20 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000089 ! 18-month-old stage (mouse)
-relationship: part_of MmusDv:0000134 ! late adult stage
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "20.0" xsd:float
property_value: end_mpb "20.0" xsd:float
-property_value: IAO:0000589 "19-month-old stage (mouse)" xsd:string
-property_value: start_mpb "19.0" xsd:float
property_value: start_mpb "19.0" xsd:float
[Term]
id: MmusDv:0000091
-name: 20-month-old stage and over
name: 20-month-old stage and over (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 20 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000090 ! 19-month-old stage
-relationship: part_of MmusDv:0000134 ! late adult stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000090 ! 19-month-old stage (mouse)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "20-month-old stage and over (mouse)" xsd:string
property_value: start_mpb "20.0" xsd:float
-property_value: start_mpb "20.0" xsd:float
-
-[Term]
-id: MmusDv:0000092
-name: postnatal stage
-namespace: mouse_developmental_stage
-def: "Mouse developmental stage that covers the period from birth until late adulthood." [Bgee:curator]
-subset: life_stage
-xref: UBERON:0000066
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000042 ! prenatal stage
-relationship: part_of MmusDv:0000001 ! life cycle
-property_value: start_dpc "19.0" xsd:float
-property_value: start_wpb "0.0" xsd:float
[Term]
id: MmusDv:0000093
-name: Theiler stage 11b
name: Theiler stage 11b (mouse)
namespace: mouse_developmental_stage
def: "Embryonic neurula stage during which the neural plate formation occurs and the allantoic bud elongates ." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_11]
subset: life_stage
synonym: "TS11b" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000111 ! Theiler stage 11a (mouse)
-relationship: part_of MmusDv:0000017 ! Theiler stage 11
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 11b (mouse)" xsd:string
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
id: MmusDv:0000094
-name: Theiler stage 11c
name: Theiler stage 11c (mouse)
namespace: mouse_developmental_stage
def: "Embryonic neurula stage during which the neural plate formation occurs and the head folds are formed while the neural groove becomes visible." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_11]
subset: life_stage
synonym: "TS11c" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000093 ! Theiler stage 11b (mouse)
-relationship: part_of MmusDv:0000017 ! Theiler stage 11
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 11c (mouse)" xsd:string
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
id: MmusDv:0000095
-name: Theiler stage 11d
name: Theiler stage 11d (mouse)
namespace: mouse_developmental_stage
def: "Embryonic neurula stage during which the neural plate formation occurs and the head folds continue to enlarge while the foregut pocket begins to form." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_11]
subset: life_stage
synonym: "TS11d" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000094 ! Theiler stage 11c (mouse)
-relationship: part_of MmusDv:0000017 ! Theiler stage 11
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 11d (mouse)" xsd:string
-
-[Term]
-id: MmusDv:0000096
-name: early immature stage
-namespace: mouse_developmental_stage
-def: "Immature stage that covers the period from birth until end of the first week." [Bgee:curator]
-comment: This term was made obsolete due to discussion at https://github.com/obophenotype/developmental-stage-ontologies/issues/23. [ANiknejad]
-subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0007221 ! neonate stage
-intersection_of: UBERON:0007221 ! neonate stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_wpb "1.0" xsd:float
-property_value: end_wpb "1.0" xsd:float
-property_value: IAO:0000589 "early immature stage (mouse)" xsd:string
-property_value: IAO:0000589 "neonate stage (mouse)" xsd:string
-property_value: start_dpc "19.0" xsd:float
-property_value: start_dpc "19.0" xsd:float
-property_value: start_wpb "0.0" xsd:float
-property_value: start_wpb "0.0" xsd:float
-is_obsolete: true
-consider: MmusDv:0000036
-consider: MmusDv:0000139
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
id: MmusDv:0000103
-name: Theiler stage 09a
name: Theiler stage 09a (mouse)
namespace: mouse_developmental_stage
def: "Theiler developmental stage 9 defined by advanced endometrial reaction and during which the egg-cylinder stage advances with the first evidence of an embryonic axis." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Stage_9a]
subset: life_stage
synonym: "Theiler stage 9" EXACT []
synonym: "TS09a" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: part_of MmusDv:0000014 ! Theiler stage 09 (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 09a (mouse)" xsd:string
[Term]
id: MmusDv:0000104
-name: Theiler stage 09b
name: Theiler stage 09b (mouse)
namespace: mouse_developmental_stage
def: "Theiler developmental stage 9 defined by advanced endometrial reaction and during which the first mesodermal cells are produced by gastrulation late in this stage." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Stage_9b]
subset: life_stage
synonym: "Theiler stage 9" EXACT []
synonym: "TS09b" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000103 ! Theiler stage 09a (mouse)
relationship: part_of MmusDv:0000014 ! Theiler stage 09 (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 09b (mouse)" xsd:string
[Term]
id: MmusDv:0000105
-name: Theiler stage 10a
name: Theiler stage 10a (mouse)
namespace: mouse_developmental_stage
def: "Theiler developmental stage 10 during which the tissue at the posterior end of the primitive streak bulges into the pro-amniotic cavity and forms the amniotic fold." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Stage_10a]
comment: Refers to MS (mid-streak) stage in Downs and Davies staging of gastrulating mouse embryos (PMID: 8269852, 1993).
subset: life_stage
synonym: "TS10a" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: part_of MmusDv:0000015 ! Theiler stage 10 (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 10a (mouse)" xsd:string
[Term]
id: MmusDv:0000106
-name: Theiler stage 10b
name: Theiler stage 10b (mouse)
namespace: mouse_developmental_stage
def: "Theiler developmental stage 10 during which small cavities coalesce to form a single cavity in the mesoderm of the posterior amniotic fold, the exocoelom." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_10b]
comment: Refers to MS-LS (mid-streak to late streak) stage in Downs and Davies staging of gastrulating mouse embryos, 1993 (see http://www.ncbi.nlm.nih.gov/pubmed/8269852).
subset: life_stage
synonym: "TS10b" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000105 ! Theiler stage 10a
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000105 ! Theiler stage 10a (mouse)
relationship: part_of MmusDv:0000015 ! Theiler stage 10 (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 10b (mouse)" xsd:string
[Term]
id: MmusDv:0000107
-name: Theiler stage 10c
name: Theiler stage 10c (mouse)
namespace: mouse_developmental_stage
def: "Theiler developmental stage 10 during which the allantoic bud first appears, gastrulation continues and the node becomes visible." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_10c]
comment: Refers to MS-LS (mid-streak to late streak) stage in Downs and Davies staging of gastrulating mouse embryos, 1993 (see http://www.ncbi.nlm.nih.gov/pubmed/8269852).
subset: life_stage
synonym: "TS10c" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000106 ! Theiler stage 10b
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000106 ! Theiler stage 10b (mouse)
relationship: part_of MmusDv:0000015 ! Theiler stage 10 (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 10c (mouse)" xsd:string
[Term]
id: MmusDv:0000108
-name: Theiler stage 12a
name: Theiler stage 12a (mouse)
namespace: mouse_developmental_stage
def: "Theiler developmental stage 12 defined by unturned embryo with first appearance of somite pairs 1-4 and during which the allantois extends further into the exocoelom. Maxillary components of the 1st branchial arch become prominent. The preotic sulcus is visible in the 2-3 somite embryo. The cardiogenic plate begins to form and the foregut pocket is clearly visible." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_12a]
comment: Embryonic age 8 dpc (day post coitum). Refers to human CarnegieStage09.
subset: life_stage
synonym: "TS12a" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: part_of MmusDv:0000019 ! Theiler stage 12 (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 12a (mouse)" xsd:string
[Term]
id: MmusDv:0000109
-name: Theiler stage 12b
name: Theiler stage 12b (mouse)
namespace: mouse_developmental_stage
def: "Theiler developmental stage 12 defined by unturned embryo with first appearance of somite pairs 5-7 and during which neural closure occurs in the region of the 4th and 5th somites, extending in both directions from this site. Headfolds are particularly prominent. Optic placodes are first evident and become indented to form the optic pits. The heart rudiment develops rapidly. The allantois contacts the chorion at the end of this stage." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_12b]
comment: Embryonic age 8 dpc (day post coitum). Refers to human CarnegieStage09.
subset: life_stage
synonym: "TS12b" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000108 ! Theiler stage 12a (mouse)
relationship: part_of MmusDv:0000019 ! Theiler stage 12 (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 12b (mouse)" xsd:string
-
-[Term]
-id: MmusDv:0000110
-name: mature stage
-namespace: mouse_developmental_stage
-def: "Mouse developmental stage that refers to a sexually mature adult mouse which is over 6 weeks old." [Bgee:curator]
-subset: life_stage
-synonym: "mature" EXACT []
-xref: UBERON:0000113
-is_a: MmusDv:0000000 ! life cycle stage
-is_a: UBERON:0000113 ! post-juvenile adult stage
-intersection_of: UBERON:0000113 ! post-juvenile adult stage
-intersection_of: BFO:0000066 NCBITaxon:10090 ! occurs in Mus musculus
-relationship: immediately_preceded_by MmusDv:0000043 ! immature stage
-relationship: part_of MmusDv:0000092 ! postnatal stage
-property_value: IAO:0000589 "post-juvenile adult stage (mouse)" xsd:string
-property_value: start_mpb "1.5" xsd:float
-property_value: start_wpb "6.0" xsd:float
[Term]
id: MmusDv:0000111
-name: Theiler stage 11a
name: Theiler stage 11a (mouse)
namespace: mouse_developmental_stage
def: "Embryonic neurula stage during which the neural plate formation occurs and the amniotic cavity is sealed off into three distinct cavities - the amniotic cavity, the exocoelom and the ectoplacental cleft." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Theiler_Stage_11]
subset: life_stage
synonym: "TS11a" EXACT []
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: part_of MmusDv:0000017 ! Theiler stage 11
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: IAO:0000589 "Theiler stage 11a (mouse)" xsd:string
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
id: MmusDv:0000114
-name: 4-day-old stage
name: 4-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 4 and under 5 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000036 ! Theiler stage 27
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by UBERON:0007221 ! neonate stage
relationship: part_of MmusDv:0000139 ! 4-6 days (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "5.0" xsd:float
-property_value: end_dpb "5.0" xsd:float
-property_value: IAO:0000589 "4-day-old stage (mouse)" xsd:string
-property_value: start_dpb "4.0" xsd:float
property_value: start_dpb "4.0" xsd:float
[Term]
id: MmusDv:0000115
-name: 5-day-old stage
name: 5-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 5 and under 6 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000114 ! 4-day-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000114 ! 4-day-old stage (mouse)
relationship: part_of MmusDv:0000139 ! 4-6 days (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "6.0" xsd:float
property_value: end_dpb "6.0" xsd:float
-property_value: IAO:0000589 "5-day-old stage (mouse)" xsd:string
-property_value: start_dpb "5.0" xsd:float
property_value: start_dpb "5.0" xsd:float
[Term]
id: MmusDv:0000116
-name: 6-day-old stage
name: 6-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 6 and under 7 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000115 ! 5-day-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000115 ! 5-day-old stage (mouse)
relationship: part_of MmusDv:0000139 ! 4-6 days (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "7.0" xsd:float
-property_value: end_dpb "7.0" xsd:float
-property_value: IAO:0000589 "6-day-old stage (mouse)" xsd:string
-property_value: start_dpb "6.0" xsd:float
property_value: start_dpb "6.0" xsd:float
[Term]
id: MmusDv:0000117
-name: 7-day-old stage
name: 7-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 7 and under 8 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000116 ! 6-day-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000116 ! 6-day-old stage (mouse)
relationship: part_of MmusDv:0000140 ! 1-week-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "8.0" xsd:float
property_value: end_dpb "8.0" xsd:float
-property_value: IAO:0000589 "7-day-old stage (mouse)" xsd:string
-property_value: start_dpb "7.0" xsd:float
property_value: start_dpb "7.0" xsd:float
[Term]
id: MmusDv:0000118
-name: 8-day-old stage
name: 8-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 8 and under 9 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000117 ! 7-day-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000117 ! 7-day-old stage (mouse)
relationship: part_of MmusDv:0000140 ! 1-week-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "9.0" xsd:float
-property_value: end_dpb "9.0" xsd:float
-property_value: IAO:0000589 "8-day-old stage (mouse)" xsd:string
-property_value: start_dpb "8.0" xsd:float
property_value: start_dpb "8.0" xsd:float
[Term]
id: MmusDv:0000119
-name: 9-day-old stage
name: 9-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 9 and under 10 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000118 ! 8-day-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000118 ! 8-day-old stage (mouse)
relationship: part_of MmusDv:0000140 ! 1-week-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "10.0" xsd:float
property_value: end_dpb "10.0" xsd:float
-property_value: IAO:0000589 "9-day-old stage (mouse)" xsd:string
-property_value: start_dpb "9.0" xsd:float
property_value: start_dpb "9.0" xsd:float
[Term]
id: MmusDv:0000120
-name: 10-day-old stage
name: 10-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 10 and under 11 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000119 ! 9-day-old stage (mouse)
relationship: part_of MmusDv:0000140 ! 1-week-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "11.0" xsd:float
-property_value: end_dpb "11.0" xsd:float
-property_value: IAO:0000589 "10-day-old stage (mouse)" xsd:string
-property_value: start_dpb "10.0" xsd:float
property_value: start_dpb "10.0" xsd:float
[Term]
id: MmusDv:0000121
-name: 11-day-old stage
name: 11-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 11 and under 12 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000120 ! 10-day-old stage (mouse)
relationship: part_of MmusDv:0000140 ! 1-week-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "12.0" xsd:float
property_value: end_dpb "12.0" xsd:float
-property_value: IAO:0000589 "11-day-old stage (mouse)" xsd:string
-property_value: start_dpb "11.0" xsd:float
property_value: start_dpb "11.0" xsd:float
[Term]
id: MmusDv:0000122
-name: 12-day-old stage
name: 12-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 12 and under 13 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000121 ! 11-day-old stage (mouse)
relationship: part_of MmusDv:0000140 ! 1-week-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "13.0" xsd:float
-property_value: end_dpb "13.0" xsd:float
-property_value: IAO:0000589 "12-day-old stage (mouse)" xsd:string
-property_value: start_dpb "12.0" xsd:float
property_value: start_dpb "12.0" xsd:float
[Term]
id: MmusDv:0000123
-name: 13-day-old stage
name: 13-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 13 and under 14 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000122 ! 12-day-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000122 ! 12-day-old stage (mouse)
relationship: part_of MmusDv:0000140 ! 1-week-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "14.0" xsd:float
property_value: end_dpb "14.0" xsd:float
-property_value: IAO:0000589 "13-day-old stage (mouse)" xsd:string
-property_value: start_dpb "13.0" xsd:float
property_value: start_dpb "13.0" xsd:float
[Term]
id: MmusDv:0000124
-name: 20-month-old stage
name: 20-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 20 and under 21 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000090 ! 19-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "21.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000090 ! 19-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "21.0" xsd:float
-property_value: IAO:0000589 "20-month-old stage (mouse)" xsd:string
-property_value: start_mpb "20.0" xsd:float
property_value: start_mpb "20.0" xsd:float
[Term]
id: MmusDv:0000125
-name: 21-month-old stage
name: 21-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 21 and under 22 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000124 ! 20-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "22.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000124 ! 20-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "22.0" xsd:float
-property_value: IAO:0000589 "21-month-old stage (mouse)" xsd:string
-property_value: start_mpb "21.0" xsd:float
property_value: start_mpb "21.0" xsd:float
[Term]
id: MmusDv:0000126
-name: 22-month-old stage
name: 22-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 22 and under 23 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000125 ! 21-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "23.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000125 ! 21-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "23.0" xsd:float
-property_value: IAO:0000589 "22-month-old stage (mouse)" xsd:string
-property_value: start_mpb "22.0" xsd:float
property_value: start_mpb "22.0" xsd:float
[Term]
id: MmusDv:0000127
-name: 23-month-old stage
name: 23-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 23 and under 24 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000126 ! 22-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "24.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000126 ! 22-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "24.0" xsd:float
-property_value: IAO:0000589 "23-month-old stage (mouse)" xsd:string
-property_value: start_mpb "23.0" xsd:float
property_value: start_mpb "23.0" xsd:float
[Term]
id: MmusDv:0000128
-name: 24-month-old stage
name: 24-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 24 and under 25 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000127 ! 23-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "25.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000127 ! 23-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "25.0" xsd:float
-property_value: IAO:0000589 "24-month-old stage (mouse)" xsd:string
-property_value: start_mpb "24.0" xsd:float
property_value: start_mpb "24.0" xsd:float
[Term]
id: MmusDv:0000129
-name: 25-month-old stage
name: 25-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 25 and under 26 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000128 ! 24-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "26.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000128 ! 24-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "26.0" xsd:float
-property_value: IAO:0000589 "25-month-old stage (mouse)" xsd:string
-property_value: start_mpb "25.0" xsd:float
property_value: start_mpb "25.0" xsd:float
[Term]
id: MmusDv:0000130
-name: 26-month-old stage
name: 26-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 26 and under 27 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000129 ! 25-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "27.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000129 ! 25-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "27.0" xsd:float
-property_value: IAO:0000589 "26-month-old stage (mouse)" xsd:string
-property_value: start_mpb "26.0" xsd:float
property_value: start_mpb "26.0" xsd:float
[Term]
id: MmusDv:0000131
-name: 27-month-old stage
name: 27-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 27 and under 28 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000130 ! 26-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "28.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000130 ! 26-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "28.0" xsd:float
-property_value: IAO:0000589 "27-month-old stage (mouse)" xsd:string
-property_value: start_mpb "27.0" xsd:float
property_value: start_mpb "27.0" xsd:float
[Term]
id: MmusDv:0000132
-name: 28-month-old stage
name: 28-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 28 and under 29 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000131 ! 27-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "29.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000131 ! 27-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "29.0" xsd:float
-property_value: IAO:0000589 "28-month-old stage (mouse)" xsd:string
-property_value: start_mpb "28.0" xsd:float
property_value: start_mpb "28.0" xsd:float
[Term]
id: MmusDv:0000133
-name: 29-month-old stage
name: 29-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 29 and under 30 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000132 ! 28-month-old stage
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "30.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000132 ! 28-month-old stage (mouse)
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "30.0" xsd:float
-property_value: IAO:0000589 "29-month-old stage (mouse)" xsd:string
property_value: start_mpb "29.0" xsd:float
-property_value: start_mpb "29.0" xsd:float
-
-[Term]
-id: MmusDv:0000134
-name: late adult stage
-namespace: mouse_developmental_stage
-def: "Mature stage that refers to an adult mouse which is over 18 months old." [Bgee:curator]
-comment: Mice from 18 months are considered as old and show presence of senescent changes in almost all biomarkers (see https://www.jax.org/news-and-insights/jax-blog/2017/november/when-are-mice-considered-old).
-subset: life_stage
-xref: UBERON:0007222
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000088 ! 17-month-old stage
-relationship: immediately_preceded_by MmusDv:0000136 ! prime adult stage
-relationship: part_of MmusDv:0000110 ! mature stage
-property_value: start_mpb "18.0" xsd:float
[Term]
id: MmusDv:0000135
-name: middle aged stage
name: middle aged stage (mouse)
namespace: mouse_developmental_stage
def: "Prime adult stage that refers to a mouse which is over 10 and under 18 months old." [Bgee:curator]
comment: Mice middle-aged group is used in the literature to investigate progressive age-related changes. For sake of consistency in age continuity, we adapt the age limits from https://www.jax.org/news-and-insights/jax-blog/2017/november/when-are-mice-considered-old.
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000080 ! 9-month-old stage
-relationship: immediately_preceded_by MmusDv:0000153 ! young adult stage
-relationship: part_of MmusDv:0000136 ! prime adult stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000080 ! 9-month-old stage (mouse)
+relationship: immediately_preceded_by MmusDv:0000153 ! young adult stage (mouse)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "18.0" xsd:float
property_value: end_mpb "18.0" xsd:float
-property_value: IAO:0000589 "middle aged stage (mouse)" xsd:string
property_value: start_mpb "10.0" xsd:float
-property_value: start_mpb "10.0" xsd:float
-
-[Term]
-id: MmusDv:0000136
-name: prime adult stage
-namespace: mouse_developmental_stage
-def: "Mature stage that refers to a adult mouse which is over 6 weeks and under 18 months old." [Bgee:curator]
-comment: Mice over 18 months old are considered as old (see https://www.jax.org/news-and-insights/jax-blog/2017/november/when-are-mice-considered-old).
-subset: life_stage
-xref: UBERON:0018241
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000150 ! 5-week-old stage
-relationship: part_of MmusDv:0000110 ! mature stage
-property_value: end_mpb "18.0" xsd:float
-property_value: start_mpb "1.5" xsd:float
-property_value: start_wpb "6.0" xsd:float
[Term]
id: MmusDv:0000137
-name: 3-6 month-old mature stage
name: 3-6 month-old mature stage (mouse)
namespace: mouse_developmental_stage
def: "Mature stage that refers to a mouse which is over 3 and under 7 months old." [Bgee:curator]
comment: This stage is often used as the reference group for any age change in aging studies. Correlates to humans from 20 - 30 years old (see https://www.jax.org/news-and-insights/jax-blog/2017/november/when-are-mice-considered-old).
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000062 ! 2-month-old stage
-relationship: part_of MmusDv:0000153 ! young adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "7.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000062 ! 2-month-old stage (mouse)
+relationship: part_of MmusDv:0000153 ! young adult stage (mouse)
property_value: end_mpb "7.0" xsd:float
-property_value: IAO:0000589 "3-6 month-old mature stage (mouse)" xsd:string
-property_value: start_mpb "3.0" xsd:float
property_value: start_mpb "3.0" xsd:float
-[Term]
-id: MmusDv:0000138
-name: nursing stage
-namespace: mouse_developmental_stage
-def: "Mouse developmental stage that covers the period from birth until 22 days old, at which point individuals wean." [Bgee:curator]
-comment: Age of weaning is 22 days (see https://genomics.senescence.info/species/entry.php?species=Mus_musculus).
-subset: life_stage
-xref: UBERON:0018685
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: part_of MmusDv:0000043 ! immature stage
-property_value: end_dpb "23.0" xsd:float
-property_value: start_dpb "0.0" xsd:float
-
[Term]
id: MmusDv:0000139
-name: 4-6 days
name: 4-6 days (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to the newborn mouse which is over 4 days and under 7 days old." [Bgee:curator]
comment: This stage starts at P4.
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: part_of MmusDv:0000177 ! infant stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "7.0" xsd:float
-property_value: end_dpb "7.0" xsd:float
-property_value: end_wpb "1.0" xsd:float
property_value: end_wpb "1.0" xsd:float
-property_value: IAO:0000589 "4-6 days (mouse)" xsd:string
property_value: start_dpb "4.0" xsd:float
-property_value: start_dpb "4.0" xsd:float
-property_value: start_wpb "0.6" xsd:float
property_value: start_wpb "0.6" xsd:float
[Term]
id: MmusDv:0000140
-name: 1-week-old stage
name: 1-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 7 days and under 14 days old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000139 ! 4-6 days (mouse)
-relationship: part_of MmusDv:0000177 ! infant stage
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "14.0" xsd:float
property_value: end_dpb "14.0" xsd:float
property_value: end_wpb "2.0" xsd:float
-property_value: end_wpb "2.0" xsd:float
-property_value: IAO:0000589 "1-week-old stage (mouse)" xsd:string
-property_value: start_dpb "7.0" xsd:float
property_value: start_dpb "7.0" xsd:float
property_value: start_wpb "1.0" xsd:float
-property_value: start_wpb "1.0" xsd:float
[Term]
id: MmusDv:0000141
-name: 2-week-old stage
name: 2-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 14 days and under 21 days old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000140 ! 1-week-old stage (mouse)
-relationship: part_of MmusDv:0000177 ! infant stage
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "21.0" xsd:float
-property_value: end_dpb "21.0" xsd:float
-property_value: end_wpb "3.0" xsd:float
property_value: end_wpb "3.0" xsd:float
-property_value: IAO:0000589 "2-week-old stage (mouse)" xsd:string
property_value: start_dpb "14.0" xsd:float
-property_value: start_dpb "14.0" xsd:float
-property_value: start_wpb "2.0" xsd:float
property_value: start_wpb "2.0" xsd:float
[Term]
id: MmusDv:0000142
-name: 21-day-old stage
name: 21-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 21 and under 22 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000141 ! 2-week-old stage (mouse)
-relationship: part_of MmusDv:0000177 ! infant stage
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "22.0" xsd:float
property_value: end_dpb "22.0" xsd:float
-property_value: IAO:0000589 "21-day-old stage (mouse)" xsd:string
-property_value: start_dpb "21.0" xsd:float
property_value: start_dpb "21.0" xsd:float
[Term]
id: MmusDv:0000143
-name: 22-day-old stage
name: 22-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 22 and under 23 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000142 ! 21-day-old stage (mouse)
-relationship: part_of MmusDv:0000177 ! infant stage
relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "23.0" xsd:float
-property_value: end_dpb "23.0" xsd:float
-property_value: IAO:0000589 "22-day-old stage (mouse)" xsd:string
-property_value: start_dpb "22.0" xsd:float
property_value: start_dpb "22.0" xsd:float
[Term]
id: MmusDv:0000144
-name: 23-day-old stage
name: 23-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 23 and under 24 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000143 ! 22-day-old stage
-relationship: part_of MmusDv:0000178 ! juvenile stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000143 ! 22-day-old stage (mouse)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "24.0" xsd:float
property_value: end_dpb "24.0" xsd:float
-property_value: IAO:0000589 "23-day-old stage (mouse)" xsd:string
-property_value: start_dpb "23.0" xsd:float
property_value: start_dpb "23.0" xsd:float
[Term]
id: MmusDv:0000145
-name: 24-day-old stage
name: 24-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 24 and under 25 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000144 ! 23-day-old stage (mouse)
-relationship: part_of MmusDv:0000178 ! juvenile stage
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "25.0" xsd:float
-property_value: end_dpb "25.0" xsd:float
-property_value: IAO:0000589 "24-day-old stage (mouse)" xsd:string
-property_value: start_dpb "24.0" xsd:float
property_value: start_dpb "24.0" xsd:float
[Term]
id: MmusDv:0000146
-name: 25-day-old stage
name: 25-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 25 and under 26 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000145 ! 24-day-old stage (mouse)
-relationship: part_of MmusDv:0000178 ! juvenile stage
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "22.0" xsd:float
property_value: end_dpb "22.0" xsd:float
-property_value: IAO:0000589 "25-day-old stage (mouse)" xsd:string
-property_value: start_dpb "21.0" xsd:float
property_value: start_dpb "21.0" xsd:float
[Term]
id: MmusDv:0000147
-name: 26-day-old stage
name: 26-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 26 and under 27 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000146 ! 25-day-old stage (mouse)
-relationship: part_of MmusDv:0000178 ! juvenile stage
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "27.0" xsd:float
-property_value: end_dpb "27.0" xsd:float
-property_value: IAO:0000589 "26-day-old stage (mouse)" xsd:string
-property_value: start_dpb "26.0" xsd:float
property_value: start_dpb "26.0" xsd:float
[Term]
id: MmusDv:0000148
-name: 27-day-old stage
name: 27-day-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 27 and under 28 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000147 ! 26-day-old stage (mouse)
-relationship: part_of MmusDv:0000178 ! juvenile stage
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "28.0" xsd:float
property_value: end_dpb "28.0" xsd:float
-property_value: IAO:0000589 "27-day-old stage (mouse)" xsd:string
-property_value: start_dpb "27.0" xsd:float
property_value: start_dpb "27.0" xsd:float
[Term]
id: MmusDv:0000149
-name: 4-week-old stage
name: 4-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 28 days and under 35 days old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000148 ! 27-day-old stage
-relationship: part_of MmusDv:0000178 ! juvenile stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000148 ! 27-day-old stage (mouse)
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "35.0" xsd:float
-property_value: end_dpb "35.0" xsd:float
-property_value: end_wpb "5.0" xsd:float
property_value: end_wpb "5.0" xsd:float
-property_value: IAO:0000589 "4-week-old stage (mouse)" xsd:string
property_value: start_dpb "28.0" xsd:float
-property_value: start_dpb "28.0" xsd:float
-property_value: start_wpb "4.0" xsd:float
property_value: start_wpb "4.0" xsd:float
[Term]
id: MmusDv:0000150
-name: 5-week-old stage
name: 5-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Immature stage that refers to a mouse which is over 35 days and under 42 days old." [Bgee:curator]
comment: This stage is usually the stage during which the sexual maturity occurs.
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000149 ! 4-week-old stage (mouse)
-relationship: part_of MmusDv:0000178 ! juvenile stage
relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "42.0" xsd:float
property_value: end_dpb "42.0" xsd:float
property_value: end_wpb "6.0" xsd:float
-property_value: end_wpb "6.0" xsd:float
-property_value: IAO:0000589 "5-week-old stage (mouse)" xsd:string
-property_value: start_dpb "35.0" xsd:float
property_value: start_dpb "35.0" xsd:float
property_value: start_wpb "5.0" xsd:float
-property_value: start_wpb "5.0" xsd:float
[Term]
id: MmusDv:0000151
-name: 6-week-old stage
name: 6-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Prime adult stage that refers to a mouse which is over 42 days and under 49 days old." [Bgee:curator]
comment: This stage is commonly considered in the literature as the milestone that distinguishes between sexually immmature and mature stages (see http://www.ahc.umn.edu/rar/breeding.html).
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000150 ! 5-week-old stage
-relationship: part_of MmusDv:0000153 ! young adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "49.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000150 ! 5-week-old stage (mouse)
+relationship: part_of MmusDv:0000153 ! young adult stage (mouse)
property_value: end_dpb "49.0" xsd:float
property_value: end_wpb "7.0" xsd:float
-property_value: end_wpb "7.0" xsd:float
-property_value: IAO:0000589 "6-week-old stage (mouse)" xsd:string
property_value: start_dpb "42.0" xsd:float
-property_value: start_dpb "42.0" xsd:float
-property_value: start_wpb "6.0" xsd:float
property_value: start_wpb "6.0" xsd:float
[Term]
id: MmusDv:0000152
-name: 7-week-old stage
name: 7-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Prime adult stage that refers to a mouse which is over 49 days and under 56 days old." [Bgee:curator]
comment: This stage is commonly considered in the literature as the milestone that distinguishes between sexually immmature and mature stages (see http://www.ahc.umn.edu/rar/breeding.html).
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000151 ! 6-week-old stage
-relationship: part_of MmusDv:0000153 ! young adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "56.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000151 ! 6-week-old stage (mouse)
+relationship: part_of MmusDv:0000153 ! young adult stage (mouse)
property_value: end_dpb "56.0" xsd:float
property_value: end_wpb "8.0" xsd:float
-property_value: end_wpb "8.0" xsd:float
-property_value: IAO:0000589 "7-week-old stage (mouse)" xsd:string
-property_value: start_dpb "49.0" xsd:float
property_value: start_dpb "49.0" xsd:float
property_value: start_wpb "7.0" xsd:float
-property_value: start_wpb "7.0" xsd:float
[Term]
id: MmusDv:0000153
-name: young adult stage
name: young adult stage (mouse)
namespace: mouse_developmental_stage
def: "Prime adult stage that refers to a sexually mature mouse under 10 months old." [Bgee:curator]
comment: This stage is adapted from https://www.jax.org/news-and-insights/jax-blog/2017/november/when-are-mice-considered-old.
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000150 ! 5-week-old stage
-relationship: part_of MmusDv:0000136 ! prime adult stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000150 ! 5-week-old stage (mouse)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_mpb "10.0" xsd:float
-property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "young adult stage (mouse)" xsd:string
-property_value: start_mpb "1.5" xsd:float
property_value: start_mpb "1.5" xsd:float
[Term]
id: MmusDv:0000154
-name: 8-week-old stage
name: 8-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 56 days and under 63 days old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: part_of MmusDv:0000062 ! 2-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "63.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of MmusDv:0000062 ! 2-month-old stage (mouse)
property_value: end_dpb "63.0" xsd:float
property_value: end_wpb "9.0" xsd:float
-property_value: end_wpb "9.0" xsd:float
-property_value: IAO:0000589 "8-week-old stage (mouse)" xsd:string
-property_value: start_dpb "56.0" xsd:float
property_value: start_dpb "56.0" xsd:float
property_value: start_wpb "8.0" xsd:float
-property_value: start_wpb "8.0" xsd:float
[Term]
id: MmusDv:0000155
-name: 9-week-old stage
name: 9-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 63 days and under 70 days old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000154 ! 8-week-old stage
-relationship: part_of MmusDv:0000062 ! 2-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "70.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000154 ! 8-week-old stage (mouse)
+relationship: part_of MmusDv:0000062 ! 2-month-old stage (mouse)
property_value: end_dpb "70.0" xsd:float
property_value: end_wpb "10.0" xsd:float
-property_value: end_wpb "10.0" xsd:float
-property_value: IAO:0000589 "9-week-old stage (mouse)" xsd:string
property_value: start_dpb "63.0" xsd:float
-property_value: start_dpb "63.0" xsd:float
-property_value: start_wpb "9.0" xsd:float
property_value: start_wpb "9.0" xsd:float
[Term]
id: MmusDv:0000156
-name: 10-week-old stage
name: 10-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 70 days and under 77 days old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000155 ! 9-week-old stage
-relationship: part_of MmusDv:0000062 ! 2-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "77.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000155 ! 9-week-old stage (mouse)
+relationship: part_of MmusDv:0000062 ! 2-month-old stage (mouse)
property_value: end_dpb "77.0" xsd:float
property_value: end_wpb "11.0" xsd:float
-property_value: end_wpb "11.0" xsd:float
-property_value: IAO:0000589 "10-week-old stage (mouse)" xsd:string
-property_value: start_dpb "70.0" xsd:float
property_value: start_dpb "70.0" xsd:float
property_value: start_wpb "10.0" xsd:float
-property_value: start_wpb "10.0" xsd:float
[Term]
id: MmusDv:0000157
-name: 11-week-old stage
name: 11-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 77 days and under 84 days old." [Bgee:curator]
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000156 ! 10-week-old stage (mouse)
-relationship: part_of MmusDv:0000062 ! 2-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
+relationship: part_of MmusDv:0000062 ! 2-month-old stage (mouse)
property_value: end_dpb "84.0" xsd:float
-property_value: end_dpb "84.0" xsd:float
-property_value: end_wpb "12.0" xsd:float
property_value: end_wpb "12.0" xsd:float
-property_value: IAO:0000589 "11-week-old stage (mouse)" xsd:string
property_value: start_dpb "77.0" xsd:float
-property_value: start_dpb "77.0" xsd:float
-property_value: start_wpb "11.0" xsd:float
property_value: start_wpb "11.0" xsd:float
[Term]
id: MmusDv:0000158
-name: 12-week-old stage
name: 12-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 84 days and under 91 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000157 ! 11-week-old stage (mouse)
-relationship: part_of MmusDv:0000063 ! 3-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "91.0" xsd:float
+relationship: part_of MmusDv:0000063 ! 3-month-old stage (mouse)
property_value: end_dpb "91.0" xsd:float
property_value: end_wpb "13.0" xsd:float
-property_value: end_wpb "13.0" xsd:float
-property_value: IAO:0000589 "12-week-old stage (mouse)" xsd:string
-property_value: start_dpb "84.0" xsd:float
property_value: start_dpb "84.0" xsd:float
property_value: start_wpb "12.0" xsd:float
-property_value: start_wpb "12.0" xsd:float
[Term]
id: MmusDv:0000159
-name: 13-week-old stage
name: 13-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 91 days and under 98 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000158 ! 12-week-old stage (mouse)
-relationship: part_of MmusDv:0000063 ! 3-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
+relationship: part_of MmusDv:0000063 ! 3-month-old stage (mouse)
property_value: end_dpb "98.0" xsd:float
-property_value: end_dpb "98.0" xsd:float
-property_value: end_wpb "14.0" xsd:float
property_value: end_wpb "14.0" xsd:float
-property_value: IAO:0000589 "13-week-old stage (mouse)" xsd:string
property_value: start_dpb "91.0" xsd:float
-property_value: start_dpb "91.0" xsd:float
-property_value: start_wpb "13.0" xsd:float
property_value: start_wpb "13.0" xsd:float
[Term]
id: MmusDv:0000160
-name: 14-week-old stage
name: 14-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 98 days and under 105 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000159 ! 13-week-old stage (mouse)
-relationship: part_of MmusDv:0000063 ! 3-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "105.0" xsd:float
+relationship: part_of MmusDv:0000063 ! 3-month-old stage (mouse)
property_value: end_dpb "105.0" xsd:float
property_value: end_wpb "15.0" xsd:float
-property_value: end_wpb "15.0" xsd:float
-property_value: IAO:0000589 "14-week-old stage (mouse)" xsd:string
-property_value: start_dpb "98.0" xsd:float
property_value: start_dpb "98.0" xsd:float
property_value: start_wpb "14.0" xsd:float
-property_value: start_wpb "14.0" xsd:float
[Term]
id: MmusDv:0000161
-name: 15-week-old stage
name: 15-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 105 days and under 112 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000160 ! 14-week-old stage
-relationship: part_of MmusDv:0000063 ! 3-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "112.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000160 ! 14-week-old stage (mouse)
+relationship: part_of MmusDv:0000063 ! 3-month-old stage (mouse)
property_value: end_dpb "112.0" xsd:float
property_value: end_wpb "16.0" xsd:float
-property_value: end_wpb "16.0" xsd:float
-property_value: IAO:0000589 "15-week-old stage (mouse)" xsd:string
property_value: start_dpb "105.0" xsd:float
-property_value: start_dpb "105.0" xsd:float
-property_value: start_wpb "15.0" xsd:float
property_value: start_wpb "15.0" xsd:float
[Term]
id: MmusDv:0000162
-name: 16-week-old stage
name: 16-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 112 days and under 119 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000161 ! 15-week-old stage
-relationship: part_of MmusDv:0000064 ! 4-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "119.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000161 ! 15-week-old stage (mouse)
+relationship: part_of MmusDv:0000064 ! 4-month-old stage (mouse)
property_value: end_dpb "119.0" xsd:float
property_value: end_wpb "17.0" xsd:float
-property_value: end_wpb "17.0" xsd:float
-property_value: IAO:0000589 "16-week-old stage (mouse)" xsd:string
-property_value: start_dpb "112.0" xsd:float
property_value: start_dpb "112.0" xsd:float
property_value: start_wpb "16.0" xsd:float
-property_value: start_wpb "16.0" xsd:float
[Term]
id: MmusDv:0000163
-name: 17-week-old stage
name: 17-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 119 days and under 126 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000162 ! 16-week-old stage
-relationship: part_of MmusDv:0000064 ! 4-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "126.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000162 ! 16-week-old stage (mouse)
+relationship: part_of MmusDv:0000064 ! 4-month-old stage (mouse)
property_value: end_dpb "126.0" xsd:float
property_value: end_wpb "18.0" xsd:float
-property_value: end_wpb "18.0" xsd:float
-property_value: IAO:0000589 "17-week-old stage (mouse)" xsd:string
property_value: start_dpb "119.0" xsd:float
-property_value: start_dpb "119.0" xsd:float
-property_value: start_wpb "17.0" xsd:float
property_value: start_wpb "17.0" xsd:float
[Term]
id: MmusDv:0000164
-name: 18-week-old stage
name: 18-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 126 days and under 133 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000163 ! 17-week-old stage
-relationship: part_of MmusDv:0000064 ! 4-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "133.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000163 ! 17-week-old stage (mouse)
+relationship: part_of MmusDv:0000064 ! 4-month-old stage (mouse)
property_value: end_dpb "133.0" xsd:float
property_value: end_wpb "19.0" xsd:float
-property_value: end_wpb "19.0" xsd:float
-property_value: IAO:0000589 "18-week-old stage (mouse)" xsd:string
-property_value: start_dpb "126.0" xsd:float
property_value: start_dpb "126.0" xsd:float
property_value: start_wpb "18.0" xsd:float
-property_value: start_wpb "18.0" xsd:float
[Term]
id: MmusDv:0000165
-name: 19-week-old stage
name: 19-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 133 days and under 140 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000164 ! 18-week-old stage
-relationship: part_of MmusDv:0000064 ! 4-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "140.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000164 ! 18-week-old stage (mouse)
+relationship: part_of MmusDv:0000064 ! 4-month-old stage (mouse)
property_value: end_dpb "140.0" xsd:float
property_value: end_wpb "20.0" xsd:float
-property_value: end_wpb "20.0" xsd:float
-property_value: IAO:0000589 "19-week-old stage (mouse)" xsd:string
property_value: start_dpb "133.0" xsd:float
-property_value: start_dpb "133.0" xsd:float
-property_value: start_wpb "19.0" xsd:float
property_value: start_wpb "19.0" xsd:float
[Term]
id: MmusDv:0000166
-name: 20-week-old stage
name: 20-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 140 days and under 147 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000165 ! 19-week-old stage
-relationship: part_of MmusDv:0000064 ! 4-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "147.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000165 ! 19-week-old stage (mouse)
+relationship: part_of MmusDv:0000064 ! 4-month-old stage (mouse)
property_value: end_dpb "147.0" xsd:float
property_value: end_wpb "21.0" xsd:float
-property_value: end_wpb "21.0" xsd:float
-property_value: IAO:0000589 "20-week-old stage (mouse)" xsd:string
-property_value: start_dpb "140.0" xsd:float
property_value: start_dpb "140.0" xsd:float
property_value: start_wpb "20.0" xsd:float
-property_value: start_wpb "20.0" xsd:float
[Term]
id: MmusDv:0000167
-name: 21-week-old stage
name: 21-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 147 days and under 154 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000166 ! 20-week-old stage (mouse)
-relationship: part_of MmusDv:0000069 ! 5-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
+relationship: part_of MmusDv:0000069 ! 5-month-old stage (mouse)
property_value: end_dpb "154.0" xsd:float
-property_value: end_dpb "154.0" xsd:float
-property_value: end_wpb "22.0" xsd:float
property_value: end_wpb "22.0" xsd:float
-property_value: IAO:0000589 "21-week-old stage (mouse)" xsd:string
property_value: start_dpb "147.0" xsd:float
-property_value: start_dpb "147.0" xsd:float
-property_value: start_wpb "21.0" xsd:float
property_value: start_wpb "21.0" xsd:float
[Term]
id: MmusDv:0000168
-name: 22-week-old stage
name: 22-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 154 days and under 161 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000167 ! 21-week-old stage (mouse)
-relationship: part_of MmusDv:0000069 ! 5-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "161.0" xsd:float
+relationship: part_of MmusDv:0000069 ! 5-month-old stage (mouse)
property_value: end_dpb "161.0" xsd:float
property_value: end_wpb "23.0" xsd:float
-property_value: end_wpb "23.0" xsd:float
-property_value: IAO:0000589 "22-week-old stage (mouse)" xsd:string
-property_value: start_dpb "154.0" xsd:float
property_value: start_dpb "154.0" xsd:float
property_value: start_wpb "22.0" xsd:float
-property_value: start_wpb "22.0" xsd:float
[Term]
id: MmusDv:0000169
-name: 23-week-old stage
name: 23-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 161 days and under 168 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000168 ! 22-week-old stage
-relationship: part_of MmusDv:0000069 ! 5-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "168.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000168 ! 22-week-old stage (mouse)
+relationship: part_of MmusDv:0000069 ! 5-month-old stage (mouse)
property_value: end_dpb "168.0" xsd:float
property_value: end_wpb "24.0" xsd:float
-property_value: end_wpb "24.0" xsd:float
-property_value: IAO:0000589 "23-week-old stage (mouse)" xsd:string
property_value: start_dpb "161.0" xsd:float
-property_value: start_dpb "161.0" xsd:float
-property_value: start_wpb "23.0" xsd:float
property_value: start_wpb "23.0" xsd:float
[Term]
id: MmusDv:0000170
-name: 24-week-old stage
name: 24-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 168 days and under 175 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000169 ! 23-week-old stage
-relationship: part_of MmusDv:0000069 ! 5-month-old stage
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "175.0" xsd:float
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000169 ! 23-week-old stage (mouse)
+relationship: part_of MmusDv:0000069 ! 5-month-old stage (mouse)
property_value: end_dpb "175.0" xsd:float
property_value: end_wpb "25.0" xsd:float
-property_value: end_wpb "25.0" xsd:float
-property_value: IAO:0000589 "24-week-old stage (mouse)" xsd:string
-property_value: start_dpb "168.0" xsd:float
property_value: start_dpb "168.0" xsd:float
property_value: start_wpb "24.0" xsd:float
-property_value: start_wpb "24.0" xsd:float
[Term]
id: MmusDv:0000171
-name: 25-week-old stage
name: 25-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 175 days and under 182 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000170 ! 24-week-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000170 ! 24-week-old stage (mouse)
relationship: part_of MmusDv:0000077 ! 6-month-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "182.0" xsd:float
-property_value: end_dpb "182.0" xsd:float
-property_value: end_wpb "26.0" xsd:float
property_value: end_wpb "26.0" xsd:float
-property_value: IAO:0000589 "25-week-old stage (mouse)" xsd:string
property_value: start_dpb "175.0" xsd:float
-property_value: start_dpb "175.0" xsd:float
-property_value: start_wpb "25.0" xsd:float
property_value: start_wpb "25.0" xsd:float
[Term]
id: MmusDv:0000172
-name: 26-week-old stage
name: 26-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 182 days and under 189 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000171 ! 25-week-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000171 ! 25-week-old stage (mouse)
relationship: part_of MmusDv:0000077 ! 6-month-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "189.0" xsd:float
property_value: end_dpb "189.0" xsd:float
property_value: end_wpb "27.0" xsd:float
-property_value: end_wpb "27.0" xsd:float
-property_value: IAO:0000589 "26-week-old stage (mouse)" xsd:string
-property_value: start_dpb "182.0" xsd:float
property_value: start_dpb "182.0" xsd:float
property_value: start_wpb "26.0" xsd:float
-property_value: start_wpb "26.0" xsd:float
[Term]
id: MmusDv:0000173
-name: 27-week-old stage
name: 27-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 189 days and under 196 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000172 ! 26-week-old stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by MmusDv:0000172 ! 26-week-old stage (mouse)
relationship: part_of MmusDv:0000077 ! 6-month-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "196.0" xsd:float
-property_value: end_dpb "196.0" xsd:float
-property_value: end_wpb "28.0" xsd:float
property_value: end_wpb "28.0" xsd:float
-property_value: IAO:0000589 "27-week-old stage (mouse)" xsd:string
property_value: start_dpb "189.0" xsd:float
-property_value: start_dpb "189.0" xsd:float
-property_value: start_wpb "27.0" xsd:float
property_value: start_wpb "27.0" xsd:float
[Term]
id: MmusDv:0000174
-name: 28-week-old stage
name: 28-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 196 days and under 203 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000173 ! 27-week-old stage (mouse)
relationship: part_of MmusDv:0000077 ! 6-month-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_dpb "203.0" xsd:float
property_value: end_dpb "203.0" xsd:float
property_value: end_wpb "29.0" xsd:float
-property_value: end_wpb "29.0" xsd:float
-property_value: IAO:0000589 "28-week-old stage (mouse)" xsd:string
-property_value: start_dpb "196.0" xsd:float
property_value: start_dpb "196.0" xsd:float
property_value: start_wpb "28.0" xsd:float
-property_value: start_wpb "28.0" xsd:float
[Term]
id: MmusDv:0000175
-name: 29-week-old stage
name: 29-week-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 203 days and under 210 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000174 ! 28-week-old stage (mouse)
relationship: part_of MmusDv:0000077 ! 6-month-old stage (mouse)
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
property_value: end_dpb "210.0" xsd:float
-property_value: end_dpb "210.0" xsd:float
-property_value: end_wpb "30.0" xsd:float
property_value: end_wpb "30.0" xsd:float
-property_value: IAO:0000589 "29-week-old stage (mouse)" xsd:string
property_value: start_dpb "203.0" xsd:float
-property_value: start_dpb "203.0" xsd:float
-property_value: start_wpb "29.0" xsd:float
property_value: start_wpb "29.0" xsd:float
[Term]
id: MmusDv:0000176
-name: 30-month-old stage
name: 30-month-old stage (mouse)
namespace: mouse_developmental_stage
def: "Mouse stage that refers to a mouse which is over 30 and under 31 months old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-is_a: MmusDv:0000000 ! life cycle stage
+is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by MmusDv:0000133 ! 29-month-old stage (mouse)
-relationship: part_of MmusDv:0000091 ! 20-month-old stage and over
-relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus
-property_value: end_mpb "31.0" xsd:float
+relationship: part_of MmusDv:0000091 ! 20-month-old stage and over (mouse)
property_value: end_mpb "31.0" xsd:float
-property_value: IAO:0000589 "30-month-old stage (mouse)" xsd:string
property_value: start_mpb "30.0" xsd:float
-property_value: start_mpb "30.0" xsd:float
-
-[Term]
-id: MmusDv:0000177
-name: infant stage
-namespace: mouse_developmental_stage
-def: "Nursing stage that follows the neonate stage in mouse and ends at weaning, at 22 days old." [Bgee:curator]
-subset: life_stage
-xref: UBERON:0034920
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000036 ! Theiler stage 27
-relationship: part_of MmusDv:0000138 ! nursing stage
-property_value: end_dpb "23.0" xsd:float
-property_value: end_wpb "1.0" xsd:float
-property_value: start_dpb "4.0" xsd:float
-property_value: start_wpb "0.6" xsd:float
-
-[Term]
-id: MmusDv:0000178
-name: juvenile stage
-namespace: mouse_developmental_stage
-def: "Mouse stage that refers to a weaned mouse which is over 23 days old, while still being an sexually immature mouse." [Bgee:curator]
-subset: granular_stage
-subset: life_stage
-xref: UBERON:0034919
-is_a: MmusDv:0000000 ! life cycle stage
-relationship: immediately_preceded_by MmusDv:0000177 ! infant stage
-relationship: part_of MmusDv:0000043 ! immature stage
-property_value: end_dpb "24.0" xsd:float
-property_value: start_dpb "23.0" xsd:float
[Term]
id: NCBITaxon:1
@@ -16208,56 +14017,6 @@ xref: GC_ID:1
xref: PMID:30365038
xref: PMID:32761142
-[Term]
-id: NCBITaxon:10066
-name: Muridae
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-xref: PMID:15371245
-is_a: NCBITaxon:337687 ! Muroidea
-
-[Term]
-id: NCBITaxon:10088
-name: Mus
-namespace: ncbi_taxonomy
-synonym: "mice" EXACT genbank_common_name []
-synonym: "mouse" EXACT OMO:0003003 []
-synonym: "Mus" EXACT scientific_name []
-xref: GC_ID:1
-is_a: NCBITaxon:39107 ! Murinae
-
-[Term]
-id: NCBITaxon:10090
-name: Mus musculus
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:85055
-synonym: "house mouse" EXACT genbank_common_name []
-synonym: "mouse" EXACT OMO:0003003 []
-xref: GC_ID:1
-is_a: NCBITaxon:862507 ! Mus
-
-[Term]
-id: NCBITaxon:10114
-name: Rattus
-namespace: ncbi_taxonomy
-synonym: "rat" EXACT OMO:0003003 []
-synonym: "rats" EXACT OMO:0003003 []
-xref: GC_ID:1
-is_a: NCBITaxon:39107 ! Murinae
-
-[Term]
-id: NCBITaxon:10116
-name: Rattus norvegicus
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:36465
-synonym: "brown rat" EXACT OMO:0003003 []
-synonym: "Mus norvegicus" RELATED synonym []
-synonym: "Norway rat" EXACT genbank_common_name []
-synonym: "rat" EXACT OMO:0003003 []
-synonym: "rats" EXACT OMO:0003003 []
-xref: GC_ID:1
-is_a: NCBITaxon:10114 ! Rattus
-
[Term]
id: NCBITaxon:117570
name: Teleostomi
@@ -16274,15 +14033,6 @@ synonym: "bony vertebrates" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:117570 ! Teleostomi
-[Term]
-id: NCBITaxon:119089
-name: Chromadorea
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:27837
-synonym: "Adenophorea" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:6231 ! Nematoda
-
[Term]
id: NCBITaxon:1206794
name: Ecdysozoa
@@ -16305,17 +14055,6 @@ synonym: "biota" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1 ! root
-[Term]
-id: NCBITaxon:1329799
-name: Archelosauria
-namespace: ncbi_taxonomy
-synonym: "Archosauria-Testudines" RELATED synonym []
-synonym: "Testudines + Archosauria group" RELATED synonym []
-xref: GC_ID:1
-xref: PMID:22839753
-xref: PMID:25450099
-is_a: NCBITaxon:32561 ! Sauria
-
[Term]
id: NCBITaxon:1338369
name: Dipnotetrapodomorpha
@@ -16324,87 +14063,13 @@ xref: GC_ID:1
is_a: NCBITaxon:8287 ! Sarcopterygii
[Term]
-id: NCBITaxon:1437010
-name: Boreoeutheria
+id: NCBITaxon:197562
+name: Pancrustacea
namespace: ncbi_taxonomy
-synonym: "Boreotheria" RELATED synonym []
xref: GC_ID:1
-xref: PMID:11743200
-xref: PMID:11791233
-is_a: NCBITaxon:9347 ! Eutheria
-
-[Term]
-id: NCBITaxon:1489341
-name: Osteoglossocephalai
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:32443 ! Teleostei
-
-[Term]
-id: NCBITaxon:1549675
-name: Galloanserae
-namespace: ncbi_taxonomy
-synonym: "ducks, geese, chickens, fowl, quail, currasows and allies" RELATED synonym []
-synonym: "Galloanseri" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:8825 ! Neognathae
-
-[Term]
-id: NCBITaxon:186623
-name: Actinopteri
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:7898 ! Actinopterygii
-
-[Term]
-id: NCBITaxon:186625
-name: Clupeocephala
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:1489341 ! Osteoglossocephalai
-
-[Term]
-id: NCBITaxon:186626
-name: Otophysi
-namespace: ncbi_taxonomy
-synonym: "Otophysa" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:32519 ! Ostariophysi
-
-[Term]
-id: NCBITaxon:186627
-name: Cypriniphysae
-namespace: ncbi_taxonomy
-synonym: "Cypriniphysi" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:186626 ! Otophysi
-
-[Term]
-id: NCBITaxon:186634
-name: Otomorpha
-namespace: ncbi_taxonomy
-synonym: "Ostarioclupeomorpha" RELATED synonym []
-synonym: "Otocephala" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:186625 ! Clupeocephala
-
-[Term]
-id: NCBITaxon:1963758
-name: Myomorpha
-namespace: ncbi_taxonomy
-synonym: "mice and others" EXACT genbank_common_name []
-synonym: "Sciurognathi" RELATED in_part []
-xref: GC_ID:1
-is_a: NCBITaxon:9989 ! Rodentia
-
-[Term]
-id: NCBITaxon:197562
-name: Pancrustacea
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-xref: PMID:10874751
-xref: PMID:11557979
-is_a: NCBITaxon:197563 ! Mandibulata
+xref: PMID:10874751
+xref: PMID:11557979
+is_a: NCBITaxon:197563 ! Mandibulata
[Term]
id: NCBITaxon:197563
@@ -16416,14 +14081,6 @@ xref: PMID:11557979
xref: PMID:9727836
is_a: NCBITaxon:6656 ! Arthropoda
-[Term]
-id: NCBITaxon:207598
-name: Homininae
-namespace: ncbi_taxonomy
-synonym: "Homo/Pan/Gorilla group" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:9604 ! Hominidae
-
[Term]
id: NCBITaxon:2172821
name: Multicrustacea
@@ -16431,20 +14088,6 @@ namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6657 ! Crustacea
-[Term]
-id: NCBITaxon:2301116
-name: Rhabditina
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:6236 ! Rhabditida
-
-[Term]
-id: NCBITaxon:2301119
-name: Rhabditomorpha
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:2301116 ! Rhabditina
-
[Term]
id: NCBITaxon:2697495
name: Spiralia
@@ -16452,20 +14095,6 @@ namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33317 ! Protostomia
-[Term]
-id: NCBITaxon:2743709
-name: Danionidae
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:30727 ! Cyprinoidei
-
-[Term]
-id: NCBITaxon:2743711
-name: Danioninae
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:2743709 ! Danionidae
-
[Term]
id: NCBITaxon:2759
name: Eukaryota
@@ -16482,106 +14111,6 @@ xref: PMID:23020233
xref: PMID:30257078
is_a: NCBITaxon:131567 ! cellular organisms
-[Term]
-id: NCBITaxon:30319
-name: Pipoidea
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:8342 ! Anura
-
-[Term]
-id: NCBITaxon:30727
-name: Cyprinoidei
-namespace: ncbi_taxonomy
-synonym: "Cyprinoidea" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:7952 ! Cypriniformes
-
-[Term]
-id: NCBITaxon:314145
-name: Laurasiatheria
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-xref: PMID:11214318
-xref: PMID:11214319
-xref: PMID:12878460
-is_a: NCBITaxon:1437010 ! Boreoeutheria
-
-[Term]
-id: NCBITaxon:314146
-name: Euarchontoglires
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-xref: PMID:11214319
-xref: PMID:12082125
-xref: PMID:12878460
-xref: PMID:15522813
-is_a: NCBITaxon:1437010 ! Boreoeutheria
-
-[Term]
-id: NCBITaxon:314147
-name: Glires
-namespace: ncbi_taxonomy
-synonym: "Rodents and rabbits" EXACT genbank_common_name []
-xref: GC_ID:1
-xref: PMID:11214319
-xref: PMID:12082125
-xref: PMID:15522813
-is_a: NCBITaxon:314146 ! Euarchontoglires
-
-[Term]
-id: NCBITaxon:314293
-name: Simiiformes
-namespace: ncbi_taxonomy
-synonym: "Anthropoidea" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:376913 ! Haplorrhini
-
-[Term]
-id: NCBITaxon:314295
-name: Hominoidea
-namespace: ncbi_taxonomy
-synonym: "ape" EXACT OMO:0003003 []
-synonym: "apes" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:9526 ! Catarrhini
-
-[Term]
-id: NCBITaxon:32341
-name: Sophophora
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:7215 ! Drosophila
-
-[Term]
-id: NCBITaxon:32346
-name: melanogaster group
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:32341 ! Sophophora
-
-[Term]
-id: NCBITaxon:32351
-name: melanogaster subgroup
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:32346 ! melanogaster group
-
-[Term]
-id: NCBITaxon:32443
-name: Teleostei
-namespace: ncbi_taxonomy
-synonym: "teleost fishes" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:41665 ! Neopterygii
-
-[Term]
-id: NCBITaxon:32519
-name: Ostariophysi
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:186634 ! Otomorpha
-
[Term]
id: NCBITaxon:32523
name: Tetrapoda
@@ -16598,23 +14127,6 @@ synonym: "amniotes" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:32523 ! Tetrapoda
-[Term]
-id: NCBITaxon:32525
-name: Theria
-namespace: ncbi_taxonomy
-synonym: "Theria" EXACT scientific_name []
-xref: GC_ID:1
-is_a: NCBITaxon:40674 ! Mammalia
-
-[Term]
-id: NCBITaxon:32561
-name: Sauria
-namespace: ncbi_taxonomy
-synonym: "Diapsida" RELATED synonym []
-synonym: "diapsids" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:8457 ! Sauropsida
-
[Term]
id: NCBITaxon:33154
name: Opisthokonta
@@ -16672,38 +14184,6 @@ synonym: "deuterostomes" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:33213 ! Bilateria
-[Term]
-id: NCBITaxon:337687
-name: Muroidea
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-xref: PMID:15019624
-xref: PMID:15371245
-is_a: NCBITaxon:1963758 ! Myomorpha
-
-[Term]
-id: NCBITaxon:35497
-name: Suina
-namespace: ncbi_taxonomy
-synonym: "Suiformes" RELATED in_part []
-xref: GC_ID:1
-is_a: NCBITaxon:91561 ! Artiodactyla
-
-[Term]
-id: NCBITaxon:376913
-name: Haplorrhini
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:9443 ! Primates
-
-[Term]
-id: NCBITaxon:39107
-name: Murinae
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:109679
-xref: GC_ID:1
-is_a: NCBITaxon:10066 ! Muridae
-
[Term]
id: NCBITaxon:40674
name: Mammalia
@@ -16713,109 +14193,6 @@ synonym: "mammals" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:32524 ! Amniota
-[Term]
-id: NCBITaxon:41665
-name: Neopterygii
-namespace: ncbi_taxonomy
-synonym: "Neopterygi" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:186623 ! Actinopteri
-
-[Term]
-id: NCBITaxon:41666
-name: Batrachia
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:8292 ! Amphibia
-
-[Term]
-id: NCBITaxon:436486
-name: Dinosauria
-namespace: ncbi_taxonomy
-synonym: "dinosaur" EXACT OMO:0003003 []
-synonym: "dinosaurs" EXACT OMO:0003003 []
-xref: GC_ID:1
-is_a: NCBITaxon:8492 ! Archosauria
-
-[Term]
-id: NCBITaxon:436489
-name: Saurischia
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:436486 ! Dinosauria
-
-[Term]
-id: NCBITaxon:436491
-name: Theropoda
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:436489 ! Saurischia
-
-[Term]
-id: NCBITaxon:436492
-name: Coelurosauria
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:436491 ! Theropoda
-
-[Term]
-id: NCBITaxon:43733
-name: Muscomorpha
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:43732
-synonym: "Asilomorpha" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:7203 ! Brachycera
-
-[Term]
-id: NCBITaxon:43738
-name: Schizophora
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:480117 ! Cyclorrhapha
-
-[Term]
-id: NCBITaxon:43741
-name: Acalyptratae
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:43738 ! Schizophora
-
-[Term]
-id: NCBITaxon:43746
-name: Ephydroidea
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:43741 ! Acalyptratae
-
-[Term]
-id: NCBITaxon:43845
-name: Drosophilinae
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:7214 ! Drosophilidae
-
-[Term]
-id: NCBITaxon:46877
-name: Drosophilini
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:43845 ! Drosophilinae
-
-[Term]
-id: NCBITaxon:480117
-name: Cyclorrhapha
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:480118 ! Eremoneura
-
-[Term]
-id: NCBITaxon:480118
-name: Eremoneura
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:43733 ! Muscomorpha
-
[Term]
id: NCBITaxon:50557
name: Insecta
@@ -16826,20 +14203,6 @@ synonym: "true insects" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:6960 ! Hexapoda
-[Term]
-id: NCBITaxon:55879
-name: Rhabditoidea
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:2301119 ! Rhabditomorpha
-
-[Term]
-id: NCBITaxon:55885
-name: Peloderinae
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:6243 ! Rhabditidae
-
[Term]
id: NCBITaxon:6072
name: Eumetazoa
@@ -16870,31 +14233,6 @@ synonym: "roundworms" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:1206794 ! Ecdysozoa
-[Term]
-id: NCBITaxon:6236
-name: Rhabditida
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:33251
-alt_id: NCBITaxon:6308
-synonym: "Strongylida" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:119089 ! Chromadorea
-
-[Term]
-id: NCBITaxon:6237
-name: Caenorhabditis
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:55885 ! Peloderinae
-
-[Term]
-id: NCBITaxon:6243
-name: Rhabditidae
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:54603
-xref: GC_ID:1
-is_a: NCBITaxon:55879 ! Rhabditoidea
-
[Term]
id: NCBITaxon:6447
name: Mollusca
@@ -16953,22 +14291,6 @@ synonym: "moths" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:85604 ! Amphiesmenoptera
-[Term]
-id: NCBITaxon:7147
-name: Diptera
-namespace: ncbi_taxonomy
-synonym: "flies" EXACT genbank_common_name []
-synonym: "flies" RELATED blast_name []
-xref: GC_ID:1
-is_a: NCBITaxon:33392 ! Endopterygota
-
-[Term]
-id: NCBITaxon:7203
-name: Brachycera
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:7147 ! Diptera
-
[Term]
id: NCBITaxon:72037
name: Hexanauplia
@@ -16977,35 +14299,6 @@ alt_id: NCBITaxon:2172815
xref: GC_ID:1
is_a: NCBITaxon:2172821 ! Multicrustacea
-[Term]
-id: NCBITaxon:7214
-name: Drosophilidae
-namespace: ncbi_taxonomy
-synonym: "pomace flies" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:43746 ! Ephydroidea
-
-[Term]
-id: NCBITaxon:7215
-name: Drosophila
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:7326
-synonym: "Drosophila" EXACT scientific_name []
-synonym: "fruit flies" EXACT genbank_common_name []
-synonym: "fruit fly" EXACT OMO:0003003 []
-xref: GC_ID:1
-is_a: NCBITaxon:46877 ! Drosophilini
-
-[Term]
-id: NCBITaxon:7227
-name: Drosophila melanogaster
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:2267365
-synonym: "fruit fly" EXACT genbank_common_name []
-synonym: "Sophophora melanogaster" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:32351 ! melanogaster subgroup
-
[Term]
id: NCBITaxon:7496
name: Pterygota
@@ -17052,38 +14345,6 @@ synonym: "jawed vertebrates" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7742 ! Vertebrata
-[Term]
-id: NCBITaxon:7898
-name: Actinopterygii
-namespace: ncbi_taxonomy
-synonym: "Actinopterygi" RELATED synonym []
-synonym: "bony fishes" RELATED blast_name []
-synonym: "fish" EXACT OMO:0003003 []
-synonym: "fishes" EXACT OMO:0003003 []
-synonym: "Osteichthyes" RELATED in_part []
-synonym: "ray-finned fishes" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:117571 ! Euteleostomi
-
-[Term]
-id: NCBITaxon:7952
-name: Cypriniformes
-namespace: ncbi_taxonomy
-synonym: "carps and others" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:186627 ! Cypriniphysae
-
-[Term]
-id: NCBITaxon:7954
-name: Danio
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:46777
-alt_id: NCBITaxon:487617
-synonym: "Brachydanio" RELATED synonym []
-synonym: "Celestichthys" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:2743711 ! Danioninae
-
[Term]
id: NCBITaxon:8287
name: Sarcopterygii
@@ -17101,258 +14362,33 @@ xref: GC_ID:1
is_a: NCBITaxon:32523 ! Tetrapoda
[Term]
-id: NCBITaxon:8342
-name: Anura
+id: NCBITaxon:85512
+name: Dicondylia
namespace: ncbi_taxonomy
-synonym: "anurans" EXACT OMO:0003003 []
-synonym: "frogs" EXACT OMO:0003003 []
-synonym: "frogs & toads" RELATED blast_name []
-synonym: "frogs and toads" EXACT genbank_common_name []
-synonym: "Salientia" RELATED synonym []
xref: GC_ID:1
-is_a: NCBITaxon:41666 ! Batrachia
+is_a: NCBITaxon:50557 ! Insecta
[Term]
-id: NCBITaxon:8352
-name: Pipidae
+id: NCBITaxon:85604
+name: Amphiesmenoptera
namespace: ncbi_taxonomy
-synonym: "pipid frogs" EXACT OMO:0003003 []
-synonym: "tongueless frogs" EXACT genbank_common_name []
xref: GC_ID:1
-xref: PMID:2385174
-is_a: NCBITaxon:30319 ! Pipoidea
+is_a: NCBITaxon:33392 ! Endopterygota
[Term]
-id: NCBITaxon:8353
-name: Xenopus
+id: NCBITaxon:88770
+name: Panarthropoda
namespace: ncbi_taxonomy
-synonym: "Xenopus" EXACT scientific_name []
xref: GC_ID:1
-xref: PMID:2385174
-is_a: NCBITaxon:8360 ! Xenopodinae
+is_a: NCBITaxon:1206794 ! Ecdysozoa
[Term]
-id: NCBITaxon:8360
-name: Xenopodinae
+id: NCBITaxon:89593
+name: Craniata
namespace: ncbi_taxonomy
-synonym: "Siluraninae" RELATED synonym []
+synonym: "Craniata" EXACT scientific_name []
xref: GC_ID:1
-xref: PMID:2385174
-is_a: NCBITaxon:8352 ! Pipidae
-
-[Term]
-id: NCBITaxon:8457
-name: Sauropsida
-namespace: ncbi_taxonomy
-synonym: "sauropsids" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:32524 ! Amniota
-
-[Term]
-id: NCBITaxon:8492
-name: Archosauria
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:1329799 ! Archelosauria
-
-[Term]
-id: NCBITaxon:85512
-name: Dicondylia
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:50557 ! Insecta
-
-[Term]
-id: NCBITaxon:85604
-name: Amphiesmenoptera
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:33392 ! Endopterygota
-
-[Term]
-id: NCBITaxon:862507
-name: Mus
-namespace: ncbi_taxonomy
-synonym: "Mus" EXACT scientific_name []
-xref: GC_ID:1
-is_a: NCBITaxon:10088 ! Mus
-
-[Term]
-id: NCBITaxon:8782
-name: Aves
-namespace: ncbi_taxonomy
-synonym: "avian" RELATED synonym []
-synonym: "birds" EXACT genbank_common_name []
-synonym: "birds" RELATED blast_name []
-xref: GC_ID:1
-is_a: NCBITaxon:436492 ! Coelurosauria
-
-[Term]
-id: NCBITaxon:8825
-name: Neognathae
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:8782 ! Aves
-
-[Term]
-id: NCBITaxon:88770
-name: Panarthropoda
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:1206794 ! Ecdysozoa
-
-[Term]
-id: NCBITaxon:89593
-name: Craniata
-namespace: ncbi_taxonomy
-synonym: "Craniata" EXACT scientific_name []
-xref: GC_ID:1
-is_a: NCBITaxon:7711 ! Chordata
-
-[Term]
-id: NCBITaxon:8976
-name: Galliformes
-namespace: ncbi_taxonomy
-synonym: "landfowls" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:1549675 ! Galloanserae
-
-[Term]
-id: NCBITaxon:9005
-name: Phasianidae
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:9099
-synonym: "turkeys" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:8976 ! Galliformes
-
-[Term]
-id: NCBITaxon:9030
-name: Gallus
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:9072 ! Phasianinae
-
-[Term]
-id: NCBITaxon:9031
-name: Gallus gallus
-namespace: ncbi_taxonomy
-synonym: "bantam" EXACT OMO:0003003 []
-synonym: "chicken" EXACT genbank_common_name []
-synonym: "chickens" EXACT OMO:0003003 []
-synonym: "Gallus domesticus" EXACT equivalent_name []
-synonym: "Gallus gallus domesticus" RELATED synonym []
-synonym: "Phasianus gallus" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:9030 ! Gallus
-
-[Term]
-id: NCBITaxon:9072
-name: Phasianinae
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:9005 ! Phasianidae
-
-[Term]
-id: NCBITaxon:91561
-name: Artiodactyla
-namespace: ncbi_taxonomy
-synonym: "Cetartiodactyla" RELATED synonym []
-synonym: "even-toed ungulates & whales" EXACT genbank_common_name []
-synonym: "even-toed ungulates & whales" RELATED blast_name []
-xref: GC_ID:1
-is_a: NCBITaxon:314145 ! Laurasiatheria
-
-[Term]
-id: NCBITaxon:9347
-name: Eutheria
-namespace: ncbi_taxonomy
-synonym: "eutherian mammals" EXACT OMO:0003003 []
-synonym: "placental mammals" EXACT OMO:0003003 []
-synonym: "Placentalia" RELATED synonym []
-synonym: "placentals" EXACT genbank_common_name []
-synonym: "placentals" RELATED blast_name []
-xref: GC_ID:1
-is_a: NCBITaxon:32525 ! Theria
-
-[Term]
-id: NCBITaxon:9443
-name: Primates
-namespace: ncbi_taxonomy
-synonym: "Primata" RELATED synonym []
-synonym: "primate" EXACT equivalent_name []
-synonym: "primates" RELATED blast_name []
-xref: GC_ID:1
-is_a: NCBITaxon:314146 ! Euarchontoglires
-
-[Term]
-id: NCBITaxon:9526
-name: Catarrhini
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:314293 ! Simiiformes
-
-[Term]
-id: NCBITaxon:9604
-name: Hominidae
-namespace: ncbi_taxonomy
-synonym: "great apes" EXACT genbank_common_name []
-synonym: "Pongidae" RELATED synonym []
-xref: GC_ID:1
-is_a: NCBITaxon:314295 ! Hominoidea
-
-[Term]
-id: NCBITaxon:9605
-name: Homo
-namespace: ncbi_taxonomy
-synonym: "humans" EXACT OMO:0003003 []
-xref: GC_ID:1
-is_a: NCBITaxon:207598 ! Homininae
-
-[Term]
-id: NCBITaxon:9606
-name: Homo sapiens
-namespace: ncbi_taxonomy
-synonym: "human" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:9605 ! Homo
-
-[Term]
-id: NCBITaxon:9821
-name: Suidae
-namespace: ncbi_taxonomy
-alt_id: NCBITaxon:39423
-synonym: "boars" EXACT OMO:0003003 []
-synonym: "pigs" EXACT genbank_common_name []
-xref: GC_ID:1
-is_a: NCBITaxon:35497 ! Suina
-
-[Term]
-id: NCBITaxon:9822
-name: Sus
-namespace: ncbi_taxonomy
-xref: GC_ID:1
-is_a: NCBITaxon:9821 ! Suidae
-
-[Term]
-id: NCBITaxon:9823
-name: Sus scrofa
-namespace: ncbi_taxonomy
-synonym: "pig" EXACT genbank_common_name []
-synonym: "pigs" EXACT OMO:0003003 []
-synonym: "swine" EXACT OMO:0003003 []
-synonym: "wild boar" EXACT OMO:0003003 []
-xref: GC_ID:1
-is_a: NCBITaxon:9822 ! Sus
-
-[Term]
-id: NCBITaxon:9989
-name: Rodentia
-namespace: ncbi_taxonomy
-synonym: "rodent" EXACT genbank_common_name []
-synonym: "rodents" RELATED blast_name []
-xref: GC_ID:1
-is_a: NCBITaxon:314147 ! Glires
+is_a: NCBITaxon:7711 ! Chordata
[Term]
id: OariDv:0000011
@@ -17365,7 +14401,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by UBERON:0000106 ! zygote stage
relationship: part_of UBERON:0000107 ! cleavage stage
property_value: end_dpf "4.0" xsd:float
-property_value: IAO:0000589 "day 1-3 cleavage stage (sheep)" xsd:string
property_value: start_dpf "1.0" xsd:float
[Term]
@@ -17379,7 +14414,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000011 ! day 1-3 cleavage stage (sheep)
relationship: part_of UBERON:0000107 ! cleavage stage
property_value: end_dpf "6.0" xsd:float
-property_value: IAO:0000589 "day 4-5 morula stage (sheep)" xsd:string
property_value: start_dpf "4.0" xsd:float
[Term]
@@ -17393,7 +14427,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000012 ! day 4-5 morula stage (sheep)
relationship: part_of UBERON:0000108 ! blastula stage
property_value: end_dpf "10.0" xsd:float
-property_value: IAO:0000589 "day 6-9 embryonic stage (sheep)" xsd:string
property_value: start_dpf "6.0" xsd:float
[Term]
@@ -17406,7 +14439,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000013 ! day 6-9 embryonic stage (sheep)
relationship: part_of UBERON:0000108 ! blastula stage
property_value: end_dpf "11.0" xsd:float
-property_value: IAO:0000589 "day 10 embryonic stage (sheep)" xsd:string
property_value: start_dpf "10.0" xsd:float
[Term]
@@ -17419,7 +14451,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000014 ! day 10 embryonic stage (sheep)
relationship: part_of UBERON:0000108 ! blastula stage
property_value: end_dpf "12.0" xsd:float
-property_value: IAO:0000589 "day 11 embryonic stage (sheep)" xsd:string
property_value: start_dpf "11.0" xsd:float
[Term]
@@ -17433,7 +14464,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000015 ! day 11 embryonic stage (sheep)
relationship: part_of UBERON:0000109 ! gastrula stage
property_value: end_dpf "13.0" xsd:float
-property_value: IAO:0000589 "day 12 embryonic stage (sheep)" xsd:string
property_value: start_dpf "12.0" xsd:float
[Term]
@@ -17446,7 +14476,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000016 ! day 12 embryonic stage (sheep)
relationship: part_of UBERON:0000109 ! gastrula stage
property_value: end_dpf "14.0" xsd:float
-property_value: IAO:0000589 "day 13 embryonic stage (sheep)" xsd:string
property_value: start_dpf "13.0" xsd:float
[Term]
@@ -17459,7 +14488,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000017 ! day 13 embryonic stage (sheep)
relationship: part_of UBERON:0000109 ! gastrula stage
property_value: end_dpf "15.0" xsd:float
-property_value: IAO:0000589 "day 14 embryonic stage (sheep)" xsd:string
property_value: start_dpf "14.0" xsd:float
[Term]
@@ -17472,7 +14500,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000018 ! day 14 embryonic stage (sheep)
relationship: part_of UBERON:0000110 ! neurula stage
property_value: end_dpf "16.0" xsd:float
-property_value: IAO:0000589 "day 15 embryonic stage (sheep)" xsd:string
property_value: start_dpf "15.0" xsd:float
[Term]
@@ -17485,7 +14512,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000019 ! day 15 embryonic stage (sheep)
relationship: part_of UBERON:0000110 ! neurula stage
property_value: end_dpf "17.0" xsd:float
-property_value: IAO:0000589 "day 16 embryonic stage (sheep)" xsd:string
property_value: start_dpf "16.0" xsd:float
[Term]
@@ -17498,7 +14524,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000020 ! day 16 embryonic stage (sheep)
relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: end_dpf "20.0" xsd:float
-property_value: IAO:0000589 "day 17-19 embryonic stage (sheep)" xsd:string
property_value: start_dpf "17.0" xsd:float
[Term]
@@ -17511,7 +14536,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000021 ! day 17-19 embryonic stage (sheep)
relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: end_dpf "21.0" xsd:float
-property_value: IAO:0000589 "day 20 embryonic stage (sheep)" xsd:string
property_value: start_dpf "20.0" xsd:float
[Term]
@@ -17523,7 +14547,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by OariDv:0000022 ! day 20 embryonic stage (sheep)
relationship: part_of UBERON:0000111 ! organogenesis stage
property_value: end_dpf "146.0" xsd:float
-property_value: IAO:0000589 "day 21 and over embryonic stage (sheep)" xsd:string
property_value: start_dpf "21.0" xsd:float
[Term]
@@ -17857,7 +14880,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_mpb "22.0" xsd:float
-property_value: IAO:0000589 "21-month-old stage (bonobo)" xsd:string
property_value: start_mpb "21.0" xsd:float
[Term]
@@ -17871,7 +14893,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000006 ! 21-month-old stage (bonobo)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_mpb "23.0" xsd:float
-property_value: IAO:0000589 "22-month-old stage (bonobo)" xsd:string
property_value: start_mpb "22.0" xsd:float
[Term]
@@ -17885,7 +14906,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000007 ! 22-month-old stage (bonobo)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_mpb "24.0" xsd:float
-property_value: IAO:0000589 "23-month-old stage (bonobo)" xsd:string
property_value: start_mpb "23.0" xsd:float
[Term]
@@ -17900,7 +14920,6 @@ relationship: immediately_preceded_by PpanDv:0000008 ! 23-month-old stage (bonob
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_mpb "36.0" xsd:float
property_value: end_ypb "3.0" xsd:float
-property_value: IAO:0000589 "2-year-old stage (bonobo)" xsd:string
property_value: start_mpb "24.0" xsd:float
property_value: start_ypb "2.0" xsd:float
@@ -17915,7 +14934,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000009 ! 2-year-old stage (bonobo)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "4.0" xsd:float
-property_value: IAO:0000589 "3-year-old stage (bonobo)" xsd:string
property_value: start_ypb "3.0" xsd:float
[Term]
@@ -17929,7 +14947,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000010 ! 3-year-old stage (bonobo)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "5.0" xsd:float
-property_value: IAO:0000589 "4-year-old stage (bonobo)" xsd:string
property_value: start_ypb "4.0" xsd:float
[Term]
@@ -17943,7 +14960,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000011 ! 4-year-old stage (bonobo)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "6.0" xsd:float
-property_value: IAO:0000589 "5-year-old stage (bonobo)" xsd:string
property_value: start_ypb "5.0" xsd:float
[Term]
@@ -17957,7 +14973,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000012 ! 5-year-old stage (bonobo)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "7.0" xsd:float
-property_value: IAO:0000589 "6-year-old stage (bonobo)" xsd:string
property_value: start_ypb "6.0" xsd:float
[Term]
@@ -17971,7 +14986,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000013 ! 6-year-old stage (bonobo)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "8.0" xsd:float
-property_value: IAO:0000589 "7-year-old stage (bonobo)" xsd:string
property_value: start_ypb "7.0" xsd:float
[Term]
@@ -17986,7 +15000,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000014 ! 7-year-old stage (bonobo)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "8.75" xsd:float
-property_value: IAO:0000589 "8-year-old immature stage (bonobo)" xsd:string
property_value: start_ypb "8.0" xsd:float
[Term]
@@ -18000,7 +15013,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "9.0" xsd:float
-property_value: IAO:0000589 "8-year-old mature stage (bonobo)" xsd:string
property_value: start_ypb "8.75" xsd:float
[Term]
@@ -18014,7 +15026,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000018 ! 8-year-old mature stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "10.0" xsd:float
-property_value: IAO:0000589 "9-year-old stage (bonobo)" xsd:string
property_value: start_ypb "9.0" xsd:float
[Term]
@@ -18028,7 +15039,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000019 ! 9-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "11.0" xsd:float
-property_value: IAO:0000589 "10-year-old stage (bonobo)" xsd:string
property_value: start_ypb "10.0" xsd:float
[Term]
@@ -18042,7 +15052,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000020 ! 10-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "12.0" xsd:float
-property_value: IAO:0000589 "11-year-old stage (bonobo)" xsd:string
property_value: start_ypb "11.0" xsd:float
[Term]
@@ -18056,7 +15065,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000021 ! 11-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "13.0" xsd:float
-property_value: IAO:0000589 "12-year-old stage (bonobo)" xsd:string
property_value: start_ypb "12.0" xsd:float
[Term]
@@ -18070,7 +15078,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000022 ! 12-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "14.0" xsd:float
-property_value: IAO:0000589 "13-year-old stage (bonobo)" xsd:string
property_value: start_ypb "13.0" xsd:float
[Term]
@@ -18084,7 +15091,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000023 ! 13-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "15.0" xsd:float
-property_value: IAO:0000589 "14-year-old stage (bonobo)" xsd:string
property_value: start_ypb "14.0" xsd:float
[Term]
@@ -18098,7 +15104,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000024 ! 14-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "16.0" xsd:float
-property_value: IAO:0000589 "15-year-old stage (bonobo)" xsd:string
property_value: start_ypb "15.0" xsd:float
[Term]
@@ -18112,7 +15117,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000025 ! 15-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "17.0" xsd:float
-property_value: IAO:0000589 "16-year-old stage (bonobo)" xsd:string
property_value: start_ypb "16.0" xsd:float
[Term]
@@ -18126,7 +15130,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000026 ! 16-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "18.0" xsd:float
-property_value: IAO:0000589 "17-year-old stage (bonobo)" xsd:string
property_value: start_ypb "17.0" xsd:float
[Term]
@@ -18140,7 +15143,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000027 ! 17-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "19.0" xsd:float
-property_value: IAO:0000589 "18-year-old stage (bonobo)" xsd:string
property_value: start_ypb "18.0" xsd:float
[Term]
@@ -18154,7 +15156,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000028 ! 18-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "20.0" xsd:float
-property_value: IAO:0000589 "19-year-old stage (bonobo)" xsd:string
property_value: start_ypb "19.0" xsd:float
[Term]
@@ -18168,7 +15169,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000029 ! 19-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "21.0" xsd:float
-property_value: IAO:0000589 "20-year-old stage (bonobo)" xsd:string
property_value: start_ypb "20.0" xsd:float
[Term]
@@ -18182,7 +15182,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000030 ! 20-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "22.0" xsd:float
-property_value: IAO:0000589 "21-year-old stage (bonobo)" xsd:string
property_value: start_ypb "21.0" xsd:float
[Term]
@@ -18196,7 +15195,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000031 ! 21-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "23.0" xsd:float
-property_value: IAO:0000589 "22-year-old stage (bonobo)" xsd:string
property_value: start_ypb "22.0" xsd:float
[Term]
@@ -18210,7 +15208,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000032 ! 22-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "24.0" xsd:float
-property_value: IAO:0000589 "23-year-old stage (bonobo)" xsd:string
property_value: start_ypb "23.0" xsd:float
[Term]
@@ -18224,7 +15221,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000033 ! 23-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "25.0" xsd:float
-property_value: IAO:0000589 "24-year-old stage (bonobo)" xsd:string
property_value: start_ypb "24.0" xsd:float
[Term]
@@ -18238,7 +15234,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000034 ! 24-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "26.0" xsd:float
-property_value: IAO:0000589 "25-year-old stage (bonobo)" xsd:string
property_value: start_ypb "25.0" xsd:float
[Term]
@@ -18252,7 +15247,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000035 ! 25-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "27.0" xsd:float
-property_value: IAO:0000589 "26-year-old stage (bonobo)" xsd:string
property_value: start_ypb "26.0" xsd:float
[Term]
@@ -18266,7 +15260,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000036 ! 26-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "28.0" xsd:float
-property_value: IAO:0000589 "27-year-old stage (bonobo)" xsd:string
property_value: start_ypb "27.0" xsd:float
[Term]
@@ -18280,7 +15273,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000037 ! 27-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "29.0" xsd:float
-property_value: IAO:0000589 "28-year-old stage (bonobo)" xsd:string
property_value: start_ypb "28.0" xsd:float
[Term]
@@ -18294,7 +15286,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PpanDv:0000038 ! 28-year-old stage (bonobo)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "30.0" xsd:float
-property_value: IAO:0000589 "29-year-old stage (bonobo)" xsd:string
property_value: start_ypb "29.0" xsd:float
[Term]
@@ -18307,7 +15298,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "4.0" xsd:float
-property_value: IAO:0000589 "3-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "3.0" xsd:float
[Term]
@@ -18321,7 +15311,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000006 ! 3-year-old stage (chimpanzee)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "5.0" xsd:float
-property_value: IAO:0000589 "4-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "4.0" xsd:float
[Term]
@@ -18335,7 +15324,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000007 ! 4-year-old stage (chimpanzee)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "6.0" xsd:float
-property_value: IAO:0000589 "5-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "5.0" xsd:float
[Term]
@@ -18349,7 +15337,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000008 ! 5-year-old stage (chimpanzee)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "7.0" xsd:float
-property_value: IAO:0000589 "6-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "6.0" xsd:float
[Term]
@@ -18363,7 +15350,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000009 ! 6-year-old stage (chimpanzee)
relationship: part_of UBERON:0034919 ! juvenile stage
property_value: end_ypb "8.0" xsd:float
-property_value: IAO:0000589 "7-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "7.0" xsd:float
[Term]
@@ -18376,7 +15362,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "9.0" xsd:float
-property_value: IAO:0000589 "8-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "8.0" xsd:float
[Term]
@@ -18390,7 +15375,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000013 ! 8-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "10.0" xsd:float
-property_value: IAO:0000589 "9-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "9.0" xsd:float
[Term]
@@ -18404,7 +15388,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000014 ! 9-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "11.0" xsd:float
-property_value: IAO:0000589 "10-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "10.0" xsd:float
[Term]
@@ -18418,7 +15401,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000015 ! 10-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "12.0" xsd:float
-property_value: IAO:0000589 "11-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "11.0" xsd:float
[Term]
@@ -18432,7 +15414,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000016 ! 11-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "13.0" xsd:float
-property_value: IAO:0000589 "12-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "12.0" xsd:float
[Term]
@@ -18446,7 +15427,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000017 ! 12-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "14.0" xsd:float
-property_value: IAO:0000589 "13-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "13.0" xsd:float
[Term]
@@ -18460,7 +15440,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000018 ! 13-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "15.0" xsd:float
-property_value: IAO:0000589 "14-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "14.0" xsd:float
[Term]
@@ -18474,7 +15453,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000019 ! 14-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "16.0" xsd:float
-property_value: IAO:0000589 "15-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "15.0" xsd:float
[Term]
@@ -18488,7 +15466,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000020 ! 15-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "17.0" xsd:float
-property_value: IAO:0000589 "16-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "16.0" xsd:float
[Term]
@@ -18502,7 +15479,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000021 ! 16-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "18.0" xsd:float
-property_value: IAO:0000589 "17-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "17.0" xsd:float
[Term]
@@ -18516,7 +15492,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000022 ! 17-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "19.0" xsd:float
-property_value: IAO:0000589 "18-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "18.0" xsd:float
[Term]
@@ -18530,7 +15505,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000023 ! 18-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "19.0" xsd:float
-property_value: IAO:0000589 "19-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "18.0" xsd:float
[Term]
@@ -18544,7 +15518,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000024 ! 19-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "21.0" xsd:float
-property_value: IAO:0000589 "20-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "20.0" xsd:float
[Term]
@@ -18558,7 +15531,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000025 ! 20-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "22.0" xsd:float
-property_value: IAO:0000589 "21-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "21.0" xsd:float
[Term]
@@ -18572,7 +15544,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000026 ! 21-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "23.0" xsd:float
-property_value: IAO:0000589 "22-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "22.0" xsd:float
[Term]
@@ -18586,7 +15557,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000027 ! 22-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "24.0" xsd:float
-property_value: IAO:0000589 "23-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "23.0" xsd:float
[Term]
@@ -18600,7 +15570,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000028 ! 23-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "25.0" xsd:float
-property_value: IAO:0000589 "24-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "24.0" xsd:float
[Term]
@@ -18614,7 +15583,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000029 ! 24-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "26.0" xsd:float
-property_value: IAO:0000589 "25-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "25.0" xsd:float
[Term]
@@ -18628,7 +15596,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000030 ! 25-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "27.0" xsd:float
-property_value: IAO:0000589 "26-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "26.0" xsd:float
[Term]
@@ -18642,7 +15609,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000031 ! 26-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "28.0" xsd:float
-property_value: IAO:0000589 "27-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "27.0" xsd:float
[Term]
@@ -18656,7 +15622,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000032 ! 27-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "29.0" xsd:float
-property_value: IAO:0000589 "28-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "28.0" xsd:float
[Term]
@@ -18670,7 +15635,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000033 ! 28-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "30.0" xsd:float
-property_value: IAO:0000589 "29-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "29.0" xsd:float
[Term]
@@ -18684,7 +15648,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000034 ! 29-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "31.0" xsd:float
-property_value: IAO:0000589 "30-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "30.0" xsd:float
[Term]
@@ -18698,7 +15661,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000035 ! 30-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "32.0" xsd:float
-property_value: IAO:0000589 "31-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "31.0" xsd:float
[Term]
@@ -18712,7 +15674,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000036 ! 31-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "33.0" xsd:float
-property_value: IAO:0000589 "32-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "32.0" xsd:float
[Term]
@@ -18726,7 +15687,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000037 ! 32-year-old stage (chimpanzee)
relationship: part_of UBERON:0018241 ! prime adult stage
property_value: end_ypb "34.0" xsd:float
-property_value: IAO:0000589 "33-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "33.0" xsd:float
[Term]
@@ -18739,7 +15699,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "35.0" xsd:float
-property_value: IAO:0000589 "34-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "34.0" xsd:float
[Term]
@@ -18753,7 +15712,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000040 ! 34-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "36.0" xsd:float
-property_value: IAO:0000589 "35-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "35.0" xsd:float
[Term]
@@ -18767,7 +15725,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000041 ! 35-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "37.0" xsd:float
-property_value: IAO:0000589 "36-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "36.0" xsd:float
[Term]
@@ -18781,7 +15738,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000042 ! 36-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "38.0" xsd:float
-property_value: IAO:0000589 "37-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "37.0" xsd:float
[Term]
@@ -18795,7 +15751,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000043 ! 37-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "39.0" xsd:float
-property_value: IAO:0000589 "38-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "38.0" xsd:float
[Term]
@@ -18809,7 +15764,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000044 ! 38-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "40.0" xsd:float
-property_value: IAO:0000589 "39-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "39.0" xsd:float
[Term]
@@ -18823,7 +15777,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000045 ! 39-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "41.0" xsd:float
-property_value: IAO:0000589 "40-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "40.0" xsd:float
[Term]
@@ -18837,7 +15790,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000046 ! 40-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "42.0" xsd:float
-property_value: IAO:0000589 "41-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "41.0" xsd:float
[Term]
@@ -18851,7 +15803,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000047 ! 41-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "43.0" xsd:float
-property_value: IAO:0000589 "42-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "42.0" xsd:float
[Term]
@@ -18865,7 +15816,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000048 ! 42-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "44.0" xsd:float
-property_value: IAO:0000589 "43-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "43.0" xsd:float
[Term]
@@ -18879,7 +15829,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000049 ! 43-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "45.0" xsd:float
-property_value: IAO:0000589 "44-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "44.0" xsd:float
[Term]
@@ -18892,7 +15841,6 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000050 ! 44-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
-property_value: IAO:0000589 "45-year-old and over stage (chimpanzee)" xsd:string
property_value: start_ypb "45.0" xsd:float
[Term]
@@ -18906,7 +15854,6 @@ is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by PtroDv:0000050 ! 44-year-old stage (chimpanzee)
relationship: part_of UBERON:0007222 ! late adult stage
property_value: end_ypb "46.0" xsd:float
-property_value: IAO:0000589 "45-year-old stage (chimpanzee)" xsd:string
property_value: start_ypb "45.0" xsd:float
[Term]
@@ -18918,9 +15865,7 @@ comment: This stage covers the first 16 days of the embryonic development, from
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0000068 ! embryo stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "16.0" xsd:float
-property_value: IAO:0000589 "embryonic stage (rat)" xsd:string
property_value: start_dpc "0.45" xsd:float
property_value: start_dpf "0.0" xsd:float
@@ -18934,9 +15879,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by UBERON:0000109 ! gastrula stage
relationship: part_of UBERON:0000109 ! gastrula stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "8.5" xsd:float
-property_value: IAO:0000589 "primitive streak stage (rat)" xsd:string
property_value: start_dpf "7.75" xsd:float
[Term]
@@ -18949,9 +15892,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by UBERON:0000110 ! neurula stage
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "12.375" xsd:float
-property_value: IAO:0000589 "tail bud embryo stage (rat)" xsd:string
property_value: start_dpf "11.0" xsd:float
[Term]
@@ -18964,9 +15905,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000008 ! tail bud embryo stage (rat)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "12.5" xsd:float
-property_value: IAO:0000589 "complete embryo stage (rat)" xsd:string
property_value: start_dpf "12.375" xsd:float
[Term]
@@ -18979,9 +15918,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000009 ! complete embryo stage (rat)
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "16.0" xsd:float
-property_value: IAO:0000589 "metamorphosing embryo stage (rat)" xsd:string
property_value: start_dpf "12.5" xsd:float
[Term]
@@ -18993,9 +15930,7 @@ subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_wpb "11.0" xsd:float
-property_value: IAO:0000589 "10-week-old stage (rat)" xsd:string
property_value: start_wpb "10.0" xsd:float
[Term]
@@ -19008,9 +15943,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000016 ! 10-week-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_wpb "12.0" xsd:float
-property_value: IAO:0000589 "11-week-old stage (rat)" xsd:string
property_value: start_wpb "11.0" xsd:float
[Term]
@@ -19023,10 +15956,8 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000017 ! 11-week-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "4.0" xsd:float
property_value: end_wpb "13.0" xsd:float
-property_value: IAO:0000589 "3-month-old stage (rat)" xsd:string
property_value: start_mpb "3.0" xsd:float
property_value: start_wpb "12.0" xsd:float
@@ -19040,9 +15971,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0018241 ! prime adult stage
relationship: preceded_by RnorDv:0000018 ! 3-month-old stage (rat)
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "7.0" xsd:float
-property_value: IAO:0000589 "4-6-month-old stage (rat)" xsd:string
property_value: start_mpb "4.0" xsd:float
[Term]
@@ -19055,9 +15984,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000018 ! 3-month-old stage (rat)
relationship: part_of RnorDv:0000019 ! 4-6-month-old stage (rat)
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "5.0" xsd:float
-property_value: IAO:0000589 "4-month-old stage (rat)" xsd:string
property_value: start_mpb "4.0" xsd:float
[Term]
@@ -19070,9 +15997,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000020 ! 4-month-old stage (rat)
relationship: part_of RnorDv:0000019 ! 4-6-month-old stage (rat)
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "6.0" xsd:float
-property_value: IAO:0000589 "5-month-old stage (rat)" xsd:string
property_value: start_mpb "5.0" xsd:float
[Term]
@@ -19085,9 +16010,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000021 ! 5-month-old stage (rat)
relationship: part_of RnorDv:0000019 ! 4-6-month-old stage (rat)
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "7.0" xsd:float
-property_value: IAO:0000589 "6-month-old stage (rat)" xsd:string
property_value: start_mpb "6.0" xsd:float
[Term]
@@ -19100,9 +16023,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000022 ! 6-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "8.0" xsd:float
-property_value: IAO:0000589 "7-month-old stage (rat)" xsd:string
property_value: start_mpb "7.0" xsd:float
[Term]
@@ -19115,9 +16036,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000023 ! 7-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "9.0" xsd:float
-property_value: IAO:0000589 "8-month-old stage (rat)" xsd:string
property_value: start_mpb "8.0" xsd:float
[Term]
@@ -19130,9 +16049,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000024 ! 8-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "9-month-old stage (rat)" xsd:string
property_value: start_mpb "9.0" xsd:float
[Term]
@@ -19145,9 +16062,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000025 ! 9-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "11.0" xsd:float
-property_value: IAO:0000589 "10-month-old stage (rat)" xsd:string
property_value: start_mpb "10.0" xsd:float
[Term]
@@ -19160,9 +16075,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000026 ! 10-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "12.0" xsd:float
-property_value: IAO:0000589 "11-month-old stage (rat)" xsd:string
property_value: start_mpb "11.0" xsd:float
[Term]
@@ -19175,9 +16088,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000027 ! 11-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "13.0" xsd:float
-property_value: IAO:0000589 "12-month-old stage (rat)" xsd:string
property_value: start_mpb "12.0" xsd:float
[Term]
@@ -19190,9 +16101,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000028 ! 12-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "14.0" xsd:float
-property_value: IAO:0000589 "13-month-old stage (rat)" xsd:string
property_value: start_mpb "13.0" xsd:float
[Term]
@@ -19205,9 +16114,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000029 ! 13-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "15.0" xsd:float
-property_value: IAO:0000589 "14-month-old stage (rat)" xsd:string
property_value: start_mpb "14.0" xsd:float
[Term]
@@ -19220,9 +16127,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000030 ! 14-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "16.0" xsd:float
-property_value: IAO:0000589 "15-month-old stage (rat)" xsd:string
property_value: start_mpb "15.0" xsd:float
[Term]
@@ -19235,9 +16140,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000031 ! 15-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "17.0" xsd:float
-property_value: IAO:0000589 "16-month-old stage (rat)" xsd:string
property_value: start_mpb "16.0" xsd:float
[Term]
@@ -19250,9 +16153,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000032 ! 16-month-old stage (rat)
relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "18.0" xsd:float
-property_value: IAO:0000589 "17-month-old stage (rat)" xsd:string
property_value: start_mpb "17.0" xsd:float
[Term]
@@ -19265,9 +16166,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000033 ! 17-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "19.0" xsd:float
-property_value: IAO:0000589 "18-month-old stage (rat)" xsd:string
property_value: start_mpb "18.0" xsd:float
[Term]
@@ -19280,9 +16179,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000034 ! 18-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "20.0" xsd:float
-property_value: IAO:0000589 "19-month-old stage (rat)" xsd:string
property_value: start_mpb "19.0" xsd:float
[Term]
@@ -19295,9 +16192,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000035 ! 19-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "21.0" xsd:float
-property_value: IAO:0000589 "20-month-old stage (rat)" xsd:string
property_value: start_mpb "20.0" xsd:float
[Term]
@@ -19310,9 +16205,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000036 ! 20-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "22.0" xsd:float
-property_value: IAO:0000589 "21-month-old stage (rat)" xsd:string
property_value: start_mpb "21.0" xsd:float
[Term]
@@ -19325,9 +16218,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000037 ! 21-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "23.0" xsd:float
-property_value: IAO:0000589 "22-month-old stage (rat)" xsd:string
property_value: start_mpb "22.0" xsd:float
[Term]
@@ -19340,9 +16231,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000038 ! 22-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "24.0" xsd:float
-property_value: IAO:0000589 "23-month-old stage (rat)" xsd:string
property_value: start_mpb "23.0" xsd:float
[Term]
@@ -19356,9 +16245,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: part_of UBERON:0007222 ! late adult stage
relationship: preceded_by RnorDv:0000039 ! 23-month-old stage (rat)
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "27.0" xsd:float
-property_value: IAO:0000589 "24-26-month-old stage (rat)" xsd:string
property_value: start_mpb "24.0" xsd:float
[Term]
@@ -19371,9 +16258,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000039 ! 23-month-old stage (rat)
relationship: part_of RnorDv:0000040 ! 24-26-month-old stage (rat)
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "25.0" xsd:float
-property_value: IAO:0000589 "24-month-old stage (rat)" xsd:string
property_value: start_mpb "24.0" xsd:float
[Term]
@@ -19386,9 +16271,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000041 ! 24-month-old stage (rat)
relationship: part_of RnorDv:0000040 ! 24-26-month-old stage (rat)
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "26.0" xsd:float
-property_value: IAO:0000589 "25-month-old stage (rat)" xsd:string
property_value: start_mpb "25.0" xsd:float
[Term]
@@ -19401,9 +16284,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000042 ! 25-month-old stage (rat)
relationship: part_of RnorDv:0000040 ! 24-26-month-old stage (rat)
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "27.0" xsd:float
-property_value: IAO:0000589 "26-month-old stage (rat)" xsd:string
property_value: start_mpb "26.0" xsd:float
[Term]
@@ -19416,9 +16297,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000043 ! 26-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "28.0" xsd:float
-property_value: IAO:0000589 "27-month-old stage (rat)" xsd:string
property_value: start_mpb "27.0" xsd:float
[Term]
@@ -19431,9 +16310,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000044 ! 27-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "29.0" xsd:float
-property_value: IAO:0000589 "28-month-old stage (rat)" xsd:string
property_value: start_mpb "28.0" xsd:float
[Term]
@@ -19446,9 +16323,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000045 ! 28-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "30.0" xsd:float
-property_value: IAO:0000589 "29-month-old stage (rat)" xsd:string
property_value: start_mpb "29.0" xsd:float
[Term]
@@ -19461,9 +16336,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000046 ! 29-month-old stage (rat)
relationship: part_of UBERON:0007222 ! late adult stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_mpb "31.0" xsd:float
-property_value: IAO:0000589 "30-month-old stage (rat)" xsd:string
property_value: start_mpb "30.0" xsd:float
[Term]
@@ -19476,9 +16349,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by UBERON:0000106 ! zygote stage
relationship: part_of UBERON:0000107 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "2.0" xsd:float
-property_value: IAO:0000589 "Witschi stage 2 (rat)" xsd:string
property_value: start_dpf "1.0" xsd:float
[Term]
@@ -19491,9 +16362,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000050 ! Witschi stage 2 (rat)
relationship: part_of UBERON:0000107 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "3.0" xsd:float
-property_value: IAO:0000589 "Witschi stage 3 (rat)" xsd:string
property_value: start_dpf "2.0" xsd:float
[Term]
@@ -19506,9 +16375,7 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000051 ! Witschi stage 3 (rat)
relationship: part_of UBERON:0000107 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "3.25" xsd:float
-property_value: IAO:0000589 "Witschi stage 4 (rat)" xsd:string
property_value: start_dpf "3.0" xsd:float
[Term]
@@ -19521,6742 +16388,5999 @@ subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
relationship: immediately_preceded_by RnorDv:0000052 ! Witschi stage 4 (rat)
relationship: part_of UBERON:0000107 ! cleavage stage
-relationship: RO:0002160 NCBITaxon:10116 ! only in taxon Rattus norvegicus
property_value: end_dpf "3.5" xsd:float
-property_value: IAO:0000589 "Witschi stage 5 (rat)" xsd:string
property_value: start_dpf "3.25" xsd:float
[Term]
-id: SscrDv:0000010
-name: 1-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 1 and under 2 weeks old." [Bgee:curator]
+id: SsalDv:0000008
+name: 16-cell stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 51 hpf (hour post-fertilization) (PMID:23239145, Table 1).
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000078 ! 6-day-old stage (pig)
-relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "2.0" xsd:float
-property_value: IAO:0000589 "1-week-old stage (pig)" xsd:string
-property_value: start_dpb "7.0" xsd:float
-property_value: start_wpb "1.0" xsd:float
+relationship: immediately_preceded_by UBERON:0007236 ! 8 cell stage
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: SscrDv:0000011
-name: 2-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 2 and under 3 weeks old." [Bgee:curator]
+id: SsalDv:0000009
+name: 32-cell stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 56 hpf (hour post-fertilization) (PMID:23239145, Table 1).
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000010 ! 1-week-old stage (pig)
-relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "3.0" xsd:float
-property_value: IAO:0000589 "2-week-old stage (pig)" xsd:string
-property_value: start_wpb "2.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000008 ! 16-cell stage (salmon)
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: SscrDv:0000012
-name: 3-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 3 and under 4 weeks old." [Bgee:curator]
+id: SsalDv:0000010
+name: 64-cell stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 63 hpf (hour post-fertilization) (PMID:23239145, Table 1).
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000011 ! 2-week-old stage (pig)
-relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "4.0" xsd:float
-property_value: IAO:0000589 "3-week-old stage (pig)" xsd:string
-property_value: start_dpb "21.0" xsd:float
-property_value: start_wpb "3.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000009 ! 32-cell stage (salmon)
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: SscrDv:0000013
-name: 4-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 4 and under 5 weeks old." [Bgee:curator]
+id: SsalDv:0000011
+name: 128-cell stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 69 hpf (hour post-fertilization) (PMID:23239145, Table 1).
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000012 ! 3-week-old stage (pig)
-relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "5.0" xsd:float
-property_value: IAO:0000589 "4-week-old stage (pig)" xsd:string
-property_value: start_wpb "4.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000010 ! 64-cell stage (salmon)
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: SscrDv:0000014
-name: 5-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 5 and under 6 weeks old." [Bgee:curator]
+id: SsalDv:0000013
+name: early blastula stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 5 dpf (day post-fertilization) (PMID:23239145, Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000013 ! 4-week-old stage (pig)
-relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "6.0" xsd:float
-property_value: IAO:0000589 "5-week-old stage (pig)" xsd:string
-property_value: start_wpb "5.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000011 ! 128-cell stage (salmon)
+relationship: part_of UBERON:0000108 ! blastula stage
[Term]
-id: SscrDv:0000015
-name: 6-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 6 and under 7 weeks old." [Bgee:curator]
+id: SsalDv:0000014
+name: mid blastula stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 7 dpf (day post-fertilization) (PMID:23239145, Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000014 ! 5-week-old stage (pig)
-relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "7.0" xsd:float
-property_value: IAO:0000589 "6-week-old stage (pig)" xsd:string
-property_value: start_wpb "6.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000013 ! early blastula stage (salmon)
+relationship: part_of UBERON:0000108 ! blastula stage
[Term]
-id: SscrDv:0000016
-name: 7-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 7 and under 8 weeks old." [Bgee:curator]
+id: SsalDv:0000015
+name: late blastula stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 10 dpf (day post-fertilization) (PMID:23239145, Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000015 ! 6-week-old stage (pig)
-relationship: part_of UBERON:0034920 ! infant stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "8.0" xsd:float
-property_value: IAO:0000589 "7-week-old stage (pig)" xsd:string
-property_value: start_wpb "7.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000014 ! mid blastula stage (salmon)
+relationship: part_of UBERON:0000108 ! blastula stage
[Term]
-id: SscrDv:0000017
-name: 8-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "2 month-old stage that refers to a pig which is over 56 days and under 64 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000017
+name: early gastrula:10% epiboly (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 13 dpf (day post-fertilization) (PMID:23239145, Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000016 ! 7-week-old stage (pig)
-relationship: part_of SscrDv:0000039 ! 2-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "9.0" xsd:float
-property_value: IAO:0000589 "8-week-old stage (pig)" xsd:string
-property_value: start_wpb "8.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000015 ! late blastula stage (salmon)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: SscrDv:0000018
-name: 21-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 21 and under 22 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000018
+name: pre-mid gastrula:30% epiboly (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 17 dpf (day post-fertilization) (PMID:23239145, Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "22.0" xsd:float
-property_value: IAO:0000589 "21-day-old stage (pig)" xsd:string
-property_value: start_dpb "21.0" xsd:float
-property_value: start_wpb "3.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000017 ! early gastrula:10% epiboly (salmon)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: SscrDv:0000019
-name: 22-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 22 and under 23 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000019
+name: mid gastrula:50% epiboly (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 21 dpf (day post-fertilization) (PMID:23239145, Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000018 ! 21-day-old stage (pig)
-relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "23.0" xsd:float
-property_value: IAO:0000589 "22-day-old stage (pig)" xsd:string
-property_value: start_dpb "22.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000018 ! pre-mid gastrula:30% epiboly (salmon)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: SscrDv:0000020
-name: 23-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 23 and under 24 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000020
+name: late gastrula:90% epiboly (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 24 dpf (day post-fertilization) (PMID:23239145, Table 1); 24 days at water temperature 7 means 168 day-degree (contributor https://github.com/garethgillard)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000019 ! 22-day-old stage (pig)
-relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "24.0" xsd:float
-property_value: IAO:0000589 "23-day-old stage (pig)" xsd:string
-property_value: start_dpb "23.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000019 ! mid gastrula:50% epiboly (salmon)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: SscrDv:0000021
-name: 24-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 24 and under 25 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000023
+name: 10-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 27 dpf (day post-fertilization) (PMID:23239145, Table 1) but at about 18 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000020 ! 23-day-old stage (pig)
-relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "25.0" xsd:float
-property_value: IAO:0000589 "24-day-old stage (pig)" xsd:string
-property_value: start_dpb "24.0" xsd:float
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000022
-name: 25-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 25 and under 26 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000024
+name: 15-16-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: development of eyes (visible laterally), at 19 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000021 ! 24-day-old stage (pig)
-relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "26.0" xsd:float
-property_value: IAO:0000589 "25-day-old stage (pig)" xsd:string
-property_value: start_dpb "25.0" xsd:float
+relationship: part_of UBERON:0000111 ! organogenesis stage
+relationship: preceded_by SsalDv:0000023 ! 10-somite-stage (salmon)
[Term]
-id: SscrDv:0000023
-name: 26-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 26 and under 27 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000025
+name: 18-21-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: otic vesicle formed; 90–100 % epiboly, at 20 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000022 ! 25-day-old stage (pig)
-relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "27.0" xsd:float
-property_value: IAO:0000589 "26-day-old stage (pig)" xsd:string
-property_value: start_dpb "26.0" xsd:float
+relationship: part_of UBERON:0000111 ! organogenesis stage
+relationship: preceded_by SsalDv:0000024 ! 15-16-somite-stage (salmon)
[Term]
-id: SscrDv:0000024
-name: 27-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 27 and under 28 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000026
+name: 22-24-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: start of segmentation of hindbrain into five rhombomeres; development of branchial chamber; cardiac tube in pericardial chamber, at 21 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000023 ! 26-day-old stage (pig)
-relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "28.0" xsd:float
-property_value: IAO:0000589 "27-day-old stage (pig)" xsd:string
-property_value: start_dpb "27.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000025 ! 18-21-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000025
-name: 28-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 28 and under 29 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000027
+name: 27-28-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: forebrain/midbrain boundary appearing; optic lens visible, at 22 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000024 ! 27-day-old stage (pig)
-relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "29.0" xsd:float
-property_value: IAO:0000589 "28-day-old stage (pig)" xsd:string
-property_value: start_dpb "28.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000026 ! 22-24-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000026
-name: 29-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 29 and under 30 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000028
+name: 31-34-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: gut and stomach primordia visible; myotomes acquiring chevron shape; midbrain/hindbrain boundary apparent; one branchial arch visible; heart tube bending forwards, at 23 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000025 ! 28-day-old stage (pig)
-relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "30.0" xsd:float
-property_value: IAO:0000589 "29-day-old stage (pig)" xsd:string
-property_value: start_dpb "29.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000027 ! 27-28-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000027
-name: 30-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 30 and under 31 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000029
+name: 36-37-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: choroid fissure complete; lumen in stomach and gut; operculum visible, at 24 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000026 ! 29-day-old stage (pig)
-relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "31.0" xsd:float
-property_value: IAO:0000589 "30-day-old stage (pig)" xsd:string
-property_value: start_dpb "30.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000028 ! 31-34-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000028
-name: 31-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 31 and under 32 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000030
+name: 38-40-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: hindgut formation; tail detached from yolk at most caudal somites; otoliths present in otic vesicles, at 25 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000027 ! 30-day-old stage (pig)
-relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "32.0" xsd:float
-property_value: IAO:0000589 "31-day-old stage (pig)" xsd:string
-property_value: start_dpb "31.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000029 ! 36-37-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000029
-name: 32-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 32 and under 33 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000031
+name: 41-44-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: separation of ventral mid-body from yolk; heart tube moved to the left; slow heart beat apparent; posterior end of pronephros level with end of gut; hindgut turned ventrally towards future anus, at 26 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000028 ! 31-day-old stage (pig)
-relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "33.0" xsd:float
-property_value: IAO:0000589 "32-day-old stage (pig)" xsd:string
-property_value: start_dpb "32.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000030 ! 38-40-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000030
-name: 33-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 33 and under 34 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000032
+name: 45-50-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: blood flow in dorsal aorta; two branchial arches; pectoral fin buds at somites 2–4 (45–47 somites), and weak sporadic contractions of the trunk (47–50 somites), at 27 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000029 ! 32-day-old stage (pig)
-relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "34.0" xsd:float
-property_value: IAO:0000589 "33-day-old stage (pig)" xsd:string
-property_value: start_dpb "33.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000031 ! 41-44-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000031
-name: 34-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 34 and under 35 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000033
+name: 49-52-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: two-chambered heart with double beat and faster heart rate; movement in response to dechorionation; lens separate from optic cup; rhombomere divisions starting to disappear; anus formed at level of somites 37–38, at 28 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000030 ! 33-day-old stage (pig)
-relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "35.0" xsd:float
-property_value: IAO:0000589 "34-day-old stage (pig)" xsd:string
-property_value: start_dpb "34.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000032 ! 45-50-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000032
-name: 35-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 35 and under 36 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000034
+name: 53-55-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: circulation visible along gut; rhombomere divisions almost disappeared; jaw developing; mesenchyme in caudal fin-fold, at 29 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000031 ! 34-day-old stage (pig)
-relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "36.0" xsd:float
-property_value: IAO:0000589 "35-day-old stage (pig)" xsd:string
-property_value: start_dpb "35.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000033 ! 49-52-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000033
-name: 36-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 36 and under 37 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000035
+name: 62-64-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: rhythmic movements observed in situ; strong movements in response to dechorionation; olfactory organ present; hatching glands apparent; dorsal and ventral fin-folds present; rhombomeres no longer distinct; three branchial arches; pectoral fin as high as it is wide, at 32 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000032 ! 35-day-old stage (pig)
-relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "37.0" xsd:float
-property_value: IAO:0000589 "36-day-old stage (pig)" xsd:string
-property_value: start_dpb "36.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000034 ! 53-55-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000034
-name: 37-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 37 and under 38 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000036
+name: 63-64-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: at 33 dpf in PMID:10393816 (Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000033 ! 36-day-old stage (pig)
-relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "38.0" xsd:float
-property_value: IAO:0000589 "37-day-old stage (pig)" xsd:string
-property_value: start_dpb "37.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000035 ! 62-64-somite-stage (salmon)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: SscrDv:0000035
-name: 38-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 38 and under 39 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000037
+name: 65-somite-stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: eyed, at 51 dpf (day post-fertilization) (PMID:23239145, Table 1)
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000034 ! 37-day-old stage (pig)
-relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "39.0" xsd:float
-property_value: IAO:0000589 "38-day-old stage (pig)" xsd:string
-property_value: start_dpb "38.0" xsd:float
+relationship: part_of UBERON:0000111 ! organogenesis stage
+relationship: preceded_by SsalDv:0000036 ! 63-64-somite-stage (salmon)
[Term]
-id: SscrDv:0000036
-name: 39-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 39 and under 40 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000043
+name: fry stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: comment: stage description from G.Gillard (https://github.com/garethgillard), months 3-6, 5-8 cm. Approximately 4- 5 weeks after hatching the young fish makes its way through the gravel and begins active feeding. At this point they are approximately 3 inches long and are called "fry" or fingerlings. One year after hatching the fry change coloring and acquire distinctive markings on their flanks which now distinguishes them as "parr" (http://www.uky.edu/~agrdanny/flyfish/life.htm).
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000035 ! 38-day-old stage (pig)
-relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "40.0" xsd:float
-property_value: IAO:0000589 "39-day-old stage (pig)" xsd:string
-property_value: start_dpb "39.0" xsd:float
+relationship: immediately_preceded_by UBERON:0000069 ! larval stage
+relationship: part_of UBERON:0000112 ! sexually immature stage
[Term]
-id: SscrDv:0000037
-name: 40-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 40 and under 41 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000044
+name: day 0 of fry stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+def: "The day of the alevin leaving its yolk sac and beginning to be a fry." [Bgee:curator]
+comment: dedicated to PMID:32293070; developmentally it makes sense to consider fry before feeding as a category. At least, when the yolk sac is depleted they are considered as at the fry stage. They fed then after that in experiments. They could feed before in the wild of course, so not completely tied to developmental stage, but a common point of difference the feeding (source: discussion with G.Gillard, https://github.com/garethgillard).
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000036 ! 39-day-old stage (pig)
-relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "41.0" xsd:float
-property_value: IAO:0000589 "40-day-old stage (pig)" xsd:string
-property_value: start_dpb "40.0" xsd:float
+relationship: part_of SsalDv:0000043 ! fry stage (salmon)
[Term]
-id: SscrDv:0000038
-name: 41-day-old stage (pig)
-namespace: pig_developmental_stage
-def: "Immature stage that refers to a pig which is over 41 and under 42 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000045
+name: day 1 of fry stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+def: "First day of the life of the Salmon salar living as a fry and actively feeding." [Bgee:curator]
+comment: dedicated to PMID:32293070
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000037 ! 40-day-old stage (pig)
-relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "42.0" xsd:float
-property_value: IAO:0000589 "41-day-old stage (pig)" xsd:string
-property_value: start_dpb "41.0" xsd:float
+relationship: immediately_preceded_by SsalDv:0000044 ! day 0 of fry stage (salmon)
+relationship: part_of SsalDv:0000043 ! fry stage (salmon)
[Term]
-id: SscrDv:0000039
-name: 2-month-old stage (pig)
-namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 2 and under 3 months old." [Bgee:curator]
+id: SsalDv:0000046
+name: day 48 of fry stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: dedicated to PMID:32293070
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000016 ! 7-week-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "3.0" xsd:float
-property_value: end_wpb "12.0" xsd:float
-property_value: IAO:0000589 "2-month-old stage (pig)" xsd:string
-property_value: start_mpb "2.0" xsd:float
-property_value: start_wpb "8.0" xsd:float
+relationship: part_of SsalDv:0000043 ! fry stage (salmon)
+relationship: preceded_by SsalDv:0000045 ! day 1 of fry stage (salmon)
[Term]
-id: SscrDv:0000040
-name: 9-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "2 month-old stage that refers to a pig which is over 63 days and under 71 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000047
+name: day 65 of fry stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: dedicated to PMID:32293070
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000017 ! 8-week-old stage (pig)
-relationship: part_of SscrDv:0000039 ! 2-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "10.0" xsd:float
-property_value: IAO:0000589 "9-week-old stage (pig)" xsd:string
-property_value: start_wpb "9.0" xsd:float
+relationship: part_of SsalDv:0000043 ! fry stage (salmon)
+relationship: preceded_by SsalDv:0000046 ! day 48 of fry stage (salmon)
[Term]
-id: SscrDv:0000041
-name: 10-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "2 month-old stage that refers to a pig which is over 70 days and under 78 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000048
+name: day 77 of fry stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: dedicated to PMID:32293070
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000040 ! 9-week-old stage (pig)
-relationship: part_of SscrDv:0000039 ! 2-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "11.0" xsd:float
-property_value: IAO:0000589 "10-week-old stage (pig)" xsd:string
-property_value: start_wpb "10.0" xsd:float
+relationship: part_of SsalDv:0000043 ! fry stage (salmon)
+relationship: preceded_by SsalDv:0000047 ! day 65 of fry stage (salmon)
[Term]
-id: SscrDv:0000042
-name: 11-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "2 month-old stage that refers to a pig which is over 77 days and under 85 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000049
+name: day 94 of fry stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: dedicated to PMID:32293070
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000041 ! 10-week-old stage (pig)
-relationship: part_of SscrDv:0000039 ! 2-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "12.0" xsd:float
-property_value: IAO:0000589 "11-week-old stage (pig)" xsd:string
-property_value: start_wpb "11.0" xsd:float
+relationship: part_of SsalDv:0000043 ! fry stage (salmon)
+relationship: preceded_by SsalDv:0000048 ! day 77 of fry stage (salmon)
[Term]
-id: SscrDv:0000043
-name: 3-month-old stage (pig)
-namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 3 and under 4 months old." [Bgee:curator]
+id: SsalDv:0000051
+name: parr stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: stage description from G.Gillard (https://github.com/garethgillard), months 6-9, 10-15 cm.
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000042 ! 11-week-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "4.0" xsd:float
-property_value: end_wpb "16.0" xsd:float
-property_value: IAO:0000589 "3-month-old stage (pig)" xsd:string
-property_value: start_mpb "3.0" xsd:float
-property_value: start_wpb "12.0" xsd:float
+relationship: part_of UBERON:0000112 ! sexually immature stage
+relationship: preceded_by SsalDv:0000043 ! fry stage (salmon)
[Term]
-id: SscrDv:0000044
-name: 12-week-old stage (pig)
-namespace: pig_developmental_stage
-def: "3 month-old stage that refers to a pig which is over 84 days and under 92 days old." [Bgee:curator]
-subset: granular_stage
+id: SsalDv:0000052
+name: smolt stage (salmon)
+namespace: atlantic_salmon_developmental_stage
+comment: stage description from G.Gillard (https://github.com/garethgillard), months 9-12, 10-20 cm.
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000042 ! 11-week-old stage (pig)
-relationship: part_of SscrDv:0000043 ! 3-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "13.0" xsd:float
-property_value: IAO:0000589 "12-week-old stage (pig)" xsd:string
-property_value: start_wpb "12.0" xsd:float
+relationship: part_of UBERON:0000112 ! sexually immature stage
+relationship: preceded_by SsalDv:0000051 ! parr stage (salmon)
[Term]
-id: SscrDv:0000045
-name: 13-week-old stage (pig)
+id: SscrDv:0000010
+name: 1-week-old stage (pig)
namespace: pig_developmental_stage
-def: "3 month-old stage that refers to a pig which is over 91 days and under 99 days old." [Bgee:curator]
-subset: granular_stage
+def: "Immature stage that refers to a pig which is over 1 and under 2 weeks old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000044 ! 12-week-old stage (pig)
-relationship: part_of SscrDv:0000043 ! 3-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "14.0" xsd:float
-property_value: IAO:0000589 "13-week-old stage (pig)" xsd:string
-property_value: start_wpb "13.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000078 ! 6-day-old stage (pig)
+relationship: part_of UBERON:0034920 ! infant stage
+property_value: end_wpb "2.0" xsd:float
+property_value: start_dpb "7.0" xsd:float
+property_value: start_wpb "1.0" xsd:float
[Term]
-id: SscrDv:0000046
-name: 14-week-old stage (pig)
+id: SscrDv:0000011
+name: 2-week-old stage (pig)
namespace: pig_developmental_stage
-def: "3 month-old stage that refers to a pig which is over 98 days and under 106 days old." [Bgee:curator]
-subset: granular_stage
+def: "Immature stage that refers to a pig which is over 2 and under 3 weeks old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000045 ! 13-week-old stage (pig)
-relationship: part_of SscrDv:0000043 ! 3-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "15.0" xsd:float
-property_value: IAO:0000589 "14-week-old stage (pig)" xsd:string
-property_value: start_wpb "14.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000010 ! 1-week-old stage (pig)
+relationship: part_of UBERON:0034920 ! infant stage
+property_value: end_wpb "3.0" xsd:float
+property_value: start_wpb "2.0" xsd:float
[Term]
-id: SscrDv:0000047
-name: 15-week-old stage (pig)
+id: SscrDv:0000012
+name: 3-week-old stage (pig)
namespace: pig_developmental_stage
-def: "3 month-old stage that refers to a pig which is over 105 days and under 113 days old." [Bgee:curator]
-subset: granular_stage
+def: "Immature stage that refers to a pig which is over 3 and under 4 weeks old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000046 ! 14-week-old stage (pig)
-relationship: part_of SscrDv:0000043 ! 3-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "16.0" xsd:float
-property_value: IAO:0000589 "15-week-old stage (pig)" xsd:string
-property_value: start_wpb "15.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000011 ! 2-week-old stage (pig)
+relationship: part_of UBERON:0034920 ! infant stage
+property_value: end_wpb "4.0" xsd:float
+property_value: start_dpb "21.0" xsd:float
+property_value: start_wpb "3.0" xsd:float
[Term]
-id: SscrDv:0000048
-name: 4-month-old stage (pig)
+id: SscrDv:0000013
+name: 4-week-old stage (pig)
namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 4 and under 5 months old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 4 and under 5 weeks old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000047 ! 15-week-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "5.0" xsd:float
-property_value: end_wpb "21.0" xsd:float
-property_value: IAO:0000589 "4-month-old stage (pig)" xsd:string
-property_value: start_mpb "4.0" xsd:float
-property_value: start_wpb "16.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000012 ! 3-week-old stage (pig)
+relationship: part_of UBERON:0034920 ! infant stage
+property_value: end_wpb "5.0" xsd:float
+property_value: start_wpb "4.0" xsd:float
[Term]
-id: SscrDv:0000049
-name: 16-week-old stage (pig)
+id: SscrDv:0000014
+name: 5-week-old stage (pig)
namespace: pig_developmental_stage
-def: "4 month-old stage that refers to a pig which is over 112 days and under 120 days old." [Bgee:curator]
-subset: granular_stage
+def: "Immature stage that refers to a pig which is over 5 and under 6 weeks old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000047 ! 15-week-old stage (pig)
-relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "17.0" xsd:float
-property_value: IAO:0000589 "16-week-old stage (pig)" xsd:string
-property_value: start_wpb "16.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000013 ! 4-week-old stage (pig)
+relationship: part_of UBERON:0034920 ! infant stage
+property_value: end_wpb "6.0" xsd:float
+property_value: start_wpb "5.0" xsd:float
[Term]
-id: SscrDv:0000050
-name: 17-week-old stage (pig)
+id: SscrDv:0000015
+name: 6-week-old stage (pig)
namespace: pig_developmental_stage
-def: "4 month-old stage that refers to a pig which is over 119 days and under 127 days old." [Bgee:curator]
-subset: granular_stage
+def: "Immature stage that refers to a pig which is over 6 and under 7 weeks old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000049 ! 16-week-old stage (pig)
-relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "18.0" xsd:float
-property_value: IAO:0000589 "17-week-old stage (pig)" xsd:string
-property_value: start_wpb "17.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000014 ! 5-week-old stage (pig)
+relationship: part_of UBERON:0034920 ! infant stage
+property_value: end_wpb "7.0" xsd:float
+property_value: start_wpb "6.0" xsd:float
[Term]
-id: SscrDv:0000051
-name: 18-week-old stage (pig)
+id: SscrDv:0000016
+name: 7-week-old stage (pig)
namespace: pig_developmental_stage
-def: "4 month-old stage that refers to a pig which is over 126 days and under 134 days old." [Bgee:curator]
-subset: granular_stage
+def: "Immature stage that refers to a pig which is over 7 and under 8 weeks old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000050 ! 17-week-old stage (pig)
-relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "19.0" xsd:float
-property_value: IAO:0000589 "18-week-old stage (pig)" xsd:string
-property_value: start_wpb "18.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000015 ! 6-week-old stage (pig)
+relationship: part_of UBERON:0034920 ! infant stage
+property_value: end_wpb "8.0" xsd:float
+property_value: start_wpb "7.0" xsd:float
[Term]
-id: SscrDv:0000052
-name: 19-week-old stage (pig)
+id: SscrDv:0000017
+name: 8-week-old stage (pig)
namespace: pig_developmental_stage
-def: "4 month-old stage that refers to a pig which is over 133 days and under 141 days old." [Bgee:curator]
+def: "2 month-old stage that refers to a pig which is over 56 days and under 64 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000051 ! 18-week-old stage (pig)
-relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "20.0" xsd:float
-property_value: IAO:0000589 "19-week-old stage (pig)" xsd:string
-property_value: start_wpb "19.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000016 ! 7-week-old stage (pig)
+relationship: part_of SscrDv:0000039 ! 2-month-old stage (pig)
+property_value: end_wpb "9.0" xsd:float
+property_value: start_wpb "8.0" xsd:float
[Term]
-id: SscrDv:0000053
-name: 20-week-old stage (pig)
+id: SscrDv:0000018
+name: 21-day-old stage (pig)
namespace: pig_developmental_stage
-def: "4 month-old stage that refers to a pig which is over 140 days and under 148 days old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 21 and under 22 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000052 ! 19-week-old stage (pig)
-relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "21.0" xsd:float
-property_value: IAO:0000589 "20-week-old stage (pig)" xsd:string
-property_value: start_wpb "20.0" xsd:float
+relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
+property_value: end_dpb "22.0" xsd:float
+property_value: start_dpb "21.0" xsd:float
+property_value: start_wpb "3.0" xsd:float
[Term]
-id: SscrDv:0000054
-name: 5-month-old stage (pig)
+id: SscrDv:0000019
+name: 22-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 5 and under 6 months old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 22 and under 23 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000053 ! 20-week-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "6.0" xsd:float
-property_value: end_wpb "25.0" xsd:float
-property_value: IAO:0000589 "5-month-old stage (pig)" xsd:string
-property_value: start_mpb "5.0" xsd:float
-property_value: start_wpb "21.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000018 ! 21-day-old stage (pig)
+relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
+property_value: end_dpb "23.0" xsd:float
+property_value: start_dpb "22.0" xsd:float
[Term]
-id: SscrDv:0000055
-name: 21-week-old stage (pig)
+id: SscrDv:0000020
+name: 23-day-old stage (pig)
namespace: pig_developmental_stage
-def: "5 month-old stage that refers to a pig which is over 147 days and under 155 days old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 23 and under 24 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000053 ! 20-week-old stage (pig)
-relationship: part_of SscrDv:0000054 ! 5-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "22.0" xsd:float
-property_value: IAO:0000589 "21-week-old stage (pig)" xsd:string
-property_value: start_wpb "21.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000019 ! 22-day-old stage (pig)
+relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
+property_value: end_dpb "24.0" xsd:float
+property_value: start_dpb "23.0" xsd:float
[Term]
-id: SscrDv:0000056
-name: 22-week-old stage (pig)
+id: SscrDv:0000021
+name: 24-day-old stage (pig)
namespace: pig_developmental_stage
-def: "5 month-old stage that refers to a pig which is over 154 days and under 162 days old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 24 and under 25 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000055 ! 21-week-old stage (pig)
-relationship: part_of SscrDv:0000054 ! 5-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "23.0" xsd:float
-property_value: IAO:0000589 "22-week-old stage (pig)" xsd:string
-property_value: start_wpb "22.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000020 ! 23-day-old stage (pig)
+relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
+property_value: end_dpb "25.0" xsd:float
+property_value: start_dpb "24.0" xsd:float
[Term]
-id: SscrDv:0000057
-name: 23-week-old stage (pig)
+id: SscrDv:0000022
+name: 25-day-old stage (pig)
namespace: pig_developmental_stage
-def: "5 month-old stage that refers to a pig which is over 161 days and under 169 days old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 25 and under 26 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000056 ! 22-week-old stage (pig)
-relationship: part_of SscrDv:0000054 ! 5-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "24.0" xsd:float
-property_value: IAO:0000589 "23-week-old stage (pig)" xsd:string
-property_value: start_wpb "23.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000021 ! 24-day-old stage (pig)
+relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
+property_value: end_dpb "26.0" xsd:float
+property_value: start_dpb "25.0" xsd:float
[Term]
-id: SscrDv:0000058
-name: 24-week-old stage (pig)
+id: SscrDv:0000023
+name: 26-day-old stage (pig)
namespace: pig_developmental_stage
-def: "5 month-old stage that refers to a pig which is over 168 days and under 176 days old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 26 and under 27 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000057 ! 23-week-old stage (pig)
-relationship: part_of SscrDv:0000054 ! 5-month-old stage (pig)
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_wpb "25.0" xsd:float
-property_value: IAO:0000589 "24-week-old stage (pig)" xsd:string
-property_value: start_wpb "24.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000022 ! 25-day-old stage (pig)
+relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
+property_value: end_dpb "27.0" xsd:float
+property_value: start_dpb "26.0" xsd:float
[Term]
-id: SscrDv:0000059
-name: 6-month-old stage (pig)
+id: SscrDv:0000024
+name: 27-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 6 and under 7 months old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 27 and under 28 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000058 ! 24-week-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "7.0" xsd:float
-property_value: IAO:0000589 "6-month-old stage (pig)" xsd:string
-property_value: start_mpb "6.0" xsd:float
-property_value: start_wpb "25.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000023 ! 26-day-old stage (pig)
+relationship: part_of SscrDv:0000012 ! 3-week-old stage (pig)
+property_value: end_dpb "28.0" xsd:float
+property_value: start_dpb "27.0" xsd:float
[Term]
-id: SscrDv:0000060
-name: 7-month-old stage (pig)
+id: SscrDv:0000025
+name: 28-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 7 and under 8 months old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 28 and under 29 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000059 ! 6-month-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "8.0" xsd:float
-property_value: IAO:0000589 "7-month-old stage (pig)" xsd:string
-property_value: start_mpb "7.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000024 ! 27-day-old stage (pig)
+relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
+property_value: end_dpb "29.0" xsd:float
+property_value: start_dpb "28.0" xsd:float
[Term]
-id: SscrDv:0000061
-name: 8-month-old stage (pig)
+id: SscrDv:0000026
+name: 29-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 8 and under 9 months old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 29 and under 30 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000060 ! 7-month-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "9.0" xsd:float
-property_value: IAO:0000589 "8-month-old stage (pig)" xsd:string
-property_value: start_mpb "8.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000025 ! 28-day-old stage (pig)
+relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
+property_value: end_dpb "30.0" xsd:float
+property_value: start_dpb "29.0" xsd:float
[Term]
-id: SscrDv:0000062
-name: 9-month-old stage (pig)
+id: SscrDv:0000027
+name: 30-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 9 and under 10 months old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 30 and under 31 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000061 ! 8-month-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "10.0" xsd:float
-property_value: IAO:0000589 "9-month-old stage (pig)" xsd:string
-property_value: start_mpb "9.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000026 ! 29-day-old stage (pig)
+relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
+property_value: end_dpb "31.0" xsd:float
+property_value: start_dpb "30.0" xsd:float
[Term]
-id: SscrDv:0000063
-name: 10-month-old stage (pig)
+id: SscrDv:0000028
+name: 31-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Juvenile stage that refers to a pig which is over 10 and under 11 months old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 31 and under 32 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000062 ! 9-month-old stage (pig)
-relationship: part_of UBERON:0034919 ! juvenile stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "11.0" xsd:float
-property_value: IAO:0000589 "10-month-old stage (pig)" xsd:string
-property_value: start_mpb "10.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000027 ! 30-day-old stage (pig)
+relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
+property_value: end_dpb "32.0" xsd:float
+property_value: start_dpb "31.0" xsd:float
[Term]
-id: SscrDv:0000064
-name: 11-month-old stage (pig)
+id: SscrDv:0000029
+name: 32-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Mature stage that refers to a pig which is over 11 and under 12 months old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 32 and under 33 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000063 ! 10-month-old stage (pig)
-relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "12.0" xsd:float
-property_value: IAO:0000589 "11-month-old stage (pig)" xsd:string
-property_value: start_mpb "11.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000028 ! 31-day-old stage (pig)
+relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
+property_value: end_dpb "33.0" xsd:float
+property_value: start_dpb "32.0" xsd:float
[Term]
-id: SscrDv:0000065
-name: 1-year-old stage (pig)
+id: SscrDv:0000030
+name: 33-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Mature stage that refers to a pig which is over 1 and under 2 years old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 33 and under 34 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000064 ! 11-month-old stage (pig)
-relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_mpb "24.0" xsd:float
-property_value: end_ypb "2.0" xsd:float
-property_value: IAO:0000589 "1-year-old stage (pig)" xsd:string
-property_value: start_mpb "12.0" xsd:float
-property_value: start_ypb "1.0" xsd:float
-
-[Term]
-id: SscrDv:0000066
-name: 2-year-old stage (pig)
+relationship: immediately_preceded_by SscrDv:0000029 ! 32-day-old stage (pig)
+relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
+property_value: end_dpb "34.0" xsd:float
+property_value: start_dpb "33.0" xsd:float
+
+[Term]
+id: SscrDv:0000031
+name: 34-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Mature stage that refers to a pig which is over 2 and under 3 years old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 34 and under 35 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000065 ! 1-year-old stage (pig)
-relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_ypb "3.0" xsd:float
-property_value: IAO:0000589 "2-year-old stage (pig)" xsd:string
-property_value: start_ypb "2.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000030 ! 33-day-old stage (pig)
+relationship: part_of SscrDv:0000013 ! 4-week-old stage (pig)
+property_value: end_dpb "35.0" xsd:float
+property_value: start_dpb "34.0" xsd:float
[Term]
-id: SscrDv:0000067
-name: 3-year-old stage (pig)
+id: SscrDv:0000032
+name: 35-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Mature stage that refers to a pig which is over 3 and under 4 years old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 35 and under 36 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000066 ! 2-year-old stage (pig)
-relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_ypb "4.0" xsd:float
-property_value: IAO:0000589 "3-year-old stage (pig)" xsd:string
-property_value: start_ypb "3.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000031 ! 34-day-old stage (pig)
+relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
+property_value: end_dpb "36.0" xsd:float
+property_value: start_dpb "35.0" xsd:float
[Term]
-id: SscrDv:0000068
-name: 4-year-old stage (pig)
+id: SscrDv:0000033
+name: 36-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Mature stage that refers to a pig which is over 4 and under 5 years old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 36 and under 37 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000067 ! 3-year-old stage (pig)
-relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_ypb "5.0" xsd:float
-property_value: IAO:0000589 "4-year-old stage (pig)" xsd:string
-property_value: start_ypb "4.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000032 ! 35-day-old stage (pig)
+relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
+property_value: end_dpb "37.0" xsd:float
+property_value: start_dpb "36.0" xsd:float
[Term]
-id: SscrDv:0000069
-name: 5-year-old stage (pig)
+id: SscrDv:0000034
+name: 37-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Mature stage that refers to a pig which is over 5 and under 6 years old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 37 and under 38 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000068 ! 4-year-old stage (pig)
-relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_ypb "6.0" xsd:float
-property_value: IAO:0000589 "5-year-old stage (pig)" xsd:string
-property_value: start_ypb "5.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000033 ! 36-day-old stage (pig)
+relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
+property_value: end_dpb "38.0" xsd:float
+property_value: start_dpb "37.0" xsd:float
[Term]
-id: SscrDv:0000070
-name: 6-year-old stage (pig)
+id: SscrDv:0000035
+name: 38-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Mature stage that refers to a pig which is over 6 and under 7 years old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 38 and under 39 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000069 ! 5-year-old stage (pig)
-relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_ypb "7.0" xsd:float
-property_value: IAO:0000589 "6-year-old stage (pig)" xsd:string
-property_value: start_ypb "6.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000034 ! 37-day-old stage (pig)
+relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
+property_value: end_dpb "39.0" xsd:float
+property_value: start_dpb "38.0" xsd:float
[Term]
-id: SscrDv:0000071
-name: 7-year-old stage (pig)
+id: SscrDv:0000036
+name: 39-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Mature stage that refers to a pig which is over 7 and under 8 years old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 39 and under 40 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000070 ! 6-year-old stage (pig)
-relationship: part_of UBERON:0018241 ! prime adult stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_ypb "8.0" xsd:float
-property_value: IAO:0000589 "7-year-old stage (pig)" xsd:string
-property_value: start_ypb "7.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000035 ! 38-day-old stage (pig)
+relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
+property_value: end_dpb "40.0" xsd:float
+property_value: start_dpb "39.0" xsd:float
[Term]
-id: SscrDv:0000072
-name: 0-day-old stage (pig)
+id: SscrDv:0000037
+name: 40-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Postnatal stage that refers to a new born pig which is under 24 hours old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 40 and under 41 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
-synonym: "newborn day 0" EXACT []
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by UBERON:0000068 ! embryo stage
-relationship: part_of UBERON:0007221 ! neonate stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "1.0" xsd:float
-property_value: IAO:0000589 "0-day-old stage (pig)" xsd:string
-property_value: start_dpb "0.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000036 ! 39-day-old stage (pig)
+relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
+property_value: end_dpb "41.0" xsd:float
+property_value: start_dpb "40.0" xsd:float
[Term]
-id: SscrDv:0000073
-name: 1-day-old stage (pig)
+id: SscrDv:0000038
+name: 41-day-old stage (pig)
namespace: pig_developmental_stage
-def: "Postnatal stage that refers to a pig which is over 1 and under 2 days old." [Bgee:curator]
+def: "Immature stage that refers to a pig which is over 41 and under 42 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000072 ! 0-day-old stage (pig)
-relationship: part_of UBERON:0007221 ! neonate stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "2.0" xsd:float
-property_value: IAO:0000589 "1-day-old stage (pig)" xsd:string
-property_value: start_dpb "1.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000037 ! 40-day-old stage (pig)
+relationship: part_of SscrDv:0000014 ! 5-week-old stage (pig)
+property_value: end_dpb "42.0" xsd:float
+property_value: start_dpb "41.0" xsd:float
[Term]
-id: SscrDv:0000074
-name: 2-day-old stage (pig)
+id: SscrDv:0000039
+name: 2-month-old stage (pig)
namespace: pig_developmental_stage
-def: "Postnatal stage that refers to a pig which is over 2 and under 3 days old." [Bgee:curator]
-subset: granular_stage
+def: "Juvenile stage that refers to a pig which is over 2 and under 3 months old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000073 ! 1-day-old stage (pig)
-relationship: part_of UBERON:0007221 ! neonate stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "3.0" xsd:float
-property_value: IAO:0000589 "2-day-old stage (pig)" xsd:string
-property_value: start_dpb "2.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000016 ! 7-week-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "3.0" xsd:float
+property_value: end_wpb "12.0" xsd:float
+property_value: start_mpb "2.0" xsd:float
+property_value: start_wpb "8.0" xsd:float
[Term]
-id: SscrDv:0000075
-name: 3-day-old stage (pig)
+id: SscrDv:0000040
+name: 9-week-old stage (pig)
namespace: pig_developmental_stage
-def: "Postnatal stage that refers to a pig which is over 3 and under 4 days old." [Bgee:curator]
+def: "2 month-old stage that refers to a pig which is over 63 days and under 71 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000074 ! 2-day-old stage (pig)
-relationship: part_of UBERON:0007221 ! neonate stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "4.0" xsd:float
-property_value: IAO:0000589 "3-day-old stage (pig)" xsd:string
-property_value: start_dpb "3.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000017 ! 8-week-old stage (pig)
+relationship: part_of SscrDv:0000039 ! 2-month-old stage (pig)
+property_value: end_wpb "10.0" xsd:float
+property_value: start_wpb "9.0" xsd:float
[Term]
-id: SscrDv:0000076
-name: 4-day-old stage (pig)
+id: SscrDv:0000041
+name: 10-week-old stage (pig)
namespace: pig_developmental_stage
-def: "Postnatal stage that refers to a pig which is over 4 and under 5 days old." [Bgee:curator]
+def: "2 month-old stage that refers to a pig which is over 70 days and under 78 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000075 ! 3-day-old stage (pig)
-relationship: part_of UBERON:0007221 ! neonate stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "5.0" xsd:float
-property_value: IAO:0000589 "4-day-old stage (pig)" xsd:string
-property_value: start_dpb "4.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000040 ! 9-week-old stage (pig)
+relationship: part_of SscrDv:0000039 ! 2-month-old stage (pig)
+property_value: end_wpb "11.0" xsd:float
+property_value: start_wpb "10.0" xsd:float
[Term]
-id: SscrDv:0000077
-name: 5-day-old stage (pig)
+id: SscrDv:0000042
+name: 11-week-old stage (pig)
namespace: pig_developmental_stage
-def: "Postnatal stage that refers to a pig which is over 5 and under 6 days old." [Bgee:curator]
+def: "2 month-old stage that refers to a pig which is over 77 days and under 85 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000076 ! 4-day-old stage (pig)
-relationship: part_of UBERON:0007221 ! neonate stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "6.0" xsd:float
-property_value: IAO:0000589 "5-day-old stage (pig)" xsd:string
-property_value: start_dpb "5.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000041 ! 10-week-old stage (pig)
+relationship: part_of SscrDv:0000039 ! 2-month-old stage (pig)
+property_value: end_wpb "12.0" xsd:float
+property_value: start_wpb "11.0" xsd:float
[Term]
-id: SscrDv:0000078
-name: 6-day-old stage (pig)
+id: SscrDv:0000043
+name: 3-month-old stage (pig)
namespace: pig_developmental_stage
-def: "Postnatal stage that refers to a pig which is over 6 and under 7 days old." [Bgee:curator]
-subset: granular_stage
+def: "Juvenile stage that refers to a pig which is over 3 and under 4 months old." [Bgee:curator]
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000077 ! 5-day-old stage (pig)
-relationship: part_of UBERON:0007221 ! neonate stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpb "7.0" xsd:float
-property_value: IAO:0000589 "6-day-old stage (pig)" xsd:string
-property_value: start_dpb "6.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000042 ! 11-week-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "4.0" xsd:float
+property_value: end_wpb "16.0" xsd:float
+property_value: start_mpb "3.0" xsd:float
+property_value: start_wpb "12.0" xsd:float
[Term]
-id: SscrDv:0000079
-name: early embryonic stage (pig)
+id: SscrDv:0000044
+name: 12-week-old stage (pig)
namespace: pig_developmental_stage
-def: "Prenatal stage that starts at fertilization time and ends at about days 45 of gestation, when fetal weight gain accelerates." [Bgee:curator]
-comment: We define pig early and late embryonic stages based on fetal growth (see https://www.ncbi.nlm.nih.gov/pubmed/15446468). Pig embryo begins to attach to the uterus on days 13–14 of pregnancy (see https://embryology.med.unsw.edu.au/embryology/index.php/Pig_Development#Normal_Stages). At that stage, this is a 6-somite pig embryo (see https://embryology.med.unsw.edu.au/embryology/index.php/Book_-_Embryology_of_the_Pig_5).
+def: "3 month-old stage that refers to a pig which is over 84 days and under 92 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000068 ! embryo stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: end_dpf "45.0" xsd:float
-property_value: IAO:0000589 "early embryonic stage (pig)" xsd:string
-property_value: start_dpf "0.0" xsd:float
+relationship: immediately_preceded_by SscrDv:0000042 ! 11-week-old stage (pig)
+relationship: part_of SscrDv:0000043 ! 3-month-old stage (pig)
+property_value: end_wpb "13.0" xsd:float
+property_value: start_wpb "12.0" xsd:float
[Term]
-id: SscrDv:0000081
-name: ridge limb stage (pig)
+id: SscrDv:0000045
+name: 13-week-old stage (pig)
namespace: pig_developmental_stage
-def: "Pig fetal stage when the developing limb begins to grow out from the flank." [Bgee:curator]
-comment: This stage is defined at embryonic day 20 during pig development (see https://www.ncbi.nlm.nih.gov//pubmed/28335721).
+def: "3 month-old stage that refers to a pig which is over 91 days and under 99 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: IAO:0000589 "ridge limb stage (pig)" xsd:string
+relationship: immediately_preceded_by SscrDv:0000044 ! 12-week-old stage (pig)
+relationship: part_of SscrDv:0000043 ! 3-month-old stage (pig)
+property_value: end_wpb "14.0" xsd:float
+property_value: start_wpb "13.0" xsd:float
[Term]
-id: SscrDv:0000082
-name: bud limb stage (pig)
+id: SscrDv:0000046
+name: 14-week-old stage (pig)
namespace: pig_developmental_stage
-def: "Pig fetal stage when the developing limb looks like a semicircle that is as long as it is wide." [Bgee:curator]
-comment: This stage is defined at embryonic day 22 during pig development (see https://www.ncbi.nlm.nih.gov//pubmed/28335721).
+def: "3 month-old stage that refers to a pig which is over 98 days and under 106 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000081 ! ridge limb stage (pig)
-relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: IAO:0000589 "bud limb stage (pig)" xsd:string
+relationship: immediately_preceded_by SscrDv:0000045 ! 13-week-old stage (pig)
+relationship: part_of SscrDv:0000043 ! 3-month-old stage (pig)
+property_value: end_wpb "15.0" xsd:float
+property_value: start_wpb "14.0" xsd:float
[Term]
-id: SscrDv:0000083
-name: paddle limb stage (pig)
+id: SscrDv:0000047
+name: 15-week-old stage (pig)
namespace: pig_developmental_stage
-def: "Pig fetal stage when the developing limb looks like a hand-plate." [Bgee:curator]
-comment: This stage is defined at embryonic day 26 during pig development (see https://www.ncbi.nlm.nih.gov//pubmed/28335721).
+def: "3 month-old stage that refers to a pig which is over 105 days and under 113 days old." [Bgee:curator]
subset: granular_stage
subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by SscrDv:0000082 ! bud limb stage (pig)
-relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: RO:0002160 NCBITaxon:9823 ! only in taxon Sus scrofa
-property_value: IAO:0000589 "paddle limb stage (pig)" xsd:string
+relationship: immediately_preceded_by SscrDv:0000046 ! 14-week-old stage (pig)
+relationship: part_of SscrDv:0000043 ! 3-month-old stage (pig)
+property_value: end_wpb "16.0" xsd:float
+property_value: start_wpb "15.0" xsd:float
[Term]
-id: UBERON:0000000
-name: processual entity
-namespace: uberon
-def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity]
-subset: common_anatomy
-subset: upper_level
-xref: BFO:0000003
-is_a: BFO:0000003 ! occurrent
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
+id: SscrDv:0000048
+name: 4-month-old stage (pig)
+namespace: pig_developmental_stage
+def: "Juvenile stage that refers to a pig which is over 4 and under 5 months old." [Bgee:curator]
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000047 ! 15-week-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "5.0" xsd:float
+property_value: end_wpb "21.0" xsd:float
+property_value: start_mpb "4.0" xsd:float
+property_value: start_wpb "16.0" xsd:float
[Term]
-id: UBERON:0000025
-name: tube
-namespace: uberon
-def: "Any hollow cylindrical anatomical structure containing a lumen through which substances are transported." [http://orcid.org/0000-0002-6601-2165]
-synonym: "anatomical tube" EXACT []
-synonym: "duct" NARROW []
-xref: galen:Tube
-is_a: UBERON:0004111 ! anatomical conduit
-intersection_of: UBERON:0004111 ! anatomical conduit
-intersection_of: has_quality PATO:0002299 ! tubular
-relationship: has_part UBERON:0013522 ! subdivision of tube
-relationship: has_quality PATO:0002299 ! tubular
-property_value: curator_notes "not every anatomical conduit is a tube - for example, a bone foramen is an opening in the bone, and there is no distinct separate tube structure. Tubes may transport large mixed objects (for example, a bolus of food in the digestive tube) or they may transport the secretions of a single gland (for example, gland ducts)" xsd:string
-property_value: has_relational_adjective "tubular" xsd:string
+id: SscrDv:0000049
+name: 16-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "4 month-old stage that refers to a pig which is over 112 days and under 120 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000047 ! 15-week-old stage (pig)
+relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
+property_value: end_wpb "17.0" xsd:float
+property_value: start_wpb "16.0" xsd:float
[Term]
-id: UBERON:0000058
-name: duct
-namespace: uberon
-def: "A tubular structure that transports secreted or excreted substances." [http://orcid.org/0000-0002-6601-2165, http://www.siumed.edu/~dking2/intro/glands.htm#ducts]
-subset: grouping_class
-synonym: "anatomical duct" EXACT []
-synonym: "ducts" RELATED OMO:0003004 [XAO:0004000]
-synonym: "exocrine duct" NARROW []
-synonym: "exocrine gland duct" NARROW []
-xref: AAO:0011123
-xref: FBbt:00100314 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:30320
-xref: galen:Duct
-xref: NCIT:C12948
-xref: SCTID:91726008
-xref: TAO:0005171
-xref: UMLS:C0687028 {source="ncithesaurus:Duct"}
-xref: Wikipedia:Duct_(anatomy)
-xref: XAO:0004000
-xref: ZFA:0005171
-is_a: UBERON:0000063 ! organ subunit
-relationship: conduit_for UBERON:0000463 ! organism substance
-relationship: has_part UBERON:0034969 ! epithelial layer of duct
-relationship: has_quality PATO:0002299 ! tubular
-property_value: external_definition "A tube shaped portion of tissue lined with epithelial cells that collects secretions and routes them to their destination[ZFA:0005171]." xsd:string {source="ZFA:0005171"}
-property_value: external_ontology_notes "Most ducts, but not all, are exocrine gland ducts. Some ontologies classify structures such as the oviduct here." xsd:string
+id: SscrDv:0000050
+name: 17-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "4 month-old stage that refers to a pig which is over 119 days and under 127 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000049 ! 16-week-old stage (pig)
+relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
+property_value: end_wpb "18.0" xsd:float
+property_value: start_wpb "17.0" xsd:float
[Term]
-id: UBERON:0000060
-name: anatomical wall
-namespace: uberon
-alt_id: UBERON:0009915
-def: "Organ component adjacent to an organ cavity and which consists of a maximal aggregate of organ component layers." [FMA:82482]
-subset: upper_level
-synonym: "organ wall" RELATED [FMA:82482]
-synonym: "wall" BROAD []
-synonym: "wall of organ" EXACT [FMA:82482]
-xref: FMA:82482
-xref: galen:Wall
-is_a: UBERON:0000064 ! organ part
-relationship: adjacent_to UBERON:0002553 ! anatomical cavity
-relationship: has_part UBERON:0004923 ! organ component layer
-property_value: external_ontology_notes "in FMA, serosa is a wall" xsd:string {external_ontology="FMA"}
+id: SscrDv:0000051
+name: 18-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "4 month-old stage that refers to a pig which is over 126 days and under 134 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000050 ! 17-week-old stage (pig)
+relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
+property_value: end_wpb "19.0" xsd:float
+property_value: start_wpb "18.0" xsd:float
[Term]
-id: UBERON:0000061
-name: anatomical structure
-namespace: uberon
-def: "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome." [CARO:0000003]
-subset: common_anatomy
-subset: upper_level
-synonym: "biological structure" EXACT []
-synonym: "connected biological structure" EXACT [CARO:0000003]
-xref: AAO:0010825
-xref: AEO:0000003
-xref: BILA:0000003
-xref: CARO:0000003
-xref: EHDAA2:0003003
-xref: EMAPA:0
-xref: FBbt:00007001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:305751
-xref: FMA:67135
-xref: GAID:781
-xref: HAO:0000003
-xref: http://dbpedia.org/ontology/AnatomicalStructure
-xref: MA:0003000
-xref: MESH:D000825
-xref: SCTID:362889002
-xref: TAO:0000037
-xref: TGMA:0001823
-xref: VHOG:0001759
-xref: XAO:0003000
-xref: ZFA:0000037
-is_a: UBERON:0000465 ! material anatomical entity
-relationship: existence_ends_during_or_before UBERON:0000071 ! death stage
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: IAO:0000589 "anatomical structure (AEO)" xsd:string
+id: SscrDv:0000052
+name: 19-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "4 month-old stage that refers to a pig which is over 133 days and under 141 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000051 ! 18-week-old stage (pig)
+relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
+property_value: end_wpb "20.0" xsd:float
+property_value: start_wpb "19.0" xsd:float
[Term]
-id: UBERON:0000062
-name: organ
-namespace: uberon
-def: "Anatomical structure that performs a specific function or group of functions [WP]." [Wikipedia:Organ_(anatomy)]
-subset: common_anatomy
-subset: upper_level
-synonym: "anatomical unit" RELATED []
-synonym: "body organ" RELATED []
-synonym: "element" RELATED [http://orcid.org/0000-0002-6601-2165]
-xref: BIRNLEX:4
-xref: CARO:0020004
-xref: EFO:0000634
-xref: EMAPA:35949
-xref: ENVO:01000162
-xref: FMA:67498
-xref: MA:0003001
-xref: NCIT:C13018
-xref: SCTID:272625005
-xref: UMLS:C0178784 {source="ncithesaurus:Organ"}
-xref: WBbt:0003760
-xref: Wikipedia:Organ_(anatomy)
-is_a: UBERON:0010000 ! multicellular anatomical structure
-relationship: capable_of GO:0008150 ! biological_process
-relationship: has_boundary UBERON:0006984 ! anatomical surface
-relationship: never_in_taxon NCBITaxon:110815 {source="Wikipedia"}
-relationship: part_of UBERON:0000467 ! anatomical system
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: external_definition "Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions." xsd:string {source="GO:0048513"}
-property_value: external_ontology_notes "CARO v1 does not include a generic 'organ' class, only simple and compound organ. CARO v2 may include organ, see https://github.com/obophenotype/caro/issues/4" xsd:string
+id: SscrDv:0000053
+name: 20-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "4 month-old stage that refers to a pig which is over 140 days and under 148 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000052 ! 19-week-old stage (pig)
+relationship: part_of SscrDv:0000048 ! 4-month-old stage (pig)
+property_value: end_wpb "21.0" xsd:float
+property_value: start_wpb "20.0" xsd:float
[Term]
-id: UBERON:0000063
-name: organ subunit
-namespace: uberon
-def: "A part of an organ that constitutes a distinct modular sub-unit. In some cases, the organ may also contain other sub-units of identical or similar types, in other cases this may be a distinct entity." [http://orcid.org/0000-0002-6601-2165]
-subset: upper_level
-synonym: "organ region with fixed fiat boundary" RELATED [FMA:86140]
-synonym: "organ segment" RELATED [FMA:86140]
-synonym: "segment of organ" RELATED [FMA:86140]
-xref: FMA:86140
-is_a: UBERON:0000064 ! organ part
-property_value: editor_note "FMA distinguishes segment from zone by whether the fiat boundaries are fixed/anchored (segments) or floating (zone). It's not completely clear how to apply this distinction" xsd:string
-property_value: external_definition "Organ region with one or more anchored fiat boundaries. Examples: artery, trunk of nerve, cervical part of esophagus, pelvic part of vagina, horn of thyroid cartilage, anterior segment of eyeball." xsd:string {source="FMA:86140", version="3"}
-property_value: external_definition "Organ region with one or more fixed or anchored fiat boundaries. Examples: artery, trunk of nerve, cervical part of esophagus, pelvic part of vagina, horn of thyroid cartilage, anterior segment of eyebal." xsd:string {source="FMA:86140", version="1"}
+id: SscrDv:0000054
+name: 5-month-old stage (pig)
+namespace: pig_developmental_stage
+def: "Juvenile stage that refers to a pig which is over 5 and under 6 months old." [Bgee:curator]
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000053 ! 20-week-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "6.0" xsd:float
+property_value: end_wpb "25.0" xsd:float
+property_value: start_mpb "5.0" xsd:float
+property_value: start_wpb "21.0" xsd:float
[Term]
-id: UBERON:0000064
-name: organ part
-namespace: uberon
-def: "A multicellular structure that is a part of an organ." [http://orcid.org/0000-0002-6601-2165]
-subset: common_anatomy
-subset: efo_slim
-subset: non_informative
-subset: upper_level
-synonym: "cardinal organ part" EXACT [FMA:82472]
-synonym: "regional part of organ" RELATED [BIRNLEX:16]
-xref: AAO:0011124
-xref: BIRNLEX:16
-xref: EFO:0000635
-xref: FMA:82472
-xref: SCTID:113343008
-xref: SCTID:91717005
-is_a: UBERON:0010000 ! multicellular anatomical structure
-relationship: part_of UBERON:0000062 ! organ
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: curator_notes "currently defined in a very broad sense, may be replaced by more specific classes in the future" xsd:string
+id: SscrDv:0000055
+name: 21-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "5 month-old stage that refers to a pig which is over 147 days and under 155 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000053 ! 20-week-old stage (pig)
+relationship: part_of SscrDv:0000054 ! 5-month-old stage (pig)
+property_value: end_wpb "22.0" xsd:float
+property_value: start_wpb "21.0" xsd:float
[Term]
-id: UBERON:0000066
-name: fully formed stage
-namespace: uberon
-def: "The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both sexually immature stage, and adult stage." [https://orcid.org/0000-0002-6601-2165]
-subset: efo_slim
-subset: life_stage
-synonym: "adult stage" BROAD []
-synonym: "fully formed animal stage" EXACT []
-synonym: "juvenile-adult stage" EXACT []
-xref: BilaDO:0000004
-xref: BTO:0001043
-xref: EFO:0001272
-xref: FBdv:00005369
-xref: WBls:0000041
-xref: XtroDO:0000084
+id: SscrDv:0000056
+name: 22-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "5 month-old stage that refers to a pig which is over 154 days and under 162 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000092 ! post-embryonic stage
-relationship: preceded_by UBERON:0000111 ! organogenesis stage
-relationship: precedes UBERON:0000071 ! death stage
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/566" xsd:anyURI
+relationship: immediately_preceded_by SscrDv:0000055 ! 21-week-old stage (pig)
+relationship: part_of SscrDv:0000054 ! 5-month-old stage (pig)
+property_value: end_wpb "23.0" xsd:float
+property_value: start_wpb "22.0" xsd:float
[Term]
-id: UBERON:0000068
-name: embryo stage
-namespace: uberon
-def: "A life cycle stage that starts with fertilization and ends with the fully formed embryo." [http://orcid.org/0000-0002-6601-2165]
+id: SscrDv:0000057
+name: 23-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "5 month-old stage that refers to a pig which is over 161 days and under 169 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-synonym: "embryogenesis" RELATED []
-synonym: "embryonic stage" EXACT []
-xref: BilaDO:0000002
-xref: EV:0300001
-xref: FBdv:00005289
-xref: FMA:72652
-xref: HsapDv:0000002
-xref: MmusDv:0000002
-xref: OGES:000000
-xref: OGES:000022
-xref: SCTID:296280003
-xref: WBls:0000003
-xref: WBls:0000092
-xref: WBls:0000102
-xref: XAO:1000012
is_a: UBERON:0000105 ! life cycle stage
-relationship: precedes UBERON:0000066 ! fully formed stage
-relationship: precedes UBERON:0000092 ! post-embryonic stage
-relationship: simultaneous_with GO:0009790 ! embryo development
+relationship: immediately_preceded_by SscrDv:0000056 ! 22-week-old stage (pig)
+relationship: part_of SscrDv:0000054 ! 5-month-old stage (pig)
+property_value: end_wpb "24.0" xsd:float
+property_value: start_wpb "23.0" xsd:float
[Term]
-id: UBERON:0000069
-name: larval stage
-namespace: uberon
-def: "A distinct juvenile stage many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle." [Wikipedia:Larva]
-subset: efo_slim
+id: SscrDv:0000058
+name: 24-week-old stage (pig)
+namespace: pig_developmental_stage
+def: "5 month-old stage that refers to a pig which is over 168 days and under 176 days old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-synonym: "ammocoete" NARROW SENSU [Wikipedia:Larva]
-synonym: "ammocoete stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "bipinnaria" NARROW SENSU [Wikipedia:Larva]
-synonym: "bipinnaria stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "caterpillar" NARROW SENSU [Wikipedia:Larva]
-synonym: "caterpillar stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "glochidium" NARROW SENSU [Wikipedia:Larva]
-synonym: "glochidium stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "grub" NARROW SENSU [Wikipedia:Larva]
-synonym: "grub stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "larva" RELATED []
-synonym: "larva stage" EXACT []
-synonym: "leptocephalus" NARROW SENSU [Wikipedia:Larva]
-synonym: "leptocephalus stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "maggot" NARROW SENSU [Wikipedia:Larva]
-synonym: "maggot stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "metacestode" NARROW SENSU [BTO:0000859]
-synonym: "naiad, nymph" NARROW SENSU [Wikipedia:Larva]
-synonym: "naiad, nymph stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "nauplius" NARROW SENSU [Wikipedia:Larva]
-synonym: "nauplius stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "nymph" NARROW SENSU [Wikipedia:Larva]
-synonym: "nymph stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "planula" NARROW SENSU [Wikipedia:Larva]
-synonym: "planula stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "tornaria" NARROW SENSU [NCBITaxon:10219]
-synonym: "trochophore" NARROW SENSU [Wikipedia:Larva]
-synonym: "trochophore stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "veliger" NARROW SENSU [Wikipedia:Larva]
-synonym: "veliger stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "wriggler" NARROW SENSU [Wikipedia:Larva]
-synonym: "wriggler stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "zoea" NARROW SENSU [Wikipedia:Larva]
-synonym: "zoea stage" NARROW SENSU [Wikipedia:Larva]
-xref: BTO:0000915
-xref: BTO:0000954
-xref: EFO:0001303
-xref: MIAA:0000400
-xref: OGES:000008
-xref: Wikipedia:Larva
-xref: ZFS:0000048
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by UBERON:0000068 ! embryo stage
-relationship: never_in_taxon NCBITaxon:32524 ! Amniota
-relationship: part_of UBERON:0000092 ! post-embryonic stage
-relationship: simultaneous_with GO:0002164 ! larval development
-property_value: curator_notes "Uberon includes clade-specific subclasses, e.g. nematod larva" xsd:string
-property_value: taxon_notes "It is a misunderstanding that the larval form always reflects the group's evolutionary history. It could be the case, but often the larval stage has evolved secondarily, as in insects. In these cases the larval form might differ more from the group's common origin than the adult form" xsd:string {source="WP"}
+relationship: immediately_preceded_by SscrDv:0000057 ! 23-week-old stage (pig)
+relationship: part_of SscrDv:0000054 ! 5-month-old stage (pig)
+property_value: end_wpb "25.0" xsd:float
+property_value: start_wpb "24.0" xsd:float
[Term]
-id: UBERON:0000070
-name: pupal stage
-namespace: uberon
-def: "A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis." [https://github.com/obophenotype/uberon/issues/562, Wikipedia:Pupa]
+id: SscrDv:0000059
+name: 6-month-old stage (pig)
+namespace: pig_developmental_stage
+def: "Juvenile stage that refers to a pig which is over 6 and under 7 months old." [Bgee:curator]
subset: life_stage
-synonym: "aurelia stage" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
-synonym: "chrysalides stage" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
-synonym: "chrysalis stage" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
-synonym: "pupa stage" EXACT []
-xref: FBdv:00005349
-xref: Wikipedia:Pupa
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by UBERON:0000069 ! larval stage
-relationship: in_taxon NCBITaxon:33392 ! Endopterygota
-relationship: part_of UBERON:0000092 ! post-embryonic stage
-relationship: simultaneous_with GO:0035209 {notes="may be better to model pupal development as including the pre-pupal stage"} ! pupal development
-property_value: dc:contributor https://github.com/ANiknejad
-property_value: dc:contributor https://github.com/cmungall
-property_value: dc:contributor https://github.com/dosumis
-property_value: dc:contributor https://github.com/fbastian
-property_value: dc:contributor https://github.com/mmc46
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/562" xsd:anyURI
-property_value: taxon_notes "The pupal stage is found only in holometabolous insects, those that undergo a complete metamorphosis, going through four life stages; embryo, larva, pupa and imago" xsd:string
+relationship: immediately_preceded_by SscrDv:0000058 ! 24-week-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "7.0" xsd:float
+property_value: start_mpb "6.0" xsd:float
+property_value: start_wpb "25.0" xsd:float
[Term]
-id: UBERON:0000071
-name: death stage
-namespace: uberon
-def: "End of the life of an organism." [XAO:0000437]
-subset: common_anatomy
+id: SscrDv:0000060
+name: 7-month-old stage (pig)
+namespace: pig_developmental_stage
+def: "Juvenile stage that refers to a pig which is over 7 and under 8 months old." [Bgee:curator]
subset: life_stage
-synonym: "death" RELATED []
-xref: XAO:0000437
-xref: XtroDO:0000085
is_a: UBERON:0000105 ! life cycle stage
-relationship: ends UBERON:0000104 ! life cycle
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: external_ontology_notes "ncit:Death is an outcome" xsd:string {external_ontology="ncit"}
+relationship: immediately_preceded_by SscrDv:0000059 ! 6-month-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "8.0" xsd:float
+property_value: start_mpb "7.0" xsd:float
[Term]
-id: UBERON:0000075
-name: subdivision of skeletal system
-namespace: uberon
-alt_id: UBERON:0010322
-def: "Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003]
-subset: non_informative
-synonym: "skeletal system part" RELATED []
-synonym: "skeletal system subdivision" EXACT [FMA:85544]
-xref: FMA:85544
-xref: galen:ComplexSkeletalStructure
-xref: NCIT:C34076
-xref: SCTID:118966000
-xref: UMLS:C1519343 {source="ncithesaurus:Skeletal_System_Part"}
-is_a: UBERON:0011216 {source="cjm"} ! organ system subdivision
-relationship: composed_primarily_of UBERON:0004765 ! skeletal element
-relationship: in_taxon NCBITaxon:7711 ! Chordata
-relationship: part_of UBERON:0001434 ! skeletal system
+id: SscrDv:0000061
+name: 8-month-old stage (pig)
+namespace: pig_developmental_stage
+def: "Juvenile stage that refers to a pig which is over 8 and under 9 months old." [Bgee:curator]
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000060 ! 7-month-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "9.0" xsd:float
+property_value: start_mpb "8.0" xsd:float
[Term]
-id: UBERON:0000092
-name: post-embryonic stage
-namespace: uberon
-def: "Stage succeeding embryo, including mature structure." [https://orcid.org/0000-0002-6601-2165]
+id: SscrDv:0000062
+name: 9-month-old stage (pig)
+namespace: pig_developmental_stage
+def: "Juvenile stage that refers to a pig which is over 9 and under 10 months old." [Bgee:curator]
subset: life_stage
-synonym: "post-hatching stage" NARROW []
-synonym: "postembryonic" RELATED []
-synonym: "postembryonic stage" EXACT []
-xref: BilaDO:0000003
-xref: OGES:000010
-xref: OGES:000014
-xref: OGES:000024
-xref: WBls:0000022
-xref: WBls:0000093
-xref: WBls:0000103
is_a: UBERON:0000105 ! life cycle stage
-relationship: preceded_by UBERON:0000068 ! embryo stage
-relationship: simultaneous_with GO:0009791 ! post-embryonic development
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/344" xsd:anyURI
-property_value: taxon_notes "In birds, the postnatal stage begins when the beak penetrates the shell (i.e., external pipping) (Brown et al. 1997)" xsd:string
+relationship: immediately_preceded_by SscrDv:0000061 ! 8-month-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "10.0" xsd:float
+property_value: start_mpb "9.0" xsd:float
[Term]
-id: UBERON:0000104
-name: life cycle
-namespace: uberon
-def: "An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism." [https://orcid.org/0000-0002-6601-2165]
-subset: common_anatomy
-subset: upper_level
-synonym: "entire life cycle" EXACT []
-synonym: "entire lifespan" EXACT []
-synonym: "life" EXACT []
-synonym: "lifespan" EXACT []
-xref: FBdv:00000000
-xref: HsapDv:0000001
-xref: MmusDv:0000001
-xref: ncithesaurus:Life
-xref: OGES:000011
-is_a: UBERON:0000000 ! processual entity
-relationship: ends_with UBERON:0000071 ! death stage
-relationship: has_part UBERON:0000105 ! life cycle stage
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/532" xsd:anyURI
+id: SscrDv:0000063
+name: 10-month-old stage (pig)
+namespace: pig_developmental_stage
+def: "Juvenile stage that refers to a pig which is over 10 and under 11 months old." [Bgee:curator]
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000062 ! 9-month-old stage (pig)
+relationship: part_of UBERON:0034919 ! juvenile stage
+property_value: end_mpb "11.0" xsd:float
+property_value: start_mpb "10.0" xsd:float
[Term]
-id: UBERON:0000105
-name: life cycle stage
-namespace: uberon
-def: "A spatiotemporal region encompassing some part of the life cycle of an organism." [https://orcid.org/0000-0002-6601-2165]
-subset: common_anatomy
-subset: efo_slim
+id: SscrDv:0000064
+name: 11-month-old stage (pig)
+namespace: pig_developmental_stage
+def: "Mature stage that refers to a pig which is over 11 and under 12 months old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-subset: upper_level
-synonym: "developmental stage" NARROW []
-synonym: "stage" NARROW []
-xref: BILS:0000105
-xref: EFO:0000399
-xref: FBdv:00007012
-xref: FMA:24120
-xref: HsapDv:0000000
-xref: MESH:D008018
-xref: MmusDv:0000000
-xref: ncithesaurus:Developmental_Stage
-xref: OlatDv:0000010
-xref: PdumDv:0000090
-xref: WBls:0000002
-xref: XAO:1000000
-xref: ZFS:0000000
-xref: ZFS:0100000
-is_a: UBERON:0000000 ! processual entity
-relationship: part_of UBERON:0000104 ! life cycle
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: editor_note "this class represents a proper part of the life cycle of an organism. The class 'life cycle' should not be placed here" xsd:string
-property_value: external_ontology_notes "the WBls class 'all stages' belongs here as it is the superclass of other WBls stages" xsd:string
-property_value: external_ontology_notes "we map the ZFS unknown stage here as it is logically equivalent to saying *some* life cycle stage" xsd:string
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000063 ! 10-month-old stage (pig)
+relationship: part_of UBERON:0018241 ! prime adult stage
+property_value: end_mpb "12.0" xsd:float
+property_value: start_mpb "11.0" xsd:float
[Term]
-id: UBERON:0000106
-name: zygote stage
-namespace: uberon
-def: "A stage at which the organism is a single cell produced by means of sexual reproduction." [Wikipedia:Zygote]
-subset: efo_slim
+id: SscrDv:0000065
+name: 1-year-old stage (pig)
+namespace: pig_developmental_stage
+def: "Mature stage that refers to a pig which is over 1 and under 2 years old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-synonym: "1-cell stage" EXACT []
-synonym: "fertilized egg stage" EXACT [BTO:0000854]
-synonym: "fertilized egg stage" RELATED []
-synonym: "one cell stage" EXACT []
-synonym: "one-cell stage" RELATED [VHOG:0000745]
-synonym: "zygote" RELATED [VHOG:0000745]
-synonym: "zygotum" RELATED OMO:0003011 [Wikipedia:Zygote]
-xref: BilaDO:0000005
-xref: BILS:0000106
-xref: EFO:0001322
-xref: EHDAA:27
-xref: FBdv:00005288
-xref: IDOMAL:0000302 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0003-4423-4370", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
-xref: NCIT:C12601
-xref: PdumDv:0000100
-xref: VHOG:0000745
-xref: Wikipedia:Zygote
-xref: XAO:1000001
-xref: ZFS:0000001
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000068 ! embryo stage
-relationship: seeAlso EMAPA:16033
-relationship: starts UBERON:0000104 ! life cycle
-property_value: homology_notes "As in all metazoans, eumetazoan development begins with a fertilized egg, or zygote.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000745", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.107", source="http://bgee.unil.ch/"}
+relationship: immediately_preceded_by SscrDv:0000064 ! 11-month-old stage (pig)
+relationship: part_of UBERON:0018241 ! prime adult stage
+property_value: end_mpb "24.0" xsd:float
+property_value: end_ypb "2.0" xsd:float
+property_value: start_mpb "12.0" xsd:float
+property_value: start_ypb "1.0" xsd:float
[Term]
-id: UBERON:0000107
-name: cleavage stage
-namespace: uberon
-def: "The first few specialized divisions of an activated animal egg; Stage consisting of division of cells in the early embryo. The zygotes of many species undergo rapid cell cycles with no significant growth, producing a cluster of cells the same size as the original zygote. The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula." [GO:0040016, Wikipedia:Cleavage_(embryo)]
-subset: efo_slim
+id: SscrDv:0000066
+name: 2-year-old stage (pig)
+namespace: pig_developmental_stage
+def: "Mature stage that refers to a pig which is over 2 and under 3 years old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-xref: BilaDO:0000006
-xref: BILS:0000107
-xref: EFO:0001290
-xref: FBdv:00000054
-xref: MESH:D002970
-xref: MmusDv:0000004
-xref: OGES:000015
-xref: OGES:000020
-xref: PdumDv:0000200
-xref: Wikipedia:Cleavage_(embryo)
-xref: XAO:1000004
-xref: ZFS:0000046
is_a: UBERON:0000105 ! life cycle stage
-intersection_of: UBERON:0000105 ! life cycle stage
-intersection_of: simultaneous_with GO:0040016 ! embryonic cleavage
-relationship: immediately_preceded_by UBERON:0000106 ! zygote stage
-relationship: part_of UBERON:0000068 ! embryo stage
-relationship: simultaneous_with GO:0040016 ! embryonic cleavage
+relationship: immediately_preceded_by SscrDv:0000065 ! 1-year-old stage (pig)
+relationship: part_of UBERON:0018241 ! prime adult stage
+property_value: end_ypb "3.0" xsd:float
+property_value: start_ypb "2.0" xsd:float
[Term]
-id: UBERON:0000108
-name: blastula stage
-namespace: uberon
-def: "An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence." [Wikipedia:Blastula]
-subset: efo_slim
+id: SscrDv:0000067
+name: 3-year-old stage (pig)
+namespace: pig_developmental_stage
+def: "Mature stage that refers to a pig which is over 3 and under 4 years old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-xref: BilaDO:0000007
-xref: BILS:0000108
-xref: EFO:0001282
-xref: HsapDv:0000006
-xref: MmusDv:0000007
-xref: OGES:000003
-xref: OGES:000016
-xref: OGES:000021
-xref: WBls:0000005
-xref: Wikipedia:Blastula
-xref: XAO:1000003
-xref: ZFS:0000045
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000068 ! embryo stage
-relationship: preceded_by UBERON:0000107 ! cleavage stage
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png" xsd:anyURI
-property_value: editor_note "consider adding a preceding stage 'morula stage' as part of cleavage" xsd:string
+relationship: immediately_preceded_by SscrDv:0000066 ! 2-year-old stage (pig)
+relationship: part_of UBERON:0018241 ! prime adult stage
+property_value: end_ypb "4.0" xsd:float
+property_value: start_ypb "3.0" xsd:float
[Term]
-id: UBERON:0000109
-name: gastrula stage
-namespace: uberon
-def: "A stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm." [GO:0007369]
-subset: efo_slim
+id: SscrDv:0000068
+name: 4-year-old stage (pig)
+namespace: pig_developmental_stage
+def: "Mature stage that refers to a pig which is over 4 and under 5 years old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-synonym: "blastocystis trilaminaris stage" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar blastocyst stage" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar blastoderm stage" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar disk stage" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar germ stage" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar stage" RELATED [https://orcid.org/0000-0002-6601-2165]
-xref: BilaDO:0000008
-xref: BILS:0000109
-xref: EFO:0001296
-xref: FBdv:00005317
-xref: HsapDv:0000010
-xref: MmusDv:0000013
-xref: OGES:000004
-xref: OGES:000019
-xref: WBls:0000010
-xref: XAO:1000005
-xref: ZFS:0000047
is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0000068 ! embryo stage
-relationship: preceded_by UBERON:0000108 {source="BILS"} ! blastula stage
-relationship: simultaneous_with GO:0007369 ! gastrulation
+relationship: immediately_preceded_by SscrDv:0000067 ! 3-year-old stage (pig)
+relationship: part_of UBERON:0018241 ! prime adult stage
+property_value: end_ypb "5.0" xsd:float
+property_value: start_ypb "4.0" xsd:float
[Term]
-id: UBERON:0000110
-name: neurula stage
-namespace: uberon
-def: "Staged defined by the formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system." [GO:0001841]
+id: SscrDv:0000069
+name: 5-year-old stage (pig)
+namespace: pig_developmental_stage
+def: "Mature stage that refers to a pig which is over 5 and under 6 years old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-xref: BilaDO:0000009
-xref: BILS:0000110
-xref: HsapDv:0000012
-xref: MmusDv:0000017
-xref: XAO:1000006
is_a: UBERON:0000105 ! life cycle stage
-relationship: dubious_for_taxon NCBITaxon:7955
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0000068 ! embryo stage
-relationship: preceded_by UBERON:0000109 ! gastrula stage
-relationship: simultaneous_with GO:0001841 ! neural tube formation
-property_value: seeAlso "https://github.com/obophenotype/developmental-stage-ontologies/issues/84" xsd:anyURI
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/343" xsd:anyURI
-property_value: taxon_notes "In zebrafish, the times of neurulation and segmentation overlap so extensively there is no distinct neurula period of development, such as occurs largely before segmentation in amphibian embryos." xsd:string
+relationship: immediately_preceded_by SscrDv:0000068 ! 4-year-old stage (pig)
+relationship: part_of UBERON:0018241 ! prime adult stage
+property_value: end_ypb "6.0" xsd:float
+property_value: start_ypb "5.0" xsd:float
[Term]
-id: UBERON:0000111
-name: organogenesis stage
-namespace: uberon
-def: "A stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism." [Wikipedia:Organogenesis]
+id: SscrDv:0000070
+name: 6-year-old stage (pig)
+namespace: pig_developmental_stage
+def: "Mature stage that refers to a pig which is over 6 and under 7 years old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-synonym: "segmentation stage" RELATED []
-xref: BilaDO:0000010
-xref: BILS:0000111
-xref: HsapDv:0000015
-xref: MmusDv:0000018
-xref: OGES:000005
-xref: OGES:000032
-xref: Wikipedia:Organogenesis
is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0000068 ! embryo stage
-relationship: simultaneous_with GO:0048513 ! animal organ development
-property_value: seeAlso "https://github.com/obophenotype/developmental-stage-ontologies/issues/84" xsd:anyURI
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/533" xsd:anyURI
+relationship: immediately_preceded_by SscrDv:0000069 ! 5-year-old stage (pig)
+relationship: part_of UBERON:0018241 ! prime adult stage
+property_value: end_ypb "7.0" xsd:float
+property_value: start_ypb "6.0" xsd:float
[Term]
-id: UBERON:0000112
-name: sexually immature stage
-namespace: uberon
-subset: efo_slim
+id: SscrDv:0000071
+name: 7-year-old stage (pig)
+namespace: pig_developmental_stage
+def: "Mature stage that refers to a pig which is over 7 and under 8 years old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-synonym: "immature stage" EXACT [VHOG:FB]
-synonym: "juvenile stage" NARROW [XAO:1000010]
-synonym: "subadult stage" RELATED [http://eol.org/schema/terms/subadult]
-xref: BILS:0000112
-xref: BTO:0002168
-xref: EFO:0001300
-xref: EV:0300051
-xref: MmusDv:0000043
-xref: OGES:000009
-xref: XAO:1000010
-xref: XtroDO:0000083
-xref: ZFS:0000051
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000066 ! fully formed stage
-property_value: external_definition "The stage of being a sexually immature adult animal[XAO:1000010]." xsd:string {source="XAO:1000010"}
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/427" xsd:anyURI
-property_value: taxon_notes "In mammals this would include infant (nourishment from lactation) and juvenile (prepubertal no longer dependent on mother)" xsd:string
+relationship: immediately_preceded_by SscrDv:0000070 ! 6-year-old stage (pig)
+relationship: part_of UBERON:0018241 ! prime adult stage
+property_value: end_ypb "8.0" xsd:float
+property_value: start_ypb "7.0" xsd:float
[Term]
-id: UBERON:0000113
-name: post-juvenile adult stage
-namespace: uberon
-def: "The stage of being a sexually mature adult animal." [https://orcid.org/0000-0002-6601-2165]
+id: SscrDv:0000072
+name: 0-day-old stage (pig)
+namespace: pig_developmental_stage
+def: "Postnatal stage that refers to a new born pig which is under 24 hours old." [Bgee:curator]
+subset: granular_stage
subset: life_stage
-synonym: "adult stage" BROAD []
-xref: BILS:0000113
-xref: EV:0300064
-xref: EV:0300070
-xref: MIAA:0000403
-xref: MmusDv:0000110
-xref: OGES:000026
-xref: OGES:000027
-xref: XAO:1000093
-xref: ZFS:0000044
+synonym: "newborn day 0" EXACT []
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000066 ! fully formed stage
-relationship: preceded_by UBERON:0000112 ! sexually immature stage
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/345" xsd:anyURI
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/499" xsd:anyURI
-
-[Term]
-id: UBERON:0000165
-name: mouth
-namespace: uberon
-def: "The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks)." [https://github.com/obophenotype/uberon/wiki/The-digestive-tract, Wikipedia:Mouth]
-subset: efo_slim
-subset: major_organ
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "adult mouth" NARROW []
-synonym: "cavital oralis" RELATED OMO:0003011 [Wikipedia:Mouth]
-synonym: "cavitas oris" RELATED [BTO:0001090]
-synonym: "cavum oris" RELATED [BTO:0001090]
-synonym: "mouth cavity" RELATED [BTO:0001090]
-synonym: "oral region" RELATED [EHDAA2:0001326]
-synonym: "oral vestibule" RELATED [BTO:0001090]
-synonym: "regio oralis" EXACT OMO:0003011 [BTO:0004698, FMA:49184, FMA:TA]
-synonym: "rima oris" RELATED [BTO:0001090]
-synonym: "stoma" RELATED []
-synonym: "stomatodaeum" RELATED [VHOG:0000812]
-synonym: "trophic apparatus" RELATED [http://orcid.org/0000-0002-6601-2165]
-synonym: "vestibule of mouth" RELATED [BTO:0001090]
-synonym: "vestibulum oris" RELATED [BTO:0001090]
-xref: AAO:0010355
-xref: BTO:0001090
-xref: BTO:0004698
-xref: CALOHA:TS-1315
-xref: EFO:0000825
-xref: EHDAA2:0001326
-xref: EHDAA:542
-xref: EMAPA:16262
-xref: FBbt:00003126 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:49184
-xref: GAID:75
-xref: galen:Mouth
-xref: http://purl.obolibrary.org/obo/uberon/images/lamprey_sucker_rosava_3238889218.jpg
-xref: MA:0000341
-xref: MA:0002474
-xref: MAT:0000038
-xref: MESH:D009055
-xref: MIAA:0000038
-xref: SCTID:21082005
-xref: TADS:0000040
-xref: TAO:0000547
-xref: TAO:0000590
-xref: TGMA:0000131
-xref: VHOG:0000280
-xref: VHOG:0000812
-xref: Wikipedia:Mouth
-xref: XAO:0003029
-xref: ZFA:0000547
-xref: ZFA:0000590
-is_a: UBERON:0004921 {notes="the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts"} ! subdivision of digestive tract
-intersection_of: UBERON:0004921 ! subdivision of digestive tract
-intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract
-relationship: develops_from UBERON:0035804 ! future mouth
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: proximalmost_part_of UBERON:0001555 ! digestive tract
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI
-property_value: development_notes "some AOs place this as developing from the stomodeum but we weaken this to developmental contribution, as the mouth includes non-ectodermal derivatives" xsd:string
-property_value: external_definition "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010355", ontology="AAO", source="AAO:BJB"}
-property_value: external_ontology_notes "in FMA, the tongue, palate etc are part of the mouth which is itself a subdivision of the face. ZFA includes a separate class 'oral region' which is part of the mouth, but excludes tongue and lips" xsd:string {external_ontology="FMA"}
-property_value: has_relational_adjective "oral" xsd:string
-property_value: homology_notes "Molecular and developmental cell lineage data suggest that the acoel mouth opening is homologous to the mouth of protostomes and deuterostomes and that the last common ancestor of the Bilateria (the 'urbilaterian') had only this single digestive opening.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000812", ontology="VHOG", source="DOI:10.1038/nature07309 Hejnol A, Martindale MQ, Acoel development indicates the independent evolution of the bilaterian mouth and anus. Nature (2008)", source="http://bgee.unil.ch/"}
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI
-
-[Term]
-id: UBERON:0000307
-name: blastula
-namespace: uberon
-alt_id: UBERON:0007011
-def: "Organism at the blastula stage - an early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence." [Wikipedia:Blastula]
-subset: inconsistent_with_fma
-synonym: "blastosphere" RELATED [Wikipedia:Blastula]
-synonym: "blastula embryo" EXACT [BILA:0000059]
-xref: BILA:0000059
-xref: BTO:0000128
-xref: GAID:1294
-xref: MESH:D036703
-xref: OGEM:000006
-xref: Wikipedia:Blastula
-is_a: UBERON:0000922 ! embryo
-intersection_of: UBERON:0000468 ! multicellular organism
-intersection_of: existence_starts_and_ends_during UBERON:0000108 ! blastula stage
-relationship: develops_from UBERON:0007010 ! cleaving embryo
-relationship: existence_starts_and_ends_during UBERON:0000108 ! blastula stage
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png" xsd:anyURI
-property_value: editor_note "TODO - check relationship with epiblast. Note in FMA this is not a subclass of embryo, but in uberon embryo is the whole organism from zygote onwards and thus includes the blastula" xsd:string
-
-[Term]
-id: UBERON:0000383
-name: musculature of body
-namespace: uberon
-def: "The subdivision of the musculoskeletal system that consists of all the muscles of the body[VSAO, modified]." [VSAO:0000033]
-subset: efo_slim
-subset: human_reference_atlas
-subset: pheno_slim
-synonym: "muscle system" EXACT []
-synonym: "muscle system of body" EXACT []
-synonym: "muscular system" EXACT [FMA:72954]
-synonym: "musculature system" EXACT [BILA:0000088]
-synonym: "muskelsystem" RELATED [BTO:0001485]
-synonym: "set of all muscles" EXACT [FMA:72954]
-synonym: "set of muscles of body" EXACT [FMA:72954]
-synonym: "vertebrate muscular system" EXACT [BTO:0001369]
-xref: AAO:0000307
-xref: BILA:0000088
-xref: BTO:0001369
-xref: BTO:0001485
-xref: EFO:0000801
-xref: FMA:72954
-xref: MA:0002888
-xref: MAT:0000025
-xref: MIAA:0000025
-xref: VSAO:0000033
-xref: XAO:0004042
-is_a: UBERON:0011216 ! organ system subdivision
-intersection_of: UBERON:0011216 ! organ system subdivision
-intersection_of: composed_primarily_of UBERON:0001015 ! musculature
-relationship: capable_of GO:0003012 ! muscle system process
-relationship: composed_primarily_of UBERON:0001015 ! musculature
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: never_in_taxon NCBITaxon:6040
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
-property_value: editor_note "consider whether this should be restricted to skeletal musculature. See https://github.com/obophenotype/uberon/issues/77" xsd:string
-property_value: external_definition "Anatomical system that consists of the muscles of the body.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000033", ontology="VSAO", source="VSAO:curator"}
-property_value: external_ontology_notes "we place the MA term musculature here, rather than under uberon:musculature, as this seems more appropriate given the structure of MA" xsd:string {external_ontology="MA"}
-
-[Term]
-id: UBERON:0000463
-name: organism substance
-namespace: uberon
-def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [http://orcid.org/0000-0001-9114-8737]
-subset: common_anatomy
-subset: pheno_slim
-subset: upper_level
-synonym: "body fluid or substance" EXACT [MA:0002450]
-synonym: "body substance" EXACT [FMA:9669]
-synonym: "organism substance" EXACT [CARO:0000004]
-synonym: "portion of body substance" EXACT [FMA:9669]
-synonym: "portion of organism substance" EXACT [ZFA:0001487]
-xref: AAO:0010839
-xref: AEO:0000004
-xref: BILA:0000004
-xref: CALOHA:TS-2101
-xref: CARO:0000004
-xref: EHDAA2:0003004
-xref: EMAPA:35178
-xref: FBbt:00007019 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:9669
-xref: galen:BodySubstance
-xref: HAO:0000004
-xref: MA:0002450
-xref: NCIT:C13236
-xref: SPD:0000008
-xref: TAO:0001487
-xref: TGMA:0001824
-xref: VHOG:0001726
-xref: XAO:0004001
-xref: ZFA:0001487
-is_a: UBERON:0000465 ! material anatomical entity
-relationship: has_quality PATO:0002198 ! quality of a substance
-relationship: part_of UBERON:0000468 {notes="this relationship may be too strong and may be weakened in future"} ! multicellular organism
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: IAO:0000589 "organism substance (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000464
-name: anatomical space
-namespace: uberon
-def: "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [http://orcid.org/0000-0001-9114-8737]
-subset: common_anatomy
-subset: upper_level
-synonym: "anatomical spaces" RELATED OMO:0003004 [ZFA:0001643]
-synonym: "lumen" BROAD []
-synonym: "lumen space" EXACT []
-synonym: "space" BROAD []
-xref: AAO:0010110
-xref: AEO:0000005
-xref: BILA:0000005
-xref: CARO:0000005
-xref: EHDAA2:0003005
-xref: FBbt:00007017 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:5897
-xref: HAO:0000005
-xref: NCIT:C94478
-xref: TAO:0001668
-xref: TGMA:0001825
-xref: UMLS:C0524461 {source="ncithesaurus:Lumen_Space"}
-xref: VHOG:0001728
-xref: XAO:0003190
-xref: ZFA:0001643
-is_a: UBERON:0000466 ! immaterial anatomical entity
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-relationship: surrounded_by UBERON:0000061 ! anatomical structure
-property_value: IAO:0000589 "anatomical space (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000465
-name: material anatomical entity
-namespace: uberon
-def: "Anatomical entity that has mass." [http://orcid.org/0000-0001-9114-8737]
-subset: common_anatomy
-subset: upper_level
-xref: AAO:0010264
-xref: AEO:0000006
-xref: BILA:0000006
-xref: CARO:0000006
-xref: EHDAA2:0003006
-xref: FBbt:00007016 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:67165
-xref: HAO:0000006
-xref: TAO:0001836
-xref: TGMA:0001826
-xref: VHOG:0001721
-is_a: BFO:0000040 ! material entity
-is_a: UBERON:0001062 ! anatomical entity
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: IAO:0000589 "material anatomical entity (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000466
-name: immaterial anatomical entity
-namespace: uberon
-def: "Anatomical entity that has no mass." [http://orcid.org/0000-0001-9114-8737]
-subset: common_anatomy
-subset: upper_level
-synonym: "immaterial physical anatomical entity" EXACT [FMA:67112]
-xref: AAO:0010265
-xref: AEO:0000007
-xref: BILA:0000007
-xref: CARO:0000007
-xref: EHDAA2:0003007
-xref: FBbt:00007015 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:67112
-xref: HAO:0000007
-xref: TAO:0001835
-xref: TGMA:0001827
-xref: VHOG:0001727
-is_a: BFO:0000141 ! immaterial entity
-is_a: UBERON:0001062 ! anatomical entity
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: IAO:0000589 "immaterial anatomical entity (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000467
-name: anatomical system
-namespace: uberon
-def: "Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function." [CARO:0000011]
-subset: common_anatomy
-subset: human_reference_atlas
-subset: pheno_slim
-subset: uberon_slim
-subset: upper_level
-synonym: "anatomical systems" RELATED OMO:0003004 [ZFA:0001439]
-synonym: "body system" EXACT [BIRNLEX:14]
-synonym: "connected anatomical system" EXACT [CARO:0000011]
-synonym: "organ system" EXACT []
-synonym: "system" BROAD [GO:0048731]
-xref: AAO:0000007
-xref: AEO:0000011
-xref: BILA:0000011
-xref: BIRNLEX:14
-xref: BSA:0000049
-xref: CALOHA:TS-2088
-xref: CARO:0000011
-xref: EHDAA2:0003011
-xref: EHDAA:392
-xref: EMAPA:16103
-xref: EV:0100000
-xref: FBbt:00004856 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:7149
-xref: galen:AnatomicalSystem
-xref: HAO:0000011
-xref: IDOMAL:0002460 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0003-4423-4370", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
-xref: MA:0000003
-xref: NCIT:C12919
-xref: SCTID:278195005
-xref: TAO:0001439
-xref: TGMA:0001831
-xref: UMLS:C0460002 {source="ncithesaurus:Organ_System"}
-xref: VHOG:0001725
-xref: WBbt:0005746
-xref: WBbt:0005763
-xref: Wikipedia:Organ_system
-xref: XAO:0003002
-xref: ZFA:0001439
-is_a: UBERON:0000061 ! anatomical structure
-relationship: has_part UBERON:0000062 ! organ
-relationship: part_of UBERON:0000468 ! multicellular organism
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
-relationship: seeAlso EHDAA2:0001330
-property_value: IAO:0000589 "anatomical system (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000468
-name: multicellular organism
-namespace: uberon
-def: "Anatomical structure that is an individual member of a species and consists of more than one cell." [CARO:0000012, http://orcid.org/0000-0001-9114-8737, Wikipedia:Multi-cellular_organism]
-subset: common_anatomy
-subset: efo_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: upper_level
-synonym: "body" RELATED [AEO:0000103, BIRNLEX:18, FMA:256135, NCIT:C13041]
-synonym: "Koerper" RELATED [BTO:0001489]
-synonym: "multi-cellular organism" EXACT [CARO:0000012]
-synonym: "organism" BROAD [FBbt:00000001, VHOG:0000671, WBbt:0007833]
-synonym: "whole body" RELATED [BTO:0001489]
-synonym: "whole organism" RELATED [FBbt:00000001]
-xref: AAO:0010026
-xref: AEO:0000191
-xref: BILA:0000012
-xref: BIRNLEX:18
-xref: BSA:0000038
-xref: BTO:0000042
-xref: CARO:0000012
-xref: EFO:0002906
-xref: EHDAA2:0003103
-xref: EHDAA2:0003191
-xref: EHDAA:1
-xref: EMAPA:25765
-xref: EV:0100016
-xref: FBbt:00000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:256135
-xref: galen:Organism
-xref: HAO:0000012
-xref: NCIT:C13041
-xref: ncithesaurus:Whole_Organism
-xref: SCTID:243928005
-xref: TADS:0000001
-xref: TAO:0001094
-xref: TGMA:0001832
-xref: VHOG:0000671
-xref: WBbt:0007833
-xref: Wikipedia:Multi-cellular_organism
-xref: XAO:0003004
-xref: ZFA:0001094
-is_a: UBERON:0010000 ! multicellular anatomical structure
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: editor_note "TODO - split body and mc organism? body continues after death stage" xsd:string
-property_value: has_relational_adjective "organismal" xsd:string
-property_value: IAO:0000589 "multicellular organism (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000476
-name: acellular anatomical structure
-namespace: uberon
-def: "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue." [http://orcid.org/0000-0001-9114-8737]
-subset: common_anatomy
-subset: vertebrate_core
-synonym: "acellular anatomical structures" RELATED OMO:0003004 [ZFA:0000382]
-xref: AAO:0010268
-xref: AEO:0000040
-xref: BILA:0000040
-xref: CARO:0000040
-xref: EHDAA2:0003040
-xref: FBbt:00007013 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:63863
-xref: HAO:0000040
-xref: TAO:0000382
-xref: TGMA:0001841
-xref: XAO:0003162
-xref: ZFA:0000382
-is_a: UBERON:0000061 ! anatomical structure
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: IAO:0000589 "acellular anatomical structure (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000479
-name: tissue
-namespace: uberon
-def: "Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation." [CARO:0000043]
-subset: common_anatomy
-subset: pheno_slim
-subset: upper_level
-synonym: "portion of tissue" EXACT [CARO:0000043]
-synonym: "simple tissue" NARROW [AEO:0000043]
-synonym: "tissue portion" EXACT []
-xref: AAO:0000607
-xref: AAO:0010054
-xref: AEO:0000043
-xref: BILA:0000043
-xref: BIRNLEX:19
-xref: CALOHA:TS-2090
-xref: CARO:0000043
-xref: EHDAA2:0003043
-xref: EMAPA:35868
-xref: FBbt:00007003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:9637
-xref: galen:Tissue
-xref: HAO:0000043
-xref: MA:0003002
-xref: MESH:D014024
-xref: NCIT:C12801
-xref: TAO:0001477
-xref: TGMA:0001844
-xref: UMLS:C0040300 {source="ncithesaurus:Tissue"}
-xref: VHOG:0001757
-xref: WBbt:0005729
-xref: XAO:0003040
-xref: ZFA:0001477
-is_a: UBERON:0010000 {source="CARO"} ! multicellular anatomical structure
-relationship: has_part GO:0031012 ! extracellular matrix
-relationship: part_of UBERON:0000468 ! multicellular organism
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: editor_note "changed label and definition to reflect CARO2" xsd:string
-property_value: IAO:0000589 "tissue (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000481
-name: multi-tissue structure
-namespace: uberon
-def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [CARO:0000055, http://orcid.org/0000-0001-9114-8737]
-subset: common_anatomy
-subset: upper_level
-synonym: "multi-tissue structures" RELATED OMO:0003004 [ZFA:0001488]
-xref: AAO:0010048
-xref: AEO:0000055
-xref: BILA:0000055
-xref: CARO:0000055
-xref: EHDAA2:0003055
-xref: FBbt:00007010 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: HAO:0000055
-xref: TAO:0001488
-xref: TGMA:0001847
-xref: VHOG:0001762
-xref: XAO:0003037
-xref: ZFA:0001488
-is_a: UBERON:0010000 {source="CARO"} ! multicellular anatomical structure
-relationship: has_part UBERON:0000479 ! tissue
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: IAO:0000589 "multi-tissue structure (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000483
-name: epithelium
-namespace: uberon
-def: "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO]." [http://orcid.org/0000-0001-9114-8737, Wikipedia:Epithelium]
-comment: Editor note: surface epithelium may contain non-epithelial cells, such as melanocytes, lymphocytes and dendritic cells, within the sheet of epithelial cells. Do we consider these part of the epithelium, or located-in it?
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "epithelial tissue" EXACT []
-synonym: "portion of epithelium" EXACT [FMA:9639]
-xref: AAO:0000144
-xref: AAO:0010055
-xref: AEO:0000066
-xref: BILA:0000066
-xref: BTO:0000416
-xref: CALOHA:TS-0288
-xref: CARO:0000066
-xref: EHDAA2:0003066
-xref: EMAPA:32738
-xref: FBbt:00007005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:9639
-xref: GAID:402
-xref: HAO:0000066
-xref: MA:0003060
-xref: MESH:D004848
-xref: NCIT:C12710
-xref: SCTID:31610004
-xref: TAO:0001486
-xref: UMLS:C0014609 {source="ncithesaurus:Epithelium"}
-xref: VHOG:0000387
-xref: Wikipedia:Epithelium
-xref: XAO:0003045
-xref: ZFA:0001486
-is_a: UBERON:0000479 ! tissue
-intersection_of: UBERON:0000479 ! tissue
-intersection_of: composed_primarily_of CL:0000066 ! epithelial cell
-relationship: composed_primarily_of CL:0000066 ! epithelial cell
-relationship: has_part GO:0005911 ! cell-cell junction
-relationship: has_part UBERON:0005769 ! basement membrane of epithelium
-relationship: in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa
-property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI
-property_value: has_relational_adjective "epithelial" xsd:string
-property_value: homology_notes "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"}
-property_value: IAO:0000589 "epithelium (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000490
-name: unilaminar epithelium
-namespace: uberon
-def: "Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium.[FMA]." [FMA:45561, http://orcid.org/0000-0001-9114-8737]
-subset: vertebrate_core
-synonym: "simple epithelium" EXACT [FMA:45561]
-synonym: "unilaminar epithelia" RELATED OMO:0003004 [ZFA:0001495]
-xref: AAO:0010062
-xref: AEO:0000073
-xref: BILA:0000073
-xref: BTO:0002073
-xref: CARO:0000073
-xref: EHDAA2:0003073
-xref: FMA:45561
-xref: HAO:0000073
-xref: NCIT:C33554
-xref: SCTID:309043004
-xref: TAO:0001495
-xref: UMLS:C0682574 {source="ncithesaurus:Simple_Epithelium"}
-xref: XAO:0004007
-xref: ZFA:0001495
-is_a: UBERON:0000483 ! epithelium
-property_value: editor_note "consider adding disjointness axiom between unilaminar and multilaminar - but note that this will render EHDAA2:0003244 (chorionic trophoblast) unsatisfiable" xsd:string
-property_value: external_definition "Epithelium that consists of a single layer of epithelial cells.[CARO]" xsd:string {date_retrieved="2012-06-20", external_class="CARO:0000073", ontology="CARO", source="FMA:45561", source="http://orcid.org/0000-0001-9114-8737"}
-property_value: IAO:0000589 "unilaminar epithelium (AEO)" xsd:string
-
-[Term]
-id: UBERON:0000922
-name: embryo
-namespace: http://www.xspan.org/obo.owl#
-namespace: uberon
-alt_id: UBERON:0000922
-alt_id: ZFA:0001105
-def: "Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant." [BTO:0000379, FB:FBrf0039741, FB:FBrf0041814, GO:0009790, Wikipedia:Embryo]
-subset: efo_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "developing organism" RELATED [BILA:0000056]
-synonym: "developmental tissue" RELATED []
-synonym: "embryonic organism" EXACT [BILA:0000056]
-xref: AAO:0011035
-xref: AEO:0000169
-xref: BILA:0000056
-xref: BSA:0000039
-xref: BTO:0000379
-xref: CALOHA:TS-0229
-xref: EFO:0001367
-xref: EHDAA2:0000002
-xref: EHDAA2_RETIRED:0003236
-xref: EHDAA:38
-xref: EMAPA:16039
-xref: FBbt:00000052 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:69068
-xref: GAID:963
-xref: http://neurolex.org/wiki/Category\:Embryonic_organism
-xref: IDOMAL:0000646 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0003-4423-4370", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
-xref: MAT:0000226
-xref: MESH:D004622
-xref: MIAA:0000019
-xref: NCIT:C28147
-xref: OGEM:000001
-xref: SCTID:57991002
-xref: UMLS:C0013935 {source="ncithesaurus:Embryo"}
-xref: VHOG:0001766
-xref: Wikipedia:Embryo
-xref: XAO:0000113
-xref: ZFA:0000103
-is_a: UBERON:0000468 ! multicellular organism
-intersection_of: UBERON:0000468 ! multicellular organism
-intersection_of: existence_ends_with UBERON:0000068 ! embryo stage
-intersection_of: existence_starts_with UBERON:0000068 ! embryo stage
-relationship: existence_ends_with UBERON:0000068 ! embryo stage
-relationship: existence_starts_with UBERON:0000068 ! embryo stage
-relationship: part_of UBERON:0004716 ! conceptus
-property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/2/2d/Wrinkledfrog_embryos.jpg" xsd:anyURI
-property_value: external_ontology_notes "Obsoleted in ZFA. Note that embryo is not classified as an embryonic structure - an embryonic structure is only the parts of an embryo" xsd:string {external_ontology="ZFA"}
-property_value: has_relational_adjective "embryonic" xsd:string
-property_value: IAO:0000589 "embryo (AEO)" xsd:string
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/503" xsd:anyURI
-
-[Term]
-id: UBERON:0000923
-name: germ layer
-namespace: uberon
-def: "A layer of cells produced during the process of gastrulation during the early development of the animal embryo, which is distinct from other such layers of cells, as an early step of cell differentiation. The three types of germ layers are the endoderm, ectoderm, and mesoderm." [https://github.com/obophenotype/uberon/issues/203, Wikipedia:Germ_layer]
-comment: Classically the germ layers are ectoderm, mesoderm and endoderm. Alternatively: primary = ectoderm, endoderm; secondary=mesoderm; tertiary=dorsal mesoderm, NC[https://github.com/obophenotype/uberon/wiki/The-neural-crest]
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "embryonic germ layer" RELATED []
-synonym: "embryonic germ layers" RELATED []
-synonym: "embryonic tissue" BROAD [FMA:69069]
-synonym: "germinal layer" EXACT [ncithesaurus:Germinal_Layer]
-synonym: "primary germ layer" NARROW [GO:0001704, ZFA:0001122]
-xref: AAO:0000480
-xref: BILA:0000035
-xref: BTO:0000556
-xref: EMAPA:36033
-xref: FBbt:00000110 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:69069
-xref: GAID:1303
-xref: MESH:D005855
-xref: NCIT:C12950
-xref: NCIT:C54105
-xref: TAO:0001122
-xref: UMLS:C0920502 {source="ncithesaurus:Embryonic_Tissue"}
-xref: UMLS:C1708239 {source="ncithesaurus:Germinal_Layer"}
-xref: VHOG:0001223
-xref: Wikipedia:Germ_layer
-xref: XAO:0003011
-xref: ZFA:0001122
-is_a: UBERON:0010316 ! germ layer / neural crest
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-property_value: homology_notes "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001223", ontology="VHOG", source="ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0000924
-name: ectoderm
-namespace: uberon
-def: "Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue." [Wikipedia:Ectoderm]
-subset: efo_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "embryonic ectoderm" EXACT [VHOG:0000153]
-xref: AAO:0000137
-xref: BILA:0000036
-xref: BTO:0000315
-xref: CALOHA:TS-0216
-xref: EFO:0000414
-xref: EHDAA2:0000428
-xref: EMAPA:16069
-xref: EV:0100003
-xref: FBbt:00000111 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:69070
-xref: GAID:1304
-xref: MAT:0000155
-xref: MAT:0000173
-xref: MESH:D004475
-xref: MIAA:0000173
-xref: NCIT:C12703
-xref: SCTID:362851007
-xref: TAO:0000016
-xref: UMLS:C0013574 {source="ncithesaurus:Ectoderm"}
-xref: VHOG:0000153
-xref: Wikipedia:Ectoderm
-xref: XAO:0000001
-xref: ZFA:0000016
-is_a: UBERON:0000923 ! germ layer
-relationship: develops_from UBERON:0006601 ! presumptive ectoderm
-relationship: has_part CL:0000221 ! ectodermal cell
-relationship: immediate_transformation_of UBERON:0006601 {source="Bgee:AN"} ! presumptive ectoderm
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png" xsd:anyURI
-property_value: external_definition "Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000137", ontology="AAO", source="AAO:EJS"}
-property_value: has_relational_adjective "ectodermal" xsd:string
-property_value: homology_notes "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000153", ontology="VHOG", source="ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0000925
-name: endoderm
-namespace: uberon
-def: "Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut." [Wikipedia:Endoderm]
-subset: efo_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "entoderm" RELATED DEPRECATED [DOI:10.5962/bhl.title.1013]
-xref: AAO:0000139
-xref: BILA:0000038
-xref: BTO:0000800
-xref: CALOHA:TS-0273
-xref: EFO:0002545
-xref: EHDAA2:0000436
-xref: EMAPA:16062
-xref: EV:0100005
-xref: FBbt:00000125 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:69071
-xref: GAID:1305
-xref: MAT:0000175
-xref: MESH:D004707
-xref: MIAA:0000175
-xref: NCIT:C12706
-xref: SCTID:362855003
-xref: TAO:0000017
-xref: UMLS:C0014144 {source="ncithesaurus:Endoderm"}
-xref: VHOG:0000154
-xref: Wikipedia:Endoderm
-xref: XAO:0000090
-xref: ZFA:0000017
-is_a: UBERON:0000923 ! germ layer
-relationship: develops_from UBERON:0006595 ! presumptive endoderm
-relationship: has_part CL:0000223 ! endodermal cell
-relationship: immediate_transformation_of UBERON:0006595 {source="Bgee:AN"} ! presumptive endoderm
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png" xsd:anyURI
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png" xsd:anyURI
-property_value: has_relational_adjective "endodermal" xsd:string
-property_value: homology_notes "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000154", ontology="VHOG", source="ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0000926
-name: mesoderm
-namespace: uberon
-alt_id: UBERON:0003263
-def: "The middle germ layer of the embryo, between the endoderm and ectoderm." [Wikipedia:Mesoderm]
-subset: efo_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "embryonic mesoderm" RELATED [VHOG:0000152]
-synonym: "entire mesoderm" RELATED [https://orcid.org/0000-0002-6601-2165, SCTID:362854004]
-synonym: "mesodermal mantle" RELATED []
-xref: AAO:0000304
-xref: BILA:0000037
-xref: BTO:0000839
-xref: CALOHA:TS-0623
-xref: EFO:0001981
-xref: EHDAA2:0001128
-xref: EHDAA:124
-xref: EHDAA:160
-xref: EHDAA:183
-xref: EMAPA:16083
-xref: EV:0100006
-xref: FBbt:00000126 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:69072
-xref: GAID:522
-xref: MAT:0000174
-xref: MESH:D008648
-xref: MIAA:0000174
-xref: NCIT:C12750
-xref: SCTID:362854004
-xref: TAO:0000041
-xref: UMLS:C0025485 {source="ncithesaurus:Mesoderm"}
-xref: VHOG:0000152
-xref: Wikipedia:Mesoderm
-xref: XAO:0000050
-xref: ZFA:0000041
-is_a: UBERON:0000923 {notes="sometimes not considered primary"} ! germ layer
-relationship: develops_from UBERON:0006603 ! presumptive mesoderm
-relationship: has_part CL:0000222 ! mesodermal cell
-relationship: immediate_transformation_of UBERON:0006603 {source="Bgee:AN"} ! presumptive mesoderm
-relationship: never_in_taxon NCBITaxon:6040
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png" xsd:anyURI
-property_value: external_definition "Primary germ layer that is the middle of the embryonic germ layers.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000304", ontology="AAO", source="AAO:EJS"}
-property_value: has_relational_adjective "mesodermal" xsd:string
-property_value: homology_notes "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000152", ontology="VHOG", source="ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722", source="http://bgee.unil.ch/"}
-property_value: taxon_notes "sponges do not seem to have a mesoderm and accordingly Amphimedon lacks transcription factors involved in mesoderm development (Fkh, Gsc, Twist, Snail)[http://www.nature.com/nature/journal/v466/n7307/full/nature09201.html]. Mesoderm may not be homologous across verteberates" xsd:string {source="https://github.com/obophenotype/uberon/wiki/The-neural-crest"}
-
-[Term]
-id: UBERON:0000930
-name: stomodeum
-namespace: uberon
-def: "Anterior part of the embryonic digestive tract that develops into a mouth. The stomodeum includes as parts an invagination of the ectoderm and the stomodeal cavity." [http://orcid.org/0000-0002-6601-2165, https://github.com/obophenotype/uberon/issues/326, Wikipedia:Stomodeum]
-subset: grouping_class
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "mouth pit" RELATED [EMAPA:16263]
-synonym: "mouth primordium" EXACT [XAO:0000269]
-synonym: "oral ectoderm" RELATED [ZFA:0001290, ZFIN:ZDB-PUB-100726-23]
-synonym: "oral pit" RELATED [EMAPA:16263]
-synonym: "primitive oral cavity" EXACT [https://orcid.org/0000-0002-6601-2165]
-synonym: "stomatodeum" EXACT [Wikipedia:Stomodeum]
-synonym: "stomodaeum" EXACT []
-synonym: "stomodeal-hypophyseal primordium" BROAD [XAO:0000269]
-xref: BTO:0004224
-xref: EHDAA2:0001929
-xref: EMAPA:16263
-xref: FBbt:00000439 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:295846
-xref: NCIT:C34306
-xref: TAO:0001290
-xref: TGMA:0000135
-xref: UMLS:C1514977 {source="ncithesaurus:Stomodeum"}
-xref: Wikipedia:Stomodeum
-xref: XAO:0000269
-xref: ZFA:0001290
-is_a: UBERON:0013522 ! subdivision of tube
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0000924 ! ectoderm
-relationship: part_of UBERON:0035804 ! future mouth
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png" xsd:anyURI
-property_value: editor_note "consider indicating location. e.g. anterior. Note some AOs place this as part of oral opening, but it's not clear when this structure comes into existence" xsd:string
-property_value: external_definition "Anterior part of the embryonic alimentary canal formed as an invagination of the ectoderm; the future mouth.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001290", ontology="TAO", source="ZFIN:curator"}
-property_value: external_definition "the primordial mouth region of the developing head, initially a midline ectodermal depression between the forebrain bulge (cranially) and the heart bulge (caudally) and between the maxillary and mandibular components of the first pharyngeal arch; the stomodeum is separated from the anterior end of the foregut by the buccopharyngeal membrane; the mouth is developed partly from the stomodeum, and partly from the floor of the anterior portion of the foregut; the lips, teeth, and gums are formed from the walls of the stomodeum, but the tongue is developed in the floor of the pharynx" xsd:string {source="MP:0012522", taxon="NCBITaxon:40674"}
-property_value: has_relational_adjective "stomodeal" xsd:string
-property_value: taxon_notes "This class groups together disparate structures as all being the anterior part of the early metazoan digestive tract and precursor of the mouth. However, the developmental processes vary, so this class may be split in future. E.g. in mammals it is a rostral depression surrounded by prominences. Outgrowth of the prominences produces a stomodeal cavity." xsd:string
-
-[Term]
-id: UBERON:0000982
-name: skeletal joint
-namespace: uberon
-def: "Anatomical structure that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO]." [GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070, VSAO:0000101, Wikipedia:Joint]
-subset: efo_slim
-subset: organ_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "articular joint" RELATED [BTO:0001686]
-synonym: "articulation" BROAD [VSAO:0000101]
-synonym: "joint" BROAD [FMA:7490, VSAO:0000101]
-synonym: "joints" RELATED OMO:0003004 [ZFA:0001596]
-xref: AEO:0000182
-xref: BTO:0001686
-xref: CALOHA:TS-2023
-xref: EFO:0000948
-xref: EMAPA:35456
-xref: FMA:7490
-xref: GAID:102
-xref: galen:Joint
-xref: MA:0000319
-xref: MAT:0000188
-xref: MESH:D007596
-xref: MIAA:0000188
-xref: NCIT:C13044
-xref: RETIRED_EHDAA2:0003182
-xref: SCTID:302536002
-xref: TAO:0000367
-xref: UMLS:C0022417 {source="ncithesaurus:Joint"}
-xref: VHOG:0001276
-xref: VSAO:0000101
-xref: Wikipedia:Joint
-xref: XAO:0000171
-xref: ZFA:0001596
-is_a: UBERON:0004905 ! articulation
-relationship: connects UBERON:0004765 ! skeletal element
-relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system
-property_value: external_definition "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000101", ontology="VSAO", source="PSPUB:0000170"}
-property_value: external_definition "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000367", ontology="TAO", source="TAO:pem"}
-property_value: IAO:0000589 "skeletal joint (AEO)" xsd:string
-
-[Term]
-id: UBERON:0001007
-name: digestive system
-namespace: uberon
-def: "Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes." [FB:gg, NLM:alimentary+system, Wikipedia:Digestive_system]
-subset: efo_slim
-subset: human_reference_atlas
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "alimentary system" RELATED []
-synonym: "alimentary tract" RELATED []
-synonym: "gastrointestinal system" RELATED []
-synonym: "gut" RELATED []
-xref: AAO:0000129
-xref: BILA:0000082
-xref: BTO:0000058
-xref: CALOHA:TS-1293
-xref: EFO:0000793
-xref: FBbt:00005055 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:7152
-xref: GAID:278
-xref: galen:DigestiveSystem
-xref: MA:0002431
-xref: MAT:0000018
-xref: MESH:D004064
-xref: MIAA:0000018
-xref: ncithesaurus:Digestive_System
-xref: SCTID:278859004
-xref: TADS:0000170
-xref: TAO:0000339
-xref: WBbt:0005748
-xref: Wikipedia:Digestive_system
-xref: XAO:0000125
-xref: ZFA:0000339
-is_a: UBERON:0000467 ! anatomical system
-intersection_of: UBERON:0000467 ! anatomical system
-intersection_of: capable_of GO:0022600 ! digestive system process
-relationship: capable_of GO:0022600 ! digestive system process
-relationship: existence_ends_during UBERON:0000066 ! fully formed stage
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
-property_value: external_definition "An anatomical system consisting of the alimentary canal and digestive glands responsible for intake, absorption, digestion and excretion of food.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000129", ontology="AAO", source="AAO:BJB"}
-property_value: external_ontology_notes "many anatomy ontologies consider gastrointestinal system synonymous with digestive system. here we follow MA in dividing digestive system into gastrointestinal and hepatobiliary. hepatobiliary includes the liver and biliary tract. species-specific AO classes are categorized according to whether liver is included. For example, XAO includes liver as part of XAO:0000125 alimentary system, so we assume this class is the more generic class" xsd:string {external_ontology="MA"}
-property_value: has_relational_adjective "digestive" xsd:string
-
-[Term]
-id: UBERON:0001015
-name: musculature
-namespace: uberon
-def: "A subdivision of the muscular system corresponding to a subdisivision of an organism." [https://orcid.org/0000-0002-6601-2165, Wikipedia:Muscular_system]
-subset: efo_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "muscle group" EXACT []
-synonym: "muscle system" RELATED []
-synonym: "muscles" RELATED []
-synonym: "muscles set" EXACT []
-synonym: "musculature" EXACT []
-synonym: "musculature system" RELATED []
-synonym: "musculi" EXACT OMO:0003011 [FMA:32558, FMA:TA]
-synonym: "set of muscles" EXACT [FMA:32558]
-synonym: "set of skeletal muscles" EXACT [MA:0000165]
-xref: BTO:0000887
-xref: EFO:0001949
-xref: EMAPA:35577
-xref: FMA:32558
-xref: MA:0000165
-xref: NCIT:C13056
-xref: TAO:0000548
-xref: UMLS:C0026845 {source="ncithesaurus:Muscle"}
-xref: VSAO:0005038
-xref: WBbt:0005737
-xref: Wikipedia:Muscular_system
-xref: ZFA:0000548
-is_a: UBERON:0011216 ! organ system subdivision
-relationship: composed_primarily_of UBERON:0001630 ! muscle organ
-relationship: mutually_spatially_disjoint_with UBERON:0001474
-relationship: part_of UBERON:0000383 ! musculature of body
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/e5/Muscles_anterior_labeled.png" xsd:anyURI
-property_value: external_ontology_notes "In FMA this is classified as a set of organs. ZFA musculature system has subtypes, so it is classified here. WBbt muscular system has subtypes so it goes here. Note that we use the MA term set of skeletal muscles here as it seems most appropriate (*not* MA:musculature). AAO is generally confused here." xsd:string {external_ontology="FMA"}
-
-[Term]
-id: UBERON:0001016
-name: nervous system
-namespace: uberon
-def: "The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organism, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO]." [BIRNLEX:844, ISBN:0-14-051288-8, ISBN:3110148986, NLM:nervous+system, WB:rynl, Wikipedia:Nervous_system, ZFIN:curator]
-subset: cumbo
-subset: efo_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "nerve net" NARROW [Wikipedia:Nerve_net]
-synonym: "neurological system" EXACT [GO:0050877]
-synonym: "systema nervosum" RELATED OMO:0003011 [Wikipedia:Nervous_system]
-xref: AAO:0000324
-xref: BILA:0000079
-xref: BIRNLEX:844
-xref: BTO:0001484
-xref: CALOHA:TS-1313
-xref: EFO:0000802
-xref: EHDAA2:0001246
-xref: EHDAA:826
-xref: EMAPA:16469
-xref: EV:0100162
-xref: FBbt:00005093 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:7157
-xref: GAID:466
-xref: MA:0000016
-xref: MAT:0000026
-xref: MESH:D009420
-xref: MIAA:0000026
-xref: NCIT:C12755
-xref: neuronames:3236
-xref: SCTID:278196006
-xref: TAO:0000396
-xref: UMLS:C0027763 {source="ncithesaurus:Nervous_System"}
-xref: VHOG:0000402
-xref: WBbt:0005735
-xref: Wikipedia:Nervous_system
-xref: XAO:0000177
-xref: ZFA:0000396
-is_a: UBERON:0000467 ! anatomical system
-relationship: capable_of GO:0050877 ! nervous system process
-relationship: composed_primarily_of CL:0002319 ! neural cell
-relationship: develops_from UBERON:0016880 ! future nervous system
-relationship: existence_ends_during UBERON:0000066 ! fully formed stage
-relationship: has_part CL:0000540 ! neuron
-relationship: immediate_transformation_of UBERON:0016880 {source="Bgee:AN"} ! future nervous system
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: never_in_taxon NCBITaxon:6040
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg" xsd:anyURI
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png" xsd:anyURI
-property_value: external_definition "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000396", ontology="TAO", source="ZFIN:curator"}
-property_value: external_definition "Anatomical system consisting of nerve bodies and nerve fibers which regulate the response of the body to external and internal stimuli.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000324", ontology="AAO", source="AAO:BJB"}
-property_value: has_relational_adjective "nervous" xsd:string
-property_value: has_relational_adjective "neural" xsd:string
-property_value: homology_notes "Nervous systems evolved in the ancestor of Eumetazoa.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000402", ontology="VHOG", source="ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.117", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0001017
-name: central nervous system
-namespace: uberon
-def: "The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord." [GO:0021551, http://www.frontiersinzoology.com/content/7/1/29, https://sourceforge.net/p/geneontology/ontology-requests/11422/]
-subset: cumbo
-subset: efo_slim
-subset: human_reference_atlas
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "cerebrospinal axis" NARROW [FMA:55675]
-synonym: "CNS" EXACT OMO:0003000 []
-synonym: "neuraxis" RELATED [FMA:55675]
-synonym: "systema nervosum centrale" EXACT OMO:0003011 [FMA:55675, FMA:TA]
-xref: AAO:0000090
-xref: BAMS:CNS
-xref: BILA:0000080
-xref: BIRNLEX:1099
-xref: BTO:0000227
-xref: CALOHA:TS-0150
-xref: EFO:0000908
-xref: EHDAA2:0000225
-xref: EHDAA:828
-xref: EMAPA:16470
-xref: EMAPA:16754
-xref: EV:0100163
-xref: FBbt:00005094 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:55675
-xref: GAID:570
-xref: MA:0000167
-xref: MAT:0000457
-xref: MESH:D002490
-xref: NCIT:C12438
-xref: neuronames:854
-xref: SCTID:278199004
-xref: TAO:0000012
-xref: UMLS:C0927232 {source="ncithesaurus:Central_Nervous_System", source="BIRNLEX:1099"}
-xref: VHOG:0000293
-xref: Wikipedia:Central_nervous_system
-xref: XAO:0000215
-xref: ZFA:0000012
-is_a: UBERON:0004121 ! ectoderm-derived structure
-is_a: UBERON:0011216 {source="FBbt", source="cjm"} ! organ system subdivision
-relationship: develops_from UBERON:0016879 ! future central nervous system
-relationship: immediate_transformation_of UBERON:0016879 {source="Bgee:AN"} ! future central nervous system
-relationship: in_taxon NCBITaxon:33213 ! Bilateria
-relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"}
-relationship: part_of UBERON:0001016 ! nervous system
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
-property_value: external_definition "Part of the nervous system which includes the brain and spinal cord.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000090", ontology="AAO", source="AAO:BJB"}
-property_value: external_definition "The brain and spinal cord. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000012", ontology="TAO", source="ZFIN:curator"}
-property_value: external_definition "The central nervous system (CNS) is the part of the nervous system which includes the brain, spinal cord, and nerve cell layer of the retina (CUMBO)." xsd:string {source="BIRNLEX:1099"}
-property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2); Taken together, our data make a very strong case that the complex molecular mediolateral architecture of the developing trunk CNS (central nervous system), as shared between Platynereis and vertebrates, was already present in their last common ancestor, Urbilateria. The concept of bilaterian nervous system centralization implies that neuron types concentrate on one side of the trunk, as is the case in vertebrates and many invertebrates including Platynereis, where they segregate and become spatially organized (as opposed to a diffuse nerve net). Our data reveal that a large part of the spatial organization of the annelid and vertebrate CNS was already present in their last common ancestor, which implies that Urbilateria had already possessed a CNS (reference 3).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000293", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28 (reference 1), ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.165 (reference 2), DOI:10.1016/j.cell.2007.02.040 Denes AS, Jekely G, Steinmetz PRH, Raible F, Snyman H, Prud'homme B, Ferrier DEK, Balavoine G and Arendt D, Molecular architecture of annelid nerve cord supports common origin of nervous system centralization in Bilateria. Cell (2007) (reference 3)", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0001049
-name: neural tube
-namespace: uberon
-def: "In the developing vertebrate, the neural tube is the embryo's precursor to the central nervous system, which comprises the brain and spinal cord. The neural groove gradually deepens as the neural folds become elevated, and ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube, the neural tube or neural canal (which strictly speaking is the center of the neural tube), the ectodermal wall of which forms the rudiment of the nervous system. [WP,unvetted]." [Wikipedia:Neural_tube]
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "neural primordium" RELATED []
-synonym: "presumptive central nervous system" RELATED []
-synonym: "tubus neuralis" RELATED OMO:0003011 [Wikipedia:Neural_tube]
-xref: AAO:0010617
-xref: BTO:0001057
-xref: CALOHA:TS-2371
-xref: DHBA:10154
-xref: EHDAA2:0001254
-xref: EHDAA:2869
-xref: EHDAA:908
-xref: EMAPA:16164
-xref: EMAPA:16757
-xref: FMA:293882
-xref: MAT:0000069
-xref: MESH:D054259 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0001-9439-5346", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
-xref: MIAA:0000069
-xref: NCIT:C34226
-xref: neuronames:1365
-xref: SCTID:362852000
-xref: TAO:0001135
-xref: UMLS:C0231024 {source="ncithesaurus:Neural_Tube"}
-xref: VHOG:0000307
-xref: Wikipedia:Neural_tube
-xref: XAO:0003204
-xref: ZFA:0001135
-is_a: UBERON:0003914 {source="EHDAA2"} ! epithelial tube
-is_a: UBERON:0005291 ! embryonic tissue
-is_a: UBERON:0010371 ! ecto-epithelium
-is_a: UBERON:0016879 ! future central nervous system
-relationship: develops_from UBERON:0005068 ! neural rod
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png" xsd:anyURI
-property_value: development_notes "The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium" xsd:string {source="GO:0021915"}
-property_value: external_definition "Hollow epithelial tube on dorsal side of the embryo that develops into the central nervous system.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010617", ontology="AAO", source="AAO:JOR"}
-property_value: external_definition "The dorsal tubular structure in the vertebrate embryo that develops into the brain and spinal cord. [TFD][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000307", ontology="VHOG", source="http://bgee.unil.ch/", source="http://medical-dictionary.thefreedictionary.com/neural+tube"}
-property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000307", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0001062
-name: anatomical entity
-namespace: uberon
-def: "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species." [FMA:62955, http://orcid.org/0000-0001-9114-8737]
-subset: common_anatomy
-subset: upper_level
-xref: AAO:0010841
-xref: AEO:0000000
-xref: BFO:0000004
-xref: BILA:0000000
-xref: BIRNLEX:6
-xref: CARO:0000000
-xref: EHDAA2:0002229
-xref: FBbt:10000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:62955
-xref: HAO:0000000
-xref: MA:0000001
-xref: NCIT:C12219
-xref: TAO:0100000
-xref: TGMA:0001822
-xref: UMLS:C1515976 {source="ncithesaurus:Anatomic_Structure_System_or_Substance"}
-xref: WBbt:0000100
-xref: XAO:0000000
-xref: ZFA:0100000
-is_a: BFO:0000004 ! independent continuant
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: IAO:0000589 "anatomical entity (AEO)" xsd:string
-
-[Term]
-id: UBERON:0001434
-name: skeletal system
-namespace: uberon
-def: "Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system." [GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070, VSAO:0000027]
-subset: efo_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "set of all bones and joints" NARROW SENSU []
-synonym: "skeleton system" EXACT []
-synonym: "Skelettsystem" RELATED [BTO:0001486]
-xref: AAO:0000566
-xref: BTO:0001486
-xref: CALOHA:TS-1320
-xref: EFO:0000806
-xref: EHDAA2:0003168
-xref: EMAPA:35773
-xref: FMA:23881
-xref: MA:0000018
-xref: NCIT:C12788
-xref: TAO:0000434
-xref: UMLS:C0037253 {source="ncithesaurus:Skeletal_System"}
-xref: VHOG:0001254
-xref: VSAO:0000027
-xref: XAO:0003060
-xref: ZFA:0000434
-is_a: UBERON:0011216 ! organ system subdivision
-intersection_of: UBERON:0011216 ! organ system subdivision
-intersection_of: has_part UBERON:0004288 ! skeleton
-intersection_of: has_part UBERON:0004770 ! articular system
-relationship: existence_ends_during UBERON:0000066 ! fully formed stage
-relationship: has_part UBERON:0004288 ! skeleton
-relationship: has_part UBERON:0004770 ! articular system
-relationship: mutually_spatially_disjoint_with UBERON:0001016 ! nervous system
-relationship: part_of UBERON:0002204 ! musculoskeletal system
-property_value: external_definition "Anatomical system consisting of multiple elements and tissues that provides physical support.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000434", ontology="TAO", source="TAO:wd"}
-property_value: external_definition "Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000027", ontology="VSAO", source="GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070", source="PSPUB:0000170"}
-property_value: external_definition "System that provides physical support to the organism.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000566", ontology="AAO", source="AAO:LAP"}
-property_value: external_ontology_notes "GO defines skeletal system very generically: The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) GO:0001501; however, all annotations are to vertebrates" xsd:string {external_ontology="GO"}
-property_value: has_relational_adjective "skeletal" xsd:string
-property_value: homology_notes "By taking a holistic approach, integration of the evidence from molecular and developmental features of model organisms, the phylogenetic distribution in the 'new animal phylogeny' and the earliest fossilized remains of mineralized animal skeletons suggests independent origins of the skeleton at the phylum level.[debated][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001254", ontology="VHOG", source="DOI:10.1159/000324245 Donoghue PCJ, Sansom IJ, Origin and early evolution of vertebrate skeletonization. Microscopy research and technique (2002)", source="http://bgee.unil.ch/"}
-property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/The-skeletal-system" xsd:anyURI
-
-[Term]
-id: UBERON:0001555
-name: digestive tract
-namespace: uberon
-def: "A tube extending from the mouth to the anus." [https://github.com/geneontology/go-ontology/issues/7549, Wikipedia:Talk\:Human_gastrointestinal_tract]
-subset: human_reference_atlas
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "alimentary canal" NARROW []
-synonym: "alimentary tract" NARROW []
-synonym: "digestive canal" RELATED [BTO:0000058]
-synonym: "digestive tube" EXACT []
-synonym: "enteric tract" EXACT [ZFA:0000112]
-synonym: "gut" BROAD []
-synonym: "gut tube" RELATED []
-xref: AAO:0010023
-xref: BILA:0000083
-xref: BTO:0000511
-xref: BTO:0000545
-xref: EHDAA2:0000726
-xref: EHDAA:518
-xref: EMAPA:16247
-xref: FBbt:00003125 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:45615
-xref: galen:AlimentaryTract
-xref: MA:0000917
-xref: MESH:D041981 {sssom:mapping_provider="https://github.com/biopragmatics/biomappings", sssom:mapping_justification="https://w3id.org/semapv/vocab/LexicalMatching"}
-xref: NCIT:C34082
-xref: TAO:0000112
-xref: TGMA:0001819
-xref: UMLS:C0017189 {source="ncithesaurus:Gastrointestinal_Tract"}
-xref: VHOG:0000309
-xref: WBbt:0005743
-xref: ZFA:0000112
-is_a: UBERON:0000025 ! tube
-relationship: connects UBERON:0000165 ! mouth
-relationship: develops_from UBERON:0007026 ! presumptive gut
-relationship: immediate_transformation_of UBERON:0007026 {source="NCBIBook:NBK10107"} ! presumptive gut
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"}
-relationship: never_in_taxon NCBITaxon:41324 {source="DOI:10.1371/journal.pone.0016309"}
-relationship: part_of UBERON:0001007 ! digestive system
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
-property_value: external_definition "The alimentary or digestive tract, and associated organs.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000112", ontology="TAO", source="ZFIN:curator"}
-property_value: external_ontology_notes "FMA also has a term 'gastrointestinal tract', but this includes the liver." xsd:string {external_ontology="FMA"}
-property_value: external_ontology_notes "we place the MA and EMAPA class here, although the intent is probably a smaller region. See https://github.com/obophenotype/uberon/issues/509" xsd:string {external_ontology="MA"}
-property_value: homology_notes "The bilaterian gut is typically a complete tube that opens to the exterior at both ends. It consists of mouth, foregut, midgut, hindgut, and anus (reference 1); Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut (reference 2).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000309", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.203, ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11", source="http://bgee.unil.ch/"}
-property_value: terminology_notes "we following Kardong in naming the entire tube from mouth to anus the alimentary canal. Kardong calls the portion of this tract that excludes buccal cavity and pharynx the 'alimentary canal', consider adding an extra class for this" xsd:string
-
-[Term]
-id: UBERON:0001630
-name: muscle organ
-namespace: uberon
-def: "Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO]." [GO:0007517]
-subset: organ_slim
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "muscle" BROAD [ZFA:0005145]
-xref: EMAPA:37474 {source="MA:th"}
-xref: EV:0100146
-xref: FMA:5022
-xref: GAID:131
-xref: galen:Muscle
-xref: MA:0000015
-xref: SCTID:71616004
-xref: TAO:0005145
-xref: VHOG:0001245
-xref: XAO:0000172
-xref: ZFA:0005145
-is_a: UBERON:0000062 ! organ
-is_a: UBERON:0005090 ! muscle structure
-intersection_of: UBERON:0000062 ! organ
-intersection_of: composed_primarily_of UBERON:0002385 ! muscle tissue
-relationship: composed_primarily_of UBERON:0002385 ! muscle tissue
-relationship: part_of UBERON:0001015 ! musculature
-property_value: external_definition "Portion of tissue composed of contractile fibers.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005145", ontology="TAO", source="ZFIN:curator"}
-property_value: has_relational_adjective "muscular" xsd:string
-property_value: homology_notes "It seems clear that the metazoan ancestor inherited from its unicellular descendants an actin cytoskeleton and motor-proteins of the myosin superfamily. Within metazoans, these two molecules were arranged into effective contractile units, the muscles. The basic trends for muscle evolution are already expressed in the diploblastic taxa.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001245", ontology="VHOG", source="ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.75", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0002050
-name: embryonic structure
-namespace: uberon
-def: "Anatomical structure that is part of an embryo." [BTO:0000174, ZFIN:curator]
-subset: efo_slim
-subset: inconsistent_with_fma
-subset: vertebrate_core
-synonym: "developing embryonic structure" EXACT [FBbt:00004208]
-synonym: "developing structure" RELATED []
-synonym: "embryonale Struktur" RELATED [BTO:0000174]
-synonym: "embryonic anatomical structure" EXACT [RETIRED_EHDAA2:0003169]
-synonym: "embryonic structures" RELATED OMO:0003004 [ZFA:0001105]
-xref: AAO:0000138
-xref: BILA:0000034
-xref: BTO:0000174
-xref: CALOHA:TS-2110
-xref: EFO:0000461
-xref: FBbt:00004208 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:69067
-xref: GAID:407
-xref: MESH:D004628
-xref: NCIT:C13229
-xref: RETIRED_EHDAA2:0003169
-xref: SCTID:667009
-xref: TAO:0001105
-xref: UMLS:C0013948 {source="ncithesaurus:Embryonic_Structure"}
-xref: VSAO:0000178
-xref: XAO:0003042
-xref: ZFA:0001105
-is_a: UBERON:0005423 ! developing anatomical structure
-intersection_of: UBERON:0005423 ! developing anatomical structure
-intersection_of: part_of UBERON:0000922 ! embryo
-relationship: part_of UBERON:0000922 ! embryo
-property_value: external_definition "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000138", ontology="AAO", source="AAO:BJB"}
-property_value: external_definition "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001105", ontology="TAO", source="ZFIN:curator"}
-property_value: external_definition "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000178", ontology="VSAO", source="ZFIN:curator"}
-property_value: external_ontology_notes "in FMA embryo is_a embryonic structure" xsd:string {external_ontology="FMA"}
-
-[Term]
-id: UBERON:0002204
-name: musculoskeletal system
-namespace: uberon
-def: "Anatomical system that consists of the muscular and skeletal systems." [https://github.com/obophenotype/uberon/issues/77, VSAO:0000031, VSAO:curator]
-subset: uberon_slim
-synonym: "musculo-skeletal system" EXACT []
-xref: AAO:0010546
-xref: CALOHA:TS-1311
-xref: EMAPA:32714
-xref: EV:0100139
-xref: FMA:7482
-xref: GAID:98
-xref: MA:0002418
-xref: MESH:D009141
-xref: NCIT:C12754
-xref: SCTID:278858007
-xref: UMLS:C0026860 {source="ncithesaurus:Musculoskeletal_System"}
-xref: VHOG:0001275
-xref: VSAO:0000031
-xref: Wikipedia:Musculoskeletal_system
-xref: XAO:0000168
-is_a: UBERON:0000467 ! anatomical system
-relationship: capable_of_part_of GO:0040011 ! locomotion
-relationship: existence_ends_during UBERON:0000066 ! fully formed stage
-relationship: has_developmental_contribution_from UBERON:0000926 {notes="check ctenophore"} ! mesoderm
-relationship: has_part UBERON:0000383 ! musculature of body
-relationship: has_part UBERON:0001434 ! skeletal system
-property_value: dc:contributor https://github.com/cmungall
-property_value: external_definition "Anatomical system that provides locomotion and physical support to the organism.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010546", ontology="AAO", source="AAO:EJS"}
-property_value: has_relational_adjective "musculoskeletal" xsd:string
-property_value: homology_notes "There are more than 50,000 extant vertebrate species, representing over 500 million years of evolution. During that time, the vertebrate musculoskeletal systems have adapted to aquatic, terrestrial, fossorial, and arboreal lifestyles, while simultaneously retaining functionally integrated axial and appendicular skeletal systems.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001275", ontology="VHOG", source="DOI:10.1002/jez.b.21246 Shearman RM, Burke AC, The lateral somitic frontier in ontogeny and phylogeny. Journal of Experimental Zoology (2009)", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0002328
-name: notochord
-namespace: uberon
-def: "A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube." [http://tolweb.org/Chordata/2499, https://github.com/obophenotype/uberon/issues/25, https://github.com/obophenotype/uberon/issues/271, ISBN:0815318960, Wikipedia:Notochord]
-comment: The notochord appears early in embryogeny and plays an important role in promoting or organizing the embryonic development of nearby structures. In most adult chordates the notochord disappears or becomes highly modified. In some non-vertebrate chordates and fishes the notochord persists as a laterally flexible but incompressible skeletal rod that prevents telescopic collapse of the body during swimming[TOLWEB]
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "embryonic notocord" EXACT []
-synonym: "notochorda" RELATED OMO:0003011 [Wikipedia:Notochord]
-synonym: "notocord" EXACT [ZFA:0000135]
-xref: AAO:0000327
-xref: BTO:0001768
-xref: CALOHA:TS-0690
-xref: EHDAA2:0001277
-xref: EHDAA:1241
-xref: EHDAA:6021
-xref: EMAPA:16191
-xref: EV:0100002
-xref: FMA:85521
-xref: GAID:1311
-xref: http://evolution.berkeley.edu/evolibrary/images/history/notochords.jpg
-xref: MAT:0000281
-xref: MESH:D009672
-xref: NCIT:C12463
-xref: SCTID:308820002
-xref: TAO:0000135
-xref: UMLS:C0028439 {source="ncithesaurus:Notochord"}
-xref: VHOG:0000199
-xref: VSAO:0000032
-xref: Wikipedia:Notochord
-xref: XAO:0000055
-xref: ZFA:0000135
-is_a: UBERON:0000062 {source="PMID:15890825"} ! organ
-is_a: UBERON:0000481 {source="VSAO"} ! multi-tissue structure
-is_a: UBERON:0004120 ! mesoderm-derived structure
-is_a: UBERON:0004121 ! ectoderm-derived structure
-relationship: develops_from UBERON:0004880 {source="ZFA"} ! chordamesoderm
-relationship: develops_from UBERON:0006267 {source="EHDAA2"} ! notochordal plate
-relationship: dorsal_to UBERON:0001555 ! digestive tract
-relationship: existence_starts_during UBERON:0000068 ! embryo stage
-relationship: in_taxon NCBITaxon:7711 {source="http://tolweb.org/Chordata/2499"} ! Chordata
-relationship: part_of NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0011137 ! axial skeletal system
-relationship: produces PR:000014841 ! sonic hedgehog protein
-relationship: ventral_to UBERON:0001049 ! neural tube
-property_value: axiom_lost_from_external_ontology "relationship type change: differentiates_from mesoderm (AAO:0000304) CHANGED TO: develops_from mesoderm (UBERON:0000926)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000327", ontology="AAO"}
-property_value: dc:contributor https://github.com/cmungall
-property_value: dc:contributor https://github.com/wdahdul
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png" xsd:anyURI
-property_value: development_notes "In between vertebra the notochord becomes the nucleus pulposus, under it degenerates, and at anterior end in some species its tissue merges with some of the cranial bones.. Some organisms retain a post-embryonic notochord." xsd:string
-property_value: external_definition "Avascular multi-tissue structure composed of large vacuolated epithelial cells (chordablasts) and perichordal fibrous tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000032", ontology="VSAO", source="PSPUB:0000170"}
-property_value: external_definition "Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000135", ontology="TAO", source="ZFIN:curator"}
-property_value: external_definition "Slender rod of fibrous connective tissue surrounding a core of fluid-filled cells of mesodermal origin; it lies above the gut and directly beneath the spinal cord. The notochord is present during early development and in a few cases it is retained through life; however, usually the notochord is replaced by the vertebral column.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000327", ontology="AAO", source="AAO:LAP"}
-property_value: has_relational_adjective "notochordal" xsd:string
-property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (3) a stiff, longitudinal rod of turgid cells along the dorsal part of the body that is called a notochord (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000199", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0002346
-name: neurectoderm
-namespace: uberon
-def: "Embryonic ectoderm that gives rise to nervous tissue." [Wikipedia:Neuroectoderm]
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "epithelium tubi neuralis; neuroectoderma" RELATED OMO:0003011 [Wikipedia:Neuroectoderm]
-synonym: "neuaral ectoderm" RELATED []
-synonym: "neural ectoderm" EXACT []
-synonym: "neuroectoderm" EXACT []
-synonym: "presumptive central nervous system" RELATED []
-synonym: "ventral neurogenic region" RELATED [VHOG:0000150]
-xref: AAO:0011074
-xref: BILA:0000039
-xref: CALOHA:TS-1212
-xref: EHDAA2:0001248
-xref: EHDAA:1498
-xref: EHDAA:255
-xref: EMAPA:16073
-xref: EV:0100004
-xref: FBbt:00001057 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:87657
-xref: MAT:0000176
-xref: MIAA:0000176
-xref: NCIT:C34228
-xref: TAO:0001120
-xref: UMLS:C1518271 {source="ncithesaurus:Neuroectoderm"}
-xref: VHOG:0000150
-xref: Wikipedia:Neuroectoderm
-xref: XAO:0000042
-xref: ZFA:0001120
-is_a: UBERON:0000923 ! germ layer
-is_a: UBERON:0004121 ! ectoderm-derived structure
-relationship: has_part CL:0000133 ! neurectodermal cell
-property_value: has_relational_adjective "neurectodermal" xsd:string
-property_value: homology_notes "(...) the ability of ectoderm to produce neuronal cells is a general metazoan feature.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000150", ontology="VHOG", source="DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)", source="http://bgee.unil.ch/"}
-property_value: terminology_notes "we prefer neurectoderm to neural ectoderm since placodal ectoderm is not classified here" xsd:string
-
-[Term]
-id: UBERON:0002385
-name: muscle tissue
-namespace: http://www.xspan.org/obo.owl#
-namespace: uberon
-def: "Muscle tissue is a contractile tissue made up of actin and myosin fibers[GO]." [GO:0060537, https://sourceforge.net/tracker/index.php?func=detail&aid=2801266&group_id=36855&atid=440764, Wikipedia:Muscle_tissue]
-comment: Vertebrate muscle is categorized into three major muscle types defined by their structural and functional properties: skeletal, cardiac and smooth. In Dmel the counterparts are somatic, heart/cardiac and visceral. Here we take a cell type based approach.
-subset: uberon_slim
-synonym: "muscular tissue" EXACT SENSU []
-synonym: "portion of muscle tissue" EXACT [FMA:9641]
-synonym: "textus muscularis" EXACT []
-xref: AAO:0000306
-xref: AEO:0000122
-xref: CALOHA:TS-0642
-xref: EHDAA2:0003122
-xref: EMAPA:32715
-xref: FMA:9641
-xref: galen:MuscleTissue
-xref: MA:0002437
-xref: MESH:D009132
-xref: NCIT:C12435
-xref: SCTID:91727004
-xref: UMLS:C2328219 {source="ncithesaurus:Muscle_Tissue"}
-xref: Wikipedia:Muscle_tissue
-is_a: UBERON:0000479 ! tissue
-is_a: UBERON:0004120 ! mesoderm-derived structure
-intersection_of: UBERON:0000479 ! tissue
-intersection_of: composed_primarily_of CL:0000187 ! muscle cell
-relationship: capable_of GO:0006936 ! muscle contraction
-relationship: composed_primarily_of CL:0000187 ! muscle cell
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: mutually_spatially_disjoint_with UBERON:0003714
-relationship: part_of UBERON:0001015 ! musculature
-property_value: external_definition "One of the four types of tissue in traditional classifications. Tissue that contains cells with contractile filaments that move past each other and change the size of the cell. Muscle tissue also is separated into three distinct categories.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000306", ontology="AAO", source="AAO:LAP"}
-property_value: IAO:0000589 "muscle tissue (AEO)" xsd:string
-
-[Term]
-id: UBERON:0002532
-name: epiblast (generic)
-namespace: uberon
-def: "In amniote animal embryology, the epiblast is a tissue type derived either from the inner cell mass in mammals or the blastodisc in birds and reptiles. It lies above the hypoblast. In mammalian embryogenesis, the columnar cells of the epiblast are adjacent to the trophoblast, while the cuboidal cells of the hypoblast are closer to the blastocoele. The epiblast, whilst referred to as the primary ectoderm, differentiates to form all three layers of the trilaminar germ disc in a process called gastrulation[WP]. The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation[ZFA]." [Wikipedia:Epiblast, ZFIN:curator]
-subset: early_development
-subset: grouping_class
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "blastocyst" RELATED []
-synonym: "ectoblast" RELATED [MP:0003886]
-synonym: "epiblast" EXACT [VHOG:0000243]
-synonym: "epiblastus" RELATED OMO:0003011 [Wikipedia:Epiblast]
-synonym: "primitive ectoderm" RELATED [VHOG:0000243]
-xref: BTO:0004593
-xref: FMA:296704
-xref: MAT:0000067
-xref: MIAA:0000067
-xref: VHOG:0000243
-xref: Wikipedia:Epiblast
-is_a: UBERON:0002050 ! embryonic structure
-relationship: has_part CL:0000352 ! epiblast cell
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png" xsd:anyURI
-property_value: editor_note "MP says - tissue that gives rise to the ectoderm, endoderm and mesoderm of the embryo proper. In HOG, epiblast is part of primitive streak/blastpore, which is inconsistent with the MP definition of primitive streak as a ridge of the epiblast. Note that these terms, epiblast and hypoblast, are also used to describe layers of the avian embryonic blastoderm, but the layers so-named seem to be altogether different in these two kinds of vertebrate embryos(CVS). Consider obsoleting this as a grouping class" xsd:string
-property_value: homology_notes "In pregastrula zebrafish embryos, the epiblast is an inverted cup of cells that sits on top of a large yolk cell. (...) In amniote embryos (mammals and birds), gastrulation initiates in an epithelial layer called the epiblast. Cells in the epiblast undergo an epithelial to mesenchymal transition (EMT), migrate through the primitive streak (PS), and incorporate in the middle (mesoderm) or outer (endoderm) layer. The presumptive definitive endoderm (DE) cells invade and displace an outer layer of extraembryonic tissue cells, the hypoblast in chick and the visceral endoderm (VE) in mouse, which form supporting structures such as the yolk sac.[uncertain][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000243", ontology="VHOG", source="DOI:10.1146/annurev.cellbio.042308.113344 Zorn AM, Wells JM, Vertebrate endoderm development and organ formation. Annual Review of Cell Developmental Biology (2009)", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0002548
-name: larva
-namespace: http://www.xspan.org/obo.owl#
-namespace: uberon
-def: "A distinct juvenile form many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle." [Wikipedia:Larva]
-subset: uberon_slim
-synonym: "ammocoete" NARROW [Wikipedia:Larva]
-synonym: "bipinnaria" NARROW [Wikipedia:Larva]
-synonym: "caterpillar" NARROW [Wikipedia:Larva]
-synonym: "glochidium" NARROW [Wikipedia:Larva]
-synonym: "grub" NARROW [Wikipedia:Larva]
-synonym: "larval organism" EXACT [TAO:0002048]
-synonym: "leptocephalus" NARROW [Wikipedia:Larva]
-synonym: "maggot" NARROW [Wikipedia:Larva]
-synonym: "naiad" NARROW [Wikipedia:Larva]
-synonym: "nymph" NARROW [Wikipedia:Larva]
-synonym: "planula" NARROW [Wikipedia:Larva]
-synonym: "tadpole" NARROW [Wikipedia:Larva]
-synonym: "trochophore" NARROW [Wikipedia:Larva]
-synonym: "veliger" NARROW [Wikipedia:Larva]
-synonym: "wriggler" NARROW [Wikipedia:Larva]
-synonym: "zoea" NARROW [Wikipedia:Larva]
-xref: AEO:0000126
-xref: BTO:0000707
-xref: FBbt:00001727 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: HAO:0000459
-xref: MESH:D007814 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0001-9439-5346", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
-xref: TAO:0002048
-xref: Wikipedia:Larva
-is_a: UBERON:0000468 ! multicellular organism
-is_a: UBERON:0005423 ! developing anatomical structure
-intersection_of: UBERON:0000468 ! multicellular organism
-intersection_of: existence_starts_and_ends_during UBERON:0000069 ! larval stage
-relationship: existence_starts_and_ends_during UBERON:0000069 ! larval stage
-relationship: has_quality PATO:0001185 ! larval
-property_value: editor_note "TODO discriminate between stages and organisms" xsd:string
-property_value: external_definition "Whole organism that is premetamorphic or a very immature individual.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0002048", ontology="TAO", source="TAO:wd"}
-property_value: has_relational_adjective "larval" xsd:string
-property_value: IAO:0000589 "larva (AEO)" xsd:string
-
-[Term]
-id: UBERON:0002553
-name: anatomical cavity
-namespace: uberon
-def: "Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina." [FMA:67552]
-subset: upper_level
-synonym: "cavity" BROAD []
-xref: BIRNLEX:1011
-xref: EMAPA:37442 {source="MA:th"}
-xref: FMA:67552
-xref: galen:Cavity
-xref: MA:0002447
-xref: NCIT:C34007
-is_a: UBERON:0000464 ! anatomical space
-relationship: location_of UBERON:0000463 ! organism substance
-
-[Term]
-id: UBERON:0003068
-name: axial mesoderm
-namespace: uberon
-def: "The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord." [GO:0048318, Wikipedia:Chordamesoderm]
-subset: efo_slim
-subset: uberon_slim
-synonym: "chordamesoderm" RELATED [Wikipedia:Chordamesoderm]
-xref: AAO:0011017
-xref: EFO:0003647
-xref: TAO:0001204
-xref: VHOG:0000107
-xref: Wikipedia:Chordamesoderm
-xref: XAO:0000205
-xref: ZFA:0001204
-is_a: UBERON:0002050 ! embryonic structure
-relationship: develops_from UBERON:0000926 ! mesoderm
-relationship: in_taxon NCBITaxon:7711 ! Chordata
-relationship: part_of UBERON:0000926 ! mesoderm
-property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png" xsd:anyURI
-property_value: external_definition "The portion of the mesoderm underlying the midline of the embryo. [Gastrulation:_From_cells_to_embryo_(2004)_Cold_Spring_Harbor, Glossary_XV, New_York:_Cold_Spring_Harbor_Laboratory_Press, Stern_CD][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000107", ontology="VHOG", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0003075
-name: neural plate
-namespace: uberon
-def: "A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]." [ISBN:0815318960, OMD:neural+plate, Wikipedia:Neural_plate, ZFIN:curator]
-subset: pheno_slim
-subset: uberon_slim
-subset: vertebrate_core
-synonym: "lamina neuralis" RELATED OMO:0003011 [Wikipedia:Neural_plate]
-synonym: "presumptive central nervous system" RELATED []
-xref: AAO:0011072
-xref: BTO:0001765
-xref: DHBA:10153
-xref: DMBA:15565
-xref: EHDAA:346
-xref: EHDAA:902
-xref: EMAPA:35593
-xref: FMA:293879
-xref: MESH:D054258 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0001-9439-5346", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
-xref: NCIT:C34225
-xref: neuronames:1362
-xref: RETIRED_EHDAA2:0001252
-xref: TAO:0000132
-xref: UMLS:C0920623 {source="ncithesaurus:Neural_Plate"}
-xref: VHOG:0000068
-xref: Wikipedia:Neural_plate
-xref: XAO:0000249
-xref: ZFA:0000132
-is_a: UBERON:0005291 ! embryonic tissue
-is_a: UBERON:0010371 ! ecto-epithelium
-is_a: UBERON:0016879 ! future central nervous system
-relationship: developmentally_induced_by UBERON:0002328 {source="Wikipedia"} ! notochord
-relationship: develops_from UBERON:0007284 ! presumptive neural plate
-relationship: immediate_transformation_of UBERON:0007284 {source="Bgee:AN"} ! presumptive neural plate
-relationship: in_taxon NCBITaxon:7711 {source="GOTAX:0000352"} ! Chordata
-property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png" xsd:anyURI
-property_value: external_definition "The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000132", ontology="TAO", source="ZFIN:curator"}
-property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000068", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28", source="http://bgee.unil.ch/"}
+relationship: immediately_preceded_by UBERON:0000068 ! embryo stage
+relationship: part_of UBERON:0007221 ! neonate stage
+property_value: end_dpb "1.0" xsd:float
+property_value: start_dpb "0.0" xsd:float
[Term]
-id: UBERON:0003143
-name: pupa
-namespace: uberon
-def: "An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis." [https://github.com/obophenotype/uberon/issues/562, Wikipedia:Pupa]
-subset: efo_slim
-synonym: "aurelia" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
-synonym: "chrysalides" NARROW OMO:0003004 [NCBITaxon:37572, Wikipedia:Pupa]
-synonym: "chrysalis" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
-synonym: "pupae" RELATED OMO:0003004 []
-xref: BTO:0001143
-xref: EFO:0002684
-xref: FBbt:00002953 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: HAO:0000886
-xref: MESH:D011679 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0001-9439-5346", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
-xref: Wikipedia:Pupa
-is_a: UBERON:0000468 ! multicellular organism
-intersection_of: UBERON:0000468 ! multicellular organism
-intersection_of: existence_starts_and_ends_during UBERON:0000070 ! pupal stage
-relationship: existence_starts_and_ends_during UBERON:0000070 ! pupal stage
-relationship: has_quality PATO:0001187 ! pupal
-relationship: in_taxon NCBITaxon:33392 ! Endopterygota
-property_value: dc:contributor https://github.com/ANiknejad
-property_value: dc:contributor https://github.com/cmungall
-property_value: dc:contributor https://github.com/dosumis
-property_value: dc:contributor https://github.com/fbastian
-property_value: dc:contributor https://github.com/mmc46
-property_value: has_relational_adjective "pupal" xsd:string
+id: SscrDv:0000073
+name: 1-day-old stage (pig)
+namespace: pig_developmental_stage
+def: "Postnatal stage that refers to a pig which is over 1 and under 2 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000072 ! 0-day-old stage (pig)
+relationship: part_of UBERON:0007221 ! neonate stage
+property_value: end_dpb "2.0" xsd:float
+property_value: start_dpb "1.0" xsd:float
[Term]
-id: UBERON:0003914
-name: epithelial tube
-namespace: http://www.xspan.org/obo.owl#
-namespace: uberon
-def: "Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system." [GO:0060562, PMID:12526790]
-synonym: "epithelial or endothelial tube" EXACT []
-xref: AEO:0000114
-xref: EHDAA2:0003114
-xref: FBbt:00007474 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-is_a: UBERON:0000025 ! tube
-is_a: UBERON:0000483 ! epithelium
-intersection_of: UBERON:0000483 ! epithelium
-intersection_of: has_quality PATO:0002299 ! tubular
-relationship: has_part CL:0000068 ! duct epithelial cell
-property_value: curator_notes "contrast with a multi-tissue tube, which has as parts both epithelium, connective tissue, possibly muscle layers" xsd:string
-property_value: IAO:0000589 "epithelial tube (AEO)" xsd:string
+id: SscrDv:0000074
+name: 2-day-old stage (pig)
+namespace: pig_developmental_stage
+def: "Postnatal stage that refers to a pig which is over 2 and under 3 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000073 ! 1-day-old stage (pig)
+relationship: part_of UBERON:0007221 ! neonate stage
+property_value: end_dpb "3.0" xsd:float
+property_value: start_dpb "2.0" xsd:float
[Term]
-id: UBERON:0004111
-name: anatomical conduit
-namespace: http://www.xspan.org/obo.owl#
-namespace: uberon
-def: "Any tube, opening or passage that connects two distinct anatomical spaces." [http://orcid.org/0000-0002-6601-2165]
-subset: common_anatomy
-synonym: "foramen" NARROW [EHDAA2:0003080]
-synonym: "foramina" NARROW OMO:0003004 [https://orcid.org/0000-0002-6601-2165]
-synonym: "opening" RELATED []
-synonym: "ostia" RELATED OMO:0003004 []
-synonym: "ostium" RELATED []
-xref: AEO:0000080
-xref: EHDAA2:0003080
-xref: FMA:242873
-xref: SCTID:346902003
-xref: Wikipedia:Foramen
-is_a: CARO:0000010 ! anatomical boundary
-is_a: UBERON:0010000 ! multicellular anatomical structure
-intersection_of: UBERON:0010000 ! multicellular anatomical structure
-intersection_of: conduit_for UBERON:0000061 ! anatomical structure
-intersection_of: has_part UBERON:0013686 ! anatomical conduit space
-relationship: conduit_for UBERON:0000061 ! anatomical structure
-relationship: connects UBERON:0000464 {cardinality="2"} ! anatomical space
-relationship: has_part UBERON:0013686 ! anatomical conduit space
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: external_ontology_notes "FMA has both conduit and conduit space. In EHDAA2 this is a surface feature" xsd:string {external_ontology="FMA"}
-property_value: IAO:0000589 "anatomical conduit (AEO)" xsd:string
+id: SscrDv:0000075
+name: 3-day-old stage (pig)
+namespace: pig_developmental_stage
+def: "Postnatal stage that refers to a pig which is over 3 and under 4 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000074 ! 2-day-old stage (pig)
+relationship: part_of UBERON:0007221 ! neonate stage
+property_value: end_dpb "4.0" xsd:float
+property_value: start_dpb "3.0" xsd:float
[Term]
-id: UBERON:0004120
-name: mesoderm-derived structure
-namespace: uberon
-def: "An anatomical structure that develops (entirely or partially) from the mesoderm." [https://orcid.org/0000-0002-6601-2165]
-subset: grouping_class
-synonym: "mesodermal derivative" EXACT [FBbt:00025998]
-is_a: UBERON:0000061 ! anatomical structure
-intersection_of: UBERON:0000061 ! anatomical structure
-intersection_of: develops_from UBERON:0000926 ! mesoderm
-relationship: develops_from UBERON:0000926 ! mesoderm
-property_value: curator_notes "Grouping term for query purposes" xsd:string
+id: SscrDv:0000076
+name: 4-day-old stage (pig)
+namespace: pig_developmental_stage
+def: "Postnatal stage that refers to a pig which is over 4 and under 5 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000075 ! 3-day-old stage (pig)
+relationship: part_of UBERON:0007221 ! neonate stage
+property_value: end_dpb "5.0" xsd:float
+property_value: start_dpb "4.0" xsd:float
[Term]
-id: UBERON:0004121
-name: ectoderm-derived structure
-namespace: uberon
-def: "An anatomical structure that develops (entirely or partially) from the ectoderm." [https://orcid.org/0000-0002-6601-2165]
-subset: grouping_class
-synonym: "ectodermal deriviative" EXACT [FBbt:00025990]
-is_a: UBERON:0000061 ! anatomical structure
-intersection_of: UBERON:0000061 ! anatomical structure
-intersection_of: develops_from UBERON:0000924 ! ectoderm
-relationship: develops_from UBERON:0000924 ! ectoderm
-property_value: curator_notes "Grouping term for query purposes" xsd:string
+id: SscrDv:0000077
+name: 5-day-old stage (pig)
+namespace: pig_developmental_stage
+def: "Postnatal stage that refers to a pig which is over 5 and under 6 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000076 ! 4-day-old stage (pig)
+relationship: part_of UBERON:0007221 ! neonate stage
+property_value: end_dpb "6.0" xsd:float
+property_value: start_dpb "5.0" xsd:float
[Term]
-id: UBERON:0004288
-name: skeleton
-namespace: http://www.xspan.org/obo.owl#
-namespace: uberon
-def: "Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body." [VSAO:0000026]
-subset: efo_slim
-subset: human_reference_atlas
-subset: pheno_slim
-subset: uberon_slim
-synonym: "set of all bones" EXACT []
-synonym: "set of bones of body" EXACT []
-xref: AEO:0000168
-xref: EHDAA2:0001843
-xref: EHDAA:5047
-xref: EMAPA:17213
-xref: FMA:23875
-xref: GAID:177
-xref: galen:Skeleton
-xref: MA:0003006
-xref: MAT:0000032
-xref: MESH:D012863
-xref: MIAA:0000032
-xref: SCTID:361378004
-xref: VSAO:0000026
-xref: Wikipedia:Skeleton
-xref: XAO:0004053
-is_a: UBERON:0034925 ! anatomical collection
-relationship: has_member UBERON:0004765 ! skeletal element
-relationship: mutually_spatially_disjoint_with UBERON:0000383 ! musculature of body
-relationship: part_of UBERON:0001434 ! skeletal system
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
-property_value: external_definition "Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000026", ontology="VSAO", source="GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070"}
-property_value: has_relational_adjective "skeletal" xsd:string
-property_value: IAO:0000589 "skeleton (AEO)" xsd:string
-property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/The-skeletal-system" xsd:anyURI
+id: SscrDv:0000078
+name: 6-day-old stage (pig)
+namespace: pig_developmental_stage
+def: "Postnatal stage that refers to a pig which is over 6 and under 7 days old." [Bgee:curator]
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000077 ! 5-day-old stage (pig)
+relationship: part_of UBERON:0007221 ! neonate stage
+property_value: end_dpb "7.0" xsd:float
+property_value: start_dpb "6.0" xsd:float
[Term]
-id: UBERON:0004707
-name: pharyngula stage
-namespace: uberon
-def: "A stage that follows the blastula, gastrula and neurula stages. At the pharyngula stage, all vertebrate embryos show remarkable similarities." [Wikipedia:Pharyngula]
-subset: efo_slim
+id: SscrDv:0000079
+name: early embryonic stage (pig)
+namespace: pig_developmental_stage
+def: "Prenatal stage that starts at fertilization time and ends at about days 45 of gestation, when fetal weight gain accelerates." [Bgee:curator]
+comment: We define pig early and late embryonic stages based on fetal growth (see https://www.ncbi.nlm.nih.gov/pubmed/15446468). Pig embryo begins to attach to the uterus on days 13–14 of pregnancy (see https://embryology.med.unsw.edu.au/embryology/index.php/Pig_Development#Normal_Stages). At that stage, this is a 6-somite pig embryo (see https://embryology.med.unsw.edu.au/embryology/index.php/Book_-_Embryology_of_the_Pig_5).
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000068 ! embryo stage
+property_value: end_dpf "45.0" xsd:float
+property_value: start_dpf "0.0" xsd:float
+
+[Term]
+id: SscrDv:0000081
+name: ridge limb stage (pig)
+namespace: pig_developmental_stage
+def: "Pig fetal stage when the developing limb begins to grow out from the flank." [Bgee:curator]
+comment: This stage is defined at embryonic day 20 during pig development (see https://www.ncbi.nlm.nih.gov//pubmed/28335721).
+subset: granular_stage
subset: life_stage
-synonym: "pharyngula" RELATED []
-synonym: "phylotypic stage" EXACT []
-xref: DrerDO:0000052
-xref: EFO:0001310
-xref: OGES:000006
-xref: Wikipedia:Pharyngula
-xref: ZFS:0000050
is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
relationship: part_of UBERON:0000111 ! organogenesis stage
-relationship: preceded_by UBERON:0000110 ! neurula stage
-property_value: taxon_notes "Corresponds to E7-E11 in Mouse (Galis et al, TREE, 2001)" xsd:string
[Term]
-id: UBERON:0004716
-name: conceptus
-namespace: http://www.xspan.org/obo.owl#
-namespace: uberon
-def: "The embryo and its adnexa (appendages or adjunct parts) or associated membranes (i.e. the products of conception) The conceptus includes all structures that develop from the zygote, both embryonic and extraembryonic. It includes the embryo as well as the embryonic part of the placenta and its associated membranes - amnion, chorion (gestational sac), and yolk sac[WP]." [BTO:0003834, Wikipedia:Conceptus]
-synonym: "embryo plus adnexa" EXACT []
-xref: AEO:0000194
-xref: BTO:0003834
-xref: EHDAA2:0000001
-xref: EHDAA2:0003235
-xref: EMAPA:36040
-xref: NCIT:C34131
-xref: UMLS:C1516779 {source="ncithesaurus:Conceptus"}
-xref: Wikipedia:Conceptus
-is_a: UBERON:0000061 ! anatomical structure
-relationship: develops_from CL:0000365 ! animal zygote
-relationship: existence_ends_with UBERON:0000068 ! embryo stage
-relationship: existence_starts_with UBERON:0000068 ! embryo stage
-relationship: has_part UBERON:0002050 ! embryonic structure
-relationship: has_part UBERON:0016887 ! entire extraembryonic component
-property_value: editor_note "EHDAA2 places this as a subtype of organism. This leads to the inference that a conceptus is an embryo (if an embryo is defined as an organism at embryo stage), which eliminates the embryonic + extra-embryonic = conceptus" xsd:string
-property_value: IAO:0000589 "conceptus (AEO)" xsd:string
+id: SscrDv:0000082
+name: bud limb stage (pig)
+namespace: pig_developmental_stage
+def: "Pig fetal stage when the developing limb looks like a semicircle that is as long as it is wide." [Bgee:curator]
+comment: This stage is defined at embryonic day 22 during pig development (see https://www.ncbi.nlm.nih.gov//pubmed/28335721).
+subset: granular_stage
+subset: life_stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000081 ! ridge limb stage (pig)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: UBERON:0004728
-name: amphibian larval stage
-namespace: uberon
-def: "Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they metamorphose into the adult form." [GO:0002117]
+id: SscrDv:0000083
+name: paddle limb stage (pig)
+namespace: pig_developmental_stage
+def: "Pig fetal stage when the developing limb looks like a hand-plate." [Bgee:curator]
+comment: This stage is defined at embryonic day 26 during pig development (see https://www.ncbi.nlm.nih.gov//pubmed/28335721).
+subset: granular_stage
subset: life_stage
-synonym: "larva" RELATED [XAO:1000008]
-synonym: "larva stage" BROAD []
-synonym: "polliwog" NARROW SENSU [Wikipedia:Larva]
-synonym: "polliwog stage" NARROW SENSU [Wikipedia:Larva]
-synonym: "tadpole" NARROW SENSU [Wikipedia:Larva]
-synonym: "tadpole stage" NARROW SENSU [Wikipedia:Larva]
-xref: XtroDO:0000056
-is_a: UBERON:0000069 ! larval stage
-relationship: in_taxon NCBITaxon:8292 ! Amphibia
-relationship: present_in_taxon NCBITaxon:8355
-relationship: simultaneous_with GO:0002117 ! amphibian larval development
-property_value: external_ontology_notes "the XAO class denotes a stage" xsd:string {external_ontology="XAO"}
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/534" xsd:anyURI
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by SscrDv:0000082 ! bud limb stage (pig)
+relationship: part_of UBERON:0000111 ! organogenesis stage
[Term]
-id: UBERON:0004729
-name: nematode larval stage
+id: UBERON:0000000
+name: processual entity
namespace: uberon
-def: "Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew." [GO:0002119]
-subset: life_stage
-xref: WBls:0000023
-is_a: UBERON:0000069 ! larval stage
-relationship: in_taxon NCBITaxon:6231 ! Nematoda
-relationship: simultaneous_with GO:0002119 ! nematode larval development
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/567" xsd:anyURI
+def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity]
+subset: common_anatomy
+subset: upper_level
+xref: BFO:0000003
+is_a: BFO:0000003 ! occurrent
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
[Term]
-id: UBERON:0004730
-name: instar larval stage
+id: UBERON:0000025
+name: tube
namespace: uberon
-def: "This begins with the newly hatched first-instar larva, through its maturation to the end of the last larval stage. An example of this process is found in Drosophila melanogaster." [GO:0002168]
-subset: life_stage
-xref: FBdv:00005336
-is_a: UBERON:0000069 ! larval stage
-relationship: in_taxon NCBITaxon:50557 ! Insecta
-relationship: present_in_taxon NCBITaxon:7227 ! Drosophila melanogaster
-relationship: simultaneous_with GO:0002168 ! instar larval development
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/526" xsd:anyURI
+def: "Any hollow cylindrical anatomical structure containing a lumen through which substances are transported." [http://orcid.org/0000-0002-6601-2165]
+synonym: "anatomical tube" EXACT []
+synonym: "duct" NARROW []
+xref: galen:Tube
+is_a: UBERON:0004111 ! anatomical conduit
+intersection_of: UBERON:0004111 ! anatomical conduit
+intersection_of: has_quality PATO:0002299 ! tubular
+relationship: has_part UBERON:0013522 ! subdivision of tube
+relationship: has_quality PATO:0002299 ! tubular
+property_value: curator_notes "not every anatomical conduit is a tube - for example, a bone foramen is an opening in the bone, and there is no distinct separate tube structure. Tubes may transport large mixed objects (for example, a bolus of food in the digestive tube) or they may transport the secretions of a single gland (for example, gland ducts)" xsd:string
+property_value: has_relational_adjective "tubular" xsd:string
[Term]
-id: UBERON:0004734
-name: gastrula
+id: UBERON:0000058
+name: duct
namespace: uberon
-alt_id: UBERON:0007012
-def: "Organism at the gastrula stage." [Wikipedia:Gastrula, Wikipedia:Trilaminar_blastocyst]
-subset: pheno_slim
-synonym: "blastocystis trilaminaris" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "gastrula embryo" EXACT [BILA:0000060]
-synonym: "tri-laminar disc" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "tri-laminar disk" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar blastocyst" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar blastoderm" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar disc" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar disk" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "trilaminar germ" RELATED [https://orcid.org/0000-0002-6601-2165]
-xref: BILA:0000060
-xref: BTO:0001403
-xref: FBbt:00005317 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:293108
-xref: GAID:1302
-xref: MESH:D005775
-xref: MIAA:0000179
-xref: NCIT:C34057
-xref: NCIT:C34058
-xref: UMLS:C0017199 {source="ncithesaurus:Gastrula"}
-xref: UMLS:C1284022 {source="ncithesaurus:Trilaminar_Embryonic_Disc"}
-xref: Wikipedia:Gastrula
-xref: Wikipedia:Trilaminar_blastocyst
-is_a: UBERON:0000922 ! embryo
-intersection_of: UBERON:0000468 ! multicellular organism
-intersection_of: existence_starts_and_ends_during UBERON:0000109 ! gastrula stage
-relationship: develops_from UBERON:0000307 ! blastula
-relationship: existence_starts_and_ends_during UBERON:0000109 ! gastrula stage
-property_value: external_ontology_notes "We explicitly merge the NCITA terms here" xsd:string {external_ontology="NCIT"}
+def: "A tubular structure that transports secreted or excreted substances." [http://orcid.org/0000-0002-6601-2165, http://www.siumed.edu/~dking2/intro/glands.htm#ducts]
+subset: grouping_class
+synonym: "anatomical duct" EXACT []
+synonym: "ducts" RELATED OMO:0003004 [XAO:0004000]
+synonym: "exocrine duct" NARROW []
+synonym: "exocrine gland duct" NARROW []
+xref: AAO:0011123
+xref: FBbt:00100314 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:30320
+xref: galen:Duct
+xref: NCIT:C12948
+xref: SCTID:91726008
+xref: TAO:0005171
+xref: UMLS:C0687028 {source="ncithesaurus:Duct"}
+xref: Wikipedia:Duct_(anatomy)
+xref: XAO:0004000
+xref: ZFA:0005171
+is_a: UBERON:0000063 ! organ subunit
+relationship: conduit_for UBERON:0000463 ! organism substance
+relationship: has_part UBERON:0034969 ! epithelial layer of duct
+relationship: has_quality PATO:0002299 ! tubular
+property_value: external_definition "A tube shaped portion of tissue lined with epithelial cells that collects secretions and routes them to their destination[ZFA:0005171]." xsd:string {source="ZFA:0005171"}
+property_value: external_ontology_notes "Most ducts, but not all, are exocrine gland ducts. Some ontologies classify structures such as the oviduct here." xsd:string
[Term]
-id: UBERON:0004765
-name: skeletal element
+id: UBERON:0000060
+name: anatomical wall
namespace: uberon
-def: "Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles." [https://orcid.org/0000-0002-6601-2165]
-subset: organ_slim
-subset: uberon_slim
-xref: AAO:0011129
-xref: galen:SkeletalStructure
-xref: TAO:0001890
-xref: VSAO:0000128
-xref: XAO:0004012
-xref: ZFA:0005494
-is_a: UBERON:0000062 ! organ
-relationship: part_of UBERON:0001434 {source="VSAO"} ! skeletal system
-property_value: external_definition "Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000128", ontology="VSAO", source="PSPUB:0000170"}
-property_value: external_definition "Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001890", ontology="TAO", source="TAO:VSAO_workshop"}
+alt_id: UBERON:0009915
+def: "Organ component adjacent to an organ cavity and which consists of a maximal aggregate of organ component layers." [FMA:82482]
+subset: upper_level
+synonym: "organ wall" RELATED [FMA:82482]
+synonym: "wall" BROAD []
+synonym: "wall of organ" EXACT [FMA:82482]
+xref: FMA:82482
+xref: galen:Wall
+is_a: UBERON:0000064 ! organ part
+relationship: adjacent_to UBERON:0002553 ! anatomical cavity
+relationship: has_part UBERON:0004923 ! organ component layer
+property_value: external_ontology_notes "in FMA, serosa is a wall" xsd:string {external_ontology="FMA"}
[Term]
-id: UBERON:0004770
-name: articular system
+id: UBERON:0000061
+name: anatomical structure
namespace: uberon
-def: "Anatomical system that consists of all the joints of the body." [VSAO:0000181]
-synonym: "joint system" EXACT [FMA:23878]
-synonym: "set of all joints" RELATED []
-synonym: "set of all joints of body" EXACT [FMA:23878]
-synonym: "set of joints of body" RELATED [FMA:23878]
-xref: EMAPA:35150
-xref: FMA:23878
-xref: MA:0003007
-xref: SCTID:361827000
-xref: VSAO:0000181
-is_a: UBERON:0034925 ! anatomical collection
-intersection_of: UBERON:0034925 ! anatomical collection
-intersection_of: has_member UBERON:0000982 ! skeletal joint
-relationship: existence_ends_during UBERON:0000066 ! fully formed stage
-relationship: functionally_related_to GO:0040011 ! locomotion
-relationship: has_member UBERON:0000982 ! skeletal joint
-relationship: in_taxon NCBITaxon:33213 ! Bilateria
-relationship: part_of UBERON:0001434 {source="FMA"} ! skeletal system
+def: "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome." [CARO:0000003]
+subset: common_anatomy
+subset: upper_level
+synonym: "biological structure" EXACT []
+synonym: "connected biological structure" EXACT [CARO:0000003]
+xref: AAO:0010825
+xref: AEO:0000003
+xref: BILA:0000003
+xref: CARO:0000003
+xref: EHDAA2:0003003
+xref: EMAPA:0
+xref: FBbt:00007001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:305751
+xref: FMA:67135
+xref: GAID:781
+xref: HAO:0000003
+xref: http://dbpedia.org/ontology/AnatomicalStructure
+xref: MA:0003000
+xref: MESH:D000825
+xref: SCTID:362889002
+xref: TAO:0000037
+xref: TGMA:0001823
+xref: VHOG:0001759
+xref: XAO:0003000
+xref: ZFA:0000037
+is_a: UBERON:0000465 ! material anatomical entity
+relationship: existence_ends_during_or_before UBERON:0000071 ! death stage
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: IAO:0000589 "anatomical structure (AEO)" xsd:string
[Term]
-id: UBERON:0004880
-name: chordamesoderm
+id: UBERON:0000062
+name: organ
namespace: uberon
-def: "The central region of trunk mesoderm. This tissue forms the notochord." [https://orcid.org/0000-0002-6601-2165]
-subset: efo_slim
-subset: pheno_slim
-synonym: "axial chorda mesoderm" EXACT [ZFA:0000091]
-synonym: "chorda mesoderm" EXACT []
-synonym: "dorsal mesoderm" EXACT [https://github.com/obophenotype/uberon/wiki/The-neural-crest]
-synonym: "presumptive notochord" EXACT [ZFA:0000091]
-xref: AAO:0000478
-xref: EFO:0003426
-xref: TAO:0000091
-xref: ZFA:0000091
-is_a: UBERON:0002050 ! embryonic structure
-relationship: in_taxon NCBITaxon:7711 ! Chordata
-relationship: part_of UBERON:0003068 ! axial mesoderm
-property_value: external_definition "Notochord rudiment[ZFIN:ZDB-PUB-961014-576]." xsd:string {source="ZFIN:ZDB-PUB-961014-576"}
-property_value: external_ontology_notes "WP treats this as synonym of axial mesoderm. Induces neural tube. Gilbert: contains an anterior head process and the notochord." xsd:string
+def: "Anatomical structure that performs a specific function or group of functions [WP]." [Wikipedia:Organ_(anatomy)]
+subset: common_anatomy
+subset: upper_level
+synonym: "anatomical unit" RELATED []
+synonym: "body organ" RELATED []
+synonym: "element" RELATED [http://orcid.org/0000-0002-6601-2165]
+xref: BIRNLEX:4
+xref: CARO:0020004
+xref: EFO:0000634
+xref: EMAPA:35949
+xref: ENVO:01000162
+xref: FMA:67498
+xref: MA:0003001
+xref: NCIT:C13018
+xref: SCTID:272625005
+xref: UMLS:C0178784 {source="ncithesaurus:Organ"}
+xref: WBbt:0003760
+xref: Wikipedia:Organ_(anatomy)
+is_a: UBERON:0010000 ! multicellular anatomical structure
+relationship: capable_of GO:0008150 ! biological_process
+relationship: has_boundary UBERON:0006984 ! anatomical surface
+relationship: never_in_taxon NCBITaxon:110815 {source="Wikipedia"}
+relationship: part_of UBERON:0000467 ! anatomical system
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: external_definition "Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions." xsd:string {source="GO:0048513"}
+property_value: external_ontology_notes "CARO v1 does not include a generic 'organ' class, only simple and compound organ. CARO v2 may include organ, see https://github.com/obophenotype/caro/issues/4" xsd:string
[Term]
-id: UBERON:0004905
-name: articulation
+id: UBERON:0000063
+name: organ subunit
namespace: uberon
-def: "Anatomical structure that connects two or more adjacent skeletal elements or hardened body parts." [http://orcid.org/0000-0002-6601-2165]
-subset: grouping_class
-synonym: "joint" NARROW []
-xref: FBbt:00005811 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-is_a: UBERON:0034921 ! multi organ part structure
-relationship: part_of UBERON:0004770 ! articular system
+def: "A part of an organ that constitutes a distinct modular sub-unit. In some cases, the organ may also contain other sub-units of identical or similar types, in other cases this may be a distinct entity." [http://orcid.org/0000-0002-6601-2165]
+subset: upper_level
+synonym: "organ region with fixed fiat boundary" RELATED [FMA:86140]
+synonym: "organ segment" RELATED [FMA:86140]
+synonym: "segment of organ" RELATED [FMA:86140]
+xref: FMA:86140
+is_a: UBERON:0000064 ! organ part
+property_value: editor_note "FMA distinguishes segment from zone by whether the fiat boundaries are fixed/anchored (segments) or floating (zone). It's not completely clear how to apply this distinction" xsd:string
+property_value: external_definition "Organ region with one or more anchored fiat boundaries. Examples: artery, trunk of nerve, cervical part of esophagus, pelvic part of vagina, horn of thyroid cartilage, anterior segment of eyeball." xsd:string {source="FMA:86140", version="3"}
+property_value: external_definition "Organ region with one or more fixed or anchored fiat boundaries. Examples: artery, trunk of nerve, cervical part of esophagus, pelvic part of vagina, horn of thyroid cartilage, anterior segment of eyebal." xsd:string {source="FMA:86140", version="1"}
[Term]
-id: UBERON:0004921
-name: subdivision of digestive tract
+id: UBERON:0000064
+name: organ part
namespace: uberon
-def: "A proximal-distal subdivision of the digestive tract." [http://orcid.org/0000-0002-6601-2165]
-subset: human_reference_atlas
+def: "A multicellular structure that is a part of an organ." [http://orcid.org/0000-0002-6601-2165]
+subset: common_anatomy
+subset: efo_slim
subset: non_informative
-synonym: "alimentary system subdivision" RELATED [FMA:71131]
-synonym: "gut section" RELATED [FBbt:00100315]
-synonym: "intestinal tract" RELATED []
-synonym: "segment of intestinal tract" RELATED []
-synonym: "subdivision of alimentary system" RELATED [FMA:71131]
-xref: FBbt:00100315 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:71131
-is_a: UBERON:0013522 ! subdivision of tube
-intersection_of: UBERON:0013522 ! subdivision of tube
-intersection_of: subdivision_of UBERON:0001555 ! digestive tract
-relationship: part_of UBERON:0001555 ! digestive tract
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
-relationship: subdivision_of UBERON:0001555 ! digestive tract
-property_value: curator_notes "intended to denote both embryonic and adult structures. Note the FMA grouping here is not quite correct." xsd:string
-
-[Term]
-id: UBERON:0004923
-name: organ component layer
-namespace: uberon
-def: "A part of a wall of an organ that forms a layer." [http://orcid.org/0000-0002-6601-2165]
subset: upper_level
-xref: FMA:82485
-is_a: UBERON:0000064 ! organ part
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0000060 ! anatomical wall
+synonym: "cardinal organ part" EXACT [FMA:82472]
+synonym: "regional part of organ" RELATED [BIRNLEX:16]
+xref: AAO:0011124
+xref: BIRNLEX:16
+xref: EFO:0000635
+xref: FMA:82472
+xref: SCTID:113343008
+xref: SCTID:91717005
+is_a: UBERON:0010000 ! multicellular anatomical structure
+relationship: part_of UBERON:0000062 ! organ
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: curator_notes "currently defined in a very broad sense, may be replaced by more specific classes in the future" xsd:string
[Term]
-id: UBERON:0005068
-name: neural rod
+id: UBERON:0000066
+name: fully formed stage
namespace: uberon
-def: "A solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts[GO]. An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube[ZFIN]." [GO:0014024, ZFA:0000133]
+def: "The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both sexually immature stage, and adult stage." [https://orcid.org/0000-0002-6601-2165]
subset: efo_slim
-synonym: "neural tube rod" RELATED [GO:0014027]
-xref: EFO:0003498
-xref: TAO:0000133
-xref: ZFA:0000133
-is_a: UBERON:0016879 ! future central nervous system
-relationship: develops_from UBERON:0007135 ! neural keel
-property_value: external_definition "An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000133", ontology="TAO", source="ZFIN:curator"}
+subset: life_stage
+synonym: "adult stage" BROAD []
+synonym: "fully formed animal stage" EXACT []
+synonym: "juvenile-adult stage" EXACT []
+xref: BilaDO:0000004
+xref: BTO:0001043
+xref: EFO:0001272
+xref: FBdv:00005369
+xref: HsapDv:0010000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000092 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:BtauDv_0000078 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CfamDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DpseDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DsimDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:EcabDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:FcatDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000076 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000032 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000052 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OanaDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000024 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000041 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000052 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000061 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000040 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000084 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: WBls:0000041
+xref: XtroDO:0000084
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000092 ! post-embryonic stage
+relationship: preceded_by UBERON:0000111 ! organogenesis stage
+relationship: precedes UBERON:0000071 ! death stage
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/566" xsd:anyURI
[Term]
-id: UBERON:0005090
-name: muscle structure
+id: UBERON:0000068
+name: embryo stage
namespace: uberon
-def: "Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO]." [GO:0061061]
-synonym: "muscle" RELATED []
-synonym: "muscle element" RELATED []
-synonym: "musculus" EXACT [FMA:30316]
-xref: FMA:30316
-is_a: UBERON:0000061 ! anatomical structure
-relationship: has_part CL:0000187 ! muscle cell
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-property_value: curator_notes "in some organisms such as drosophila, muscles can be single cells. This class groups together all discrete muscle elements, from multicellular muscle organs in vertebrates, to individual single-cell muscles in drisophila" xsd:string
+def: "A life cycle stage that starts with fertilization and ends with the fully formed embryo." [http://orcid.org/0000-0002-6601-2165]
+subset: life_stage
+synonym: "embryogenesis" RELATED []
+synonym: "embryonic stage" EXACT []
+xref: BilaDO:0000002
+xref: EV:0300001
+xref: FBdv:00005289
+xref: FMA:72652
+xref: HsapDv:0000045 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000042 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:AcarDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:BtauDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CfamDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CporDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DpseDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DsimDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:EcabDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:FcatDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OanaDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OcunDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000000
+xref: OGES:000022
+xref: SCTID:296280003
+xref: WBls:0000003
+xref: WBls:0000092
+xref: WBls:0000102
+xref: XAO:1000012
+is_a: UBERON:0000105 ! life cycle stage
+relationship: precedes UBERON:0000066 ! fully formed stage
+relationship: precedes UBERON:0000092 ! post-embryonic stage
+relationship: simultaneous_with GO:0009790 ! embryo development
[Term]
-id: UBERON:0005291
-name: embryonic tissue
+id: UBERON:0000069
+name: larval stage
namespace: uberon
-def: "A portion of tissue that is part of an embryo." [OBOL:automatic]
-subset: pheno_slim
-subset: upper_level
-synonym: "developing tissue" RELATED []
-synonym: "portion of embryonic tissue" EXACT [OBOL:automatic]
-xref: CALOHA:TS-2100
-is_a: UBERON:0000479 ! tissue
-intersection_of: UBERON:0000479 ! tissue
-intersection_of: part_of UBERON:0000922 ! embryo
-relationship: part_of UBERON:0002050 ! embryonic structure
+def: "A distinct juvenile stage many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle." [Wikipedia:Larva]
+subset: efo_slim
+subset: life_stage
+synonym: "ammocoete" NARROW SENSU [Wikipedia:Larva]
+synonym: "ammocoete stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "bipinnaria" NARROW SENSU [Wikipedia:Larva]
+synonym: "bipinnaria stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "caterpillar" NARROW SENSU [Wikipedia:Larva]
+synonym: "caterpillar stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "glochidium" NARROW SENSU [Wikipedia:Larva]
+synonym: "glochidium stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "grub" NARROW SENSU [Wikipedia:Larva]
+synonym: "grub stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "larva" RELATED []
+synonym: "larva stage" EXACT []
+synonym: "leptocephalus" NARROW SENSU [Wikipedia:Larva]
+synonym: "leptocephalus stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "maggot" NARROW SENSU [Wikipedia:Larva]
+synonym: "maggot stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "metacestode" NARROW SENSU [BTO:0000859]
+synonym: "naiad, nymph" NARROW SENSU [Wikipedia:Larva]
+synonym: "naiad, nymph stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "nauplius" NARROW SENSU [Wikipedia:Larva]
+synonym: "nauplius stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "nymph" NARROW SENSU [Wikipedia:Larva]
+synonym: "nymph stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "planula" NARROW SENSU [Wikipedia:Larva]
+synonym: "planula stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "tornaria" NARROW SENSU [NCBITaxon:10219]
+synonym: "trochophore" NARROW SENSU [Wikipedia:Larva]
+synonym: "trochophore stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "veliger" NARROW SENSU [Wikipedia:Larva]
+synonym: "veliger stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "wriggler" NARROW SENSU [Wikipedia:Larva]
+synonym: "wriggler stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "zoea" NARROW SENSU [Wikipedia:Larva]
+synonym: "zoea stage" NARROW SENSU [Wikipedia:Larva]
+xref: BTO:0000915
+xref: BTO:0000954
+xref: EFO:0001303
+xref: MIAA:0000400
+xref: obo:DpseDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DsimDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000039 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000008
+xref: Wikipedia:Larva
+xref: ZFS:0000048
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by UBERON:0000068 ! embryo stage
+relationship: never_in_taxon NCBITaxon:32524 ! Amniota
+relationship: part_of UBERON:0000092 ! post-embryonic stage
+relationship: simultaneous_with GO:0002164 ! larval development
+property_value: curator_notes "Uberon includes clade-specific subclasses, e.g. nematod larva" xsd:string
+property_value: taxon_notes "It is a misunderstanding that the larval form always reflects the group's evolutionary history. It could be the case, but often the larval stage has evolved secondarily, as in insects. In these cases the larval form might differ more from the group's common origin than the adult form" xsd:string {source="WP"}
[Term]
-id: UBERON:0005423
-name: developing anatomical structure
-namespace: http://www.xspan.org/obo.owl#
+id: UBERON:0000070
+name: pupal stage
namespace: uberon
-alt_id: UBERON:0005423
-def: "A structure whose morphology or state of differentiation will change during normal development." [AEO:JB]
-subset: common_anatomy
-synonym: "developing structure" RELATED []
-synonym: "developmental structure" RELATED []
-synonym: "developmental tissue" RELATED [MIAA:0000019]
-xref: AEO:0000125
-xref: CALOHA:TS-2122
-xref: EHDAA2:0003125
-xref: FBbt:00007006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:292313
-xref: MIAA:0000019
-is_a: CARO:0000003 ! anatomical structure
-is_a: UBERON:0000465 ! material anatomical entity
-relationship: capable_of GO:0032502 ! developmental process
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: IAO:0000589 "developing anatomical structure (AEO)" xsd:string
+def: "A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis." [https://github.com/obophenotype/uberon/issues/562, Wikipedia:Pupa]
+subset: life_stage
+synonym: "aurelia stage" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
+synonym: "chrysalides stage" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
+synonym: "chrysalis stage" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
+synonym: "pupa stage" EXACT []
+xref: FBdv:00005349
+xref: obo:DpseDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DsimDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: Wikipedia:Pupa
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by UBERON:0000069 ! larval stage
+relationship: in_taxon NCBITaxon:33392 ! Endopterygota
+relationship: part_of UBERON:0000092 ! post-embryonic stage
+relationship: simultaneous_with GO:0035209 {notes="may be better to model pupal development as including the pre-pupal stage"} ! pupal development
+property_value: dc:contributor https://github.com/ANiknejad
+property_value: dc:contributor https://github.com/cmungall
+property_value: dc:contributor https://github.com/dosumis
+property_value: dc:contributor https://github.com/fbastian
+property_value: dc:contributor https://github.com/mmc46
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/562" xsd:anyURI
+property_value: taxon_notes "The pupal stage is found only in holometabolous insects, those that undergo a complete metamorphosis, going through four life stages; embryo, larva, pupa and imago" xsd:string
[Term]
-id: UBERON:0005764
-name: acellular membrane
+id: UBERON:0000071
+name: death stage
namespace: uberon
-def: "An acellular anatomical structure that is the bounding layer of a anatomical structure." [OBOL:automatic]
+def: "End of the life of an organism." [XAO:0000437]
subset: common_anatomy
-xref: FMA:63871
-is_a: UBERON:0000476 ! acellular anatomical structure
-intersection_of: UBERON:0000476 ! acellular anatomical structure
-intersection_of: bounding_layer_of UBERON:0000061 ! anatomical structure
-relationship: bounding_layer_of UBERON:0000061 ! anatomical structure
-relationship: part_of UBERON:0000061 ! anatomical structure
+subset: life_stage
+synonym: "death" RELATED []
+xref: XAO:0000437
+xref: XtroDO:0000085
+is_a: UBERON:0000105 ! life cycle stage
+relationship: ends UBERON:0000104 ! life cycle
relationship: present_in_taxon NCBITaxon:33090
relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
relationship: present_in_taxon NCBITaxon:4751
+property_value: external_ontology_notes "ncit:Death is an outcome" xsd:string {external_ontology="ncit"}
[Term]
-id: UBERON:0005769
-name: basement membrane of epithelium
-namespace: uberon
-def: "An acellular membrane that is part of the epithelium, lies adjacent to the epithelial cells, and is the fusion of the the basal lamina and the reticular lamina." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Basement_membrane]
-synonym: "basement membrane" RELATED [FMA:63872]
-synonym: "basement membrane of connective tissue" EXACT [FMA:63872]
-synonym: "membrana basalis" EXACT OMO:0003011 [Wikipedia:Basement_membrane]
-xref: AAO:0010596
-xref: FMA:63872
-xref: GAID:915
-xref: NCIT:C13191
-xref: SCTID:68989006
-xref: UMLS:C0004799 {source="ncithesaurus:Basement_Membrane"}
-xref: Wikipedia:Basement_membrane
-is_a: UBERON:0005764 {source="FMA"} ! acellular membrane
-relationship: adjacent_to CL:0000066 ! epithelial cell
-relationship: composed_primarily_of GO:0005604 ! basement membrane
-relationship: has_part GO:0005587 ! collagen type IV trimer
-relationship: in_taxon NCBITaxon:33208 ! Metazoa
-relationship: part_of UBERON:0000483 ! epithelium
-relationship: present_in_taxon NCBITaxon:80999 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"}
-property_value: curator_notes "this class represents a continuous sheet of basement membrane which can underlie multiple epithelial cells over large regions. In contrast, the GO class 'basal membrane' represents a portion of substance on the scale of a single cell." xsd:string
-
-[Term]
-id: UBERON:0006267
-name: notochordal plate
-namespace: uberon
-def: "The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord." [VHOG:0001212]
-subset: emapa_ehdaa2
-xref: EHDAA2:0001278
-xref: EHDAA:264
-xref: EMAPA:16101
-xref: NCIT:C34231
-xref: UMLS:C1518429 {source="ncithesaurus:Notochordal_Plate"}
-xref: VHOG:0001212
-is_a: UBERON:0000490 {source="EHDAA2"} ! unilaminar epithelium
-is_a: UBERON:0002050 ! embryonic structure
-is_a: UBERON:0005291 ! embryonic tissue
-is_a: UBERON:0010371 ! ecto-epithelium
-relationship: develops_from UBERON:0006268 {source="EHDAA2"} ! notochordal process
-property_value: editor_note "TODO - check ordering; awaiting confirmation from JB" xsd:string
-property_value: external_definition "The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001212", ontology="VHOG", source="http://bgee.unil.ch/"}
-
-[Term]
-id: UBERON:0006268
-name: notochordal process
+id: UBERON:0000075
+name: subdivision of skeletal system
namespace: uberon
-def: "A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot." [http://www.med.umich.edu/lrc/coursepages/m1/embryology/embryo/05embryonicperiod.htm]
-comment: The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus.
-subset: emapa_ehdaa2
-synonym: "chordamesoderm" RELATED []
-synonym: "presumptive notochord" RELATED []
-xref: EHDAA2:0001279
-xref: EHDAA:224
-xref: EMAPA:16102
-xref: FMA:293135
-xref: NCIT:C34232
-xref: UMLS:C1518430 {source="ncithesaurus:Notochordal_Process"}
-xref: VHOG:0001213
-is_a: UBERON:0005423 ! developing anatomical structure
-relationship: develops_from UBERON:0000924 {source="EHDAA2"} ! ectoderm
+alt_id: UBERON:0010322
+def: "Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003]
+subset: non_informative
+synonym: "skeletal system part" RELATED []
+synonym: "skeletal system subdivision" EXACT [FMA:85544]
+xref: FMA:85544
+xref: galen:ComplexSkeletalStructure
+xref: NCIT:C34076
+xref: SCTID:118966000
+xref: UMLS:C1519343 {source="ncithesaurus:Skeletal_System_Part"}
+is_a: UBERON:0011216 {source="cjm"} ! organ system subdivision
+relationship: composed_primarily_of UBERON:0004765 ! skeletal element
relationship: in_taxon NCBITaxon:7711 ! Chordata
+relationship: part_of UBERON:0001434 ! skeletal system
[Term]
-id: UBERON:0006595
-name: presumptive endoderm
-namespace: uberon
-def: "Presumptive structure of the blastula that will develop into endoderm." [http://orcid.org/0000-0002-6601-2165]
-subset: efo_slim
-xref: AAO:0000471
-xref: EFO:0003437
-xref: TAO:0000416
-xref: ZFA:0000416
-is_a: UBERON:0006598 ! presumptive structure
-intersection_of: UBERON:0006598 ! presumptive structure
-intersection_of: has_potential_to_develop_into UBERON:0000925 ! endoderm
-intersection_of: part_of UBERON:0000307 ! blastula
-relationship: has_potential_to_develop_into UBERON:0000925 ! endoderm
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0000307 ! blastula
-
-[Term]
-id: UBERON:0006598
-name: presumptive structure
+id: UBERON:0000092
+name: post-embryonic stage
namespace: uberon
-def: "Portion of embryonic tissue determined by fate mapping to become a structure." [GOC:CVS, GOC:YMB, ZFA:0001116]
-synonym: "future structure" EXACT []
-synonym: "presumptive structures" EXACT [ZFA:0001116]
-xref: AAO:0000479
-xref: TAO:0001116
-xref: ZFA:0001116
-is_a: UBERON:0002050 ! embryonic structure
-intersection_of: UBERON:0005423 ! developing anatomical structure
-intersection_of: has_potential_to_develop_into UBERON:0000061 ! anatomical structure
-intersection_of: part_of UBERON:0000922 ! embryo
-relationship: has_potential_to_develop_into UBERON:0000061 ! anatomical structure
-property_value: editor_note "Consider merging with anlage" xsd:string
+def: "Stage succeeding embryo, including mature structure." [https://orcid.org/0000-0002-6601-2165]
+subset: life_stage
+synonym: "post-hatching stage" NARROW []
+synonym: "postembryonic" RELATED []
+synonym: "postembryonic stage" EXACT []
+xref: BilaDO:0000003
+xref: obo:SsalDv_0000038 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000010
+xref: OGES:000014
+xref: OGES:000024
+xref: WBls:0000022
+xref: WBls:0000093
+xref: WBls:0000103
+is_a: UBERON:0000105 ! life cycle stage
+relationship: preceded_by UBERON:0000068 ! embryo stage
+relationship: simultaneous_with GO:0009791 ! post-embryonic development
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/344" xsd:anyURI
+property_value: taxon_notes "In birds, the postnatal stage begins when the beak penetrates the shell (i.e., external pipping) (Brown et al. 1997)" xsd:string
[Term]
-id: UBERON:0006601
-name: presumptive ectoderm
+id: UBERON:0000104
+name: life cycle
namespace: uberon
-def: "Presumptive structure of the blastula that will develop into ectoderm." [http://orcid.org/0000-0002-6601-2165]
-subset: efo_slim
-synonym: "presumptive epidermis" RELATED [ZFA:0001376]
-xref: AAO:0000470
-xref: EFO:0003466
-xref: TAO:0001376
-xref: XAO:0004132
-xref: ZFA:0001376
-is_a: UBERON:0006598 ! presumptive structure
-intersection_of: UBERON:0006598 ! presumptive structure
-intersection_of: has_potential_to_develop_into UBERON:0000924 ! ectoderm
-intersection_of: part_of UBERON:0000307 ! blastula
-relationship: has_potential_to_develop_into UBERON:0000924 ! ectoderm
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0000307 ! blastula
+def: "An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism." [https://orcid.org/0000-0002-6601-2165]
+subset: common_anatomy
+subset: upper_level
+synonym: "entire life cycle" EXACT []
+synonym: "entire lifespan" EXACT []
+synonym: "life" EXACT []
+synonym: "lifespan" EXACT []
+xref: FBdv:00000000
+xref: HsapDv:0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: ncithesaurus:Life
+xref: obo:AcarDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:BtauDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CfamDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CporDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DpseDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DsimDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:EcabDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:FcatDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OanaDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OcunDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000011
+is_a: UBERON:0000000 ! processual entity
+relationship: ends_with UBERON:0000071 ! death stage
+relationship: has_part UBERON:0000105 ! life cycle stage
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/532" xsd:anyURI
[Term]
-id: UBERON:0006603
-name: presumptive mesoderm
+id: UBERON:0000105
+name: life cycle stage
namespace: uberon
-def: "Presumptive structure of the blastula that will develop into mesoderm." [http://orcid.org/0000-0002-6601-2165]
+def: "A spatiotemporal region encompassing some part of the life cycle of an organism." [https://orcid.org/0000-0002-6601-2165]
+subset: common_anatomy
subset: efo_slim
-xref: AAO:0000476
-xref: EFO:0003467
-xref: TAO:0001377
-xref: ZFA:0001377
-is_a: UBERON:0006598 ! presumptive structure
-intersection_of: UBERON:0006598 ! presumptive structure
-intersection_of: has_potential_to_develop_into UBERON:0000926 ! mesoderm
-intersection_of: part_of UBERON:0000307 ! blastula
-relationship: has_potential_to_develop_into UBERON:0000926 ! mesoderm
-relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
-relationship: part_of UBERON:0000307 ! blastula
+subset: life_stage
+subset: upper_level
+synonym: "developmental stage" NARROW []
+synonym: "stage" NARROW []
+xref: BILS:0000105
+xref: EFO:0000399
+xref: FBdv:00007012
+xref: FMA:24120
+xref: HsapDv:0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MESH:D008018
+xref: MmusDv:0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: ncithesaurus:Developmental_Stage
+xref: obo:AcarDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:BtauDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CfamDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CporDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DpseDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:DsimDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:EcabDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:FcatDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OanaDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OcunDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: PdumDv:0000090
+xref: WBls:0000002
+xref: XAO:1000000
+xref: ZFS:0000000
+xref: ZFS:0100000
+is_a: UBERON:0000000 ! processual entity
+relationship: part_of UBERON:0000104 ! life cycle
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: editor_note "this class represents a proper part of the life cycle of an organism. The class 'life cycle' should not be placed here" xsd:string
+property_value: external_ontology_notes "the WBls class 'all stages' belongs here as it is the superclass of other WBls stages" xsd:string
+property_value: external_ontology_notes "we map the ZFS unknown stage here as it is logically equivalent to saying *some* life cycle stage" xsd:string
[Term]
-id: UBERON:0006984
-name: anatomical surface
+id: UBERON:0000106
+name: zygote stage
namespace: uberon
-def: "A two dimensional anatomical structure that is the boundary between an anatomical structure and an anatomical substance, an anatomical space or the organism's environment. Examples include the surface of your skin, the surface of the lining of your gut; the surface of the endothelium of you aorta that is in contact with blood.n." [CARO:0001002]
-comment: Old definition: 'Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures.' Note, in the new definition, the space referred to is not necessarily an anatomical space. It may be the outside of an organism.
-subset: upper_level
-xref: BILA:0000010
-xref: CARO:0001002
-xref: EHDAA2_RETIRED:0003192
-xref: FMA:24137
-xref: NCIT:C34022
-xref: UMLS:C1515977 {source="ncithesaurus:Anatomic_Surface"}
-is_a: UBERON:0010199 {notes="via morphological boundary in CARO"} ! bona-fide anatomical boundary
+def: "A stage at which the organism is a single cell produced by means of sexual reproduction." [Wikipedia:Zygote]
+subset: efo_slim
+subset: life_stage
+synonym: "1-cell stage" EXACT []
+synonym: "fertilized egg stage" EXACT [BTO:0000854]
+synonym: "fertilized egg stage" RELATED []
+synonym: "one cell stage" EXACT []
+synonym: "one-cell stage" RELATED [VHOG:0000745]
+synonym: "zygote" RELATED [VHOG:0000745]
+synonym: "zygotum" RELATED OMO:0003011 [Wikipedia:Zygote]
+xref: BilaDO:0000005
+xref: BILS:0000106
+xref: EFO:0001322
+xref: EHDAA:27
+xref: FBdv:00005288
+xref: HsapDv:0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: IDOMAL:0000302 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0003-4423-4370", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
+xref: MmusDv:0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: NCIT:C12601
+xref: obo:OariDv_0000009 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000048 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000087 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: PdumDv:0000100
+xref: VHOG:0000745
+xref: Wikipedia:Zygote
+xref: XAO:1000001
+xref: ZFS:0000001
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000068 ! embryo stage
+relationship: seeAlso EMAPA:16033
+relationship: starts UBERON:0000104 ! life cycle
+property_value: homology_notes "As in all metazoans, eumetazoan development begins with a fertilized egg, or zygote.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000745", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.107", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:0007010
-name: cleaving embryo
+id: UBERON:0000107
+name: cleavage stage
namespace: uberon
-def: "Organism at the cleavage stage." [OBOL:automatic]
-xref: BILA:0000058
-is_a: UBERON:0000922 ! embryo
-intersection_of: UBERON:0000468 ! multicellular organism
-intersection_of: existence_ends_with UBERON:0000107 ! cleavage stage
-intersection_of: existence_starts_with UBERON:0000107 ! cleavage stage
-relationship: existence_ends_with UBERON:0000107 ! cleavage stage
-relationship: existence_starts_with UBERON:0000107 ! cleavage stage
+def: "The first few specialized divisions of an activated animal egg; Stage consisting of division of cells in the early embryo. The zygotes of many species undergo rapid cell cycles with no significant growth, producing a cluster of cells the same size as the original zygote. The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula." [GO:0040016, Wikipedia:Cleavage_(embryo)]
+subset: efo_slim
+subset: life_stage
+xref: BilaDO:0000006
+xref: BILS:0000107
+xref: EFO:0001290
+xref: FBdv:00000054
+xref: HsapDv:0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MESH:D002970
+xref: MmusDv:0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000064 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000010 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000049 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000088 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000015
+xref: OGES:000020
+xref: PdumDv:0000200
+xref: Wikipedia:Cleavage_(embryo)
+xref: XAO:1000004
+xref: ZFS:0000046
+is_a: UBERON:0000105 ! life cycle stage
+intersection_of: UBERON:0000105 ! life cycle stage
+intersection_of: simultaneous_with GO:0040016 ! embryonic cleavage
+relationship: immediately_preceded_by UBERON:0000106 ! zygote stage
+relationship: part_of UBERON:0000068 ! embryo stage
+relationship: simultaneous_with GO:0040016 ! embryonic cleavage
[Term]
-id: UBERON:0007026
-name: presumptive gut
+id: UBERON:0000108
+name: blastula stage
namespace: uberon
-synonym: "embryonic digestive tube" RELATED []
-synonym: "future digestive tract" EXACT []
-synonym: "future digestive tube" EXACT []
-synonym: "future gut" EXACT []
-synonym: "primitive gut" EXACT []
-synonym: "primordial digestive tube" RELATED []
-synonym: "primordial gut" RELATED []
-xref: BILA:0000084
-xref: NCIT:C34268
-xref: SCTID:360394002
-xref: UMLS:C1514442 {source="ncithesaurus:Primordial_Gut"}
-is_a: UBERON:0006598 ! presumptive structure
-intersection_of: UBERON:0006598 ! presumptive structure
-intersection_of: has_potential_to_develop_into UBERON:0001555 ! digestive tract
-relationship: existence_starts_during UBERON:0000109 ! gastrula stage
-relationship: has_developmental_contribution_from UBERON:0000925 ! endoderm
-relationship: has_developmental_contribution_from UBERON:0000926 ! mesoderm
-relationship: has_potential_to_develop_into UBERON:0001555 ! digestive tract
-property_value: development_notes "The endodermal cells generate only the lining of the digestive tube and its glands; mesodermal mesenchyme cells will surround this tube to provide the muscles for peristalsis" xsd:string {source="NCBIBook:NBK10107"}
+def: "An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence." [Wikipedia:Blastula]
+subset: efo_slim
+subset: life_stage
+xref: BilaDO:0000007
+xref: BILS:0000108
+xref: EFO:0001282
+xref: HsapDv:0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000091 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000025 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000054 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000012 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000089 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000003
+xref: OGES:000016
+xref: OGES:000021
+xref: WBls:0000005
+xref: Wikipedia:Blastula
+xref: XAO:1000003
+xref: ZFS:0000045
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000068 ! embryo stage
+relationship: preceded_by UBERON:0000107 ! cleavage stage
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png" xsd:anyURI
+property_value: editor_note "consider adding a preceding stage 'morula stage' as part of cleavage" xsd:string
[Term]
-id: UBERON:0007135
-name: neural keel
+id: UBERON:0000109
+name: gastrula stage
namespace: uberon
-def: "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section." [ZFIN:ZDB-PUB-961014-576]
+def: "A stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm." [GO:0007369]
subset: efo_slim
-synonym: "presumptive central nervous system" RELATED [ZFA:0000131]
-xref: EFO:0003497
-xref: TAO:0000131
-xref: ZFA:0000131
-is_a: UBERON:0016879 ! future central nervous system
-relationship: develops_from UBERON:0003075 ! neural plate
-property_value: external_definition "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000131", ontology="TAO", source="ZFIN:curator"}
+subset: life_stage
+synonym: "blastocystis trilaminaris stage" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar blastocyst stage" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar blastoderm stage" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar disk stage" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar germ stage" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar stage" RELATED [https://orcid.org/0000-0002-6601-2165]
+xref: BilaDO:0000008
+xref: BILS:0000109
+xref: EFO:0001296
+xref: FBdv:00005317
+xref: HsapDv:0000010 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000013 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000092 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000026 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000016 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000090 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000004
+xref: OGES:000019
+xref: WBls:0000010
+xref: XAO:1000005
+xref: ZFS:0000047
+is_a: UBERON:0000105 ! life cycle stage
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0000068 ! embryo stage
+relationship: preceded_by UBERON:0000108 {source="BILS"} ! blastula stage
+relationship: simultaneous_with GO:0007369 ! gastrulation
[Term]
-id: UBERON:0007220
-name: late embryonic stage
+id: UBERON:0000110
+name: neurula stage
namespace: uberon
-def: "An embryo stage that covers late steps of the embryogenesis with a fully formed embryo still developing before birth or egg hatching." [https://orcid.org/0000-0003-3308-6245]
+def: "Staged defined by the formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system." [GO:0001841]
subset: life_stage
-synonym: "embryo late (growth) stage" EXACT [MIAA:0000399]
-synonym: "embryo late growth stage" RELATED [BTO:0000449]
-synonym: "embryo late stage" RELATED [BTO:0000449]
-synonym: "fetal stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
-synonym: "fetus" NARROW [MIAA:0000399]
-synonym: "fetus stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
-xref: EV:0300011
-xref: EVM:2990031
-xref: FBdv:00005333
-xref: FMA:63631
-xref: MIAA:0000399
-xref: MmusDv:0000031
-xref: OGES:000023
-xref: SCTID:367619004
+xref: BilaDO:0000009
+xref: BILS:0000110
+xref: HsapDv:0000012 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000017 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000093 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000027 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000091 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: XAO:1000006
is_a: UBERON:0000105 ! life cycle stage
+relationship: dubious_for_taxon NCBITaxon:7955
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
relationship: part_of UBERON:0000068 ! embryo stage
-relationship: preceded_by UBERON:0000111 ! organogenesis stage
-relationship: preceded_by UBERON:0004707 ! pharyngula stage
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/355" xsd:anyURI
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/565" xsd:anyURI
+relationship: preceded_by UBERON:0000109 ! gastrula stage
+relationship: simultaneous_with GO:0001841 ! neural tube formation
+property_value: seeAlso "https://github.com/obophenotype/developmental-stage-ontologies/issues/84" xsd:anyURI
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/343" xsd:anyURI
+property_value: taxon_notes "In zebrafish, the times of neurulation and segmentation overlap so extensively there is no distinct neurula period of development, such as occurs largely before segmentation in amphibian embryos." xsd:string
[Term]
-id: UBERON:0007221
-name: neonate stage
+id: UBERON:0000111
+name: organogenesis stage
namespace: uberon
-def: "Of or pertaining to the period of time immediately following birth, or to the newborn." [http://en.wiktionary.org/wiki/neonatal, Wikipedia:Infant]
+def: "A stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism." [Wikipedia:Organogenesis]
subset: life_stage
-synonym: "fledgling stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
-synonym: "hatchling" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
-synonym: "hatchling stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
-synonym: "infant stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
-synonym: "neonatal stage" EXACT [OBOL:automatic]
-synonym: "nestling stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
-synonym: "newborn stage" RELATED [https://orcid.org/0000-0002-6601-2165]
-synonym: "pouch stage" NARROW SENSU [NCBITaxon:9263]
-synonym: "puggle" NARROW SENSU [NCBITaxon:189497]
-synonym: "puggle stage" NARROW SENSU [NCBITaxon:189497]
-xref: BTO:0001762
-xref: EV:0300037
-xref: HsapDv:0000082
-xref: http://neurolex.org/wiki/Category\:Infant_organism
-xref: http://neurolex.org/wiki/Category\:Newborn_organism
-xref: MmusDv:0000096
-xref: NIF_Organism:birnlex_695
-xref: OGES:000025
-xref: Wikipedia:Infant
+synonym: "segmentation stage" RELATED []
+xref: BilaDO:0000010
+xref: BILS:0000111
+xref: HsapDv:0000015 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000018 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000094 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000028 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000055 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000022 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000086 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000005
+xref: OGES:000032
+xref: Wikipedia:Organogenesis
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000112 ! sexually immature stage
-property_value: editor_note "consider splitting infant/newborn" xsd:string
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/350" xsd:anyURI
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0000068 ! embryo stage
+relationship: simultaneous_with GO:0048513 ! animal organ development
+property_value: seeAlso "https://github.com/obophenotype/developmental-stage-ontologies/issues/84" xsd:anyURI
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/533" xsd:anyURI
[Term]
-id: UBERON:0007222
-name: late adult stage
+id: UBERON:0000112
+name: sexually immature stage
namespace: uberon
+subset: efo_slim
subset: life_stage
-synonym: "elderly" RELATED [EV:0300123]
-synonym: "elderly stage" RELATED [EV:0300123]
-synonym: "geriatric" RELATED [EV:0300123]
-synonym: "geriatric stage" RELATED [EV:0300123]
-xref: EV:0300123
-xref: HsapDv:0000093
-xref: NCIT:C16268
-xref: NIF_Organism:birnlex_691
-xref: UMLS:C0001792 {source="ncithesaurus:Elderly"}
+synonym: "immature stage" EXACT [VHOG:FB]
+synonym: "juvenile stage" NARROW [XAO:1000010]
+synonym: "subadult stage" RELATED [http://eol.org/schema/terms/subadult]
+xref: BILS:0000112
+xref: BTO:0002168
+xref: EFO:0001300
+xref: EV:0300051
+xref: HsapDv:0000264 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000043 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:AcarDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:BtauDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CfamDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CporDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:EcabDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:FcatDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OanaDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OcunDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000012 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000041 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000009
+xref: XAO:1000010
+xref: XtroDO:0000083
+xref: ZFS:0000051
is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000113 ! post-juvenile adult stage
-relationship: preceded_by UBERON:0018241 ! prime adult stage
-property_value: seeAlso "https://github.com/obophenotype/uberon/issues/495" xsd:anyURI
+relationship: part_of UBERON:0000066 ! fully formed stage
+property_value: external_definition "The stage of being a sexually immature adult animal[XAO:1000010]." xsd:string {source="XAO:1000010"}
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/427" xsd:anyURI
+property_value: taxon_notes "In mammals this would include infant (nourishment from lactation) and juvenile (prepubertal no longer dependent on mother)" xsd:string
[Term]
-id: UBERON:0007232
-name: 2 cell stage
+id: UBERON:0000113
+name: post-juvenile adult stage
namespace: uberon
+def: "The stage of being a sexually mature adult animal." [https://orcid.org/0000-0002-6601-2165]
subset: life_stage
-synonym: "2-cell stage" EXACT [XAO:1000011]
-synonym: "Cleavage:2-cell" NARROW [ZFS:0000002]
-synonym: "NF stage 2 (2-cell)" NARROW SENSU [XAO:1000011]
-synonym: "two-cell stage" EXACT [OBOL:automatic]
-xref: XAO:1000011
-xref: XtroDO:0000006
-xref: ZFS:0000002
+synonym: "adult stage" BROAD []
+xref: BILS:0000113
+xref: EV:0300064
+xref: EV:0300070
+xref: HsapDv:0000258 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MIAA:0000403
+xref: MmusDv:0000110 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:AcarDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:BtauDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CfamDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CporDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:EcabDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:FcatDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000021 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OanaDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OcunDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000016 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000011 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000015 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SsalDv_0000042 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000026
+xref: OGES:000027
+xref: XAO:1000093
+xref: ZFS:0000044
is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by UBERON:0000106 ! zygote stage
-relationship: part_of UBERON:0000107 ! cleavage stage
+relationship: part_of UBERON:0000066 ! fully formed stage
+relationship: preceded_by UBERON:0000112 ! sexually immature stage
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/345" xsd:anyURI
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/499" xsd:anyURI
[Term]
-id: UBERON:0007233
-name: 4 cell stage
+id: UBERON:0000165
+name: mouth
namespace: uberon
-subset: life_stage
-synonym: "4-cell stage" EXACT [XAO:1000013]
-synonym: "Cleavage:4-cell" NARROW [ZFS:0000003]
-synonym: "four-cell stage" EXACT [OBOL:automatic]
-synonym: "NF stage 3 (4-cell)" NARROW SENSU [XAO:1000013]
-xref: XAO:1000013
-xref: XtroDO:0000007
-xref: ZFS:0000003
-is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by UBERON:0007232 ! 2 cell stage
-relationship: part_of UBERON:0000107 ! cleavage stage
+def: "The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks)." [https://github.com/obophenotype/uberon/wiki/The-digestive-tract, Wikipedia:Mouth]
+subset: efo_slim
+subset: human_reference_atlas
+subset: major_organ
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "adult mouth" NARROW []
+synonym: "cavital oralis" RELATED OMO:0003011 [Wikipedia:Mouth]
+synonym: "cavitas oris" RELATED [BTO:0001090]
+synonym: "cavum oris" RELATED [BTO:0001090]
+synonym: "mouth cavity" RELATED [BTO:0001090]
+synonym: "oral region" RELATED [EHDAA2:0001326]
+synonym: "oral vestibule" RELATED [BTO:0001090]
+synonym: "regio oralis" EXACT OMO:0003011 [BTO:0004698, FMA:49184, FMA:TA]
+synonym: "rima oris" RELATED [BTO:0001090]
+synonym: "stoma" RELATED []
+synonym: "stomatodaeum" RELATED [VHOG:0000812]
+synonym: "trophic apparatus" RELATED [http://orcid.org/0000-0002-6601-2165]
+synonym: "vestibule of mouth" RELATED [BTO:0001090]
+synonym: "vestibulum oris" RELATED [BTO:0001090]
+xref: AAO:0010355
+xref: BTO:0001090
+xref: BTO:0004698
+xref: CALOHA:TS-1315
+xref: EFO:0000825
+xref: EHDAA2:0001326
+xref: EHDAA:542
+xref: EMAPA:16262
+xref: FBbt:00003126 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:49184
+xref: GAID:75
+xref: galen:Mouth
+xref: http://purl.obolibrary.org/obo/uberon/images/lamprey_sucker_rosava_3238889218.jpg
+xref: MA:0000341
+xref: MA:0002474
+xref: MAT:0000038
+xref: MESH:D009055
+xref: MIAA:0000038
+xref: SCTID:21082005
+xref: TADS:0000040
+xref: TAO:0000547
+xref: TAO:0000590
+xref: TGMA:0000131
+xref: VHOG:0000280
+xref: VHOG:0000812
+xref: Wikipedia:Mouth
+xref: XAO:0003029
+xref: ZFA:0000547
+xref: ZFA:0000590
+is_a: UBERON:0004921 {notes="the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts"} ! subdivision of digestive tract
+intersection_of: UBERON:0004921 ! subdivision of digestive tract
+intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract
+relationship: develops_from UBERON:0035804 ! future mouth
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: present_in_taxon NCBITaxon:9606
+relationship: proximalmost_part_of UBERON:0001555 ! digestive tract
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/0/06/Mouth_illustration-Otis_Archives.jpg" xsd:anyURI
+property_value: development_notes "some AOs place this as developing from the stomodeum but we weaken this to developmental contribution, as the mouth includes non-ectodermal derivatives" xsd:string
+property_value: external_definition "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010355", ontology="AAO", source="AAO:BJB"}
+property_value: external_ontology_notes "in FMA, the tongue, palate etc are part of the mouth which is itself a subdivision of the face. ZFA includes a separate class 'oral region' which is part of the mouth, but excludes tongue and lips" xsd:string {external_ontology="FMA"}
+property_value: has_relational_adjective "oral" xsd:string
+property_value: homology_notes "Molecular and developmental cell lineage data suggest that the acoel mouth opening is homologous to the mouth of protostomes and deuterostomes and that the last common ancestor of the Bilateria (the 'urbilaterian') had only this single digestive opening.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000812", ontology="VHOG", source="DOI:10.1038/nature07309 Hejnol A, Martindale MQ, Acoel development indicates the independent evolution of the bilaterian mouth and anus. Nature (2008)", source="http://bgee.unil.ch/"}
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/661" xsd:anyURI
+
+[Term]
+id: UBERON:0000307
+name: blastula
+namespace: uberon
+alt_id: UBERON:0007011
+def: "Organism at the blastula stage - an early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence." [Wikipedia:Blastula]
+subset: inconsistent_with_fma
+synonym: "blastosphere" RELATED [Wikipedia:Blastula]
+synonym: "blastula embryo" EXACT [BILA:0000059]
+xref: BILA:0000059
+xref: BTO:0000128
+xref: GAID:1294
+xref: MESH:D036703
+xref: OGEM:000006
+xref: Wikipedia:Blastula
+is_a: UBERON:0000922 ! embryo
+intersection_of: UBERON:0000468 ! multicellular organism
+intersection_of: existence_starts_and_ends_during UBERON:0000108 ! blastula stage
+relationship: develops_from UBERON:0007010 ! cleaving embryo
+relationship: existence_starts_and_ends_during UBERON:0000108 ! blastula stage
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png" xsd:anyURI
+property_value: editor_note "TODO - check relationship with epiblast. Note in FMA this is not a subclass of embryo, but in uberon embryo is the whole organism from zygote onwards and thus includes the blastula" xsd:string
+
+[Term]
+id: UBERON:0000383
+name: musculature of body
+namespace: uberon
+def: "The subdivision of the musculoskeletal system that consists of all the muscles of the body[VSAO, modified]." [VSAO:0000033]
+subset: efo_slim
+subset: human_reference_atlas
+subset: pheno_slim
+synonym: "muscle system" EXACT []
+synonym: "muscle system of body" EXACT []
+synonym: "muscular system" EXACT [FMA:72954]
+synonym: "musculature system" EXACT [BILA:0000088]
+synonym: "muskelsystem" RELATED [BTO:0001485]
+synonym: "set of all muscles" EXACT [FMA:72954]
+synonym: "set of muscles of body" EXACT [FMA:72954]
+synonym: "vertebrate muscular system" EXACT [BTO:0001369]
+xref: AAO:0000307
+xref: BILA:0000088
+xref: BTO:0001369
+xref: BTO:0001485
+xref: EFO:0000801
+xref: FMA:72954
+xref: MA:0002888
+xref: MAT:0000025
+xref: MIAA:0000025
+xref: VSAO:0000033
+xref: XAO:0004042
+is_a: UBERON:0011216 ! organ system subdivision
+intersection_of: UBERON:0011216 ! organ system subdivision
+intersection_of: composed_primarily_of UBERON:0001015 ! musculature
+relationship: capable_of GO:0003012 ! muscle system process
+relationship: composed_primarily_of UBERON:0001015 ! musculature
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: never_in_taxon NCBITaxon:6040
+relationship: present_in_taxon NCBITaxon:9606
+property_value: editor_note "consider whether this should be restricted to skeletal musculature. See https://github.com/obophenotype/uberon/issues/77" xsd:string
+property_value: external_definition "Anatomical system that consists of the muscles of the body.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000033", ontology="VSAO", source="VSAO:curator"}
+property_value: external_ontology_notes "we place the MA term musculature here, rather than under uberon:musculature, as this seems more appropriate given the structure of MA" xsd:string {external_ontology="MA"}
+
+[Term]
+id: UBERON:0000463
+name: organism substance
+namespace: uberon
+def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [http://orcid.org/0000-0001-9114-8737]
+subset: common_anatomy
+subset: pheno_slim
+subset: upper_level
+synonym: "body fluid or substance" EXACT [MA:0002450]
+synonym: "body substance" EXACT [FMA:9669]
+synonym: "organism substance" EXACT [CARO:0000004]
+synonym: "portion of body substance" EXACT [FMA:9669]
+synonym: "portion of organism substance" EXACT [ZFA:0001487]
+xref: AAO:0010839
+xref: AEO:0000004
+xref: BILA:0000004
+xref: CALOHA:TS-2101
+xref: CARO:0000004
+xref: EHDAA2:0003004
+xref: EMAPA:35178
+xref: FBbt:00007019 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:9669
+xref: galen:BodySubstance
+xref: HAO:0000004
+xref: MA:0002450
+xref: NCIT:C13236
+xref: SPD:0000008
+xref: TAO:0001487
+xref: TGMA:0001824
+xref: VHOG:0001726
+xref: XAO:0004001
+xref: ZFA:0001487
+is_a: UBERON:0000465 ! material anatomical entity
+relationship: has_quality PATO:0002198 ! quality of a substance
+relationship: part_of UBERON:0000468 {notes="this relationship may be too strong and may be weakened in future"} ! multicellular organism
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: IAO:0000589 "organism substance (AEO)" xsd:string
[Term]
-id: UBERON:0007236
-name: 8 cell stage
+id: UBERON:0000464
+name: anatomical space
namespace: uberon
-subset: life_stage
-synonym: "8-cell stage" EXACT [XAO:1000014]
-synonym: "Cleavage:8-cell" NARROW [ZFS:0000004]
-synonym: "eight-cell stage" EXACT [OBOL:automatic]
-synonym: "NF stage 4 (8-cell)" NARROW SENSU [XAO:1000014]
-xref: XAO:1000014
-xref: XtroDO:0000008
-xref: ZFS:0000004
-is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by UBERON:0007233 ! 4 cell stage
-relationship: part_of UBERON:0000107 ! cleavage stage
+def: "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [http://orcid.org/0000-0001-9114-8737]
+subset: common_anatomy
+subset: upper_level
+synonym: "anatomical spaces" RELATED OMO:0003004 [ZFA:0001643]
+synonym: "lumen" BROAD []
+synonym: "lumen space" EXACT []
+synonym: "space" BROAD []
+xref: AAO:0010110
+xref: AEO:0000005
+xref: BILA:0000005
+xref: CARO:0000005
+xref: EHDAA2:0003005
+xref: FBbt:00007017 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:5897
+xref: HAO:0000005
+xref: NCIT:C94478
+xref: TAO:0001668
+xref: TGMA:0001825
+xref: UMLS:C0524461 {source="ncithesaurus:Lumen_Space"}
+xref: VHOG:0001728
+xref: XAO:0003190
+xref: ZFA:0001643
+is_a: UBERON:0000466 ! immaterial anatomical entity
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+relationship: surrounded_by UBERON:0000061 ! anatomical structure
+property_value: IAO:0000589 "anatomical space (AEO)" xsd:string
[Term]
-id: UBERON:0007284
-name: presumptive neural plate
+id: UBERON:0000465
+name: material anatomical entity
namespace: uberon
-def: "A presumptive structure that has the potential to develop into a neural plate." [OBOL:automatic]
-subset: efo_slim
-synonym: "prospective neuroectoderm" EXACT [ZFA:0000063]
-synonym: "prospective vegetal ectoderm" EXACT [ZFA:0000063]
-xref: EFO:0003424
-xref: TAO:0000063
-xref: ZFA:0000063
-is_a: UBERON:0016879 ! future central nervous system
-intersection_of: UBERON:0006598 ! presumptive structure
-intersection_of: has_potential_to_develop_into UBERON:0003075 ! neural plate
-relationship: develops_from UBERON:0002346 ! neurectoderm
-relationship: has_potential_to_develop_into UBERON:0003075 ! neural plate
-relationship: part_of UBERON:0004734 ! gastrula
-property_value: editor_note "consider merging" xsd:string
-property_value: external_definition "Region of the gastrula which gives rise to the neural plate.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000063", ontology="TAO", source="ZFIN:curator"}
+def: "Anatomical entity that has mass." [http://orcid.org/0000-0001-9114-8737]
+subset: common_anatomy
+subset: upper_level
+xref: AAO:0010264
+xref: AEO:0000006
+xref: BILA:0000006
+xref: CARO:0000006
+xref: EHDAA2:0003006
+xref: FBbt:00007016 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:67165
+xref: HAO:0000006
+xref: TAO:0001836
+xref: TGMA:0001826
+xref: VHOG:0001721
+is_a: BFO:0000040 ! material entity
+is_a: UBERON:0001062 ! anatomical entity
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: IAO:0000589 "material anatomical entity (AEO)" xsd:string
[Term]
-id: UBERON:0008264
-name: echinopluteus larval stage
+id: UBERON:0000466
+name: immaterial anatomical entity
namespace: uberon
-def: "Larval stage in echinoderms characterized by a planktonic and feeding larval form that possesses limb-like outgrowths bearing ciliated bands." [http://www.encyclopedia.com/doc/1O8-echinopluteuslarva.html]
-subset: life_stage
-synonym: "pluteus larval stage" EXACT []
-is_a: UBERON:0000069 ! larval stage
-relationship: in_taxon NCBITaxon:7586 ! Echinodermata
+def: "Anatomical entity that has no mass." [http://orcid.org/0000-0001-9114-8737]
+subset: common_anatomy
+subset: upper_level
+synonym: "immaterial physical anatomical entity" EXACT [FMA:67112]
+xref: AAO:0010265
+xref: AEO:0000007
+xref: BILA:0000007
+xref: CARO:0000007
+xref: EHDAA2:0003007
+xref: FBbt:00007015 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:67112
+xref: HAO:0000007
+xref: TAO:0001835
+xref: TGMA:0001827
+xref: VHOG:0001727
+is_a: BFO:0000141 ! immaterial entity
+is_a: UBERON:0001062 ! anatomical entity
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: IAO:0000589 "immaterial anatomical entity (AEO)" xsd:string
[Term]
-id: UBERON:0009849
-name: tadpole stage
+id: UBERON:0000467
+name: anatomical system
namespace: uberon
-def: "Wholly aquatic larval stage in the life cycle of an amphibian, particularly of a frog or toad[WP]. XAO: The stages from feeding to the end of metamorphosis. Encompasses Weisz's first-form tadpole (equivalent to NF stages 45 to 49), second-form tadpole (NF 49 to 56) and third-form tadpole (NF 56 to 60-plus) stages." [ISBN:0471209627, ISSN:0003-276X, Wikipedia:Tadpole]
-subset: life_stage
-xref: Wikipedia:Tadpole
-xref: XAO:1000008
-is_a: UBERON:0004728 ! amphibian larval stage
+def: "Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function." [CARO:0000011]
+subset: common_anatomy
+subset: human_reference_atlas
+subset: pheno_slim
+subset: uberon_slim
+subset: upper_level
+synonym: "anatomical systems" RELATED OMO:0003004 [ZFA:0001439]
+synonym: "body system" EXACT [BIRNLEX:14]
+synonym: "connected anatomical system" EXACT [CARO:0000011]
+synonym: "organ system" EXACT []
+synonym: "system" BROAD [GO:0048731]
+xref: AAO:0000007
+xref: AEO:0000011
+xref: BILA:0000011
+xref: BIRNLEX:14
+xref: BSA:0000049
+xref: CALOHA:TS-2088
+xref: CARO:0000011
+xref: EHDAA2:0003011
+xref: EHDAA:392
+xref: EMAPA:16103
+xref: EV:0100000
+xref: FBbt:00004856 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:7149
+xref: galen:AnatomicalSystem
+xref: HAO:0000011
+xref: IDOMAL:0002460 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0003-4423-4370", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
+xref: MA:0000003
+xref: NCIT:C12919
+xref: SCTID:278195005
+xref: TAO:0001439
+xref: TGMA:0001831
+xref: UMLS:C0460002 {source="ncithesaurus:Organ_System"}
+xref: VHOG:0001725
+xref: WBbt:0005746
+xref: WBbt:0005763
+xref: Wikipedia:Organ_system
+xref: XAO:0003002
+xref: ZFA:0001439
+is_a: UBERON:0000061 ! anatomical structure
+relationship: has_part UBERON:0000062 ! organ
+relationship: part_of UBERON:0000468 ! multicellular organism
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+relationship: present_in_taxon NCBITaxon:9606
+relationship: seeAlso EHDAA2:0001330
+property_value: IAO:0000589 "anatomical system (AEO)" xsd:string
[Term]
-id: UBERON:0009850
-name: nematode larva
+id: UBERON:0000468
+name: multicellular organism
namespace: uberon
-def: "A multicellular organism that existence_starts_and_ends_during a nematode larval stage." [OBOL:automatic]
-is_a: UBERON:0002548 ! larva
-intersection_of: UBERON:0000468 ! multicellular organism
-intersection_of: existence_starts_and_ends_during UBERON:0004729 ! nematode larval stage
-relationship: existence_starts_and_ends_during UBERON:0004729 ! nematode larval stage
-relationship: present_in_taxon NCBITaxon:6239
+def: "Anatomical structure that is an individual member of a species and consists of more than one cell." [CARO:0000012, http://orcid.org/0000-0001-9114-8737, Wikipedia:Multi-cellular_organism]
+subset: common_anatomy
+subset: efo_slim
+subset: pheno_slim
+subset: uberon_slim
+subset: upper_level
+synonym: "body" RELATED [AEO:0000103, BIRNLEX:18, FMA:256135, NCIT:C13041]
+synonym: "Koerper" RELATED [BTO:0001489]
+synonym: "multi-cellular organism" EXACT [CARO:0000012]
+synonym: "organism" BROAD [FBbt:00000001, VHOG:0000671, WBbt:0007833]
+synonym: "whole body" RELATED [BTO:0001489]
+synonym: "whole organism" RELATED [FBbt:00000001]
+xref: AAO:0010026
+xref: AEO:0000191
+xref: BILA:0000012
+xref: BIRNLEX:18
+xref: BSA:0000038
+xref: BTO:0000042
+xref: CARO:0000012
+xref: EFO:0002906
+xref: EHDAA2:0003103
+xref: EHDAA2:0003191
+xref: EHDAA:1
+xref: EMAPA:25765
+xref: EV:0100016
+xref: FBbt:00000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:256135
+xref: galen:Organism
+xref: HAO:0000012
+xref: NCIT:C13041
+xref: ncithesaurus:Whole_Organism
+xref: SCTID:243928005
+xref: TADS:0000001
+xref: TAO:0001094
+xref: TGMA:0001832
+xref: VHOG:0000671
+xref: WBbt:0007833
+xref: Wikipedia:Multi-cellular_organism
+xref: XAO:0003004
+xref: ZFA:0001094
+is_a: UBERON:0010000 ! multicellular anatomical structure
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: editor_note "TODO - split body and mc organism? body continues after death stage" xsd:string
+property_value: has_relational_adjective "organismal" xsd:string
+property_value: IAO:0000589 "multicellular organism (AEO)" xsd:string
[Term]
-id: UBERON:0010000
-name: multicellular anatomical structure
+id: UBERON:0000476
+name: acellular anatomical structure
namespace: uberon
-def: "An anatomical structure that has more than one cell as a part." [CARO:0010000]
+def: "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue." [http://orcid.org/0000-0001-9114-8737]
subset: common_anatomy
-subset: upper_level
-synonym: "multicellular structure" EXACT [FBbt:00100313]
-xref: CARO:0010000
-xref: FBbt:00100313 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+subset: vertebrate_core
+synonym: "acellular anatomical structures" RELATED OMO:0003004 [ZFA:0000382]
+xref: AAO:0010268
+xref: AEO:0000040
+xref: BILA:0000040
+xref: CARO:0000040
+xref: EHDAA2:0003040
+xref: FBbt:00007013 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:63863
+xref: HAO:0000040
+xref: TAO:0000382
+xref: TGMA:0001841
+xref: XAO:0003162
+xref: ZFA:0000382
is_a: UBERON:0000061 ! anatomical structure
-intersection_of: UBERON:0000061 ! anatomical structure
-intersection_of: has_quality PATO:0001993 ! multicellular
-relationship: has_part CL:0000000 ! cell
-relationship: has_quality PATO:0001993 ! multicellular
relationship: present_in_taxon NCBITaxon:33090
relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
relationship: present_in_taxon NCBITaxon:4751
+property_value: IAO:0000589 "acellular anatomical structure (AEO)" xsd:string
[Term]
-id: UBERON:0010199
-name: bona-fide anatomical boundary
-namespace: uberon
-def: "An anatomical boundary that corresponds to some physical discontinuity." [CARO:0001004]
-comment: One might argue that all boundaries are actually fiat in the sense that there must be some fiat element at a fine enough scale of granularity. This ontology choses to ignore this issue as below the level of granularity relevant to anatomy. (DOS121102)
-subset: upper_level
-xref: CARO:0001004
-is_a: UBERON:0000466 {source="CARO"} ! immaterial anatomical entity
-
-[Term]
-id: UBERON:0010316
-name: germ layer / neural crest
-namespace: uberon
-is_a: UBERON:0002050 ! embryonic structure
-is_a: UBERON:0005291 ! embryonic tissue
-relationship: develops_from UBERON:0002532 ! epiblast (generic)
-
-[Term]
-id: UBERON:0010371
-name: ecto-epithelium
-namespace: uberon
-def: "Epithelium composed of cells that develops from the ectoderm[FMA,modified]." [FMA:69064]
-synonym: "ectoderm-derived epithelium" EXACT []
-xref: FMA:69064
-is_a: UBERON:0000483 ! epithelium
-is_a: UBERON:0004121 ! ectoderm-derived structure
-intersection_of: UBERON:0000483 ! epithelium
-intersection_of: develops_from UBERON:0000924 ! ectoderm
-relationship: composed_primarily_of CL:0002077 ! ecto-epithelial cell
-
-[Term]
-id: UBERON:0011137
-name: axial skeletal system
-namespace: uberon
-def: "Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [https://orcid.org/0000-0002-6601-2165]
-xref: FMA:7483
-is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system
-relationship: has_part UBERON:0000982 ! skeletal joint
-property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI
-
-[Term]
-id: UBERON:0011216
-name: organ system subdivision
+id: UBERON:0000479
+name: tissue
namespace: uberon
-def: "A subdivision of an anatomical system." [http://orcid.org/0000-0002-6601-2165]
+def: "Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation." [CARO:0000043]
subset: common_anatomy
-subset: human_reference_atlas
+subset: pheno_slim
subset: upper_level
-xref: FBbt:00007330 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
-xref: FMA:67509
-xref: SCTID:91690000
-is_a: UBERON:0010000 {source="FBbt"} ! multicellular anatomical structure
-relationship: part_of UBERON:0000467 ! anatomical system
+synonym: "portion of tissue" EXACT [CARO:0000043]
+synonym: "simple tissue" NARROW [AEO:0000043]
+synonym: "tissue portion" EXACT []
+xref: AAO:0000607
+xref: AAO:0010054
+xref: AEO:0000043
+xref: BILA:0000043
+xref: BIRNLEX:19
+xref: CALOHA:TS-2090
+xref: CARO:0000043
+xref: EHDAA2:0003043
+xref: EMAPA:35868
+xref: FBbt:00007003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:9637
+xref: galen:Tissue
+xref: HAO:0000043
+xref: MA:0003002
+xref: MESH:D014024
+xref: NCIT:C12801
+xref: TAO:0001477
+xref: TGMA:0001844
+xref: UMLS:C0040300 {source="ncithesaurus:Tissue"}
+xref: VHOG:0001757
+xref: WBbt:0005729
+xref: XAO:0003040
+xref: ZFA:0001477
+is_a: UBERON:0010000 {source="CARO"} ! multicellular anatomical structure
+relationship: has_part GO:0031012 ! extracellular matrix
+relationship: part_of UBERON:0000468 ! multicellular organism
relationship: present_in_taxon NCBITaxon:33090
relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
relationship: present_in_taxon NCBITaxon:4751
-relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens
-
-[Term]
-id: UBERON:0012101
-name: perinatal stage
-namespace: uberon
-def: "The period spanning the range immediately before and after birth." [http://orcid.org/0000-0002-6601-2165]
-subset: life_stage
-synonym: "paranatal stage" NARROW []
-is_a: UBERON:0000105 ! life cycle stage
-relationship: overlaps UBERON:0000068 ! embryo stage
-relationship: overlaps UBERON:0000092 ! post-embryonic stage
-property_value: taxon_notes "In birds, the paranatal stage starts when the beak penetrates into the air pocket (air cell) between the inner and outer shell membranes" xsd:string
-
-[Term]
-id: UBERON:0013522
-name: subdivision of tube
-namespace: uberon
-is_a: UBERON:0000064 ! organ part
-relationship: has_part UBERON:0000060 ! anatomical wall
-relationship: has_part UBERON:0000464 ! anatomical space
-relationship: part_of UBERON:0000025 ! tube
-relationship: subdivision_of UBERON:0000025 ! tube
+property_value: editor_note "changed label and definition to reflect CARO2" xsd:string
+property_value: IAO:0000589 "tissue (AEO)" xsd:string
[Term]
-id: UBERON:0013686
-name: anatomical conduit space
+id: UBERON:0000481
+name: multi-tissue structure
namespace: uberon
-def: "An anatomical space which is the lumen of some anatomical conduit and connects two or more spaces together[FMA,modified]." [FMA:9338, http://orcid.org/0000-0002-6601-2165]
+def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [CARO:0000055, http://orcid.org/0000-0001-9114-8737]
subset: common_anatomy
-synonym: "foramen space" NARROW []
-xref: FMA:9338
-is_a: UBERON:0000464 {source="FMA"} ! anatomical space
-relationship: connects UBERON:0000464 {cardinality="2"} ! anatomical space
-relationship: luminal_space_of UBERON:0004111 ! anatomical conduit
-relationship: part_of UBERON:0004111 ! anatomical conduit
+subset: upper_level
+synonym: "multi-tissue structures" RELATED OMO:0003004 [ZFA:0001488]
+xref: AAO:0010048
+xref: AEO:0000055
+xref: BILA:0000055
+xref: CARO:0000055
+xref: EHDAA2:0003055
+xref: FBbt:00007010 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: HAO:0000055
+xref: TAO:0001488
+xref: TGMA:0001847
+xref: VHOG:0001762
+xref: XAO:0003037
+xref: ZFA:0001488
+is_a: UBERON:0010000 {source="CARO"} ! multicellular anatomical structure
+relationship: has_part UBERON:0000479 ! tissue
relationship: present_in_taxon NCBITaxon:33090
relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
relationship: present_in_taxon NCBITaxon:4751
+property_value: IAO:0000589 "multi-tissue structure (AEO)" xsd:string
[Term]
-id: UBERON:0014405
-name: nymph stage
-namespace: uberon
-def: "A larval stage of that is the immature stage of some invertebrates that undergoe gradual metamorphosis (hemimetabolism) before reaching its adult stage." [UBERON:cjm]
-subset: life_stage
-synonym: "nymph" RELATED [BTO:0000954]
-xref: BTO:0000954
-xref: Wikipedia:Nymph_(biology)
-is_a: UBERON:0000069 ! larval stage
-relationship: in_taxon NCBITaxon:33213 ! Bilateria
-relationship: never_in_taxon NCBITaxon:7742 ! Vertebrata
-property_value: external_definition "Any of various immature insects; especially: a larva of an insect (as a grasshopper, true bug, or mayfly) with incomplete metamorphosis that differs from the imago especially in size and in its incompletely developed wings and genitalia[BTO:0000954]." xsd:string {source="BTO:0000954"}
-
-[Term]
-id: UBERON:0014406
-name: nauplius stage
-namespace: uberon
-def: "The free-swimming first stage of the larva of certain crustaceans, having an unsegmented body with three pairs of appendages and a single median eye. The eye is known for that reason as the 'naupliar eye', and is often absent in later developmental stages, although it is retained into the adult form in some groups, such as the Notostraca." [Wikipedia:Crustacean_larvae#Nauplius]
-subset: life_stage
-synonym: "nauplius" RELATED [BTO:0000915]
-xref: BTO:0000915
-is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0018378 ! crustacean larval stage
-property_value: external_definition "A crustacean larva in usually the first stage after leaving the egg and with three pairs of appendages, a median eye, and little or no segmentation[BTO:0000915]." xsd:string {source="BTO:0000915"}
-
-[Term]
-id: UBERON:0014856
-name: cysticercus stage
-namespace: uberon
-def: "The larval form of any of the Taenia tapeworms." [BTO:0003168, http://www.medterms.com/]
-subset: life_stage
-synonym: "cysticercus" EXACT [BTO:0003168]
-xref: BTO:0003168
-is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:6157 ! Platyhelminthes
-relationship: part_of UBERON:0000069 ! larval stage
-
-[Term]
-id: UBERON:0014857
-name: zoea stage
-namespace: uberon
-def: "A crustacean larval stage characterised by the use of the thoracic appendages for swimming." [Wikipedia:Crustacean_larvae#Zoea]
-subset: life_stage
-synonym: "zoea" RELATED []
-is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:6657 ! Crustacea
-relationship: part_of UBERON:0018378 ! crustacean larval stage
-relationship: preceded_by UBERON:0014406 ! nauplius stage
-
-[Term]
-id: UBERON:0014858
-name: crustacean post-larval stage
-namespace: uberon
-def: "A crustacean larval stage characterised by the use of abdominal appendages (pleopods) for propulsion." [Wikipedia:Crustacean_larvae#Post-larval]
-subset: life_stage
-synonym: "glaucothoe stage (hermit crab)" NARROW []
-synonym: "parva stage (shrimp)" NARROW []
-synonym: "post-larva" RELATED []
-synonym: "post-larval" RELATED []
-synonym: "post-larval stage" RELATED []
-synonym: "postlarva" RELATED []
-xref: BTO:0002655
-is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0018378 ! crustacean larval stage
-
-[Term]
-id: UBERON:0014859
-name: megalopa stage
+id: UBERON:0000483
+name: epithelium
namespace: uberon
-def: "The crustacean post-larval stage of a crab." [http://orcid.org/0000-0002-6601-2165]
-subset: life_stage
-synonym: "megalopa" RELATED []
-is_a: UBERON:0014858 ! crustacean post-larval stage
-property_value: editor_note "Consider merging into parent" xsd:string
+def: "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO]." [http://orcid.org/0000-0001-9114-8737, Wikipedia:Epithelium]
+comment: Editor note: surface epithelium may contain non-epithelial cells, such as melanocytes, lymphocytes and dendritic cells, within the sheet of epithelial cells. Do we consider these part of the epithelium, or located-in it?
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "epithelial tissue" EXACT []
+synonym: "portion of epithelium" EXACT [FMA:9639]
+xref: AAO:0000144
+xref: AAO:0010055
+xref: AEO:0000066
+xref: BILA:0000066
+xref: BTO:0000416
+xref: CALOHA:TS-0288
+xref: CARO:0000066
+xref: EHDAA2:0003066
+xref: EMAPA:32738
+xref: FBbt:00007005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:9639
+xref: GAID:402
+xref: HAO:0000066
+xref: MA:0003060
+xref: MESH:D004848
+xref: NCIT:C12710
+xref: SCTID:31610004
+xref: TAO:0001486
+xref: UMLS:C0014609 {source="ncithesaurus:Epithelium"}
+xref: VHOG:0000387
+xref: Wikipedia:Epithelium
+xref: XAO:0003045
+xref: ZFA:0001486
+is_a: UBERON:0000479 ! tissue
+intersection_of: UBERON:0000479 ! tissue
+intersection_of: composed_primarily_of CL:0000066 ! epithelial cell
+relationship: composed_primarily_of CL:0000066 ! epithelial cell
+relationship: has_part GO:0005911 ! cell-cell junction
+relationship: has_part UBERON:0005769 ! basement membrane of epithelium
+relationship: in_taxon NCBITaxon:33208 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"} ! Metazoa
+property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg" xsd:anyURI
+property_value: has_relational_adjective "epithelial" xsd:string
+property_value: homology_notes "The two basic types of metazoan tissue are epithelial and connective. The simplest metazoans, and developmental stages of many primitive invertebrates, consist solely of these two layers. Thus, epithelial and connective tissues may be the primary (original) tissues of metazoans, and both are important in the functional organization of animals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000387", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.59", source="http://bgee.unil.ch/"}
+property_value: IAO:0000589 "epithelium (AEO)" xsd:string
[Term]
-id: UBERON:0014860
-name: copepodite stage
+id: UBERON:0000490
+name: unilaminar epithelium
namespace: uberon
-def: "A development stage of copepods which follows the nauplius stage. It is segmented with more than 3 pairs of appendages." [http://www.encyclo.co.uk/define/Copepodite]
-subset: life_stage
-synonym: "copepodite" RELATED []
-is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:6830 ! Copepoda
-relationship: part_of UBERON:0018378 ! crustacean larval stage
-relationship: preceded_by UBERON:0014406 ! nauplius stage
+def: "Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium.[FMA]." [FMA:45561, http://orcid.org/0000-0001-9114-8737]
+subset: vertebrate_core
+synonym: "simple epithelium" EXACT [FMA:45561]
+synonym: "unilaminar epithelia" RELATED OMO:0003004 [ZFA:0001495]
+xref: AAO:0010062
+xref: AEO:0000073
+xref: BILA:0000073
+xref: BTO:0002073
+xref: CARO:0000073
+xref: EHDAA2:0003073
+xref: FMA:45561
+xref: HAO:0000073
+xref: NCIT:C33554
+xref: SCTID:309043004
+xref: TAO:0001495
+xref: UMLS:C0682574 {source="ncithesaurus:Simple_Epithelium"}
+xref: XAO:0004007
+xref: ZFA:0001495
+is_a: UBERON:0000483 ! epithelium
+property_value: editor_note "consider adding disjointness axiom between unilaminar and multilaminar - but note that this will render EHDAA2:0003244 (chorionic trophoblast) unsatisfiable" xsd:string
+property_value: external_definition "Epithelium that consists of a single layer of epithelial cells.[CARO]" xsd:string {date_retrieved="2012-06-20", external_class="CARO:0000073", ontology="CARO", source="FMA:45561", source="http://orcid.org/0000-0001-9114-8737"}
+property_value: IAO:0000589 "unilaminar epithelium (AEO)" xsd:string
[Term]
-id: UBERON:0014861
-name: glaucothoe stage
+id: UBERON:0000922
+name: embryo
+namespace: http://www.xspan.org/obo.owl#
namespace: uberon
-def: "A developmental stage in a hermit crab that has completed the swimming larval stages." [http://www.encyclo.co.uk/define/Copepodite]
-subset: life_stage
-synonym: "glaucothoe" RELATED []
-is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:6657 ! Crustacea
-relationship: part_of UBERON:0018378 ! crustacean larval stage
+alt_id: UBERON:0000922
+alt_id: ZFA:0001105
+def: "Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant." [BTO:0000379, FB:FBrf0039741, FB:FBrf0041814, GO:0009790, Wikipedia:Embryo]
+subset: efo_slim
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "developing organism" RELATED [BILA:0000056]
+synonym: "developmental tissue" RELATED []
+synonym: "embryonic organism" EXACT [BILA:0000056]
+xref: AAO:0011035
+xref: AEO:0000169
+xref: BILA:0000056
+xref: BSA:0000039
+xref: BTO:0000379
+xref: CALOHA:TS-0229
+xref: EFO:0001367
+xref: EHDAA2:0000002
+xref: EHDAA2_RETIRED:0003236
+xref: EHDAA:38
+xref: EMAPA:16039
+xref: FBbt:00000052 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:69068
+xref: GAID:963
+xref: http://neurolex.org/wiki/Category\:Embryonic_organism
+xref: IDOMAL:0000646 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0003-4423-4370", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
+xref: MAT:0000226
+xref: MESH:D004622
+xref: MIAA:0000019
+xref: NCIT:C28147
+xref: OGEM:000001
+xref: SCTID:57991002
+xref: UMLS:C0013935 {source="ncithesaurus:Embryo"}
+xref: VHOG:0001766
+xref: Wikipedia:Embryo
+xref: XAO:0000113
+xref: ZFA:0000103
+is_a: UBERON:0000468 ! multicellular organism
+intersection_of: UBERON:0000468 ! multicellular organism
+intersection_of: existence_ends_with UBERON:0000068 ! embryo stage
+intersection_of: existence_starts_with UBERON:0000068 ! embryo stage
+relationship: existence_ends_with UBERON:0000068 ! embryo stage
+relationship: existence_starts_with UBERON:0000068 ! embryo stage
+relationship: part_of UBERON:0004716 ! conceptus
+property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/2/2d/Wrinkledfrog_embryos.jpg" xsd:anyURI
+property_value: external_ontology_notes "Obsoleted in ZFA. Note that embryo is not classified as an embryonic structure - an embryonic structure is only the parts of an embryo" xsd:string {external_ontology="ZFA"}
+property_value: has_relational_adjective "embryonic" xsd:string
+property_value: IAO:0000589 "embryo (AEO)" xsd:string
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/503" xsd:anyURI
[Term]
-id: UBERON:0014862
-name: trochophore stage
+id: UBERON:0000923
+name: germ layer
namespace: uberon
-def: "A larval stage of a trochozoan in which the organism is in free-swimming planktonic form with several bands of cilia[WP,modified]." [Wikipedia:Trochophore]
-subset: life_stage
-synonym: "trochophore" RELATED []
-synonym: "trocophore" RELATED []
-xref: Wikipedia:Trochophore
-is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:33317 ! Protostomia
-relationship: part_of UBERON:0000069 ! larval stage
+def: "A layer of cells produced during the process of gastrulation during the early development of the animal embryo, which is distinct from other such layers of cells, as an early step of cell differentiation. The three types of germ layers are the endoderm, ectoderm, and mesoderm." [https://github.com/obophenotype/uberon/issues/203, Wikipedia:Germ_layer]
+comment: Classically the germ layers are ectoderm, mesoderm and endoderm. Alternatively: primary = ectoderm, endoderm; secondary=mesoderm; tertiary=dorsal mesoderm, NC[https://github.com/obophenotype/uberon/wiki/The-neural-crest]
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "embryonic germ layer" RELATED []
+synonym: "embryonic germ layers" RELATED []
+synonym: "embryonic tissue" BROAD [FMA:69069]
+synonym: "germinal layer" EXACT [ncithesaurus:Germinal_Layer]
+synonym: "primary germ layer" NARROW [GO:0001704, ZFA:0001122]
+xref: AAO:0000480
+xref: BILA:0000035
+xref: BTO:0000556
+xref: EMAPA:36033
+xref: FBbt:00000110 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:69069
+xref: GAID:1303
+xref: MESH:D005855
+xref: NCIT:C12950
+xref: NCIT:C54105
+xref: TAO:0001122
+xref: UMLS:C0920502 {source="ncithesaurus:Embryonic_Tissue"}
+xref: UMLS:C1708239 {source="ncithesaurus:Germinal_Layer"}
+xref: VHOG:0001223
+xref: Wikipedia:Germ_layer
+xref: XAO:0003011
+xref: ZFA:0001122
+is_a: UBERON:0010316 ! germ layer / neural crest
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+property_value: homology_notes "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001223", ontology="VHOG", source="ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:0014863
-name: veliger stage
+id: UBERON:0000924
+name: ectoderm
namespace: uberon
-def: "The characteristic larval stage of the gastropod, bivalve and scaphopod taxonomic classes. It is produced following either the embryonic or trochophore larval stage of development." [Wikipedia:Veliger]
-subset: life_stage
-synonym: "veliger" RELATED []
-xref: Wikipedia:Veliger
-is_a: UBERON:0000105 ! life cycle stage
-relationship: in_taxon NCBITaxon:6447 ! Mollusca
-relationship: part_of UBERON:0000069 ! larval stage
+def: "Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue." [Wikipedia:Ectoderm]
+subset: efo_slim
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "embryonic ectoderm" EXACT [VHOG:0000153]
+xref: AAO:0000137
+xref: BILA:0000036
+xref: BTO:0000315
+xref: CALOHA:TS-0216
+xref: EFO:0000414
+xref: EHDAA2:0000428
+xref: EMAPA:16069
+xref: EV:0100003
+xref: FBbt:00000111 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:69070
+xref: GAID:1304
+xref: MAT:0000155
+xref: MAT:0000173
+xref: MESH:D004475
+xref: MIAA:0000173
+xref: NCIT:C12703
+xref: SCTID:362851007
+xref: TAO:0000016
+xref: UMLS:C0013574 {source="ncithesaurus:Ectoderm"}
+xref: VHOG:0000153
+xref: Wikipedia:Ectoderm
+xref: XAO:0000001
+xref: ZFA:0000016
+is_a: UBERON:0000923 ! germ layer
+relationship: develops_from UBERON:0006601 ! presumptive ectoderm
+relationship: has_part CL:0000221 ! ectodermal cell
+relationship: immediate_transformation_of UBERON:0006601 {source="Bgee:AN"} ! presumptive ectoderm
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png" xsd:anyURI
+property_value: external_definition "Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000137", ontology="AAO", source="AAO:EJS"}
+property_value: has_relational_adjective "ectodermal" xsd:string
+property_value: homology_notes "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000153", ontology="VHOG", source="ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:0014864
-name: caterpillar stage
+id: UBERON:0000925
+name: endoderm
namespace: uberon
-def: "The larval stage of members of the order Lepidoptera." [Wikipedia:Caterpillar]
-subset: life_stage
-synonym: "caterpillar" RELATED []
-xref: Wikipedia:Caterpillar
-is_a: UBERON:0000069 ! larval stage
-relationship: in_taxon NCBITaxon:7088 ! Lepidoptera
+def: "Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut." [Wikipedia:Endoderm]
+subset: efo_slim
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "entoderm" RELATED DEPRECATED [DOI:10.5962/bhl.title.1013]
+xref: AAO:0000139
+xref: BILA:0000038
+xref: BTO:0000800
+xref: CALOHA:TS-0273
+xref: EFO:0002545
+xref: EHDAA2:0000436
+xref: EMAPA:16062
+xref: EV:0100005
+xref: FBbt:00000125 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:69071
+xref: GAID:1305
+xref: MAT:0000175
+xref: MESH:D004707
+xref: MIAA:0000175
+xref: NCIT:C12706
+xref: SCTID:362855003
+xref: TAO:0000017
+xref: UMLS:C0014144 {source="ncithesaurus:Endoderm"}
+xref: VHOG:0000154
+xref: Wikipedia:Endoderm
+xref: XAO:0000090
+xref: ZFA:0000017
+is_a: UBERON:0000923 ! germ layer
+relationship: develops_from UBERON:0006595 ! presumptive endoderm
+relationship: has_part CL:0000223 ! endodermal cell
+relationship: immediate_transformation_of UBERON:0006595 {source="Bgee:AN"} ! presumptive endoderm
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png" xsd:anyURI
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png" xsd:anyURI
+property_value: has_relational_adjective "endodermal" xsd:string
+property_value: homology_notes "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000154", ontology="VHOG", source="ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722", source="http://bgee.unil.ch/"}
-[Term]
-id: UBERON:0016879
-name: future central nervous system
-namespace: uberon
-alt_id: UBERON:3000469
-def: "Primordium that develops into the central nervous system." [http://orcid.org/0000-0002-6601-2165]
-synonym: "future CNS" EXACT []
-synonym: "presumptive central nervous system" EXACT []
-is_a: UBERON:0006598 ! presumptive structure
-intersection_of: UBERON:0006598 ! presumptive structure
-intersection_of: has_potential_to_develop_into UBERON:0001017 ! central nervous system
-relationship: develops_from UBERON:0000924 ! ectoderm
-relationship: has_potential_to_develop_into UBERON:0001017 ! central nervous system
-relationship: part_of UBERON:0016880 ! future nervous system
+[Term]
+id: UBERON:0000926
+name: mesoderm
+namespace: uberon
+alt_id: UBERON:0003263
+def: "The middle germ layer of the embryo, between the endoderm and ectoderm." [Wikipedia:Mesoderm]
+subset: efo_slim
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "embryonic mesoderm" RELATED [VHOG:0000152]
+synonym: "entire mesoderm" RELATED [https://orcid.org/0000-0002-6601-2165, SCTID:362854004]
+synonym: "mesodermal mantle" RELATED []
+xref: AAO:0000304
+xref: BILA:0000037
+xref: BTO:0000839
+xref: CALOHA:TS-0623
+xref: EFO:0001981
+xref: EHDAA2:0001128
+xref: EHDAA:124
+xref: EHDAA:160
+xref: EHDAA:183
+xref: EMAPA:16083
+xref: EV:0100006
+xref: FBbt:00000126 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:69072
+xref: GAID:522
+xref: MAT:0000174
+xref: MESH:D008648
+xref: MIAA:0000174
+xref: NCIT:C12750
+xref: SCTID:362854004
+xref: TAO:0000041
+xref: UMLS:C0025485 {source="ncithesaurus:Mesoderm"}
+xref: VHOG:0000152
+xref: Wikipedia:Mesoderm
+xref: XAO:0000050
+xref: ZFA:0000041
+is_a: UBERON:0000923 {notes="sometimes not considered primary"} ! germ layer
+relationship: develops_from UBERON:0006603 ! presumptive mesoderm
+relationship: has_part CL:0000222 ! mesodermal cell
+relationship: immediate_transformation_of UBERON:0006603 {source="Bgee:AN"} ! presumptive mesoderm
+relationship: never_in_taxon NCBITaxon:6040
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png" xsd:anyURI
+property_value: external_definition "Primary germ layer that is the middle of the embryonic germ layers.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000304", ontology="AAO", source="AAO:EJS"}
+property_value: has_relational_adjective "mesodermal" xsd:string
+property_value: homology_notes "The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000152", ontology="VHOG", source="ISBN:978-0878932504 Gilbert SF, Developmental Biology (2006) Limb development and evolution, p.722", source="http://bgee.unil.ch/"}
+property_value: taxon_notes "sponges do not seem to have a mesoderm and accordingly Amphimedon lacks transcription factors involved in mesoderm development (Fkh, Gsc, Twist, Snail)[http://www.nature.com/nature/journal/v466/n7307/full/nature09201.html]. Mesoderm may not be homologous across verteberates" xsd:string {source="https://github.com/obophenotype/uberon/wiki/The-neural-crest"}
[Term]
-id: UBERON:0016880
-name: future nervous system
+id: UBERON:0000930
+name: stomodeum
namespace: uberon
-alt_id: UBERON:3000477
-def: "Primordium that develops into the nervous system." [http://orcid.org/0000-0002-6601-2165]
-synonym: "presumptive nervous system" EXACT [AAO:0000477]
-xref: AAO:0000477
-is_a: UBERON:0006598 ! presumptive structure
-intersection_of: UBERON:0006598 ! presumptive structure
-intersection_of: has_potential_to_develop_into UBERON:0001016 ! nervous system
-relationship: existence_starts_during_or_after UBERON:0000111 ! organogenesis stage
-relationship: has_potential_to_develop_into UBERON:0001016 ! nervous system
+def: "Anterior part of the embryonic digestive tract that develops into a mouth. The stomodeum includes as parts an invagination of the ectoderm and the stomodeal cavity." [http://orcid.org/0000-0002-6601-2165, https://github.com/obophenotype/uberon/issues/326, Wikipedia:Stomodeum]
+subset: grouping_class
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "mouth pit" RELATED [EMAPA:16263]
+synonym: "mouth primordium" EXACT [XAO:0000269]
+synonym: "oral ectoderm" RELATED [ZFA:0001290, ZFIN:ZDB-PUB-100726-23]
+synonym: "oral pit" RELATED [EMAPA:16263]
+synonym: "primitive oral cavity" EXACT [https://orcid.org/0000-0002-6601-2165]
+synonym: "stomatodeum" EXACT [Wikipedia:Stomodeum]
+synonym: "stomodaeum" EXACT []
+synonym: "stomodeal-hypophyseal primordium" BROAD [XAO:0000269]
+xref: BTO:0004224
+xref: EHDAA2:0001929
+xref: EMAPA:16263
+xref: FBbt:00000439 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:295846
+xref: NCIT:C34306
+xref: TAO:0001290
+xref: TGMA:0000135
+xref: UMLS:C1514977 {source="ncithesaurus:Stomodeum"}
+xref: Wikipedia:Stomodeum
+xref: XAO:0000269
+xref: ZFA:0001290
+is_a: UBERON:0013522 ! subdivision of tube
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0000924 ! ectoderm
+relationship: part_of UBERON:0035804 ! future mouth
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png" xsd:anyURI
+property_value: editor_note "consider indicating location. e.g. anterior. Note some AOs place this as part of oral opening, but it's not clear when this structure comes into existence" xsd:string
+property_value: external_definition "Anterior part of the embryonic alimentary canal formed as an invagination of the ectoderm; the future mouth.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001290", ontology="TAO", source="ZFIN:curator"}
+property_value: external_definition "the primordial mouth region of the developing head, initially a midline ectodermal depression between the forebrain bulge (cranially) and the heart bulge (caudally) and between the maxillary and mandibular components of the first pharyngeal arch; the stomodeum is separated from the anterior end of the foregut by the buccopharyngeal membrane; the mouth is developed partly from the stomodeum, and partly from the floor of the anterior portion of the foregut; the lips, teeth, and gums are formed from the walls of the stomodeum, but the tongue is developed in the floor of the pharynx" xsd:string {source="MP:0012522", taxon="NCBITaxon:40674"}
+property_value: has_relational_adjective "stomodeal" xsd:string
+property_value: taxon_notes "This class groups together disparate structures as all being the anterior part of the early metazoan digestive tract and precursor of the mouth. However, the developmental processes vary, so this class may be split in future. E.g. in mammals it is a rostral depression surrounded by prominences. Outgrowth of the prominences produces a stomodeal cavity." xsd:string
[Term]
-id: UBERON:0016887
-name: entire extraembryonic component
-namespace: http://www.xspan.org/obo.owl#
+id: UBERON:0000982
+name: skeletal joint
namespace: uberon
-def: "The part of the conceptus that may be lost before birth or will be discarded at birth, or when the embryo becomes an independent organism." [AEO:0000195, AEO:JB]
-synonym: "extra-embryonic component" EXACT []
-synonym: "extraembryonic component" EXACT [AEO:0000195]
-xref: AEO:0000195
-xref: EHDAA2:0000003
-xref: EMAPA:16042
-is_a: UBERON:0000481 {source="AEO"} ! multi-tissue structure
-relationship: adjacent_to UBERON:0002050 ! embryonic structure
-relationship: existence_starts_and_ends_during UBERON:0000068 ! embryo stage
-relationship: part_of UBERON:0004716 {source="AEO"} ! conceptus
-property_value: IAO:0000589 "entire extraembryonic component (AEO)" xsd:string
+def: "Anatomical structure that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO]." [GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070, VSAO:0000101, Wikipedia:Joint]
+subset: efo_slim
+subset: organ_slim
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "articular joint" RELATED [BTO:0001686]
+synonym: "articulation" BROAD [VSAO:0000101]
+synonym: "joint" BROAD [FMA:7490, VSAO:0000101]
+synonym: "joints" RELATED OMO:0003004 [ZFA:0001596]
+xref: AEO:0000182
+xref: BTO:0001686
+xref: CALOHA:TS-2023
+xref: EFO:0000948
+xref: EMAPA:35456
+xref: FMA:7490
+xref: GAID:102
+xref: galen:Joint
+xref: MA:0000319
+xref: MAT:0000188
+xref: MESH:D007596
+xref: MIAA:0000188
+xref: NCIT:C13044
+xref: RETIRED_EHDAA2:0003182
+xref: SCTID:302536002
+xref: TAO:0000367
+xref: UMLS:C0022417 {source="ncithesaurus:Joint"}
+xref: VHOG:0001276
+xref: VSAO:0000101
+xref: Wikipedia:Joint
+xref: XAO:0000171
+xref: ZFA:0001596
+is_a: UBERON:0004905 ! articulation
+relationship: connects UBERON:0004765 ! skeletal element
+relationship: contributes_to_morphology_of UBERON:0001434 ! skeletal system
+property_value: external_definition "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000101", ontology="VSAO", source="PSPUB:0000170"}
+property_value: external_definition "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000367", ontology="TAO", source="TAO:pem"}
+property_value: IAO:0000589 "skeletal joint (AEO)" xsd:string
[Term]
-id: UBERON:0018241
-name: prime adult stage
+id: UBERON:0001007
+name: digestive system
namespace: uberon
-def: "A life cycle stage that starts at completion of development and growth of the sexually mature adult animal, and ends before senescence." [Bgee:AN, https://github.com/obophenotype/uberon/issues/496]
-subset: life_stage
-synonym: "adulthood stage" RELATED []
-is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000113 ! post-juvenile adult stage
-property_value: dc:contributor https://github.com/ANiknejad
-property_value: dc:contributor https://github.com/cmungall
-property_value: dc:contributor https://github.com/fbastian
+def: "Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes." [FB:gg, NLM:alimentary+system, Wikipedia:Digestive_system]
+subset: efo_slim
+subset: human_reference_atlas
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "alimentary system" RELATED []
+synonym: "alimentary tract" RELATED []
+synonym: "gastrointestinal system" RELATED []
+synonym: "gut" RELATED []
+xref: AAO:0000129
+xref: BILA:0000082
+xref: BTO:0000058
+xref: CALOHA:TS-1293
+xref: EFO:0000793
+xref: FBbt:00005055 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:7152
+xref: GAID:278
+xref: galen:DigestiveSystem
+xref: MA:0002431
+xref: MAT:0000018
+xref: MESH:D004064
+xref: MIAA:0000018
+xref: ncithesaurus:Digestive_System
+xref: SCTID:278859004
+xref: TADS:0000170
+xref: TAO:0000339
+xref: WBbt:0005748
+xref: Wikipedia:Digestive_system
+xref: XAO:0000125
+xref: ZFA:0000339
+is_a: UBERON:0000467 ! anatomical system
+intersection_of: UBERON:0000467 ! anatomical system
+intersection_of: capable_of GO:0022600 ! digestive system process
+relationship: capable_of GO:0022600 ! digestive system process
+relationship: existence_ends_during UBERON:0000066 ! fully formed stage
+relationship: present_in_taxon NCBITaxon:9606
+property_value: external_definition "An anatomical system consisting of the alimentary canal and digestive glands responsible for intake, absorption, digestion and excretion of food.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000129", ontology="AAO", source="AAO:BJB"}
+property_value: external_ontology_notes "many anatomy ontologies consider gastrointestinal system synonymous with digestive system. here we follow MA in dividing digestive system into gastrointestinal and hepatobiliary. hepatobiliary includes the liver and biliary tract. species-specific AO classes are categorized according to whether liver is included. For example, XAO includes liver as part of XAO:0000125 alimentary system, so we assume this class is the more generic class" xsd:string {external_ontology="MA"}
+property_value: has_relational_adjective "digestive" xsd:string
[Term]
-id: UBERON:0018378
-name: crustacean larval stage
+id: UBERON:0001015
+name: musculature
namespace: uberon
-def: "The larval stage of a crustacean, the stages of which are separated my moults. Typically this goes through a nauplius - zoea - post-larval cycle." [Wikipedia:Crustacean_larvae]
-subset: life_stage
-is_a: UBERON:0000069 ! larval stage
-relationship: in_taxon NCBITaxon:6657 ! Crustacea
+def: "A subdivision of the muscular system corresponding to a subdisivision of an organism." [https://orcid.org/0000-0002-6601-2165, Wikipedia:Muscular_system]
+subset: efo_slim
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "muscle group" EXACT []
+synonym: "muscle system" RELATED []
+synonym: "muscles" RELATED []
+synonym: "muscles set" EXACT []
+synonym: "musculature" EXACT []
+synonym: "musculature system" RELATED []
+synonym: "musculi" EXACT OMO:0003011 [FMA:32558, FMA:TA]
+synonym: "set of muscles" EXACT [FMA:32558]
+synonym: "set of skeletal muscles" EXACT [MA:0000165]
+xref: BTO:0000887
+xref: EFO:0001949
+xref: EMAPA:35577
+xref: FMA:32558
+xref: MA:0000165
+xref: NCIT:C13056
+xref: TAO:0000548
+xref: UMLS:C0026845 {source="ncithesaurus:Muscle"}
+xref: VSAO:0005038
+xref: WBbt:0005737
+xref: Wikipedia:Muscular_system
+xref: ZFA:0000548
+is_a: UBERON:0011216 ! organ system subdivision
+relationship: composed_primarily_of UBERON:0001630 ! muscle organ
+relationship: mutually_spatially_disjoint_with UBERON:0001474
+relationship: part_of UBERON:0000383 ! musculature of body
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/e5/Muscles_anterior_labeled.png" xsd:anyURI
+property_value: external_ontology_notes "In FMA this is classified as a set of organs. ZFA musculature system has subtypes, so it is classified here. WBbt muscular system has subtypes so it goes here. Note that we use the MA term set of skeletal muscles here as it seems most appropriate (*not* MA:musculature). AAO is generally confused here." xsd:string {external_ontology="FMA"}
[Term]
-id: UBERON:0018685
-name: nursing stage
+id: UBERON:0001016
+name: nervous system
namespace: uberon
-def: "A mammalian developmental stage that covers the period from birth until weaning." [Bgee:AN]
-subset: life_stage
-synonym: "suckling stage" EXACT []
-is_a: UBERON:0000105 ! life cycle stage
-relationship: has_part UBERON:0007221 ! neonate stage
-relationship: in_taxon NCBITaxon:40674 ! Mammalia
-relationship: part_of UBERON:0000092 ! post-embryonic stage
+def: "The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organism, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO]." [BIRNLEX:844, ISBN:0-14-051288-8, ISBN:3110148986, NLM:nervous+system, WB:rynl, Wikipedia:Nervous_system, ZFIN:curator]
+subset: cumbo
+subset: efo_slim
+subset: human_reference_atlas
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "nerve net" NARROW [Wikipedia:Nerve_net]
+synonym: "neurological system" EXACT [GO:0050877]
+synonym: "systema nervosum" RELATED OMO:0003011 [Wikipedia:Nervous_system]
+xref: AAO:0000324
+xref: BILA:0000079
+xref: BIRNLEX:844
+xref: BTO:0001484
+xref: CALOHA:TS-1313
+xref: EFO:0000802
+xref: EHDAA2:0001246
+xref: EHDAA:826
+xref: EMAPA:16469
+xref: EV:0100162
+xref: FBbt:00005093 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:7157
+xref: GAID:466
+xref: MA:0000016
+xref: MAT:0000026
+xref: MESH:D009420
+xref: MIAA:0000026
+xref: NCIT:C12755
+xref: neuronames:3236
+xref: SCTID:278196006
+xref: TAO:0000396
+xref: UMLS:C0027763 {source="ncithesaurus:Nervous_System"}
+xref: VHOG:0000402
+xref: WBbt:0005735
+xref: Wikipedia:Nervous_system
+xref: XAO:0000177
+xref: ZFA:0000396
+is_a: UBERON:0000467 ! anatomical system
+relationship: capable_of GO:0050877 ! nervous system process
+relationship: composed_primarily_of CL:0002319 ! neural cell
+relationship: develops_from UBERON:0016880 ! future nervous system
+relationship: existence_ends_during UBERON:0000066 ! fully formed stage
+relationship: has_part CL:0000540 ! neuron
+relationship: immediate_transformation_of UBERON:0016880 {source="Bgee:AN"} ! future nervous system
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: never_in_taxon NCBITaxon:6040
+relationship: present_in_taxon NCBITaxon:9606
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg" xsd:anyURI
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png" xsd:anyURI
+property_value: external_definition "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000396", ontology="TAO", source="ZFIN:curator"}
+property_value: external_definition "Anatomical system consisting of nerve bodies and nerve fibers which regulate the response of the body to external and internal stimuli.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000324", ontology="AAO", source="AAO:BJB"}
+property_value: has_relational_adjective "nervous" xsd:string
+property_value: has_relational_adjective "neural" xsd:string
+property_value: homology_notes "Nervous systems evolved in the ancestor of Eumetazoa.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000402", ontology="VHOG", source="ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.117", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:0034919
-name: juvenile stage
+id: UBERON:0001017
+name: central nervous system
namespace: uberon
-def: "The stage of being no more dependent of the nest and/or from caregivers for subsistence while having not reach sexual maturity." [Bgee:AN, https://github.com/obophenotype/uberon/issues/645]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-relationship: part_of UBERON:0000112 ! sexually immature stage
-property_value: dc:contributor https://github.com/ANiknejad
-property_value: dc:contributor https://github.com/cmungall
+def: "The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord." [GO:0021551, http://www.frontiersinzoology.com/content/7/1/29, https://sourceforge.net/p/geneontology/ontology-requests/11422/]
+subset: cumbo
+subset: efo_slim
+subset: human_reference_atlas
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "cerebrospinal axis" NARROW [FMA:55675]
+synonym: "CNS" EXACT OMO:0003000 []
+synonym: "neuraxis" RELATED [FMA:55675]
+synonym: "systema nervosum centrale" EXACT OMO:0003011 [FMA:55675, FMA:TA]
+xref: AAO:0000090
+xref: BAMS:CNS
+xref: BILA:0000080
+xref: BIRNLEX:1099
+xref: BTO:0000227
+xref: CALOHA:TS-0150
+xref: EFO:0000908
+xref: EHDAA2:0000225
+xref: EHDAA:828
+xref: EMAPA:16470
+xref: EMAPA:16754
+xref: EV:0100163
+xref: FBbt:00005094 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:55675
+xref: GAID:570
+xref: MA:0000167
+xref: MAT:0000457
+xref: MESH:D002490
+xref: NCIT:C12438
+xref: neuronames:854
+xref: SCTID:278199004
+xref: TAO:0000012
+xref: UMLS:C0927232 {source="ncithesaurus:Central_Nervous_System", source="BIRNLEX:1099"}
+xref: VHOG:0000293
+xref: Wikipedia:Central_nervous_system
+xref: XAO:0000215
+xref: ZFA:0000012
+is_a: UBERON:0004121 ! ectoderm-derived structure
+is_a: UBERON:0011216 {source="FBbt", source="cjm"} ! organ system subdivision
+relationship: develops_from UBERON:0016879 ! future central nervous system
+relationship: immediate_transformation_of UBERON:0016879 {source="Bgee:AN"} ! future central nervous system
+relationship: in_taxon NCBITaxon:33213 ! Bilateria
+relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"}
+relationship: part_of UBERON:0001016 ! nervous system
+relationship: present_in_taxon NCBITaxon:9606
+property_value: external_definition "Part of the nervous system which includes the brain and spinal cord.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000090", ontology="AAO", source="AAO:BJB"}
+property_value: external_definition "The brain and spinal cord. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000012", ontology="TAO", source="ZFIN:curator"}
+property_value: external_definition "The central nervous system (CNS) is the part of the nervous system which includes the brain, spinal cord, and nerve cell layer of the retina (CUMBO)." xsd:string {source="BIRNLEX:1099"}
+property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...) (reference 1); The neural tube is destined to differentiate into the brain and spinal cord (the central nervous system) (reference 2); Taken together, our data make a very strong case that the complex molecular mediolateral architecture of the developing trunk CNS (central nervous system), as shared between Platynereis and vertebrates, was already present in their last common ancestor, Urbilateria. The concept of bilaterian nervous system centralization implies that neuron types concentrate on one side of the trunk, as is the case in vertebrates and many invertebrates including Platynereis, where they segregate and become spatially organized (as opposed to a diffuse nerve net). Our data reveal that a large part of the spatial organization of the annelid and vertebrate CNS was already present in their last common ancestor, which implies that Urbilateria had already possessed a CNS (reference 3).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000293", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28 (reference 1), ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.165 (reference 2), DOI:10.1016/j.cell.2007.02.040 Denes AS, Jekely G, Steinmetz PRH, Raible F, Snyman H, Prud'homme B, Ferrier DEK, Balavoine G and Arendt D, Molecular architecture of annelid nerve cord supports common origin of nervous system centralization in Bilateria. Cell (2007) (reference 3)", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:0034920
-name: infant stage
+id: UBERON:0001049
+name: neural tube
namespace: uberon
-def: "Nursing stage that follows the neonate stage in mammals and ends at weaning." [Bgee:AN, https://github.com/obophenotype/uberon/issues/644]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-relationship: immediately_preceded_by UBERON:0007221 ! neonate stage
-relationship: in_taxon NCBITaxon:40674 ! Mammalia
-relationship: part_of UBERON:0018685 ! nursing stage
-property_value: dc:contributor https://github.com/ANiknejad
-property_value: dc:contributor https://github.com/cmungall
+def: "In the developing vertebrate, the neural tube is the embryo's precursor to the central nervous system, which comprises the brain and spinal cord. The neural groove gradually deepens as the neural folds become elevated, and ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube, the neural tube or neural canal (which strictly speaking is the center of the neural tube), the ectodermal wall of which forms the rudiment of the nervous system. [WP,unvetted]." [Wikipedia:Neural_tube]
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "neural primordium" RELATED []
+synonym: "presumptive central nervous system" RELATED []
+synonym: "tubus neuralis" RELATED OMO:0003011 [Wikipedia:Neural_tube]
+xref: AAO:0010617
+xref: BTO:0001057
+xref: CALOHA:TS-2371
+xref: DHBA:10154
+xref: EHDAA2:0001254
+xref: EHDAA:2869
+xref: EHDAA:908
+xref: EMAPA:16164
+xref: EMAPA:16757
+xref: FMA:293882
+xref: MAT:0000069
+xref: MESH:D054259 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0001-9439-5346", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
+xref: MIAA:0000069
+xref: NCIT:C34226
+xref: neuronames:1365
+xref: SCTID:362852000
+xref: TAO:0001135
+xref: UMLS:C0231024 {source="ncithesaurus:Neural_Tube"}
+xref: VHOG:0000307
+xref: Wikipedia:Neural_tube
+xref: XAO:0003204
+xref: ZFA:0001135
+is_a: UBERON:0003914 {source="EHDAA2"} ! epithelial tube
+is_a: UBERON:0005291 ! embryonic tissue
+is_a: UBERON:0010371 ! ecto-epithelium
+is_a: UBERON:0016879 ! future central nervous system
+relationship: develops_from UBERON:0005068 ! neural rod
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png" xsd:anyURI
+property_value: development_notes "The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium" xsd:string {source="GO:0021915"}
+property_value: external_definition "Hollow epithelial tube on dorsal side of the embryo that develops into the central nervous system.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010617", ontology="AAO", source="AAO:JOR"}
+property_value: external_definition "The dorsal tubular structure in the vertebrate embryo that develops into the brain and spinal cord. [TFD][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000307", ontology="VHOG", source="http://bgee.unil.ch/", source="http://medical-dictionary.thefreedictionary.com/neural+tube"}
+property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000307", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:0034921
-name: multi organ part structure
+id: UBERON:0001062
+name: anatomical entity
namespace: uberon
-def: "An multicellular anatomical structure that has subparts of multiple organs as a part." [CARO:0020001]
+def: "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species." [FMA:62955, http://orcid.org/0000-0001-9114-8737]
subset: common_anatomy
-synonym: "anatomical cluster" RELATED [CARO:0020001]
-xref: CARO:0020001
-is_a: UBERON:0010000 {source="CARO"} ! multicellular anatomical structure
-relationship: composed_primarily_of UBERON:0000064 ! organ part
+subset: upper_level
+xref: AAO:0010841
+xref: AEO:0000000
+xref: BFO:0000004
+xref: BILA:0000000
+xref: BIRNLEX:6
+xref: CARO:0000000
+xref: EHDAA2:0002229
+xref: FBbt:10000000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:62955
+xref: HAO:0000000
+xref: MA:0000001
+xref: NCIT:C12219
+xref: TAO:0100000
+xref: TGMA:0001822
+xref: UMLS:C1515976 {source="ncithesaurus:Anatomic_Structure_System_or_Substance"}
+xref: WBbt:0000100
+xref: XAO:0000000
+xref: ZFA:0100000
+is_a: BFO:0000004 ! independent continuant
relationship: present_in_taxon NCBITaxon:33090
relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
relationship: present_in_taxon NCBITaxon:4751
+property_value: IAO:0000589 "anatomical entity (AEO)" xsd:string
[Term]
-id: UBERON:0034925
-name: anatomical collection
+id: UBERON:0001434
+name: skeletal system
namespace: uberon
-def: "A collection of anatomical structures that are alike in terms of their morphology or developmental origin." [http://orcid.org/0000-0002-6601-2165]
-subset: common_anatomy
-is_a: UBERON:0000465 ! material anatomical entity
-relationship: has_member UBERON:0000061 ! anatomical structure
-relationship: present_in_taxon NCBITaxon:33090
-relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
-relationship: present_in_taxon NCBITaxon:4751
-property_value: editor_note "resolve if this should be a subclass of disconnected anatomical group. Some collections (e.g. the skeleton or skull) are arguably connected" xsd:string
+def: "Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system." [GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070, VSAO:0000027]
+subset: efo_slim
+subset: human_reference_atlas
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "set of all bones and joints" NARROW SENSU []
+synonym: "skeleton system" EXACT []
+synonym: "Skelettsystem" RELATED [BTO:0001486]
+xref: AAO:0000566
+xref: BTO:0001486
+xref: CALOHA:TS-1320
+xref: EFO:0000806
+xref: EHDAA2:0003168
+xref: EMAPA:35773
+xref: FMA:23881
+xref: MA:0000018
+xref: NCIT:C12788
+xref: TAO:0000434
+xref: UMLS:C0037253 {source="ncithesaurus:Skeletal_System"}
+xref: VHOG:0001254
+xref: VSAO:0000027
+xref: XAO:0003060
+xref: ZFA:0000434
+is_a: UBERON:0011216 ! organ system subdivision
+intersection_of: UBERON:0011216 ! organ system subdivision
+intersection_of: has_part UBERON:0004288 ! skeleton
+intersection_of: has_part UBERON:0004770 ! articular system
+relationship: existence_ends_during UBERON:0000066 ! fully formed stage
+relationship: has_part UBERON:0004288 ! skeleton
+relationship: has_part UBERON:0004770 ! articular system
+relationship: mutually_spatially_disjoint_with UBERON:0001016 ! nervous system
+relationship: part_of UBERON:0002204 ! musculoskeletal system
+relationship: present_in_taxon NCBITaxon:9606
+property_value: external_definition "Anatomical system consisting of multiple elements and tissues that provides physical support.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000434", ontology="TAO", source="TAO:wd"}
+property_value: external_definition "Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000027", ontology="VSAO", source="GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070", source="PSPUB:0000170"}
+property_value: external_definition "System that provides physical support to the organism.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000566", ontology="AAO", source="AAO:LAP"}
+property_value: external_ontology_notes "GO defines skeletal system very generically: The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) GO:0001501; however, all annotations are to vertebrates" xsd:string {external_ontology="GO"}
+property_value: has_relational_adjective "skeletal" xsd:string
+property_value: homology_notes "By taking a holistic approach, integration of the evidence from molecular and developmental features of model organisms, the phylogenetic distribution in the 'new animal phylogeny' and the earliest fossilized remains of mineralized animal skeletons suggests independent origins of the skeleton at the phylum level.[debated][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001254", ontology="VHOG", source="DOI:10.1159/000324245 Donoghue PCJ, Sansom IJ, Origin and early evolution of vertebrate skeletonization. Microscopy research and technique (2002)", source="http://bgee.unil.ch/"}
+property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/The-skeletal-system" xsd:anyURI
[Term]
-id: UBERON:0034969
-name: epithelial layer of duct
+id: UBERON:0001555
+name: digestive tract
namespace: uberon
-synonym: "duct epithelium" RELATED []
-synonym: "ductal epithelium" RELATED []
-xref: NCIT:C25787
-xref: UMLS:C1512086
-is_a: UBERON:0003914 ! epithelial tube
-intersection_of: UBERON:0000483 ! epithelium
-intersection_of: part_of UBERON:0000058 ! duct
-relationship: part_of UBERON:0000058 ! duct
+def: "A tube extending from the mouth to the anus." [https://github.com/geneontology/go-ontology/issues/7549, Wikipedia:Talk\:Human_gastrointestinal_tract]
+subset: human_reference_atlas
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "alimentary canal" NARROW []
+synonym: "alimentary tract" NARROW []
+synonym: "digestive canal" RELATED [BTO:0000058]
+synonym: "digestive tube" EXACT []
+synonym: "enteric tract" EXACT [ZFA:0000112]
+synonym: "gut" BROAD []
+synonym: "gut tube" RELATED []
+xref: AAO:0010023
+xref: BILA:0000083
+xref: BTO:0000511
+xref: BTO:0000545
+xref: EHDAA2:0000726
+xref: EHDAA:518
+xref: EMAPA:16247
+xref: FBbt:00003125 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:45615
+xref: galen:AlimentaryTract
+xref: MA:0000917
+xref: MESH:D041981 {sssom:mapping_provider="https://github.com/biopragmatics/biomappings", sssom:mapping_justification="https://w3id.org/semapv/vocab/LexicalMatching"}
+xref: NCIT:C34082
+xref: TAO:0000112
+xref: TGMA:0001819
+xref: UMLS:C0017189 {source="ncithesaurus:Gastrointestinal_Tract"}
+xref: VHOG:0000309
+xref: WBbt:0005743
+xref: ZFA:0000112
+is_a: UBERON:0000025 ! tube
+relationship: connects UBERON:0000165 ! mouth
+relationship: develops_from UBERON:0007026 ! presumptive gut
+relationship: immediate_transformation_of UBERON:0007026 {source="NCBIBook:NBK10107"} ! presumptive gut
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: never_in_taxon NCBITaxon:147099 {source="Wikipedia:Acoelomorpha"}
+relationship: never_in_taxon NCBITaxon:41324 {source="DOI:10.1371/journal.pone.0016309"}
+relationship: part_of UBERON:0001007 ! digestive system
+relationship: present_in_taxon NCBITaxon:9606
+property_value: external_definition "The alimentary or digestive tract, and associated organs.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000112", ontology="TAO", source="ZFIN:curator"}
+property_value: external_ontology_notes "FMA also has a term 'gastrointestinal tract', but this includes the liver." xsd:string {external_ontology="FMA"}
+property_value: external_ontology_notes "we place the MA and EMAPA class here, although the intent is probably a smaller region. See https://github.com/obophenotype/uberon/issues/509" xsd:string {external_ontology="MA"}
+property_value: homology_notes "The bilaterian gut is typically a complete tube that opens to the exterior at both ends. It consists of mouth, foregut, midgut, hindgut, and anus (reference 1); Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut (reference 2).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000309", ontology="VHOG", source="ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.203, ISBN:978-0521617147 Stevens CE and Hume ID, Comparative physiology of the vertebrate digestive system (2004) p.11", source="http://bgee.unil.ch/"}
+property_value: terminology_notes "we following Kardong in naming the entire tube from mouth to anus the alimentary canal. Kardong calls the portion of this tract that excludes buccal cavity and pharynx the 'alimentary canal', consider adding an extra class for this" xsd:string
[Term]
-id: UBERON:0035804
-name: future mouth
+id: UBERON:0001630
+name: muscle organ
namespace: uberon
-def: "The primordial mouth region of the developing head." [MP:0003119]
-synonym: "primitive mouth" EXACT [FMA:293105]
-synonym: "primordial mouth" EXACT []
-xref: FMA:293105
-is_a: UBERON:0013522 ! subdivision of tube
-relationship: has_part UBERON:0000925 ! endoderm
-relationship: has_part UBERON:0000930 ! stomodeum
-relationship: part_of UBERON:0007026 ! presumptive gut
+def: "Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO]." [GO:0007517]
+subset: organ_slim
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "muscle" BROAD [ZFA:0005145]
+xref: EMAPA:37474 {source="MA:th"}
+xref: EV:0100146
+xref: FMA:5022
+xref: GAID:131
+xref: galen:Muscle
+xref: MA:0000015
+xref: SCTID:71616004
+xref: TAO:0005145
+xref: VHOG:0001245
+xref: XAO:0000172
+xref: ZFA:0005145
+is_a: UBERON:0000062 ! organ
+is_a: UBERON:0005090 ! muscle structure
+intersection_of: UBERON:0000062 ! organ
+intersection_of: composed_primarily_of UBERON:0002385 ! muscle tissue
+relationship: composed_primarily_of UBERON:0002385 ! muscle tissue
+relationship: part_of UBERON:0001015 ! musculature
+property_value: external_definition "Portion of tissue composed of contractile fibers.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005145", ontology="TAO", source="ZFIN:curator"}
+property_value: has_relational_adjective "muscular" xsd:string
+property_value: homology_notes "It seems clear that the metazoan ancestor inherited from its unicellular descendants an actin cytoskeleton and motor-proteins of the myosin superfamily. Within metazoans, these two molecules were arranged into effective contractile units, the muscles. The basic trends for muscle evolution are already expressed in the diploblastic taxa.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001245", ontology="VHOG", source="ISBN:978-0198566694 Schmidt-Rhaesa A, The evolution of organ systems (2007) p.75", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:8000000
-name: first instar larva stage
+id: UBERON:0002050
+name: embryonic structure
namespace: uberon
-def: "The first stage of instar larva stage." [IDOMAL:0000656]
-subset: life_stage
-is_a: UBERON:0004730 ! instar larval stage
-relationship: dc-contributor https://orcid.org/0000-0001-5208-3432
+def: "Anatomical structure that is part of an embryo." [BTO:0000174, ZFIN:curator]
+subset: efo_slim
+subset: inconsistent_with_fma
+subset: vertebrate_core
+synonym: "developing embryonic structure" EXACT [FBbt:00004208]
+synonym: "developing structure" RELATED []
+synonym: "embryonale Struktur" RELATED [BTO:0000174]
+synonym: "embryonic anatomical structure" EXACT [RETIRED_EHDAA2:0003169]
+synonym: "embryonic structures" RELATED OMO:0003004 [ZFA:0001105]
+xref: AAO:0000138
+xref: BILA:0000034
+xref: BTO:0000174
+xref: CALOHA:TS-2110
+xref: EFO:0000461
+xref: FBbt:00004208 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:69067
+xref: GAID:407
+xref: MESH:D004628
+xref: NCIT:C13229
+xref: RETIRED_EHDAA2:0003169
+xref: SCTID:667009
+xref: TAO:0001105
+xref: UMLS:C0013948 {source="ncithesaurus:Embryonic_Structure"}
+xref: VSAO:0000178
+xref: XAO:0003042
+xref: ZFA:0001105
+is_a: UBERON:0005423 ! developing anatomical structure
+intersection_of: UBERON:0005423 ! developing anatomical structure
+intersection_of: part_of UBERON:0000922 ! embryo
+relationship: part_of UBERON:0000922 ! embryo
+property_value: external_definition "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000138", ontology="AAO", source="AAO:BJB"}
+property_value: external_definition "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001105", ontology="TAO", source="ZFIN:curator"}
+property_value: external_definition "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000178", ontology="VSAO", source="ZFIN:curator"}
+property_value: external_ontology_notes "in FMA embryo is_a embryonic structure" xsd:string {external_ontology="FMA"}
[Term]
-id: UBERON:8000001
-name: second instar larva stage
+id: UBERON:0002204
+name: musculoskeletal system
namespace: uberon
-def: "The second stage of instar larva stage." [IDOMAL:0000657]
-subset: life_stage
-is_a: UBERON:0004730 ! instar larval stage
-relationship: dc-contributor https://orcid.org/0000-0001-5208-3432
+def: "Anatomical system that consists of the muscular and skeletal systems." [https://github.com/obophenotype/uberon/issues/77, VSAO:0000031, VSAO:curator]
+subset: uberon_slim
+synonym: "musculo-skeletal system" EXACT []
+xref: AAO:0010546
+xref: CALOHA:TS-1311
+xref: EMAPA:32714
+xref: EV:0100139
+xref: FMA:7482
+xref: GAID:98
+xref: MA:0002418
+xref: MESH:D009141
+xref: NCIT:C12754
+xref: SCTID:278858007
+xref: UMLS:C0026860 {source="ncithesaurus:Musculoskeletal_System"}
+xref: VHOG:0001275
+xref: VSAO:0000031
+xref: Wikipedia:Musculoskeletal_system
+xref: XAO:0000168
+is_a: UBERON:0000467 ! anatomical system
+relationship: capable_of_part_of GO:0040011 ! locomotion
+relationship: existence_ends_during UBERON:0000066 ! fully formed stage
+relationship: has_developmental_contribution_from UBERON:0000926 {notes="check ctenophore"} ! mesoderm
+relationship: has_part UBERON:0000383 ! musculature of body
+relationship: has_part UBERON:0001434 ! skeletal system
+property_value: dc:contributor https://github.com/cmungall
+property_value: external_definition "Anatomical system that provides locomotion and physical support to the organism.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010546", ontology="AAO", source="AAO:EJS"}
+property_value: has_relational_adjective "musculoskeletal" xsd:string
+property_value: homology_notes "There are more than 50,000 extant vertebrate species, representing over 500 million years of evolution. During that time, the vertebrate musculoskeletal systems have adapted to aquatic, terrestrial, fossorial, and arboreal lifestyles, while simultaneously retaining functionally integrated axial and appendicular skeletal systems.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001275", ontology="VHOG", source="DOI:10.1002/jez.b.21246 Shearman RM, Burke AC, The lateral somitic frontier in ontogeny and phylogeny. Journal of Experimental Zoology (2009)", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:8000002
-name: third instar larva stage
+id: UBERON:0002328
+name: notochord
namespace: uberon
-def: "The third stage of instar larva stage." [IDOMAL:0000658]
-subset: life_stage
-synonym: "third instar larva" EXACT []
-is_a: UBERON:0004730 ! instar larval stage
-relationship: dc-contributor https://orcid.org/0000-0001-5208-3432
+def: "A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube." [http://tolweb.org/Chordata/2499, https://github.com/obophenotype/uberon/issues/25, https://github.com/obophenotype/uberon/issues/271, ISBN:0815318960, Wikipedia:Notochord]
+comment: The notochord appears early in embryogeny and plays an important role in promoting or organizing the embryonic development of nearby structures. In most adult chordates the notochord disappears or becomes highly modified. In some non-vertebrate chordates and fishes the notochord persists as a laterally flexible but incompressible skeletal rod that prevents telescopic collapse of the body during swimming[TOLWEB]
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "embryonic notocord" EXACT []
+synonym: "notochorda" RELATED OMO:0003011 [Wikipedia:Notochord]
+synonym: "notocord" EXACT [ZFA:0000135]
+xref: AAO:0000327
+xref: BTO:0001768
+xref: CALOHA:TS-0690
+xref: EHDAA2:0001277
+xref: EHDAA:1241
+xref: EHDAA:6021
+xref: EMAPA:16191
+xref: EV:0100002
+xref: FMA:85521
+xref: GAID:1311
+xref: http://evolution.berkeley.edu/evolibrary/images/history/notochords.jpg
+xref: MAT:0000281
+xref: MESH:D009672
+xref: NCIT:C12463
+xref: SCTID:308820002
+xref: TAO:0000135
+xref: UMLS:C0028439 {source="ncithesaurus:Notochord"}
+xref: VHOG:0000199
+xref: VSAO:0000032
+xref: Wikipedia:Notochord
+xref: XAO:0000055
+xref: ZFA:0000135
+is_a: UBERON:0000062 {source="PMID:15890825"} ! organ
+is_a: UBERON:0000481 {source="VSAO"} ! multi-tissue structure
+is_a: UBERON:0004120 ! mesoderm-derived structure
+is_a: UBERON:0004121 ! ectoderm-derived structure
+relationship: develops_from UBERON:0004880 {source="ZFA"} ! chordamesoderm
+relationship: develops_from UBERON:0006267 {source="EHDAA2"} ! notochordal plate
+relationship: dorsal_to UBERON:0001555 ! digestive tract
+relationship: existence_starts_during UBERON:0000068 ! embryo stage
+relationship: in_taxon NCBITaxon:7711 {source="http://tolweb.org/Chordata/2499"} ! Chordata
+relationship: part_of NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0011137 ! axial skeletal system
+relationship: produces PR:000014841 ! sonic hedgehog protein
+relationship: ventral_to UBERON:0001049 ! neural tube
+property_value: axiom_lost_from_external_ontology "relationship type change: differentiates_from mesoderm (AAO:0000304) CHANGED TO: develops_from mesoderm (UBERON:0000926)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000327", ontology="AAO"}
+property_value: dc:contributor https://github.com/cmungall
+property_value: dc:contributor https://github.com/wdahdul
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png" xsd:anyURI
+property_value: development_notes "In between vertebra the notochord becomes the nucleus pulposus, under it degenerates, and at anterior end in some species its tissue merges with some of the cranial bones.. Some organisms retain a post-embryonic notochord." xsd:string
+property_value: external_definition "Avascular multi-tissue structure composed of large vacuolated epithelial cells (chordablasts) and perichordal fibrous tissue.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000032", ontology="VSAO", source="PSPUB:0000170"}
+property_value: external_definition "Rod-like principal supportive element of the embryo and larva, present in the midline just ventral to the neural tube, and differentiating during the segmentation period to form large vacuolated epithelial cells and a surrounding a sheath of fibrous and elastic layers. Layering of the sheath may differ in structure, thickness and development among groups; in cypriniforms there are actually three very thin layers to the sheath. A functional, well developed notochord is present throughout life in certain basal fish groups but not in cypriniforms. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000135", ontology="TAO", source="ZFIN:curator"}
+property_value: external_definition "Slender rod of fibrous connective tissue surrounding a core of fluid-filled cells of mesodermal origin; it lies above the gut and directly beneath the spinal cord. The notochord is present during early development and in a few cases it is retained through life; however, usually the notochord is replaced by the vertebral column.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000327", ontology="AAO", source="AAO:LAP"}
+property_value: has_relational_adjective "notochordal" xsd:string
+property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (3) a stiff, longitudinal rod of turgid cells along the dorsal part of the body that is called a notochord (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000199", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:8000003
-name: fourth instar larva stage
+id: UBERON:0002346
+name: neurectoderm
namespace: uberon
-def: "The fourth stage of instar larva stage." [IDOMAL:0000659]
-subset: life_stage
-synonym: "fourth instar larva" EXACT []
-is_a: UBERON:0004730 ! instar larval stage
-relationship: dc-contributor https://orcid.org/0000-0001-5208-3432
+def: "Embryonic ectoderm that gives rise to nervous tissue." [Wikipedia:Neuroectoderm]
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "epithelium tubi neuralis; neuroectoderma" RELATED OMO:0003011 [Wikipedia:Neuroectoderm]
+synonym: "neuaral ectoderm" RELATED []
+synonym: "neural ectoderm" EXACT []
+synonym: "neuroectoderm" EXACT []
+synonym: "presumptive central nervous system" RELATED []
+synonym: "ventral neurogenic region" RELATED [VHOG:0000150]
+xref: AAO:0011074
+xref: BILA:0000039
+xref: CALOHA:TS-1212
+xref: EHDAA2:0001248
+xref: EHDAA:1498
+xref: EHDAA:255
+xref: EMAPA:16073
+xref: EV:0100004
+xref: FBbt:00001057 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:87657
+xref: MAT:0000176
+xref: MIAA:0000176
+xref: NCIT:C34228
+xref: TAO:0001120
+xref: UMLS:C1518271 {source="ncithesaurus:Neuroectoderm"}
+xref: VHOG:0000150
+xref: Wikipedia:Neuroectoderm
+xref: XAO:0000042
+xref: ZFA:0001120
+is_a: UBERON:0000923 ! germ layer
+is_a: UBERON:0004121 ! ectoderm-derived structure
+relationship: has_part CL:0000133 ! neurectodermal cell
+property_value: has_relational_adjective "neurectodermal" xsd:string
+property_value: homology_notes "(...) the ability of ectoderm to produce neuronal cells is a general metazoan feature.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000150", ontology="VHOG", source="DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)", source="http://bgee.unil.ch/"}
+property_value: terminology_notes "we prefer neurectoderm to neural ectoderm since placodal ectoderm is not classified here" xsd:string
[Term]
-id: UBERON:8200002
-name: copepodite stage 1
+id: UBERON:0002385
+name: muscle tissue
+namespace: http://www.xspan.org/obo.owl#
namespace: uberon
-def: "A development stage of copepods which immediately follows the nauplius stage. It is characterized by the presence of 2 swimming legs." [http://orcid.org/0000-0002-2908-3327]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
-relationship: in_taxon NCBITaxon:6830 ! Copepoda
-relationship: part_of UBERON:0014860 ! copepodite stage
-relationship: preceded_by UBERON:0014406 ! nauplius stage
-property_value: dcterms-date "2021-07-26T14:57:48Z" xsd:dateTime
+def: "Muscle tissue is a contractile tissue made up of actin and myosin fibers[GO]." [GO:0060537, https://sourceforge.net/tracker/index.php?func=detail&aid=2801266&group_id=36855&atid=440764, Wikipedia:Muscle_tissue]
+comment: Vertebrate muscle is categorized into three major muscle types defined by their structural and functional properties: skeletal, cardiac and smooth. In Dmel the counterparts are somatic, heart/cardiac and visceral. Here we take a cell type based approach.
+subset: uberon_slim
+synonym: "muscular tissue" EXACT SENSU []
+synonym: "portion of muscle tissue" EXACT [FMA:9641]
+synonym: "textus muscularis" EXACT []
+xref: AAO:0000306
+xref: AEO:0000122
+xref: CALOHA:TS-0642
+xref: EHDAA2:0003122
+xref: EMAPA:32715
+xref: FMA:9641
+xref: galen:MuscleTissue
+xref: MA:0002437
+xref: MESH:D009132
+xref: NCIT:C12435
+xref: SCTID:91727004
+xref: UMLS:C2328219 {source="ncithesaurus:Muscle_Tissue"}
+xref: Wikipedia:Muscle_tissue
+is_a: UBERON:0000479 ! tissue
+is_a: UBERON:0004120 ! mesoderm-derived structure
+intersection_of: UBERON:0000479 ! tissue
+intersection_of: composed_primarily_of CL:0000187 ! muscle cell
+relationship: capable_of GO:0006936 ! muscle contraction
+relationship: composed_primarily_of CL:0000187 ! muscle cell
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: mutually_spatially_disjoint_with UBERON:0003714
+relationship: part_of UBERON:0001015 ! musculature
+property_value: external_definition "One of the four types of tissue in traditional classifications. Tissue that contains cells with contractile filaments that move past each other and change the size of the cell. Muscle tissue also is separated into three distinct categories.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000306", ontology="AAO", source="AAO:LAP"}
+property_value: IAO:0000589 "muscle tissue (AEO)" xsd:string
[Term]
-id: UBERON:8200003
-name: copepodite stage 2
+id: UBERON:0002532
+name: epiblast (generic)
namespace: uberon
-def: "A development stage of copepods which immediately follows copepodite stage 1. It is characterized by the presence of 3 swimming legs." [http://orcid.org/0000-0002-2908-3327]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
-relationship: in_taxon NCBITaxon:6830 ! Copepoda
-relationship: part_of UBERON:0014860 ! copepodite stage
-relationship: preceded_by UBERON:8200002 ! copepodite stage 1
-property_value: dcterms-date "2021-07-26T15:07:18Z" xsd:dateTime
+def: "In amniote animal embryology, the epiblast is a tissue type derived either from the inner cell mass in mammals or the blastodisc in birds and reptiles. It lies above the hypoblast. In mammalian embryogenesis, the columnar cells of the epiblast are adjacent to the trophoblast, while the cuboidal cells of the hypoblast are closer to the blastocoele. The epiblast, whilst referred to as the primary ectoderm, differentiates to form all three layers of the trilaminar germ disc in a process called gastrulation[WP]. The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation[ZFA]." [Wikipedia:Epiblast, ZFIN:curator]
+subset: early_development
+subset: grouping_class
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "blastocyst" RELATED []
+synonym: "ectoblast" RELATED [MP:0003886]
+synonym: "epiblast" EXACT [VHOG:0000243]
+synonym: "epiblastus" RELATED OMO:0003011 [Wikipedia:Epiblast]
+synonym: "primitive ectoderm" RELATED [VHOG:0000243]
+xref: BTO:0004593
+xref: FMA:296704
+xref: MAT:0000067
+xref: MIAA:0000067
+xref: VHOG:0000243
+xref: Wikipedia:Epiblast
+is_a: UBERON:0002050 ! embryonic structure
+relationship: has_part CL:0000352 ! epiblast cell
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png" xsd:anyURI
+property_value: editor_note "MP says - tissue that gives rise to the ectoderm, endoderm and mesoderm of the embryo proper. In HOG, epiblast is part of primitive streak/blastpore, which is inconsistent with the MP definition of primitive streak as a ridge of the epiblast. Note that these terms, epiblast and hypoblast, are also used to describe layers of the avian embryonic blastoderm, but the layers so-named seem to be altogether different in these two kinds of vertebrate embryos(CVS). Consider obsoleting this as a grouping class" xsd:string
+property_value: homology_notes "In pregastrula zebrafish embryos, the epiblast is an inverted cup of cells that sits on top of a large yolk cell. (...) In amniote embryos (mammals and birds), gastrulation initiates in an epithelial layer called the epiblast. Cells in the epiblast undergo an epithelial to mesenchymal transition (EMT), migrate through the primitive streak (PS), and incorporate in the middle (mesoderm) or outer (endoderm) layer. The presumptive definitive endoderm (DE) cells invade and displace an outer layer of extraembryonic tissue cells, the hypoblast in chick and the visceral endoderm (VE) in mouse, which form supporting structures such as the yolk sac.[uncertain][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000243", ontology="VHOG", source="DOI:10.1146/annurev.cellbio.042308.113344 Zorn AM, Wells JM, Vertebrate endoderm development and organ formation. Annual Review of Cell Developmental Biology (2009)", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:8200004
-name: copepodite stage 3
+id: UBERON:0002548
+name: larva
+namespace: http://www.xspan.org/obo.owl#
namespace: uberon
-def: "A development stage of copepods which immediately follows copepodite stage 2. It is characterized by the presence of 4 swimming legs." [http://orcid.org/0000-0002-2908-3327]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
-relationship: in_taxon NCBITaxon:6830 ! Copepoda
-relationship: part_of UBERON:0014860 ! copepodite stage
-relationship: preceded_by UBERON:8200003 ! copepodite stage 2
-property_value: dcterms-date "2021-07-26T15:43:37Z" xsd:dateTime
+def: "A distinct juvenile form many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle." [Wikipedia:Larva]
+subset: uberon_slim
+synonym: "ammocoete" NARROW [Wikipedia:Larva]
+synonym: "bipinnaria" NARROW [Wikipedia:Larva]
+synonym: "caterpillar" NARROW [Wikipedia:Larva]
+synonym: "glochidium" NARROW [Wikipedia:Larva]
+synonym: "grub" NARROW [Wikipedia:Larva]
+synonym: "larval organism" EXACT [TAO:0002048]
+synonym: "leptocephalus" NARROW [Wikipedia:Larva]
+synonym: "maggot" NARROW [Wikipedia:Larva]
+synonym: "naiad" NARROW [Wikipedia:Larva]
+synonym: "nymph" NARROW [Wikipedia:Larva]
+synonym: "planula" NARROW [Wikipedia:Larva]
+synonym: "tadpole" NARROW [Wikipedia:Larva]
+synonym: "trochophore" NARROW [Wikipedia:Larva]
+synonym: "veliger" NARROW [Wikipedia:Larva]
+synonym: "wriggler" NARROW [Wikipedia:Larva]
+synonym: "zoea" NARROW [Wikipedia:Larva]
+xref: AEO:0000126
+xref: BTO:0000707
+xref: FBbt:00001727 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: HAO:0000459
+xref: MESH:D007814 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0001-9439-5346", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
+xref: TAO:0002048
+xref: Wikipedia:Larva
+is_a: UBERON:0000468 ! multicellular organism
+is_a: UBERON:0005423 ! developing anatomical structure
+intersection_of: UBERON:0000468 ! multicellular organism
+intersection_of: existence_starts_and_ends_during UBERON:0000069 ! larval stage
+relationship: existence_starts_and_ends_during UBERON:0000069 ! larval stage
+relationship: has_quality PATO:0001185 ! larval
+property_value: editor_note "TODO discriminate between stages and organisms" xsd:string
+property_value: external_definition "Whole organism that is premetamorphic or a very immature individual.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0002048", ontology="TAO", source="TAO:wd"}
+property_value: has_relational_adjective "larval" xsd:string
+property_value: IAO:0000589 "larva (AEO)" xsd:string
[Term]
-id: UBERON:8200005
-name: copepodite stage 4
+id: UBERON:0002553
+name: anatomical cavity
namespace: uberon
-def: "A development stage of copepods which immediately follows copepodite stage 3. It is characterized by the presence of 5 swimming legs." [http://orcid.org/0000-0002-2908-3327]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
-relationship: in_taxon NCBITaxon:6830 ! Copepoda
-relationship: part_of UBERON:0014860 ! copepodite stage
-relationship: preceded_by UBERON:8200004 ! copepodite stage 3
-property_value: dcterms-date "2021-07-26T15:45:12Z" xsd:dateTime
+def: "Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina." [FMA:67552]
+subset: upper_level
+synonym: "cavity" BROAD []
+xref: BIRNLEX:1011
+xref: EMAPA:37442 {source="MA:th"}
+xref: FMA:67552
+xref: galen:Cavity
+xref: MA:0002447
+xref: NCIT:C34007
+is_a: UBERON:0000464 ! anatomical space
+relationship: location_of UBERON:0000463 ! organism substance
[Term]
-id: UBERON:8200006
-name: copepodite stage 5
+id: UBERON:0003068
+name: axial mesoderm
namespace: uberon
-def: "A pre-adult stage of copepods which immediately follows copepodite stage 4. It is characterized by enlargement of the urosome and development of sexual organs." [http://orcid.org/0000-0002-2908-3327]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
-relationship: in_taxon NCBITaxon:6830 ! Copepoda
-relationship: part_of UBERON:0000113 ! post-juvenile adult stage
-relationship: preceded_by UBERON:8200005 ! copepodite stage 4
-property_value: dcterms-date "2021-07-26T15:46:40Z" xsd:dateTime
+def: "The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord." [GO:0048318, Wikipedia:Chordamesoderm]
+subset: efo_slim
+subset: uberon_slim
+synonym: "chordamesoderm" RELATED [Wikipedia:Chordamesoderm]
+xref: AAO:0011017
+xref: EFO:0003647
+xref: TAO:0001204
+xref: VHOG:0000107
+xref: Wikipedia:Chordamesoderm
+xref: XAO:0000205
+xref: ZFA:0001204
+is_a: UBERON:0002050 ! embryonic structure
+relationship: develops_from UBERON:0000926 ! mesoderm
+relationship: in_taxon NCBITaxon:7711 ! Chordata
+relationship: part_of UBERON:0000926 ! mesoderm
+property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png" xsd:anyURI
+property_value: external_definition "The portion of the mesoderm underlying the midline of the embryo. [Gastrulation:_From_cells_to_embryo_(2004)_Cold_Spring_Harbor, Glossary_XV, New_York:_Cold_Spring_Harbor_Laboratory_Press, Stern_CD][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000107", ontology="VHOG", source="http://bgee.unil.ch/"}
[Term]
-id: UBERON:8200007
-name: copepodite stage 6
+id: UBERON:0003075
+name: neural plate
namespace: uberon
-def: "A fully formed stage of copepods which immediately follows copepodite stage 5. It is characterized by the complete development of the fifth swimming leg." [http://orcid.org/0000-0002-2908-3327]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
-relationship: in_taxon NCBITaxon:6830 ! Copepoda
-relationship: part_of UBERON:0000066 ! fully formed stage
-relationship: preceded_by UBERON:8200006 ! copepodite stage 5
-property_value: dcterms-date "2021-07-26T15:48:54Z" xsd:dateTime
-
-[Term]
-id: WBls:0000001
-name: free-living nematode stage
-namespace: worm_development
-def: "The nematode life-cycle stage that occurs entirely outside of a host organism." [WB:jl]
-is_a: WBls:0000101 ! Nematode life stage
-created_by: jl16
-creation_date: 2015-03-19T10:42:18Z
-
-[Term]
-id: WBls:0000002
-name: all stages Ce
-namespace: worm_development
-def: "All C. elegans development stages, including embryo, larva and adult stage." [WB:wjc]
-subset: life_stage
-synonym: "all stages" BROAD []
-is_a: UBERON:0000105 ! life cycle stage
-is_a: WBls:0000825 ! C. elegans life stage
-intersection_of: UBERON:0000105 ! life cycle stage
-intersection_of: BFO:0000066 NCBITaxon:6237 ! occurs in Caenorhabditis
-relationship: BFO:0000066 NCBITaxon:6237 ! occurs in Caenorhabditis
-property_value: IAO:0000589 "life cycle stage (worm)" xsd:string
-
-[Term]
-id: WBls:0000004
-name: proliferating embryo Ce
-namespace: worm_development
-def: "The C. elegans life stage spanning 0-350min after first cleavage at 20 Centigrade. Proliferate from 1 cell to 560 cells. From start of first cleavage until cleavage is over." [WB:wjc]
-synonym: "early embryo" EXACT []
-synonym: "proliferating embryo" BROAD []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000812 ! C. elegans life stage occurring during proliferating embryo
-relationship: part_of WBls:0000092 ! Brugia embryo
-
-[Term]
-id: WBls:0000005
-name: blastula embryo Ce
-namespace: worm_development
-def: "The C. elegans life stage spanning 0-100min after first cleavage at 20 Centigrade. Proliferate from 1 cell to 28 cells. From first cleavage until the start of gastrulation." [WB:wjc]
-subset: life_stage
-synonym: "blastula embryo" BROAD []
-is_a: UBERON:0000108 ! blastula stage
-is_a: WBls:0000002 ! all stages Ce
-is_a: WBls:0000813 ! C. elegans life stage occurring during blastula embryo
-intersection_of: UBERON:0000108 ! blastula stage
-intersection_of: BFO:0000066 NCBITaxon:6237 ! occurs in Caenorhabditis
-relationship: part_of WBls:0000004 ! proliferating embryo Ce
-property_value: IAO:0000589 "blastula stage (worm)" xsd:string
-
-[Term]
-id: WBls:0000010
-name: gastrulating embryo Ce
-namespace: worm_development
-def: "The C. elegans life stage spanning 100-290min after first cleavage at 20 Centigrade. Proliferate from 28 cells to 421 cells. Referring to the whole period of gastrulation." [WB:wjc]
-subset: life_stage
-synonym: "gastrulating embryo" BROAD []
-is_a: UBERON:0000109 ! gastrula stage
-is_a: WBls:0000002 ! all stages Ce
-is_a: WBls:0000814 ! C. elegans life stage occurring during gastrulation
-intersection_of: UBERON:0000109 ! gastrula stage
-intersection_of: BFO:0000066 NCBITaxon:6237 ! occurs in Caenorhabditis
-relationship: immediately_preceded_by WBls:0000005 ! blastula embryo Ce
-relationship: part_of WBls:0000004 ! proliferating embryo Ce
-property_value: IAO:0000589 "gastrula stage (worm)" xsd:string
-
-[Term]
-id: WBls:0000022
-name: postembryonic Ce
-namespace: worm_development
-def: "A developemental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until death." [WB:WBPerson2987, WB:wjc]
-subset: life_stage
-synonym: "postembryonic" BROAD []
-synonym: "postembryonic Bma" EXACT []
-synonym: "postembryonic stage" BROAD []
-xref: WBls:0000093
-xref: WBls:0000103
-is_a: UBERON:0000092 ! post-embryonic stage
-is_a: WBls:0000002 ! all stages Ce
-is_a: WBls:0000091 ! Brugia life stage
-is_a: WBls:0000804 ! C. elegans life stage occurring post embryogenesis
-intersection_of: UBERON:0000092 ! post-embryonic stage
-intersection_of: BFO:0000066 NCBITaxon:6237 ! occurs in Caenorhabditis
-relationship: immediately_preceded_by WBls:0000092 ! Brugia embryo
-property_value: IAO:0000589 "post-embryonic stage (worm)" xsd:string
-created_by: danielaraciti
-creation_date: 2013-11-12T04:50:29Z
-creation_date: 2013-11-25T06:14:39Z
-
-[Term]
-id: WBls:0000023
-name: larva Ce
-namespace: worm_development
-def: "A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood." [WB:WBPerson2987, WB:wjc]
-subset: life_stage
-synonym: "larva" BROAD []
-is_a: UBERON:0004729 ! nematode larval stage
-is_a: WBls:0000002 ! all stages Ce
-is_a: WBls:0000105 ! nematode larval stage
-is_a: WBls:0000817 ! C. elegans life stage occurring during larval stage
-intersection_of: UBERON:0004729 ! nematode larval stage
-intersection_of: BFO:0000066 NCBITaxon:6237 ! occurs in Caenorhabditis
-relationship: immediately_preceded_by WBls:0000092 ! Brugia embryo
-relationship: part_of WBls:0000022 ! postembryonic Ce
-property_value: IAO:0000589 "nematode larval stage (worm)" xsd:string
-
-[Term]
-id: WBls:0000024
-name: L1 larva Ce
-namespace: worm_development
-def: "The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch." [WB:wjc]
-synonym: "L1 larva" BROAD []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000106 ! L1 larval stage
-is_a: WBls:0000818 ! C. elegans life stage occurring during L1 larval stage
-relationship: immediately_preceded_by WBls:0000092 ! Brugia embryo
-relationship: part_of WBls:0000023 ! larva Ce
-
-[Term]
-id: WBls:0000026
-name: L1-L2 molt Ce
-namespace: worm_development
-def: "The stage when an animal shifts from L1 larva to L2 larva. It includes the synthesis of new cuticle, cease of phrayngeal pumping during a lethargus stage, and the shed off of old cuticle." [WB:wjc]
-synonym: "L1-L2 molt" BROAD []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000824 ! C. elegans life stage occurring during larval molt
-relationship: immediately_preceded_by WBls:0000024 ! L1 larva Ce
-relationship: part_of WBls:0000023 ! larva Ce
-
-[Term]
-id: WBls:0000027
-name: L2 larva Ce
-namespace: worm_development
-def: "The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch." [WB:wjc]
-synonym: "L2 larva" BROAD []
-is_a: WBls:0000107 ! L2 larval stage
-is_a: WBls:0000819 ! C. elegans life stage occurring during L2 larval stage
-relationship: immediately_preceded_by WBls:0000026 ! L1-L2 molt Ce
-relationship: part_of WBls:0000023 ! larva Ce
-relationship: preceded_by WBls:0000024 ! L1 larva Ce
-
-[Term]
-id: WBls:0000029
-name: L2-L3 molt Ce
-namespace: worm_development
-def: "The stage when an animal shifts from L2 larva to L3 larva. It includes the synthesis of new cuticle, cease of phrayngeal pumping during a lethargus stage, and the shed off of old cuticle." [WB:wjc]
-synonym: "L2-L3 molt" BROAD []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000824 ! C. elegans life stage occurring during larval molt
-relationship: immediately_preceded_by WBls:0000027 ! L2 larva Ce
-relationship: part_of WBls:0000023 ! larva Ce
+def: "A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]." [ISBN:0815318960, OMD:neural+plate, Wikipedia:Neural_plate, ZFIN:curator]
+subset: pheno_slim
+subset: uberon_slim
+subset: vertebrate_core
+synonym: "lamina neuralis" RELATED OMO:0003011 [Wikipedia:Neural_plate]
+synonym: "presumptive central nervous system" RELATED []
+xref: AAO:0011072
+xref: BTO:0001765
+xref: DHBA:10153
+xref: DMBA:15565
+xref: EHDAA:346
+xref: EHDAA:902
+xref: EMAPA:35593
+xref: FMA:293879
+xref: MESH:D054258 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0001-9439-5346", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
+xref: NCIT:C34225
+xref: neuronames:1362
+xref: RETIRED_EHDAA2:0001252
+xref: TAO:0000132
+xref: UMLS:C0920623 {source="ncithesaurus:Neural_Plate"}
+xref: VHOG:0000068
+xref: Wikipedia:Neural_plate
+xref: XAO:0000249
+xref: ZFA:0000132
+is_a: UBERON:0005291 ! embryonic tissue
+is_a: UBERON:0010371 ! ecto-epithelium
+is_a: UBERON:0016879 ! future central nervous system
+relationship: developmentally_induced_by UBERON:0002328 {source="Wikipedia"} ! notochord
+relationship: develops_from UBERON:0007284 ! presumptive neural plate
+relationship: immediate_transformation_of UBERON:0007284 {source="Bgee:AN"} ! presumptive neural plate
+relationship: in_taxon NCBITaxon:7711 {source="GOTAX:0000352"} ! Chordata
+property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png" xsd:anyURI
+property_value: external_definition "The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000132", ontology="TAO", source="ZFIN:curator"}
+property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000068", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28", source="http://bgee.unil.ch/"}
[Term]
-id: WBls:0000032
-name: dauer larva Ce
-namespace: worm_development
-def: "A third stage larva specialized for dispersal and long term survival." [ISBN:0-87969-433-5]
-synonym: "dauer larva" BROAD []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000817 ! C. elegans life stage occurring during larval stage
-relationship: part_of WBls:0000023 ! larva Ce
-relationship: preceded_by WBls:0000027 ! L2 larva Ce
+id: UBERON:0003143
+name: pupa
+namespace: uberon
+def: "An organism at the pupal stage. A life cycle stage of holometabolous insects in which the organism is a pupa and starts with the larval-pupal apolysis and ends with pupal-adult apolysis." [https://github.com/obophenotype/uberon/issues/562, Wikipedia:Pupa]
+subset: efo_slim
+synonym: "aurelia" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
+synonym: "chrysalides" NARROW OMO:0003004 [NCBITaxon:37572, Wikipedia:Pupa]
+synonym: "chrysalis" NARROW [NCBITaxon:37572, Wikipedia:Pupa]
+synonym: "pupae" RELATED OMO:0003004 []
+xref: BTO:0001143
+xref: EFO:0002684
+xref: FBbt:00002953 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: HAO:0000886
+xref: MESH:D011679 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", sssom:author_id="https://orcid.org/0000-0001-9439-5346", sssom:mapping_provider="https://github.com/biopragmatics/biomappings"}
+xref: Wikipedia:Pupa
+is_a: UBERON:0000468 ! multicellular organism
+intersection_of: UBERON:0000468 ! multicellular organism
+intersection_of: existence_starts_and_ends_during UBERON:0000070 ! pupal stage
+relationship: existence_starts_and_ends_during UBERON:0000070 ! pupal stage
+relationship: has_quality PATO:0001187 ! pupal
+relationship: in_taxon NCBITaxon:33392 ! Endopterygota
+property_value: dc:contributor https://github.com/ANiknejad
+property_value: dc:contributor https://github.com/cmungall
+property_value: dc:contributor https://github.com/dosumis
+property_value: dc:contributor https://github.com/fbastian
+property_value: dc:contributor https://github.com/mmc46
+property_value: has_relational_adjective "pupal" xsd:string
[Term]
-id: WBls:0000035
-name: L3 larva Ce
-namespace: worm_development
-def: "The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch." [WB:wjc]
-synonym: "L3 larva" BROAD []
-is_a: WBls:0000108 ! L3 larval stage
-is_a: WBls:0000820 ! C. elegans life stage occurring during L3 larval stage
-relationship: immediately_preceded_by WBls:0000029 ! L2-L3 molt Ce
-relationship: part_of WBls:0000023 ! larva Ce
-relationship: preceded_by WBls:0000027 ! L2 larva Ce
+id: UBERON:0003914
+name: epithelial tube
+namespace: http://www.xspan.org/obo.owl#
+namespace: uberon
+def: "Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system." [GO:0060562, PMID:12526790]
+synonym: "epithelial or endothelial tube" EXACT []
+xref: AEO:0000114
+xref: EHDAA2:0003114
+xref: FBbt:00007474 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+is_a: UBERON:0000025 ! tube
+is_a: UBERON:0000483 ! epithelium
+intersection_of: UBERON:0000483 ! epithelium
+intersection_of: has_quality PATO:0002299 ! tubular
+relationship: has_part CL:0000068 ! duct epithelial cell
+property_value: curator_notes "contrast with a multi-tissue tube, which has as parts both epithelium, connective tissue, possibly muscle layers" xsd:string
+property_value: IAO:0000589 "epithelial tube (AEO)" xsd:string
[Term]
-id: WBls:0000037
-name: L3-L4 molt Ce
-namespace: worm_development
-def: "The stage when an animal shifts from L3 larva to L4 larva. It includes the synthesis of new cuticle, cease of phrayngeal pumping during a lethargus stage, and the shed off of old cuticle." [WB:wjc]
-synonym: "L3-L4 molt" BROAD []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000824 ! C. elegans life stage occurring during larval molt
-relationship: immediately_preceded_by WBls:0000035 ! L3 larva Ce
-relationship: part_of WBls:0000023 ! larva Ce
+id: UBERON:0004111
+name: anatomical conduit
+namespace: http://www.xspan.org/obo.owl#
+namespace: uberon
+def: "Any tube, opening or passage that connects two distinct anatomical spaces." [http://orcid.org/0000-0002-6601-2165]
+subset: common_anatomy
+synonym: "foramen" NARROW [EHDAA2:0003080]
+synonym: "foramina" NARROW OMO:0003004 [https://orcid.org/0000-0002-6601-2165]
+synonym: "opening" RELATED []
+synonym: "ostia" RELATED OMO:0003004 []
+synonym: "ostium" RELATED []
+xref: AEO:0000080
+xref: EHDAA2:0003080
+xref: FMA:242873
+xref: SCTID:346902003
+xref: Wikipedia:Foramen
+is_a: CARO:0000010 ! anatomical boundary
+is_a: UBERON:0010000 ! multicellular anatomical structure
+intersection_of: UBERON:0010000 ! multicellular anatomical structure
+intersection_of: conduit_for UBERON:0000061 ! anatomical structure
+intersection_of: has_part UBERON:0013686 ! anatomical conduit space
+relationship: conduit_for UBERON:0000061 ! anatomical structure
+relationship: connects UBERON:0000464 {cardinality="2"} ! anatomical space
+relationship: has_part UBERON:0013686 ! anatomical conduit space
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: external_ontology_notes "FMA has both conduit and conduit space. In EHDAA2 this is a surface feature" xsd:string {external_ontology="FMA"}
+property_value: IAO:0000589 "anatomical conduit (AEO)" xsd:string
[Term]
-id: WBls:0000038
-name: L4 larva Ce
-namespace: worm_development
-def: "The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch." [WB:wjc]
-synonym: "L4 larva" BROAD []
-is_a: WBls:0000109 ! L4 larval stage
-is_a: WBls:0000821 ! C. elegans life stage occurring during L4 larval stage
-relationship: immediately_preceded_by WBls:0000032 ! dauer larva Ce
-relationship: immediately_preceded_by WBls:0000037 ! L3-L4 molt Ce
-relationship: part_of WBls:0000023 ! larva Ce
-relationship: preceded_by WBls:0000035 ! L3 larva Ce
-
-[Term]
-id: WBls:0000040
-name: L4-adult molt Ce
-namespace: worm_development
-def: "The stage when an animal shifts from L4 larva to adult. It includes the synthesis of new cuticle, cease of phrayngeal pumping during a lethargus stage, and the shed off of old cuticle." [WB:wjc]
-synonym: "L4-adult molt" BROAD []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000824 ! C. elegans life stage occurring during larval molt
-relationship: part_of WBls:0000023 ! larva Ce
+id: UBERON:0004120
+name: mesoderm-derived structure
+namespace: uberon
+def: "An anatomical structure that develops (entirely or partially) from the mesoderm." [https://orcid.org/0000-0002-6601-2165]
+subset: grouping_class
+synonym: "mesodermal derivative" EXACT [FBbt:00025998]
+is_a: UBERON:0000061 ! anatomical structure
+intersection_of: UBERON:0000061 ! anatomical structure
+intersection_of: develops_from UBERON:0000926 ! mesoderm
+relationship: develops_from UBERON:0000926 ! mesoderm
+property_value: curator_notes "Grouping term for query purposes" xsd:string
[Term]
-id: WBls:0000041
-name: adult Ce
-namespace: worm_development
-def: "The stage that begins when a C.elegans individual is fully-developed and has reached maturity." [WB:wjc]
-subset: life_stage
-synonym: "adult" BROAD []
-is_a: UBERON:0000066 ! fully formed stage
-is_a: WBls:0000002 ! all stages Ce
-is_a: WBls:0000104 ! nematode adult
-is_a: WBls:0000816 ! C. elegans life stage occurring during adulthood
-intersection_of: UBERON:0000066 ! fully formed stage
-intersection_of: BFO:0000066 NCBITaxon:6237 ! occurs in Caenorhabditis
-relationship: immediately_preceded_by WBls:0000023 ! larva Ce
-relationship: immediately_preceded_by WBls:0000040 ! L4-adult molt Ce
-relationship: part_of WBls:0000022 ! postembryonic Ce
-relationship: preceded_by WBls:0000038 ! L4 larva Ce
-property_value: IAO:0000589 "fully formed stage (worm)" xsd:string
+id: UBERON:0004121
+name: ectoderm-derived structure
+namespace: uberon
+def: "An anatomical structure that develops (entirely or partially) from the ectoderm." [https://orcid.org/0000-0002-6601-2165]
+subset: grouping_class
+synonym: "ectodermal deriviative" EXACT [FBbt:00025990]
+is_a: UBERON:0000061 ! anatomical structure
+intersection_of: UBERON:0000061 ! anatomical structure
+intersection_of: develops_from UBERON:0000924 ! ectoderm
+relationship: develops_from UBERON:0000924 ! ectoderm
+property_value: curator_notes "Grouping term for query purposes" xsd:string
[Term]
-id: WBls:0000056
-name: adult male Ce
-namespace: worm_development
-def: "The stage after an male animal is fully-developed and reaches maturity." [WB:wjc]
-subset: life_stage
-synonym: "adult male" BROAD []
-is_a: WBls:0000041 ! adult Ce
+id: UBERON:0004288
+name: skeleton
+namespace: http://www.xspan.org/obo.owl#
+namespace: uberon
+def: "Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body." [VSAO:0000026]
+subset: efo_slim
+subset: human_reference_atlas
+subset: pheno_slim
+subset: uberon_slim
+synonym: "set of all bones" EXACT []
+synonym: "set of bones of body" EXACT []
+xref: AEO:0000168
+xref: EHDAA2:0001843
+xref: EHDAA:5047
+xref: EMAPA:17213
+xref: FMA:23875
+xref: GAID:177
+xref: galen:Skeleton
+xref: MA:0003006
+xref: MAT:0000032
+xref: MESH:D012863
+xref: MIAA:0000032
+xref: SCTID:361378004
+xref: VSAO:0000026
+xref: Wikipedia:Skeleton
+xref: XAO:0004053
+is_a: UBERON:0034925 ! anatomical collection
+relationship: has_member UBERON:0004765 ! skeletal element
+relationship: mutually_spatially_disjoint_with UBERON:0000383 ! musculature of body
+relationship: part_of UBERON:0001434 ! skeletal system
+relationship: present_in_taxon NCBITaxon:9606
+property_value: external_definition "Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000026", ontology="VSAO", source="GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070"}
+property_value: has_relational_adjective "skeletal" xsd:string
+property_value: IAO:0000589 "skeleton (AEO)" xsd:string
+property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/The-skeletal-system" xsd:anyURI
[Term]
-id: WBls:0000057
-name: adult hermaphrodite Ce
-namespace: worm_development
-def: "The stage after an hermaphrodite animal is fully-developed and reaches maturity." [WB:wjc]
+id: UBERON:0004707
+name: pharyngula stage
+namespace: uberon
+def: "A stage that follows the blastula, gastrula and neurula stages. At the pharyngula stage, all vertebrate embryos show remarkable similarities." [Wikipedia:Pharyngula]
+subset: efo_slim
subset: life_stage
-synonym: "adult hermaphrodite" BROAD []
-is_a: WBls:0000041 ! adult Ce
-
-[Term]
-id: WBls:0000059
-name: parasitic nematode stage
-namespace: worm_development
-def: "The nematode life-cycle stage that occurs entirely or partially within a host or vector organism." [WB:jl]
-is_a: WBls:0000101 ! Nematode life stage
-created_by: jl16
-creation_date: 2015-03-19T10:44:40Z
-
-[Term]
-id: WBls:0000075
-name: worm life stage
-namespace: worm_development
-def: "A developemental life stage of a worm" [WB:WBPerson2987]
-created_by: danielaraciti
+synonym: "pharyngula" RELATED []
+synonym: "phylotypic stage" EXACT []
+xref: DrerDO:0000052
+xref: EFO:0001310
+xref: OGES:000006
+xref: Wikipedia:Pharyngula
+xref: ZFS:0000050
+is_a: UBERON:0000105 ! life cycle stage
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0000111 ! organogenesis stage
+relationship: preceded_by UBERON:0000110 ! neurula stage
+property_value: taxon_notes "Corresponds to E7-E11 in Mouse (Galis et al, TREE, 2001)" xsd:string
[Term]
-id: WBls:0000091
-name: Brugia life stage
-namespace: worm_development
-def: "Any Brugia developmental stage, including embryo, larva and adult stage." [WB:dr, WB:jl, WB:mb]
-synonym: "all stages Bma" BROAD []
-is_a: WBls:0000059 ! parasitic nematode stage
-created_by: danielaraciti
-creation_date: 2013-11-12T03:18:57Z
+id: UBERON:0004716
+name: conceptus
+namespace: http://www.xspan.org/obo.owl#
+namespace: uberon
+def: "The embryo and its adnexa (appendages or adjunct parts) or associated membranes (i.e. the products of conception) The conceptus includes all structures that develop from the zygote, both embryonic and extraembryonic. It includes the embryo as well as the embryonic part of the placenta and its associated membranes - amnion, chorion (gestational sac), and yolk sac[WP]." [BTO:0003834, Wikipedia:Conceptus]
+synonym: "embryo plus adnexa" EXACT []
+xref: AEO:0000194
+xref: BTO:0003834
+xref: EHDAA2:0000001
+xref: EHDAA2:0003235
+xref: EMAPA:36040
+xref: NCIT:C34131
+xref: UMLS:C1516779 {source="ncithesaurus:Conceptus"}
+xref: Wikipedia:Conceptus
+is_a: UBERON:0000061 ! anatomical structure
+relationship: develops_from CL:0000365 ! animal zygote
+relationship: existence_ends_with UBERON:0000068 ! embryo stage
+relationship: existence_starts_with UBERON:0000068 ! embryo stage
+relationship: has_part UBERON:0002050 ! embryonic structure
+relationship: has_part UBERON:0016887 ! entire extraembryonic component
+property_value: editor_note "EHDAA2 places this as a subtype of organism. This leads to the inference that a conceptus is an embryo (if an embryo is defined as an organism at embryo stage), which eliminates the embryonic + extra-embryonic = conceptus" xsd:string
+property_value: IAO:0000589 "conceptus (AEO)" xsd:string
[Term]
-id: WBls:0000092
-name: Brugia embryo
-namespace: worm_development
-def: "The whole period of embryogenesis in a roundworm of the genus Brugia, from the formation of an egg until hatching." [WB:dr, WB:WBPerson2987]
+id: UBERON:0004728
+name: amphibian larval stage
+namespace: uberon
+def: "Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they metamorphose into the adult form." [GO:0002117]
subset: life_stage
-synonym: "embryo" BROAD []
-synonym: "embryo Bma" EXACT []
-synonym: "embryo nematode" EXACT []
-synonym: "nematode egg stage" EXACT []
-xref: WBls:0000003
-xref: WBls:0000102
-is_a: UBERON:0000068 ! embryo stage
-is_a: WBls:0000002 ! all stages Ce
-is_a: WBls:0000091 ! Brugia life stage
-is_a: WBls:0000803 ! C. elegans life stage occurring during embryogenesis
-intersection_of: UBERON:0000068 ! embryo stage
-intersection_of: BFO:0000066 NCBITaxon:6237 ! occurs in Caenorhabditis
-property_value: IAO:0000589 "embryo stage (worm)" xsd:string
-created_by: danielaraciti
-creation_date: 2013-11-12T04:48:28Z
-creation_date: 2013-11-25T06:14:14Z
-
-[Term]
-id: WBls:0000101
-name: Nematode life stage
-namespace: worm_development
-def: "Any developmental stage in a nematode, including embryo, larva and adult stage." [WB:dr, WB:jl]
-synonym: "all stages nematode" EXACT []
-synonym: "nematode developmental stage" EXACT []
-is_a: WBls:0000075 ! worm life stage
-created_by: danielaraciti
-creation_date: 2013-11-25T06:13:37Z
-
-[Term]
-id: WBls:0000104
-name: nematode adult
-namespace: worm_development
-def: "The nematode life-stage that begins when the organism is fully-developed and has reached maturity." [WB:dr]
-synonym: "adult nematode" EXACT []
-synonym: "L5" EXACT []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000101 ! Nematode life stage
-relationship: immediately_preceded_by WBls:0000105 ! nematode larval stage
-created_by: danielaraciti
-creation_date: 2013-11-25T06:18:53Z
+synonym: "larva" RELATED [XAO:1000008]
+synonym: "larva stage" BROAD []
+synonym: "polliwog" NARROW SENSU [Wikipedia:Larva]
+synonym: "polliwog stage" NARROW SENSU [Wikipedia:Larva]
+synonym: "tadpole" NARROW SENSU [Wikipedia:Larva]
+synonym: "tadpole stage" NARROW SENSU [Wikipedia:Larva]
+xref: XtroDO:0000056
+is_a: UBERON:0000069 ! larval stage
+relationship: in_taxon NCBITaxon:8292 ! Amphibia
+relationship: present_in_taxon NCBITaxon:8355
+relationship: simultaneous_with GO:0002117 ! amphibian larval development
+property_value: external_ontology_notes "the XAO class denotes a stage" xsd:string {external_ontology="XAO"}
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/534" xsd:anyURI
[Term]
-id: WBls:0000105
+id: UBERON:0004729
name: nematode larval stage
-namespace: worm_development
-def: "The stage that begins after hatching and ends when the nematode becomes adult." [WB:dr]
-synonym: "larva nematode" EXACT []
-synonym: "larval stage" BROAD []
-synonym: "nematode larva" EXACT []
-is_a: WBls:0000101 ! Nematode life stage
-created_by: danielaraciti
-creation_date: 2013-11-25T06:19:27Z
-
-[Term]
-id: WBls:0000106
-name: L1 larval stage
-namespace: worm_development
-def: "The first stage larva of nematodes." [WB:dr]
-synonym: "L1 larva nematode" EXACT []
-is_a: WBls:0000105 ! nematode larval stage
-created_by: danielaraciti
-creation_date: 2013-11-25T06:20:28Z
+namespace: uberon
+def: "Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew." [GO:0002119]
+subset: life_stage
+xref: WBls:0000023
+is_a: UBERON:0000069 ! larval stage
+relationship: in_taxon NCBITaxon:6231 ! Nematoda
+relationship: simultaneous_with GO:0002119 ! nematode larval development
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/567" xsd:anyURI
[Term]
-id: WBls:0000107
-name: L2 larval stage
-namespace: worm_development
-def: "The second stage larva of nematodes." [WB:dr]
-synonym: "L2 larva nematode" EXACT []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000105 ! nematode larval stage
-relationship: immediately_preceded_by WBls:0000106 ! L1 larval stage
-created_by: danielaraciti
-creation_date: 2013-11-25T06:20:54Z
+id: UBERON:0004730
+name: instar larval stage
+namespace: uberon
+def: "This begins with the newly hatched first-instar larva, through its maturation to the end of the last larval stage. An example of this process is found in Drosophila melanogaster." [GO:0002168]
+subset: life_stage
+xref: FBdv:00005336
+is_a: UBERON:0000069 ! larval stage
+relationship: in_taxon NCBITaxon:50557 ! Insecta
+relationship: present_in_taxon NCBITaxon:7227
+relationship: simultaneous_with GO:0002168 ! instar larval development
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/526" xsd:anyURI
[Term]
-id: WBls:0000108
-name: L3 larval stage
-namespace: worm_development
-def: "The third stage larva of nematodes." [WB:dr]
-synonym: "L3 larva nematode" EXACT []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000105 ! nematode larval stage
-relationship: immediately_preceded_by WBls:0000107 ! L2 larval stage
-created_by: danielaraciti
-creation_date: 2013-11-25T06:21:33Z
+id: UBERON:0004734
+name: gastrula
+namespace: uberon
+alt_id: UBERON:0007012
+def: "Organism at the gastrula stage." [Wikipedia:Gastrula, Wikipedia:Trilaminar_blastocyst]
+subset: pheno_slim
+synonym: "blastocystis trilaminaris" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "gastrula embryo" EXACT [BILA:0000060]
+synonym: "tri-laminar disc" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "tri-laminar disk" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar blastocyst" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar blastoderm" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar disc" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar disk" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "trilaminar germ" RELATED [https://orcid.org/0000-0002-6601-2165]
+xref: BILA:0000060
+xref: BTO:0001403
+xref: FBbt:00005317 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:293108
+xref: GAID:1302
+xref: MESH:D005775
+xref: MIAA:0000179
+xref: NCIT:C34057
+xref: NCIT:C34058
+xref: UMLS:C0017199 {source="ncithesaurus:Gastrula"}
+xref: UMLS:C1284022 {source="ncithesaurus:Trilaminar_Embryonic_Disc"}
+xref: Wikipedia:Gastrula
+xref: Wikipedia:Trilaminar_blastocyst
+is_a: UBERON:0000922 ! embryo
+intersection_of: UBERON:0000468 ! multicellular organism
+intersection_of: existence_starts_and_ends_during UBERON:0000109 ! gastrula stage
+relationship: develops_from UBERON:0000307 ! blastula
+relationship: existence_starts_and_ends_during UBERON:0000109 ! gastrula stage
+property_value: external_ontology_notes "We explicitly merge the NCITA terms here" xsd:string {external_ontology="NCIT"}
[Term]
-id: WBls:0000109
-name: L4 larval stage
-namespace: worm_development
-def: "The fourth stage larva of nematodes." [WB:dr]
-synonym: "L4 larva nematode" EXACT []
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000105 ! nematode larval stage
-relationship: immediately_preceded_by WBls:0000108 ! L3 larval stage
-created_by: danielaraciti
-creation_date: 2013-11-25T06:22:48Z
+id: UBERON:0004765
+name: skeletal element
+namespace: uberon
+def: "Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles." [https://orcid.org/0000-0002-6601-2165]
+subset: organ_slim
+subset: uberon_slim
+xref: AAO:0011129
+xref: galen:SkeletalStructure
+xref: TAO:0001890
+xref: VSAO:0000128
+xref: XAO:0004012
+xref: ZFA:0005494
+is_a: UBERON:0000062 ! organ
+relationship: part_of UBERON:0001434 {source="VSAO"} ! skeletal system
+property_value: external_definition "Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000128", ontology="VSAO", source="PSPUB:0000170"}
+property_value: external_definition "Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001890", ontology="TAO", source="TAO:VSAO_workshop"}
[Term]
-id: WBls:0000803
-name: C. elegans life stage occurring during embryogenesis
-namespace: worm_development
-def: "A C. elegans life stage that occurs during embryogenesis" [WB:WBPerson2987]
-is_a: WBls:0000825 ! C. elegans life stage
+id: UBERON:0004770
+name: articular system
+namespace: uberon
+def: "Anatomical system that consists of all the joints of the body." [VSAO:0000181]
+synonym: "joint system" EXACT [FMA:23878]
+synonym: "set of all joints" RELATED []
+synonym: "set of all joints of body" EXACT [FMA:23878]
+synonym: "set of joints of body" RELATED [FMA:23878]
+xref: EMAPA:35150
+xref: FMA:23878
+xref: MA:0003007
+xref: SCTID:361827000
+xref: VSAO:0000181
+is_a: UBERON:0034925 ! anatomical collection
+intersection_of: UBERON:0034925 ! anatomical collection
+intersection_of: has_member UBERON:0000982 ! skeletal joint
+relationship: existence_ends_during UBERON:0000066 ! fully formed stage
+relationship: functionally_related_to GO:0040011 ! locomotion
+relationship: has_member UBERON:0000982 ! skeletal joint
+relationship: in_taxon NCBITaxon:33213 ! Bilateria
+relationship: part_of UBERON:0001434 {source="FMA"} ! skeletal system
[Term]
-id: WBls:0000804
-name: C. elegans life stage occurring post embryogenesis
-namespace: worm_development
-def: "A C. elegans life stage that occurs after embryogenesis" [WB:WBPerson2987]
-is_a: WBls:0000825 ! C. elegans life stage
+id: UBERON:0004880
+name: chordamesoderm
+namespace: uberon
+def: "The central region of trunk mesoderm. This tissue forms the notochord." [https://orcid.org/0000-0002-6601-2165]
+subset: efo_slim
+subset: pheno_slim
+synonym: "axial chorda mesoderm" EXACT [ZFA:0000091]
+synonym: "chorda mesoderm" EXACT []
+synonym: "dorsal mesoderm" EXACT [https://github.com/obophenotype/uberon/wiki/The-neural-crest]
+synonym: "presumptive notochord" EXACT [ZFA:0000091]
+xref: AAO:0000478
+xref: EFO:0003426
+xref: TAO:0000091
+xref: ZFA:0000091
+is_a: UBERON:0002050 ! embryonic structure
+relationship: in_taxon NCBITaxon:7711 ! Chordata
+relationship: part_of UBERON:0003068 ! axial mesoderm
+property_value: external_definition "Notochord rudiment[ZFIN:ZDB-PUB-961014-576]." xsd:string {source="ZFIN:ZDB-PUB-961014-576"}
+property_value: external_ontology_notes "WP treats this as synonym of axial mesoderm. Induces neural tube. Gilbert: contains an anterior head process and the notochord." xsd:string
[Term]
-id: WBls:0000812
-name: C. elegans life stage occurring during proliferating embryo
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the proliferating embryo life stage" [WB:WBPerson2987]
-is_a: WBls:0000803 ! C. elegans life stage occurring during embryogenesis
+id: UBERON:0004905
+name: articulation
+namespace: uberon
+def: "Anatomical structure that connects two or more adjacent skeletal elements or hardened body parts." [http://orcid.org/0000-0002-6601-2165]
+subset: grouping_class
+synonym: "joint" NARROW []
+xref: FBbt:00005811 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+is_a: UBERON:0034921 ! multi organ part structure
+relationship: part_of UBERON:0004770 ! articular system
[Term]
-id: WBls:0000813
-name: C. elegans life stage occurring during blastula embryo
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the blastula embryo life stage" [WB:WBPerson2987]
-is_a: WBls:0000812 ! C. elegans life stage occurring during proliferating embryo
+id: UBERON:0004921
+name: subdivision of digestive tract
+namespace: uberon
+def: "A proximal-distal subdivision of the digestive tract." [http://orcid.org/0000-0002-6601-2165]
+subset: human_reference_atlas
+subset: non_informative
+synonym: "alimentary system subdivision" RELATED [FMA:71131]
+synonym: "gut section" RELATED [FBbt:00100315]
+synonym: "intestinal tract" RELATED []
+synonym: "segment of intestinal tract" RELATED []
+synonym: "subdivision of alimentary system" RELATED [FMA:71131]
+xref: FBbt:00100315 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:71131
+is_a: UBERON:0013522 ! subdivision of tube
+intersection_of: UBERON:0013522 ! subdivision of tube
+intersection_of: subdivision_of UBERON:0001555 ! digestive tract
+relationship: part_of UBERON:0001555 ! digestive tract
+relationship: present_in_taxon NCBITaxon:9606
+relationship: subdivision_of UBERON:0001555 ! digestive tract
+property_value: curator_notes "intended to denote both embryonic and adult structures. Note the FMA grouping here is not quite correct." xsd:string
[Term]
-id: WBls:0000814
-name: C. elegans life stage occurring during gastrulation
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the gastrulating embryo life stage" [WB:WBPerson2987]
-is_a: WBls:0000812 ! C. elegans life stage occurring during proliferating embryo
+id: UBERON:0004923
+name: organ component layer
+namespace: uberon
+def: "A part of a wall of an organ that forms a layer." [http://orcid.org/0000-0002-6601-2165]
+subset: upper_level
+xref: FMA:82485
+is_a: UBERON:0000064 ! organ part
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0000060 ! anatomical wall
[Term]
-id: WBls:0000816
-name: C. elegans life stage occurring during adulthood
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the adult life stage" [WB:WBPerson2987]
-is_a: WBls:0000804 ! C. elegans life stage occurring post embryogenesis
+id: UBERON:0005068
+name: neural rod
+namespace: uberon
+def: "A solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts[GO]. An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube[ZFIN]." [GO:0014024, ZFA:0000133]
+subset: efo_slim
+synonym: "neural tube rod" RELATED [GO:0014027]
+xref: EFO:0003498
+xref: TAO:0000133
+xref: ZFA:0000133
+is_a: UBERON:0016879 ! future central nervous system
+relationship: develops_from UBERON:0007135 ! neural keel
+property_value: external_definition "An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000133", ontology="TAO", source="ZFIN:curator"}
[Term]
-id: WBls:0000817
-name: C. elegans life stage occurring during larval stage
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the larval life stage" [WB:WBPerson2987]
-is_a: WBls:0000804 ! C. elegans life stage occurring post embryogenesis
+id: UBERON:0005090
+name: muscle structure
+namespace: uberon
+def: "Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO]." [GO:0061061]
+synonym: "muscle" RELATED []
+synonym: "muscle element" RELATED []
+synonym: "musculus" EXACT [FMA:30316]
+xref: FMA:30316
+is_a: UBERON:0000061 ! anatomical structure
+relationship: has_part CL:0000187 ! muscle cell
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+property_value: curator_notes "in some organisms such as drosophila, muscles can be single cells. This class groups together all discrete muscle elements, from multicellular muscle organs in vertebrates, to individual single-cell muscles in drisophila" xsd:string
[Term]
-id: WBls:0000818
-name: C. elegans life stage occurring during L1 larval stage
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the L1 larval life stage" [WB:WBPerson2987]
-is_a: WBls:0000817 ! C. elegans life stage occurring during larval stage
+id: UBERON:0005291
+name: embryonic tissue
+namespace: uberon
+def: "A portion of tissue that is part of an embryo." [OBOL:automatic]
+subset: pheno_slim
+subset: upper_level
+synonym: "developing tissue" RELATED []
+synonym: "portion of embryonic tissue" EXACT [OBOL:automatic]
+xref: CALOHA:TS-2100
+is_a: UBERON:0000479 ! tissue
+intersection_of: UBERON:0000479 ! tissue
+intersection_of: part_of UBERON:0000922 ! embryo
+relationship: part_of UBERON:0002050 ! embryonic structure
[Term]
-id: WBls:0000819
-name: C. elegans life stage occurring during L2 larval stage
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the L2 larval life stage" [WB:WBPerson2987]
-is_a: WBls:0000817 ! C. elegans life stage occurring during larval stage
+id: UBERON:0005423
+name: developing anatomical structure
+namespace: http://www.xspan.org/obo.owl#
+namespace: uberon
+alt_id: UBERON:0005423
+def: "A structure whose morphology or state of differentiation will change during normal development." [AEO:JB]
+subset: common_anatomy
+synonym: "developing structure" RELATED []
+synonym: "developmental structure" RELATED []
+synonym: "developmental tissue" RELATED [MIAA:0000019]
+xref: AEO:0000125
+xref: CALOHA:TS-2122
+xref: EHDAA2:0003125
+xref: FBbt:00007006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:292313
+xref: MIAA:0000019
+is_a: CARO:0000003 ! anatomical structure
+is_a: UBERON:0000465 ! material anatomical entity
+relationship: capable_of GO:0032502 ! developmental process
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: IAO:0000589 "developing anatomical structure (AEO)" xsd:string
[Term]
-id: WBls:0000820
-name: C. elegans life stage occurring during L3 larval stage
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the L3 larval life stage" [WB:WBPerson2987]
-is_a: WBls:0000817 ! C. elegans life stage occurring during larval stage
+id: UBERON:0005764
+name: acellular membrane
+namespace: uberon
+def: "An acellular anatomical structure that is the bounding layer of a anatomical structure." [OBOL:automatic]
+subset: common_anatomy
+xref: FMA:63871
+is_a: UBERON:0000476 ! acellular anatomical structure
+intersection_of: UBERON:0000476 ! acellular anatomical structure
+intersection_of: bounding_layer_of UBERON:0000061 ! anatomical structure
+relationship: bounding_layer_of UBERON:0000061 ! anatomical structure
+relationship: part_of UBERON:0000061 ! anatomical structure
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
[Term]
-id: WBls:0000821
-name: C. elegans life stage occurring during L4 larval stage
-namespace: worm_development
-def: "A C. elegans life stage that occurs during the L4 larval life stage" [WB:WBPerson2987]
-is_a: WBls:0000817 ! C. elegans life stage occurring during larval stage
+id: UBERON:0005769
+name: basement membrane of epithelium
+namespace: uberon
+def: "An acellular membrane that is part of the epithelium, lies adjacent to the epithelial cells, and is the fusion of the the basal lamina and the reticular lamina." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Basement_membrane]
+synonym: "basement membrane" RELATED [FMA:63872]
+synonym: "basement membrane of connective tissue" EXACT [FMA:63872]
+synonym: "membrana basalis" EXACT OMO:0003011 [Wikipedia:Basement_membrane]
+xref: AAO:0010596
+xref: FMA:63872
+xref: GAID:915
+xref: NCIT:C13191
+xref: SCTID:68989006
+xref: UMLS:C0004799 {source="ncithesaurus:Basement_Membrane"}
+xref: Wikipedia:Basement_membrane
+is_a: UBERON:0005764 {source="FMA"} ! acellular membrane
+relationship: adjacent_to CL:0000066 ! epithelial cell
+relationship: composed_primarily_of GO:0005604 ! basement membrane
+relationship: has_part GO:0005587 ! collagen type IV trimer
+relationship: in_taxon NCBITaxon:33208 ! Metazoa
+relationship: part_of UBERON:0000483 ! epithelium
+relationship: present_in_taxon NCBITaxon:80999 {source="http://palaeos.com/metazoa/porifera/homoscleromorpha.html"}
+property_value: curator_notes "this class represents a continuous sheet of basement membrane which can underlie multiple epithelial cells over large regions. In contrast, the GO class 'basal membrane' represents a portion of substance on the scale of a single cell." xsd:string
[Term]
-id: WBls:0000824
-name: C. elegans life stage occurring during larval molt
-namespace: worm_development
-def: "C. elegans life stage that occurs during a larval molt" [WB:WBPerson2987]
-is_a: WBls:0000817 ! C. elegans life stage occurring during larval stage
+id: UBERON:0006267
+name: notochordal plate
+namespace: uberon
+def: "The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord." [VHOG:0001212]
+subset: emapa_ehdaa2
+xref: EHDAA2:0001278
+xref: EHDAA:264
+xref: EMAPA:16101
+xref: NCIT:C34231
+xref: UMLS:C1518429 {source="ncithesaurus:Notochordal_Plate"}
+xref: VHOG:0001212
+is_a: UBERON:0000490 {source="EHDAA2"} ! unilaminar epithelium
+is_a: UBERON:0002050 ! embryonic structure
+is_a: UBERON:0005291 ! embryonic tissue
+is_a: UBERON:0010371 ! ecto-epithelium
+relationship: develops_from UBERON:0006268 {source="EHDAA2"} ! notochordal process
+property_value: editor_note "TODO - check ordering; awaiting confirmation from JB" xsd:string
+property_value: external_definition "The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001212", ontology="VHOG", source="http://bgee.unil.ch/"}
[Term]
-id: WBls:0000825
-name: C. elegans life stage
-namespace: worm_development
-def: "A life stage of the nematode Caenorhabditis elegans" [WB:WBPerson2987]
-is_a: WBls:0000001 ! free-living nematode stage
+id: UBERON:0006268
+name: notochordal process
+namespace: uberon
+def: "A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot." [http://www.med.umich.edu/lrc/coursepages/m1/embryology/embryo/05embryonicperiod.htm]
+comment: The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus.
+subset: emapa_ehdaa2
+synonym: "chordamesoderm" RELATED []
+synonym: "presumptive notochord" RELATED []
+xref: EHDAA2:0001279
+xref: EHDAA:224
+xref: EMAPA:16102
+xref: FMA:293135
+xref: NCIT:C34232
+xref: UMLS:C1518430 {source="ncithesaurus:Notochordal_Process"}
+xref: VHOG:0001213
+is_a: UBERON:0005423 ! developing anatomical structure
+relationship: develops_from UBERON:0000924 {source="EHDAA2"} ! ectoderm
+relationship: in_taxon NCBITaxon:7711 ! Chordata
[Term]
-id: WBls:0000827
-name: post dauer stage Ce
-namespace: worm_development
-def: "A C. elegans life stage that occurs after the animal has recovered from the dauer diapause. This includes the post dauer L3 (PDL3) stage, the post dauer L4 (PDL4) stage, and post dauer adult stage." [PMID:27417559, WB:WBPerson2987]
-is_a: BFO:0000003 ! occurrent
-is_a: WBls:0000804 ! C. elegans life stage occurring post embryogenesis
-relationship: part_of WBls:0000022 ! postembryonic Ce
+id: UBERON:0006595
+name: presumptive endoderm
+namespace: uberon
+def: "Presumptive structure of the blastula that will develop into endoderm." [http://orcid.org/0000-0002-6601-2165]
+subset: efo_slim
+xref: AAO:0000471
+xref: EFO:0003437
+xref: TAO:0000416
+xref: ZFA:0000416
+is_a: UBERON:0006598 ! presumptive structure
+intersection_of: UBERON:0006598 ! presumptive structure
+intersection_of: has_potential_to_develop_into UBERON:0000925 ! endoderm
+intersection_of: part_of UBERON:0000307 ! blastula
+relationship: has_potential_to_develop_into UBERON:0000925 ! endoderm
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0000307 ! blastula
[Term]
-id: WBls:0000829
-name: post dauer adult stage Ce
-namespace: worm_development
-def: "A C. elegans adult life stage that occurs after the animal has recovered from the dauer diapause." [PMID:27417559, WB:WBPerson2987]
-subset: life_stage
-is_a: WBls:0000041 ! adult Ce
-is_a: WBls:0000827 ! post dauer stage Ce
+id: UBERON:0006598
+name: presumptive structure
+namespace: uberon
+def: "Portion of embryonic tissue determined by fate mapping to become a structure." [GOC:CVS, GOC:YMB, ZFA:0001116]
+synonym: "future structure" EXACT []
+synonym: "presumptive structures" EXACT [ZFA:0001116]
+xref: AAO:0000479
+xref: TAO:0001116
+xref: ZFA:0001116
+is_a: UBERON:0002050 ! embryonic structure
+intersection_of: UBERON:0005423 ! developing anatomical structure
+intersection_of: has_potential_to_develop_into UBERON:0000061 ! anatomical structure
+intersection_of: part_of UBERON:0000922 ! embryo
+relationship: has_potential_to_develop_into UBERON:0000061 ! anatomical structure
+property_value: editor_note "Consider merging with anlage" xsd:string
[Term]
-id: XAO:0000437
-name: death
-namespace: xenopus_developmental_stage
-def: "Xenopus developmental stage that corresponds to the end of the animal's life." [https://orcid.org/0000-0002-9611-1279]
-subset: life_stage
-xref: UBERON:0000071
-is_a: UBERON:0000071 ! death stage
-is_a: XAO:1000000 ! Xenopus developmental stage
-intersection_of: UBERON:0000071 ! death stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000095 ! post-embryonic stage
-property_value: IAO:0000589 "death stage (xenopus)" xsd:string
+id: UBERON:0006601
+name: presumptive ectoderm
+namespace: uberon
+def: "Presumptive structure of the blastula that will develop into ectoderm." [http://orcid.org/0000-0002-6601-2165]
+subset: efo_slim
+synonym: "presumptive epidermis" RELATED [ZFA:0001376]
+xref: AAO:0000470
+xref: EFO:0003466
+xref: TAO:0001376
+xref: XAO:0004132
+xref: ZFA:0001376
+is_a: UBERON:0006598 ! presumptive structure
+intersection_of: UBERON:0006598 ! presumptive structure
+intersection_of: has_potential_to_develop_into UBERON:0000924 ! ectoderm
+intersection_of: part_of UBERON:0000307 ! blastula
+relationship: has_potential_to_develop_into UBERON:0000924 ! ectoderm
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0000307 ! blastula
[Term]
-id: XAO:1000000
-name: Xenopus developmental stage
-namespace: xenopus_developmental_stage
-def: "A temporal interval that defines Xenopus life from unfertilized egg to adult and death stages." [https://orcid.org/0000-0002-9611-1279]
-subset: life_stage
-is_a: UBERON:0000105 ! life cycle stage
-intersection_of: UBERON:0000105 ! life cycle stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-property_value: IAO:0000589 "life cycle stage (xenopus)" xsd:string
+id: UBERON:0006603
+name: presumptive mesoderm
+namespace: uberon
+def: "Presumptive structure of the blastula that will develop into mesoderm." [http://orcid.org/0000-0002-6601-2165]
+subset: efo_slim
+xref: AAO:0000476
+xref: EFO:0003467
+xref: TAO:0001377
+xref: ZFA:0001377
+is_a: UBERON:0006598 ! presumptive structure
+intersection_of: UBERON:0006598 ! presumptive structure
+intersection_of: has_potential_to_develop_into UBERON:0000926 ! mesoderm
+intersection_of: part_of UBERON:0000307 ! blastula
+relationship: has_potential_to_develop_into UBERON:0000926 ! mesoderm
+relationship: in_taxon NCBITaxon:6072 ! Eumetazoa
+relationship: part_of UBERON:0000307 ! blastula
[Term]
-id: XAO:1000001
-name: NF stage 1
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 1, corresponding to an embryo of age 0 hr and having the following external morphological criteria: One cell stage, shortly after fertilization. Pigmentation darker ventrally than dorsally. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
-subset: life_stage
-synonym: "zygote" RELATED []
-xref: UBERON:0000106
-is_a: UBERON:0000106 ! zygote stage
-is_a: XAO:1000094 ! NF stage
-intersection_of: UBERON:0000106 ! zygote stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: part_of XAO:1000012 ! embryonic stage
-property_value: IAO:0000589 "zygote stage (xenopus)" xsd:string
+id: UBERON:0006984
+name: anatomical surface
+namespace: uberon
+def: "A two dimensional anatomical structure that is the boundary between an anatomical structure and an anatomical substance, an anatomical space or the organism's environment. Examples include the surface of your skin, the surface of the lining of your gut; the surface of the endothelium of you aorta that is in contact with blood.n." [CARO:0001002]
+comment: Old definition: 'Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures.' Note, in the new definition, the space referred to is not necessarily an anatomical space. It may be the outside of an organism.
+subset: upper_level
+xref: BILA:0000010
+xref: CARO:0001002
+xref: EHDAA2_RETIRED:0003192
+xref: FMA:24137
+xref: NCIT:C34022
+xref: UMLS:C1515977 {source="ncithesaurus:Anatomic_Surface"}
+is_a: UBERON:0010199 {notes="via morphological boundary in CARO"} ! bona-fide anatomical boundary
[Term]
-id: XAO:1000002
-name: early tailbud stage
-namespace: xenopus_developmental_stage
-def: "Tailbud stage that refers to the earlier events associated with this stage, comprising Nieuwkoop and Faber stages 22 to 28." [Bgee:curator, ISBN:0815318960]
-subset: life_stage
-synonym: "early tailbud" EXACT []
-is_a: XAO:1000007 ! tailbud stage
+id: UBERON:0007010
+name: cleaving embryo
+namespace: uberon
+def: "Organism at the cleavage stage." [OBOL:automatic]
+xref: BILA:0000058
+is_a: UBERON:0000922 ! embryo
+intersection_of: UBERON:0000468 ! multicellular organism
+intersection_of: existence_ends_with UBERON:0000107 ! cleavage stage
+intersection_of: existence_starts_with UBERON:0000107 ! cleavage stage
+relationship: existence_ends_with UBERON:0000107 ! cleavage stage
+relationship: existence_starts_with UBERON:0000107 ! cleavage stage
[Term]
-id: XAO:1000003
-name: blastula stage
-namespace: xenopus_developmental_stage
-def: "Embryonic stage during which the solid morula acquires an internal cavity, comprising Nieuwkoop and Faber stages 7 to 9." [ISBN:0471209627, ISBN:0815318960]
-subset: life_stage
-synonym: "blastula" EXACT []
-xref: UBERON:0000108
-is_a: UBERON:0000108 ! blastula stage
-is_a: XAO:1000012 ! embryonic stage
-intersection_of: UBERON:0000108 ! blastula stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000004 ! cleavage stage
-property_value: IAO:0000589 "blastula stage (xenopus)" xsd:string
+id: UBERON:0007026
+name: presumptive gut
+namespace: uberon
+synonym: "embryonic digestive tube" RELATED []
+synonym: "future digestive tract" EXACT []
+synonym: "future digestive tube" EXACT []
+synonym: "future gut" EXACT []
+synonym: "primitive gut" EXACT []
+synonym: "primordial digestive tube" RELATED []
+synonym: "primordial gut" RELATED []
+xref: BILA:0000084
+xref: NCIT:C34268
+xref: SCTID:360394002
+xref: UMLS:C1514442 {source="ncithesaurus:Primordial_Gut"}
+is_a: UBERON:0006598 ! presumptive structure
+intersection_of: UBERON:0006598 ! presumptive structure
+intersection_of: has_potential_to_develop_into UBERON:0001555 ! digestive tract
+relationship: existence_starts_during UBERON:0000109 ! gastrula stage
+relationship: has_developmental_contribution_from UBERON:0000925 ! endoderm
+relationship: has_developmental_contribution_from UBERON:0000926 ! mesoderm
+relationship: has_potential_to_develop_into UBERON:0001555 ! digestive tract
+property_value: development_notes "The endodermal cells generate only the lining of the digestive tube and its glands; mesodermal mesenchyme cells will surround this tube to provide the muscles for peristalsis" xsd:string {source="NCBIBook:NBK10107"}
[Term]
-id: XAO:1000004
-name: cleavage stage
-namespace: xenopus_developmental_stage
-def: "Embryonic stage during which the zygote undergoes synchronous divisions into 2, 4, 8, 16, etc. blastomeres, comprising Nieuwkoop and Faber stages 2 to 6.5." [ISBN:0471209627, ISBN:0815318960]
-subset: life_stage
-synonym: "cleavage" EXACT []
-xref: UBERON:0000107
-is_a: UBERON:0000107 ! cleavage stage
-is_a: XAO:1000012 ! embryonic stage
-intersection_of: UBERON:0000107 ! cleavage stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-property_value: IAO:0000589 "cleavage stage (xenopus)" xsd:string
+id: UBERON:0007135
+name: neural keel
+namespace: uberon
+def: "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section." [ZFIN:ZDB-PUB-961014-576]
+subset: efo_slim
+synonym: "presumptive central nervous system" RELATED [ZFA:0000131]
+xref: EFO:0003497
+xref: TAO:0000131
+xref: ZFA:0000131
+is_a: UBERON:0016879 ! future central nervous system
+relationship: develops_from UBERON:0003075 ! neural plate
+property_value: external_definition "An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000131", ontology="TAO", source="ZFIN:curator"}
[Term]
-id: XAO:1000005
-name: gastrula stage
-namespace: xenopus_developmental_stage
-def: "Embryonic stage during which gastrulation takes place, with a proportion of cells migrating below the surface of the embryo to form two inner layers (endoderm and mesoderm) and the cells which remain outside spreading over the whole surface of the embryo to form the ectoderm; comprising Nieuwkoop and Faber stages 10 to 12.5." [ISBN:0471209627, ISBN:0815318960]
+id: UBERON:0007220
+name: late embryonic stage
+namespace: uberon
+def: "An embryo stage that covers late steps of the embryogenesis with a fully formed embryo still developing before birth or egg hatching." [https://orcid.org/0000-0003-3308-6245]
subset: life_stage
-synonym: "gastrula" EXACT []
-xref: UBERON:0000109
-is_a: UBERON:0000109 ! gastrula stage
-is_a: XAO:1000012 ! embryonic stage
-intersection_of: UBERON:0000109 ! gastrula stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000003 ! blastula stage
-property_value: IAO:0000589 "gastrula stage (xenopus)" xsd:string
+synonym: "embryo late (growth) stage" EXACT [MIAA:0000399]
+synonym: "embryo late growth stage" RELATED [BTO:0000449]
+synonym: "embryo late stage" RELATED [BTO:0000449]
+synonym: "fetal stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
+synonym: "fetus" NARROW [MIAA:0000399]
+synonym: "fetus stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
+xref: EV:0300011
+xref: EVM:2990031
+xref: FBdv:00005333
+xref: FMA:63631
+xref: HsapDv:0000037 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MIAA:0000399
+xref: MmusDv:0000031 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000011 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000080 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000023
+xref: SCTID:367619004
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000068 ! embryo stage
+relationship: preceded_by UBERON:0000111 ! organogenesis stage
+relationship: preceded_by UBERON:0004707 ! pharyngula stage
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/355" xsd:anyURI
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/565" xsd:anyURI
[Term]
-id: XAO:1000006
-name: neurula stage
-namespace: xenopus_developmental_stage
-def: "Embryonic stage during which the future nervous system appears as a thickened plate in dorsal ectoderm, the plate then rolling up at its sides to form a tube; comprising Nieuwkoop and Faber stages 13 to 21." [ISBN:0471209627, ISBN:0815318960]
+id: UBERON:0007221
+name: neonate stage
+namespace: uberon
+def: "Of or pertaining to the period of time immediately following birth, or to the newborn." [http://en.wiktionary.org/wiki/neonatal, Wikipedia:Infant]
subset: life_stage
-synonym: "neurula" EXACT []
-xref: UBERON:0000110
-is_a: UBERON:0000110 ! neurula stage
-is_a: XAO:1000012 ! embryonic stage
-intersection_of: UBERON:0000110 ! neurula stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000005 ! gastrula stage
-property_value: IAO:0000589 "neurula stage (xenopus)" xsd:string
+synonym: "fledgling stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
+synonym: "hatchling" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
+synonym: "hatchling stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
+synonym: "infant stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
+synonym: "neonatal stage" EXACT [OBOL:automatic]
+synonym: "nestling stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165]
+synonym: "newborn stage" RELATED [https://orcid.org/0000-0002-6601-2165]
+synonym: "pouch stage" NARROW SENSU [NCBITaxon:9263]
+synonym: "puggle" NARROW SENSU [NCBITaxon:189497]
+synonym: "puggle stage" NARROW SENSU [NCBITaxon:189497]
+xref: BTO:0001762
+xref: EV:0300037
+xref: HsapDv:0000262 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: http://neurolex.org/wiki/Category\:Infant_organism
+xref: http://neurolex.org/wiki/Category\:Newborn_organism
+xref: MmusDv:0000036 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: NIF_Organism:birnlex_695
+xref: obo:MdomDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000046 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000013 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000009 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: OGES:000025
+xref: Wikipedia:Infant
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000112 ! sexually immature stage
+property_value: editor_note "consider splitting infant/newborn" xsd:string
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/350" xsd:anyURI
[Term]
-id: XAO:1000007
-name: tailbud stage
-namespace: xenopus_developmental_stage
-def: "Embryonic stage during which neurulation is completed and tail formation begins, visible by an emerging tail primordium; comprising Nieuwkoop and Faber stages 22 to 44 (feeding), including the beginning of hatching (NF stage 35/36)." [DOI:10.1038/nrg1347, ISBN:0815318960]
+id: UBERON:0007222
+name: late adult stage
+namespace: uberon
subset: life_stage
-xref: UBERON:0009741
-is_a: XAO:1000012 ! embryonic stage
-relationship: immediately_preceded_by XAO:1000006 ! neurula stage
+synonym: "elderly" RELATED [EV:0300123]
+synonym: "elderly stage" RELATED [EV:0300123]
+synonym: "geriatric" RELATED [EV:0300123]
+synonym: "geriatric stage" RELATED [EV:0300123]
+xref: EV:0300123
+xref: HsapDv:0000227 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000134 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: NCIT:C16268
+xref: NIF_Organism:birnlex_691
+xref: obo:AcarDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:BtauDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CfamDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CporDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:EcabDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:FcatDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000080 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000008 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000025 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000045 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OanaDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000008 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OcunDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000040 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000039 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000060 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000008 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: UMLS:C0001792 {source="ncithesaurus:Elderly"}
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000113 ! post-juvenile adult stage
+relationship: preceded_by UBERON:0018241 ! prime adult stage
+property_value: seeAlso "https://github.com/obophenotype/uberon/issues/495" xsd:anyURI
[Term]
-id: XAO:1000008
-name: tadpole stage
-namespace: xenopus_developmental_stage
-def: "The post-embryonic Xenopus developmental stage from feeding to the end of metamorphosis, encompassing Weisz's first-form tadpole (equivalent to Nieuwkoop and Faber 45 to 49), second-form tadpole (NF 49 to 56) and third-form tadpole (NF 56 to 60-plus) stages." [ISBN:0471209627, ISSN:0003-276X]
+id: UBERON:0007232
+name: 2 cell stage
+namespace: uberon
subset: life_stage
-synonym: "larva" RELATED []
-synonym: "larval stage" RELATED []
-synonym: "tadpole" EXACT []
-xref: UBERON:0009849
-is_a: UBERON:0009849 ! tadpole stage
-is_a: XAO:1000095 ! post-embryonic stage
-intersection_of: UBERON:0009849 ! tadpole stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000007 ! tailbud stage
-property_value: IAO:0000589 "tadpole stage (xenopus)" xsd:string
+synonym: "2-cell stage" EXACT [XAO:1000011]
+synonym: "Cleavage:2-cell" NARROW [ZFS:0000002]
+synonym: "NF stage 2 (2-cell)" NARROW SENSU [XAO:1000011]
+synonym: "two-cell stage" EXACT [OBOL:automatic]
+xref: obo:SsalDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: XAO:1000011
+xref: XtroDO:0000006
+xref: ZFS:0000002
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by UBERON:0000106 ! zygote stage
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: XAO:1000010
-name: juvenile frog stage
-namespace: xenopus_developmental_stage
-def: "Xenopus developmental stage that corresponds to a sexually immature post-tadpole animal." [https://orcid.org/0000-0002-9611-1279]
+id: UBERON:0007233
+name: 4 cell stage
+namespace: uberon
subset: life_stage
-synonym: "juvenile frog" EXACT []
-xref: UBERON:0000112
-is_a: UBERON:0000112 ! sexually immature stage
-is_a: XAO:1000095 ! post-embryonic stage
-intersection_of: UBERON:0000112 ! sexually immature stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000008 ! tadpole stage
-property_value: IAO:0000589 "sexually immature stage (xenopus)" xsd:string
+synonym: "4-cell stage" EXACT [XAO:1000013]
+synonym: "Cleavage:4-cell" NARROW [ZFS:0000003]
+synonym: "four-cell stage" EXACT [OBOL:automatic]
+synonym: "NF stage 3 (4-cell)" NARROW SENSU [XAO:1000013]
+xref: obo:SsalDv_0000006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: XAO:1000013
+xref: XtroDO:0000007
+xref: ZFS:0000003
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by UBERON:0007232 ! 2 cell stage
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: XAO:1000011
-name: NF stage 2 (2-cell)
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 2, corresponding to an embryo of age 1 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Advanced two cell stage. First cleavage groove has reached vegetal pole. Ventral side of blastomeres darker than dorsal side. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0007236
+name: 8 cell stage
+namespace: uberon
subset: life_stage
-synonym: "2-cell stage" EXACT []
-xref: UBERON:0007232
-is_a: UBERON:0007232 ! 2 cell stage
-is_a: XAO:1000094 ! NF stage
-intersection_of: UBERON:0007232 ! 2 cell stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000028 ! NF stage 2-
-relationship: part_of XAO:1000004 ! cleavage stage
-property_value: IAO:0000589 "2 cell stage (xenopus)" xsd:string
+synonym: "8-cell stage" EXACT [XAO:1000014]
+synonym: "Cleavage:8-cell" NARROW [ZFS:0000004]
+synonym: "eight-cell stage" EXACT [OBOL:automatic]
+synonym: "NF stage 4 (8-cell)" NARROW SENSU [XAO:1000014]
+xref: obo:SsalDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: XAO:1000014
+xref: XtroDO:0000008
+xref: ZFS:0000004
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by UBERON:0007233 ! 4 cell stage
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: XAO:1000012
-name: embryonic stage
-namespace: xenopus_developmental_stage
-def: "Xenopus developmental stage that starts with fertilization and ends with the formed feeding larva." [Bgee:curator, https://orcid.org/0000-0002-9611-1279]
-subset: life_stage
-xref: UBERON:0000068
-is_a: UBERON:0000068 ! embryo stage
-is_a: XAO:1000000 ! Xenopus developmental stage
-intersection_of: UBERON:0000068 ! embryo stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000082 ! unfertilized egg stage
-property_value: IAO:0000589 "embryo stage (xenopus)" xsd:string
+id: UBERON:0007284
+name: presumptive neural plate
+namespace: uberon
+def: "A presumptive structure that has the potential to develop into a neural plate." [OBOL:automatic]
+subset: efo_slim
+synonym: "prospective neuroectoderm" EXACT [ZFA:0000063]
+synonym: "prospective vegetal ectoderm" EXACT [ZFA:0000063]
+xref: EFO:0003424
+xref: TAO:0000063
+xref: ZFA:0000063
+is_a: UBERON:0016879 ! future central nervous system
+intersection_of: UBERON:0006598 ! presumptive structure
+intersection_of: has_potential_to_develop_into UBERON:0003075 ! neural plate
+relationship: develops_from UBERON:0002346 ! neurectoderm
+relationship: has_potential_to_develop_into UBERON:0003075 ! neural plate
+relationship: part_of UBERON:0004734 ! gastrula
+property_value: editor_note "consider merging" xsd:string
+property_value: external_definition "Region of the gastrula which gives rise to the neural plate.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000063", ontology="TAO", source="ZFIN:curator"}
[Term]
-id: XAO:1000013
-name: NF stage 3 (4-cell)
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 3, corresponding to an embryo of age 2 hr at 22-24 Celsius and having the following external morphological criteria: Advanced four-cell stage. Second cleavage groove has reached vegetal pole. In animal view dorsal blastomeres usually smaller than ventral ones; the latter darker than the former. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0008264
+name: echinopluteus larval stage
+namespace: uberon
+def: "Larval stage in echinoderms characterized by a planktonic and feeding larval form that possesses limb-like outgrowths bearing ciliated bands." [http://www.encyclopedia.com/doc/1O8-echinopluteuslarva.html]
subset: life_stage
-synonym: "4-cell stage" EXACT []
-xref: UBERON:0007233
-is_a: UBERON:0007233 ! 4 cell stage
-is_a: XAO:1000094 ! NF stage
-intersection_of: UBERON:0007233 ! 4 cell stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000011 ! NF stage 2 (2-cell)
-relationship: part_of XAO:1000004 ! cleavage stage
-property_value: IAO:0000589 "4 cell stage (xenopus)" xsd:string
+synonym: "pluteus larval stage" EXACT []
+is_a: UBERON:0000069 ! larval stage
+relationship: in_taxon NCBITaxon:7586 ! Echinodermata
[Term]
-id: XAO:1000014
-name: NF stage 4 (8-cell)
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 4, corresponding to an embryo of age 2 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Advanced eight cell stage. Dorsal micro- and macromeres usually smaller than ventral ones; dorsal micromeres less pigmented than ventral ones. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0009849
+name: tadpole stage
+namespace: uberon
+def: "Wholly aquatic larval stage in the life cycle of an amphibian, particularly of a frog or toad[WP]. XAO: The stages from feeding to the end of metamorphosis. Encompasses Weisz's first-form tadpole (equivalent to NF stages 45 to 49), second-form tadpole (NF 49 to 56) and third-form tadpole (NF 56 to 60-plus) stages." [ISBN:0471209627, ISSN:0003-276X, Wikipedia:Tadpole]
subset: life_stage
-synonym: "8-cell stage" EXACT []
-xref: UBERON:0007236
-is_a: UBERON:0007236 ! 8 cell stage
-is_a: XAO:1000094 ! NF stage
-intersection_of: UBERON:0007236 ! 8 cell stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000013 ! NF stage 3 (4-cell)
-relationship: part_of XAO:1000004 ! cleavage stage
-property_value: IAO:0000589 "8 cell stage (xenopus)" xsd:string
+xref: Wikipedia:Tadpole
+xref: XAO:1000008
+is_a: UBERON:0004728 ! amphibian larval stage
[Term]
-id: XAO:1000015
-name: NF stage 5 (16-cell)
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 5, corresponding to an embryo of age 2 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Advanced sixteen cell stage. Dorsal micromeres distinctly smaller and less pigmented than ventral ones. Macromeres entirely separated by cleavage grooves. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
-subset: life_stage
-synonym: "16-cell stage" EXACT []
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000014 ! NF stage 4 (8-cell)
-relationship: part_of XAO:1000004 ! cleavage stage
+id: UBERON:0009850
+name: nematode larva
+namespace: uberon
+def: "A multicellular organism that existence_starts_and_ends_during a nematode larval stage." [OBOL:automatic]
+is_a: UBERON:0002548 ! larva
+intersection_of: UBERON:0000468 ! multicellular organism
+intersection_of: existence_starts_and_ends_during UBERON:0004729 ! nematode larval stage
+relationship: existence_starts_and_ends_during UBERON:0004729 ! nematode larval stage
+relationship: present_in_taxon NCBITaxon:6239
[Term]
-id: XAO:1000016
-name: NF stage 6 (32-cell)
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 6, corresponding to an embryo of age 3 hr at 22-24 Celsius and having the following external morphological criteria: Advanced thirty-two cell stage. Distinction between dorsal and ventral micromeres as in preceding stage. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
-subset: life_stage
-synonym: "32-cell stage" EXACT []
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000015 ! NF stage 5 (16-cell)
-relationship: part_of XAO:1000004 ! cleavage stage
+id: UBERON:0010000
+name: multicellular anatomical structure
+namespace: uberon
+def: "An anatomical structure that has more than one cell as a part." [CARO:0010000]
+subset: common_anatomy
+subset: upper_level
+synonym: "multicellular structure" EXACT [FBbt:00100313]
+xref: CARO:0010000
+xref: FBbt:00100313 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+is_a: UBERON:0000061 ! anatomical structure
+intersection_of: UBERON:0000061 ! anatomical structure
+intersection_of: has_quality PATO:0001993 ! multicellular
+relationship: has_part CL:0000000 ! cell
+relationship: has_quality PATO:0001993 ! multicellular
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
[Term]
-id: XAO:1000017
-name: NF stage 7
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 7 (64-cell stage), corresponding to an embryo of age 4 hr at 22-24 Celsius and having the following external morphological criteria: Large-cell blastula stage. In animal view about 10 micromeres along meridian. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
-subset: life_stage
-synonym: "64-cell stage" EXACT []
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000029 ! NF stage 6.5
-relationship: part_of XAO:1000003 ! blastula stage
+id: UBERON:0010199
+name: bona-fide anatomical boundary
+namespace: uberon
+def: "An anatomical boundary that corresponds to some physical discontinuity." [CARO:0001004]
+comment: One might argue that all boundaries are actually fiat in the sense that there must be some fiat element at a fine enough scale of granularity. This ontology choses to ignore this issue as below the level of granularity relevant to anatomy. (DOS121102)
+subset: upper_level
+xref: CARO:0001004
+is_a: UBERON:0000466 {source="CARO"} ! immaterial anatomical entity
[Term]
-id: XAO:1000018
-name: NF stage 8
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 8 (128-cell stage), corresponding to an embryo of age 5 hr at 22-24 Celsius and having the following external morphological criteria: Medium-cell blastula stage. Surface not yet entirely smooth. Border of animal pigment cap more diffuse at dorsal than at lateral and ventral sides. Gradual transition in cell size from animal to vegetative pole. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
-subset: life_stage
-synonym: "128-cell stage" EXACT []
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000017 ! NF stage 7
-relationship: part_of XAO:1000003 ! blastula stage
+id: UBERON:0010316
+name: germ layer / neural crest
+namespace: uberon
+is_a: UBERON:0002050 ! embryonic structure
+is_a: UBERON:0005291 ! embryonic tissue
+relationship: develops_from UBERON:0002532 ! epiblast (generic)
[Term]
-id: XAO:1000019
-name: NF stage 9
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 9, corresponding to an embryo of age 7 hr at 22-24 Celsius and having the following external morphological criteria: Fine-cell blastula stage. Animal cells smaller at dorsal than at ventral side. Border between marginal zone and vegetative field distinct, particularly dorsally, owing to difference in cell size. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000018 ! NF stage 8
-relationship: part_of XAO:1000003 ! blastula stage
+id: UBERON:0010371
+name: ecto-epithelium
+namespace: uberon
+def: "Epithelium composed of cells that develops from the ectoderm[FMA,modified]." [FMA:69064]
+synonym: "ectoderm-derived epithelium" EXACT []
+xref: FMA:69064
+is_a: UBERON:0000483 ! epithelium
+is_a: UBERON:0004121 ! ectoderm-derived structure
+intersection_of: UBERON:0000483 ! epithelium
+intersection_of: develops_from UBERON:0000924 ! ectoderm
+relationship: composed_primarily_of CL:0002077 ! ecto-epithelial cell
[Term]
-id: XAO:1000020
-name: NF stage 10
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 10, corresponding to an embryo of age 9 hr at 22-24 Celsius and having the following external morphological criteria: Initial gastrula stage. First indication of blastopore only by pigment concentration. No formation of groove. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000019 ! NF stage 9
-relationship: part_of XAO:1000005 ! gastrula stage
+id: UBERON:0011137
+name: axial skeletal system
+namespace: uberon
+def: "Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [https://orcid.org/0000-0002-6601-2165]
+xref: FMA:7483
+is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system
+relationship: has_part UBERON:0000982 ! skeletal joint
+property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton" xsd:anyURI
[Term]
-id: XAO:1000021
-name: NF stage 11
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 11, corresponding to an embryo of age 11 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Horse-shoe-shaped blastopore stage. Blastopore groove surrounding about half of future yolk plug and indicated at its ventral side; future yolk plug often rounded rectangular, slightly elongated in dorso-ventral direction, diameter more than two-fifths of diameter of egg (plus or minus 50 degrees of circumference). Length: 1.4 - 1.5 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000031 ! NF stage 10.5
-relationship: part_of XAO:1000005 ! gastrula stage
+id: UBERON:0011216
+name: organ system subdivision
+namespace: uberon
+def: "A subdivision of an anatomical system." [http://orcid.org/0000-0002-6601-2165]
+subset: common_anatomy
+subset: human_reference_atlas
+subset: upper_level
+xref: FBbt:00007330 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"}
+xref: FMA:67509
+xref: SCTID:91690000
+is_a: UBERON:0010000 {source="FBbt"} ! multicellular anatomical structure
+relationship: part_of UBERON:0000467 ! anatomical system
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+relationship: present_in_taxon NCBITaxon:9606
[Term]
-id: XAO:1000022
-name: NF stage 12
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 12, corresponding to an embryo of age 13 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Medium yolk plug stage. Yolk plug circular; diameter somewhat less than one fourth of diameter of egg (plus or minus 25 degrees). More and less pigmented fields radiating from yolk plug. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0012101
+name: perinatal stage
+namespace: uberon
+def: "The period spanning the range immediately before and after birth." [http://orcid.org/0000-0002-6601-2165]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000032 ! NF stage 11.5
-relationship: part_of XAO:1000005 ! gastrula stage
+synonym: "paranatal stage" NARROW []
+is_a: UBERON:0000105 ! life cycle stage
+relationship: overlaps UBERON:0000068 ! embryo stage
+relationship: overlaps UBERON:0000092 ! post-embryonic stage
+property_value: taxon_notes "In birds, the paranatal stage starts when the beak penetrates into the air pocket (air cell) between the inner and outer shell membranes" xsd:string
[Term]
-id: XAO:1000023
-name: NF stage 13
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 13, corresponding to an embryo of age 14 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Slit-blastopore stage. Neural plate faintly delimited; slight elevation of its rostral part and slight flattening of its caudal part. Caudal part of median groove formed. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000033 ! NF stage 12.5
-relationship: part_of XAO:1000006 ! neurula stage
+id: UBERON:0013522
+name: subdivision of tube
+namespace: uberon
+is_a: UBERON:0000064 ! organ part
+relationship: has_part UBERON:0000060 ! anatomical wall
+relationship: has_part UBERON:0000464 ! anatomical space
+relationship: part_of UBERON:0000025 ! tube
+relationship: subdivision_of UBERON:0000025 ! tube
[Term]
-id: XAO:1000024
-name: NF stage 14
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 14, corresponding to an embryo of age 16 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Neural plate stage. Cerebral part of neural plate bent downwards, with median elevation at rostral end of median groove. Initial elevation of neural folds, most pronounced in future nucal region. Blastopore always slit-shaped. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000023 ! NF stage 13
-relationship: part_of XAO:1000006 ! neurula stage
+id: UBERON:0013686
+name: anatomical conduit space
+namespace: uberon
+def: "An anatomical space which is the lumen of some anatomical conduit and connects two or more spaces together[FMA,modified]." [FMA:9338, http://orcid.org/0000-0002-6601-2165]
+subset: common_anatomy
+synonym: "foramen space" NARROW []
+xref: FMA:9338
+is_a: UBERON:0000464 {source="FMA"} ! anatomical space
+relationship: connects UBERON:0000464 {cardinality="2"} ! anatomical space
+relationship: luminal_space_of UBERON:0004111 ! anatomical conduit
+relationship: part_of UBERON:0004111 ! anatomical conduit
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
[Term]
-id: XAO:1000025
-name: NF stage 15
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 15, corresponding to an embryo of age 17 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Early neural fold stage. Presumptive cement gland faintly circumscribed. Anterior part of neural plate roundish. Neural folds distinct, except medio-rostrally; initial formation of sharp inner ridges on neural folds in rhombencephalic region. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
+id: UBERON:0014405
+name: nymph stage
+namespace: uberon
+def: "A larval stage of that is the immature stage of some invertebrates that undergoe gradual metamorphosis (hemimetabolism) before reaching its adult stage." [UBERON:cjm]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000024 ! NF stage 14
-relationship: part_of XAO:1000006 ! neurula stage
+synonym: "nymph" RELATED [BTO:0000954]
+xref: BTO:0000954
+xref: Wikipedia:Nymph_(biology)
+is_a: UBERON:0000069 ! larval stage
+relationship: in_taxon NCBITaxon:33213 ! Bilateria
+relationship: never_in_taxon NCBITaxon:7742 ! Vertebrata
+property_value: external_definition "Any of various immature insects; especially: a larva of an insect (as a grasshopper, true bug, or mayfly) with incomplete metamorphosis that differs from the imago especially in size and in its incompletely developed wings and genitalia[BTO:0000954]." xsd:string {source="BTO:0000954"}
[Term]
-id: XAO:1000026
-name: NF stage 16
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 16, corresponding to an embryo of age 18 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Mid neural fold stage. Anterior part of neural plate rectangular; darkly pigmented eye anlagen present; neural plate sharply constricted in the middle. Inner ridges on neural folds forming angle of about 90 degrees with neural plate in rhombencephalic region. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
+id: UBERON:0014406
+name: nauplius stage
+namespace: uberon
+def: "The free-swimming first stage of the larva of certain crustaceans, having an unsegmented body with three pairs of appendages and a single median eye. The eye is known for that reason as the 'naupliar eye', and is often absent in later developmental stages, although it is retained into the adult form in some groups, such as the Notostraca." [Wikipedia:Crustacean_larvae#Nauplius]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000025 ! NF stage 15
-relationship: part_of XAO:1000006 ! neurula stage
+synonym: "nauplius" RELATED [BTO:0000915]
+xref: BTO:0000915
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0018378 ! crustacean larval stage
+property_value: external_definition "A crustacean larva in usually the first stage after leaving the egg and with three pairs of appendages, a median eye, and little or no segmentation[BTO:0000915]." xsd:string {source="BTO:0000915"}
[Term]
-id: XAO:1000027
-name: NF stage 17
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 17, corresponding to an embryo of age 18 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Late neural fold stage. Anterior part of neural plate oblong triangular, angles formed by eye anlagen. Neural folds approaching each other from blastopore up to anterior trunk region. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
+id: UBERON:0014856
+name: cysticercus stage
+namespace: uberon
+def: "The larval form of any of the Taenia tapeworms." [BTO:0003168, http://www.medterms.com/]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000026 ! NF stage 16
-relationship: part_of XAO:1000006 ! neurula stage
+synonym: "cysticercus" EXACT [BTO:0003168]
+xref: BTO:0003168
+is_a: UBERON:0000105 ! life cycle stage
+relationship: in_taxon NCBITaxon:6157 ! Platyhelminthes
+relationship: part_of UBERON:0000069 ! larval stage
[Term]
-id: XAO:1000028
-name: NF stage 2-
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 2-, corresponding to an embryo of age 1 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Beginning of first cleavage. First cleavage groove has not yet reached vegetal pole. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0014857
+name: zoea stage
+namespace: uberon
+def: "A crustacean larval stage characterised by the use of the thoracic appendages for swimming." [Wikipedia:Crustacean_larvae#Zoea]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000001 ! NF stage 1
-relationship: part_of XAO:1000004 ! cleavage stage
+synonym: "zoea" RELATED []
+is_a: UBERON:0000105 ! life cycle stage
+relationship: in_taxon NCBITaxon:6657 ! Crustacea
+relationship: part_of UBERON:0018378 ! crustacean larval stage
+relationship: preceded_by UBERON:0014406 ! nauplius stage
[Term]
-id: XAO:1000029
-name: NF stage 6.5
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 6.5, corresponding to an embryo of age 3 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Morula stage. About 48 blastomeres. In animal view about 6 micromeres along meridian. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0014858
+name: crustacean post-larval stage
+namespace: uberon
+def: "A crustacean larval stage characterised by the use of abdominal appendages (pleopods) for propulsion." [Wikipedia:Crustacean_larvae#Post-larval]
subset: life_stage
-synonym: "morula" RELATED [ISBN:0815318960]
-xref: UBERON:0000085
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000016 ! NF stage 6 (32-cell)
-relationship: part_of XAO:1000004 ! cleavage stage
+synonym: "glaucothoe stage (hermit crab)" NARROW []
+synonym: "parva stage (shrimp)" NARROW []
+synonym: "post-larva" RELATED []
+synonym: "post-larval" RELATED []
+synonym: "post-larval stage" RELATED []
+synonym: "postlarva" RELATED []
+xref: BTO:0002655
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0018378 ! crustacean larval stage
[Term]
-id: XAO:1000030
-name: NF stage 10.25
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 10.25, corresponding to an embryo of age 10 hr at 22-24 Celsius and having the following external morphological criteria: Early gastrula stage. First formation of dorsal blastopore groove; the groove is still straight. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0014859
+name: megalopa stage
+namespace: uberon
+def: "The crustacean post-larval stage of a crab." [http://orcid.org/0000-0002-6601-2165]
subset: life_stage
-synonym: "NF stage 10+" EXACT []
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000020 ! NF stage 10
-relationship: part_of XAO:1000005 ! gastrula stage
+synonym: "megalopa" RELATED []
+is_a: UBERON:0014858 ! crustacean post-larval stage
+property_value: editor_note "Consider merging into parent" xsd:string
[Term]
-id: XAO:1000031
-name: NF stage 10.5
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 10.5, corresponding to an embryo of age 11 hr at 22-24 Celsius and having the following external morphological criteria: Crescent-shaped blastopore stage. Blastopore groove angular. Vegetal field slightly decreased in size, ventral border of future yolk plug indicated by pigment contraction. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0014860
+name: copepodite stage
+namespace: uberon
+def: "A development stage of copepods which follows the nauplius stage. It is segmented with more than 3 pairs of appendages." [http://www.encyclo.co.uk/define/Copepodite]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000030 ! NF stage 10.25
-relationship: part_of XAO:1000005 ! gastrula stage
+synonym: "copepodite" RELATED []
+is_a: UBERON:0000105 ! life cycle stage
+relationship: in_taxon NCBITaxon:6830 ! Copepoda
+relationship: part_of UBERON:0018378 ! crustacean larval stage
+relationship: preceded_by UBERON:0014406 ! nauplius stage
[Term]
-id: XAO:1000032
-name: NF stage 11.5
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 11.5, corresponding to an embryo of age 12 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Large yolk plug stage. Blastopore groove closed ventrally; yolk plug not yet quite circular. At ventral side concentrated superficial pigment still visible. Diameter of yolk plug about a third of diameter of egg (plus or minus 40 degrees). Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0014861
+name: glaucothoe stage
+namespace: uberon
+def: "A developmental stage in a hermit crab that has completed the swimming larval stages." [http://www.encyclo.co.uk/define/Copepodite]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000021 ! NF stage 11
-relationship: part_of XAO:1000005 ! gastrula stage
+synonym: "glaucothoe" RELATED []
+is_a: UBERON:0000105 ! life cycle stage
+relationship: in_taxon NCBITaxon:6657 ! Crustacea
+relationship: part_of UBERON:0018378 ! crustacean larval stage
[Term]
-id: XAO:1000033
-name: NF stage 12.5
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 12.5, corresponding to an embryo of age 14 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Small yolk plug stage. Future position of neural plate and median groove indicated by darker pigment lines. Yolk plug usually ovoid, variable in size. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
+id: UBERON:0014862
+name: trochophore stage
+namespace: uberon
+def: "A larval stage of a trochozoan in which the organism is in free-swimming planktonic form with several bands of cilia[WP,modified]." [Wikipedia:Trochophore]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000022 ! NF stage 12
-relationship: part_of XAO:1000005 ! gastrula stage
+synonym: "trochophore" RELATED []
+synonym: "trocophore" RELATED []
+xref: Wikipedia:Trochophore
+is_a: UBERON:0000105 ! life cycle stage
+relationship: in_taxon NCBITaxon:33317 ! Protostomia
+relationship: part_of UBERON:0000069 ! larval stage
[Term]
-id: XAO:1000034
-name: NF stage 18
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 18, corresponding to an embryo of age 19 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Neural groove stage. Anterior part of neural plate narrow, more or less club-shaped, often narrower towards rostral end. Parallel neural folds in trunk region very close to each other, not yet touching. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
+id: UBERON:0014863
+name: veliger stage
+namespace: uberon
+def: "The characteristic larval stage of the gastropod, bivalve and scaphopod taxonomic classes. It is produced following either the embryonic or trochophore larval stage of development." [Wikipedia:Veliger]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000027 ! NF stage 17
-relationship: part_of XAO:1000006 ! neurula stage
+synonym: "veliger" RELATED []
+xref: Wikipedia:Veliger
+is_a: UBERON:0000105 ! life cycle stage
+relationship: in_taxon NCBITaxon:6447 ! Mollusca
+relationship: part_of UBERON:0000069 ! larval stage
[Term]
-id: XAO:1000035
-name: NF stage 19
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 19, corresponding to an embryo of age 20 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Initial neural tube stage. Neural folds touching each other, except for inconstant openings at anterior and posterior end and behind nucal region. Considerable lateral extension of brain. Lateral outline of embryo still convex. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
+id: UBERON:0014864
+name: caterpillar stage
+namespace: uberon
+def: "The larval stage of members of the order Lepidoptera." [Wikipedia:Caterpillar]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000034 ! NF stage 18
-relationship: part_of XAO:1000006 ! neurula stage
+synonym: "caterpillar" RELATED []
+xref: Wikipedia:Caterpillar
+is_a: UBERON:0000069 ! larval stage
+relationship: in_taxon NCBITaxon:7088 ! Lepidoptera
[Term]
-id: XAO:1000036
-name: NF stage 20
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 20, corresponding to an embryo of age 21 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Neural folds fused, suture still present. The two eye anlagen showing through dumb-bell-shaped, eyes hardly protruding. Beginning of stretching of embryos. Lateral outline flat. Length: 1.7 - 1.8 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000035 ! NF stage 19
-relationship: part_of XAO:1000006 ! neurula stage
+id: UBERON:0016879
+name: future central nervous system
+namespace: uberon
+alt_id: UBERON:3000469
+def: "Primordium that develops into the central nervous system." [http://orcid.org/0000-0002-6601-2165]
+synonym: "future CNS" EXACT []
+synonym: "presumptive central nervous system" EXACT []
+is_a: UBERON:0006598 ! presumptive structure
+intersection_of: UBERON:0006598 ! presumptive structure
+intersection_of: has_potential_to_develop_into UBERON:0001017 ! central nervous system
+relationship: develops_from UBERON:0000924 ! ectoderm
+relationship: has_potential_to_develop_into UBERON:0001017 ! central nervous system
+relationship: part_of UBERON:0016880 ! future nervous system
[Term]
-id: XAO:1000037
-name: NF stage 21
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 21, corresponding to an embryo of age 22 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Suture of neural tube completely closed. Delimitation of frontal field by pigment lines. Primary eye vesicles showing through in the form of two separate, obliquely placed oval spots; beginning of protrusion of eyes. Lateral outline of embryo just becoming concave, ventral outline flat. Length: 1.9 - 2.0 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000036 ! NF stage 20
-relationship: part_of XAO:1000006 ! neurula stage
+id: UBERON:0016880
+name: future nervous system
+namespace: uberon
+alt_id: UBERON:3000477
+def: "Primordium that develops into the nervous system." [http://orcid.org/0000-0002-6601-2165]
+synonym: "presumptive nervous system" EXACT [AAO:0000477]
+xref: AAO:0000477
+is_a: UBERON:0006598 ! presumptive structure
+intersection_of: UBERON:0006598 ! presumptive structure
+intersection_of: has_potential_to_develop_into UBERON:0001016 ! nervous system
+relationship: existence_starts_during_or_after UBERON:0000111 ! organogenesis stage
+relationship: has_potential_to_develop_into UBERON:0001016 ! nervous system
[Term]
-id: XAO:1000038
-name: NF stage 22
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 22, corresponding to an embryo of age 24 hr at 22-24 Celsius and having the following external morphological criteria: Distinct protrusion of eyes. Initial groove between jaw- and gill-areas only at latero-dorsal side. Lateral and ventral outlines of embryo slightly concave. Anal opening displaced to ventral side. Vitelline membrane becoming wider. Length: 2.0 - 2.2 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000037 ! NF stage 21
-relationship: part_of XAO:1000002 ! early tailbud stage
+id: UBERON:0016887
+name: entire extraembryonic component
+namespace: http://www.xspan.org/obo.owl#
+namespace: uberon
+def: "The part of the conceptus that may be lost before birth or will be discarded at birth, or when the embryo becomes an independent organism." [AEO:0000195, AEO:JB]
+synonym: "extra-embryonic component" EXACT []
+synonym: "extraembryonic component" EXACT [AEO:0000195]
+xref: AEO:0000195
+xref: EHDAA2:0000003
+xref: EMAPA:16042
+is_a: UBERON:0000481 {source="AEO"} ! multi-tissue structure
+relationship: adjacent_to UBERON:0002050 ! embryonic structure
+relationship: existence_starts_and_ends_during UBERON:0000068 ! embryo stage
+relationship: part_of UBERON:0004716 {source="AEO"} ! conceptus
+property_value: IAO:0000589 "entire extraembryonic component (AEO)" xsd:string
[Term]
-id: XAO:1000039
-name: NF stage 23
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 23, corresponding to an embryo of age 1 day, 45 min at 22-24 Celsius and having the following external morphological criteria: Jaw- and gill-areas completely separated by groove. Ventral outline of embryo more concave. Length: 2.2 - 2.4 mm." [ISBN:0815318960]
+id: UBERON:0018241
+name: prime adult stage
+namespace: uberon
+def: "A life cycle stage that starts at completion of development and growth of the sexually mature adult animal, and ends before senescence." [Bgee:AN, https://github.com/obophenotype/uberon/issues/496]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000038 ! NF stage 22
-relationship: part_of XAO:1000002 ! early tailbud stage
+synonym: "adulthood stage" RELATED []
+xref: HsapDv:0000226 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000136 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:AcarDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:BtauDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CfamDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:CporDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:EcabDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:FcatDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000077 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000022 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OanaDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OcunDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000017 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000012 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000059 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000007 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000113 ! post-juvenile adult stage
+property_value: dc:contributor https://github.com/ANiknejad
+property_value: dc:contributor https://github.com/cmungall
+property_value: dc:contributor https://github.com/fbastian
[Term]
-id: XAO:1000040
-name: NF stage 24
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 24, corresponding to an embryo of age 1 day, 2 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Eyes protruding less far laterally than gill-area. Gill-area more prominent than jaw-area, gill-area not yet grooved. Ventral outline of embryo nicked. Tail bud discernible. Initial motor reactions to external stimulation. Length: 2.5 - 2.7 mm." [ISBN:0815318960]
+id: UBERON:0018378
+name: crustacean larval stage
+namespace: uberon
+def: "The larval stage of a crustacean, the stages of which are separated my moults. Typically this goes through a nauplius - zoea - post-larval cycle." [Wikipedia:Crustacean_larvae]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000039 ! NF stage 23
-relationship: part_of XAO:1000002 ! early tailbud stage
+is_a: UBERON:0000069 ! larval stage
+relationship: in_taxon NCBITaxon:6657 ! Crustacea
[Term]
-id: XAO:1000041
-name: NF stage 25
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 25, corresponding to an embryo of age 1 day, 3 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Eyes protruding equally far or further laterally than gill-area. Gill-area grooved. Invagination of otic vesicle indicated by pigment spot. Beginning of fin formation. Length: 2.8 - 3.0 mm." [ISBN:0815318960]
+id: UBERON:0018685
+name: nursing stage
+namespace: uberon
+def: "A mammalian developmental stage that covers the period from birth until weaning." [Bgee:AN]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000040 ! NF stage 24
-relationship: part_of XAO:1000002 ! early tailbud stage
+synonym: "suckling stage" EXACT []
+xref: HsapDv:0000260 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000138 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000032 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000056 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+is_a: UBERON:0000105 ! life cycle stage
+relationship: has_part UBERON:0007221 ! neonate stage
+relationship: in_taxon NCBITaxon:40674 ! Mammalia
+relationship: part_of UBERON:0000092 ! post-embryonic stage
[Term]
-id: XAO:1000042
-name: NF stage 26
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 26, corresponding to an embryo of age 1 day, 5 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Otic vesicle protruding. Pronephros distinctly visible. Myotomes showing through for the first time. Fin somewhat broadened at dorso-caudal end of body. Beginning of spontaneous movements. Length: 3.0 - 3.3 mm." [ISBN:0815318960]
+id: UBERON:0034919
+name: juvenile stage
+namespace: uberon
+def: "The stage of being no more dependent of the nest and/or from caregivers for subsistence while having not reach sexual maturity." [Bgee:AN, https://github.com/obophenotype/uberon/issues/645]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000041 ! NF stage 25
-relationship: part_of XAO:1000002 ! early tailbud stage
+xref: HsapDv:0000271 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000178 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgalDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:GgorDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000014 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:OariDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PpanDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:PtroDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000058 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+is_a: UBERON:0000105 ! life cycle stage
+relationship: part_of UBERON:0000112 ! sexually immature stage
+property_value: dc:contributor https://github.com/ANiknejad
+property_value: dc:contributor https://github.com/cmungall
[Term]
-id: XAO:1000043
-name: NF stage 27
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 27, corresponding to an embryo of age 1 day, 7 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Lateral flattening of eyes. Fin transluscent, except for region behind anus. Tail bud formation accentuated in lateral outline. Length: 3.4 - 3.7 mm." [ISBN:0815318960]
+id: UBERON:0034920
+name: infant stage
+namespace: uberon
+def: "Nursing stage that follows the neonate stage in mammals and ends at weaning." [Bgee:AN, https://github.com/obophenotype/uberon/issues/644]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000042 ! NF stage 26
-relationship: part_of XAO:1000002 ! early tailbud stage
+xref: HsapDv:0000261 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: MmusDv:0000177 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MdomDv_0000033 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:MmulDv_0000053 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:RnorDv_0000057 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+xref: obo:SscrDv_0000085 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"}
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by UBERON:0007221 ! neonate stage
+relationship: in_taxon NCBITaxon:40674 ! Mammalia
+relationship: part_of UBERON:0018685 ! nursing stage
+property_value: dc:contributor https://github.com/ANiknejad
+property_value: dc:contributor https://github.com/cmungall
[Term]
-id: XAO:1000044
-name: NF stage 28
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 28, corresponding to an embryo of age 1 day, 8 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Fin extending up to anus. Fin broadened and distinctly divided into outer transparent and inner translucent band. Length: 3.8 - 4.0 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000043 ! NF stage 27
-relationship: part_of XAO:1000002 ! early tailbud stage
+id: UBERON:0034921
+name: multi organ part structure
+namespace: uberon
+def: "An multicellular anatomical structure that has subparts of multiple organs as a part." [CARO:0020001]
+subset: common_anatomy
+synonym: "anatomical cluster" RELATED [CARO:0020001]
+xref: CARO:0020001
+is_a: UBERON:0010000 {source="CARO"} ! multicellular anatomical structure
+relationship: composed_primarily_of UBERON:0000064 ! organ part
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
[Term]
-id: XAO:1000045
-name: NF stage 29 and 30
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 29/30, corresponding to an embryo of age 1 day, 11 hr at 22-24 Celsius and having the following external morphological criteria: Gray eye cup showing through for the first time. Fin transparent up to the base over its whole length. Tail bud distinct. Length: 4.0 - 4.5 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000044 ! NF stage 28
-relationship: part_of XAO:1000080 ! late tailbud stage
+id: UBERON:0034925
+name: anatomical collection
+namespace: uberon
+def: "A collection of anatomical structures that are alike in terms of their morphology or developmental origin." [http://orcid.org/0000-0002-6601-2165]
+subset: common_anatomy
+is_a: UBERON:0000465 ! material anatomical entity
+relationship: has_member UBERON:0000061 ! anatomical structure
+relationship: present_in_taxon NCBITaxon:33090
+relationship: present_in_taxon NCBITaxon:33208 ! Metazoa
+relationship: present_in_taxon NCBITaxon:4751
+property_value: editor_note "resolve if this should be a subclass of disconnected anatomical group. Some collections (e.g. the skeleton or skull) are arguably connected" xsd:string
[Term]
-id: XAO:1000046
-name: NF stage 31
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 31, corresponding to an embryo of age 1 day, 13 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Tail bud equally long as broad. Length: 4.2 - 4.8 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000045 ! NF stage 29 and 30
-relationship: part_of XAO:1000080 ! late tailbud stage
+id: UBERON:0034969
+name: epithelial layer of duct
+namespace: uberon
+synonym: "duct epithelium" RELATED []
+synonym: "ductal epithelium" RELATED []
+xref: NCIT:C25787
+xref: UMLS:C1512086
+is_a: UBERON:0003914 ! epithelial tube
+intersection_of: UBERON:0000483 ! epithelium
+intersection_of: part_of UBERON:0000058 ! duct
+relationship: part_of UBERON:0000058 ! duct
[Term]
-id: XAO:1000047
-name: NF stage 32
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 32, corresponding to an embryo of age 1 day, 16 hr at 22-24 Celsius and having the following external morphological criteria: Eye cup horse-shoe-shaped, standing out distinctly. Length of tail bud about 1.5 times its breadth. Length: 4.5 - 5.1 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000046 ! NF stage 31
-relationship: part_of XAO:1000080 ! late tailbud stage
+id: UBERON:0035804
+name: future mouth
+namespace: uberon
+def: "The primordial mouth region of the developing head." [MP:0003119]
+synonym: "primitive mouth" EXACT [FMA:293105]
+synonym: "primordial mouth" EXACT []
+xref: FMA:293105
+is_a: UBERON:0013522 ! subdivision of tube
+relationship: has_part UBERON:0000925 ! endoderm
+relationship: has_part UBERON:0000930 ! stomodeum
+relationship: part_of UBERON:0007026 ! presumptive gut
[Term]
-id: XAO:1000048
-name: NF stage 33 and 34
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 33/34, corresponding to an embryo of age 1 day, 20 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Stomodeal invagination a shallow vertical groove. Dorsal part of eye more pigmented than ventral part; distinct melanophores in dorsal part. Melanophores appearing dorsally on the head and laterally in a row extending from just below the pronephros backwards. Length of tail bud about twice its breadth. Beginning of heart beat. Length: 4.7 - 5.3 mm." [ISBN:0815318960]
+id: UBERON:8000000
+name: first instar larva stage
+namespace: uberon
+def: "The first stage of instar larva stage." [IDOMAL:0000656]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000047 ! NF stage 32
-relationship: part_of XAO:1000080 ! late tailbud stage
+is_a: UBERON:0004730 ! instar larval stage
+relationship: dc-contributor https://orcid.org/0000-0001-5208-3432
[Term]
-id: XAO:1000049
-name: NF stage 35 and 36
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 35/36, corresponding to an embryo of age 2 days, 2 hr at 22-24 Celsius and having the following external morphological criteria: Stomodeal invagination roundish. Eye entirely black, choroid fissure nearly closed. Formation of two gill rudiments, anterior one nipple-shaped. Melanophores appearing on back. Posterior outline of proctodeum still curved. Length of tail bud about three times its breadth. Beginning of hatching. Length: 5.3 - 6.0 mm." [ISBN:0815318960]
+id: UBERON:8000001
+name: second instar larva stage
+namespace: uberon
+def: "The second stage of instar larva stage." [IDOMAL:0000657]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000048 ! NF stage 33 and 34
-relationship: part_of XAO:1000080 ! late tailbud stage
+is_a: UBERON:0004730 ! instar larval stage
+relationship: dc-contributor https://orcid.org/0000-0001-5208-3432
[Term]
-id: XAO:1000050
-name: NF stage 37 and 38
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 37/38, corresponding to an embryo of age 2 days, 5 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Stomodeal invagination much deeper, opening round. Both gill rudiments nipple-shaped, a branch of the anterior one indicated. Posterior outline of proctodeum straight, forming very obtuse angle with ventral border of tail myotomes. Melanophores spreading over tail. Length: 5.6 - 6.2 mm." [ISBN:0815318960]
+id: UBERON:8000002
+name: third instar larva stage
+namespace: uberon
+def: "The third stage of instar larva stage." [IDOMAL:0000658]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000049 ! NF stage 35 and 36
-relationship: part_of XAO:1000080 ! late tailbud stage
+synonym: "third instar larva" EXACT []
+is_a: UBERON:0004730 ! instar larval stage
+relationship: dc-contributor https://orcid.org/0000-0001-5208-3432
[Term]
-id: XAO:1000051
-name: NF stage 39
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 39, corresponding to an embryo of age 2 days, 8 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Melanophores appearing around nasal pits. Opening of stomodeal invagination transversely elongated. Melanophores on back arranged in a superficial and a deeper layer. Outlines of proctodeum and tail myotomes forming angle of about 135 degrees. Melanophores appearing along ventral edge of tail musculature. Length: 5.9 - 6.5 mm." [ISBN:0815318960]
+id: UBERON:8000003
+name: fourth instar larva stage
+namespace: uberon
+def: "The fourth stage of instar larva stage." [IDOMAL:0000659]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000050 ! NF stage 37 and 38
-relationship: part_of XAO:1000080 ! late tailbud stage
+synonym: "fourth instar larva" EXACT []
+is_a: UBERON:0004730 ! instar larval stage
+relationship: dc-contributor https://orcid.org/0000-0001-5208-3432
[Term]
-id: XAO:1000052
-name: NF stage 40
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 40, corresponding to an embryo of age 2 days, 18 hr at 22-24 Celsius and having the following external morphological criteria: Mouth broken through. Length of gills about twice their breadth, posterior one sometimes also showing a branch. Outlines of proctodeum and tail myotomes forming angles of 90 degrees. Beginning of blood circulation in gills. Length: 6.3 - 6.8 mm." [ISBN:0815318960]
+id: UBERON:8200002
+name: copepodite stage 1
+namespace: uberon
+def: "A development stage of copepods which immediately follows the nauplius stage. It is characterized by the presence of 2 swimming legs." [http://orcid.org/0000-0002-2908-3327]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000051 ! NF stage 39
-relationship: part_of XAO:1000080 ! late tailbud stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
+relationship: in_taxon NCBITaxon:6830 ! Copepoda
+relationship: part_of UBERON:0014860 ! copepodite stage
+relationship: preceded_by UBERON:0014406 ! nauplius stage
+property_value: dcterms-date "2021-07-26T14:57:48Z" xsd:dateTime
[Term]
-id: XAO:1000053
-name: NF stage 41
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 41, corresponding to an embryo of age 3 days, 4 hr at 22-24 Celsius and having the following external morphological criteria: Gills broader and flatter, more laterally directed. Formation of a left-rostral and a right-caudal furrow in yolk mass; torsion of interjacent part about 45 degrees; formation of conical proctodeum, forming angle of about 60 degrees with tail myotomes. Formation of fin rostral to proctodeum; ventral outline of yolk mass and proctodeum a smooth concave line. Length: 6.7 - 7.5 mm." [ISBN:0815318960]
+id: UBERON:8200003
+name: copepodite stage 2
+namespace: uberon
+def: "A development stage of copepods which immediately follows copepodite stage 1. It is characterized by the presence of 3 swimming legs." [http://orcid.org/0000-0002-2908-3327]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000052 ! NF stage 40
-relationship: part_of XAO:1000080 ! late tailbud stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
+relationship: in_taxon NCBITaxon:6830 ! Copepoda
+relationship: part_of UBERON:0014860 ! copepodite stage
+relationship: preceded_by UBERON:8200002 ! copepodite stage 1
+property_value: dcterms-date "2021-07-26T15:07:18Z" xsd:dateTime
[Term]
-id: XAO:1000054
-name: NF stage 42
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 42, corresponding to an embryo of age 3 days, 8 hr at 22-24 Celsius and having the following external morphological criteria: Beginning of formation of opercular folds. Torsion of intestine about 90 degrees; proctodeum connected with yolk mass by short horizontal intestinal tube. Length: 7.0 - 7.7 mm." [ISBN:0815318960]
+id: UBERON:8200004
+name: copepodite stage 3
+namespace: uberon
+def: "A development stage of copepods which immediately follows copepodite stage 2. It is characterized by the presence of 4 swimming legs." [http://orcid.org/0000-0002-2908-3327]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000053 ! NF stage 41
-relationship: part_of XAO:1000080 ! late tailbud stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
+relationship: in_taxon NCBITaxon:6830 ! Copepoda
+relationship: part_of UBERON:0014860 ! copepodite stage
+relationship: preceded_by UBERON:8200003 ! copepodite stage 2
+property_value: dcterms-date "2021-07-26T15:43:37Z" xsd:dateTime
[Term]
-id: XAO:1000055
-name: NF stage 43
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 43, corresponding to an embryo of age 3 days, 15 hr at 22-24 Celsius and having the following external morphological criteria: Lateral line system becoming visible externally. Cement gland losing its pigment. Torsion of intestine about 180 degrees; proctodeum narrower, arched or S-shaped. Length: 7.5 - 8.3 mm." [ISBN:0815318960]
+id: UBERON:8200005
+name: copepodite stage 4
+namespace: uberon
+def: "A development stage of copepods which immediately follows copepodite stage 3. It is characterized by the presence of 5 swimming legs." [http://orcid.org/0000-0002-2908-3327]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000054 ! NF stage 42
-relationship: part_of XAO:1000080 ! late tailbud stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
+relationship: in_taxon NCBITaxon:6830 ! Copepoda
+relationship: part_of UBERON:0014860 ! copepodite stage
+relationship: preceded_by UBERON:8200004 ! copepodite stage 3
+property_value: dcterms-date "2021-07-26T15:45:12Z" xsd:dateTime
[Term]
-id: XAO:1000056
-name: NF stage 44
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 44, corresponding to an embryo of age 3 days, 20 hr at 22-24 Celsius and having the following external morphological criteria: Appearance of tentacle rudiments. Opercular folds protruding further. Coiling part of intestine showing S-shaped loop; torsion about 360 degrees. Blood-circulation in gills usually ceased (gills smaller). Length: 7.8 - 8.5 mm." [ISBN:0815318960]
+id: UBERON:8200006
+name: copepodite stage 5
+namespace: uberon
+def: "A pre-adult stage of copepods which immediately follows copepodite stage 4. It is characterized by enlargement of the urosome and development of sexual organs." [http://orcid.org/0000-0002-2908-3327]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000055 ! NF stage 43
-relationship: part_of XAO:1000080 ! late tailbud stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
+relationship: in_taxon NCBITaxon:6830 ! Copepoda
+relationship: part_of UBERON:0000113 ! post-juvenile adult stage
+relationship: preceded_by UBERON:8200005 ! copepodite stage 4
+property_value: dcterms-date "2021-07-26T15:46:40Z" xsd:dateTime
[Term]
-id: XAO:1000057
-name: NF stage 45
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 45, corresponding to a tadpole of age 4 days, 2 hr at 22-24 Celsius and having the following external morphological criteria: Operculum partly covering gills, edge still straight. Intestine spiralized in ventral aspects, showing 1.5 revolutions. Beginning of feeding. Length: 8 - 10 mm." [ISBN:0815318960]
+id: UBERON:8200007
+name: copepodite stage 6
+namespace: uberon
+def: "A fully formed stage of copepods which immediately follows copepodite stage 5. It is characterized by the complete development of the fifth swimming leg." [http://orcid.org/0000-0002-2908-3327]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000056 ! NF stage 44
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+is_a: UBERON:0000105 ! life cycle stage
+relationship: dc-contributor https://orcid.org/0000-0002-2908-3327
+relationship: in_taxon NCBITaxon:6830 ! Copepoda
+relationship: part_of UBERON:0000066 ! fully formed stage
+relationship: preceded_by UBERON:8200006 ! copepodite stage 5
+property_value: dcterms-date "2021-07-26T15:48:54Z" xsd:dateTime
[Term]
-id: XAO:1000058
-name: NF stage 46
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 46, corresponding to a tadpole of age 4 days, 10 hr at 22-24 Celsius and having the following external morphological criteria: Edge of operculum becoming convex. Xantophores appearing on eye and abdomen. Intestine showing 2 to 2.5 revolutions. Hindlimb bud visible for the first time. Length: 9 - 12 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000057 ! NF stage 45
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+id: WBls:0000001
+name: free-living nematode stage
+namespace: worm_development
+def: "The nematode life-cycle stage that occurs entirely outside of a host organism." [WB:jl]
+is_a: WBls:0000101 ! Nematode life stage
+created_by: jl16
+creation_date: 2015-03-19T10:42:18Z
[Term]
-id: XAO:1000059
-name: NF stage 47
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 47, corresponding to a tadpole of age 5 days, 12 hr at 22-24 Celsius and having the following external morphological criteria: Tentacles larger. Edge of operculum forming quarter of a circle. Xantophores forming opaque layer on abdomen. Intestine showing 2.5 to 3.5 revolutions. Hindlimb bud more distinct. Length: 12 - 15 mm." [ISBN:0815318960]
+id: WBls:0000056
+name: adult male Ce (worm)
+namespace: worm_development
+def: "The stage after an male animal is fully-developed and reaches maturity." [WB:wjc]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000058 ! NF stage 46
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+synonym: "adult male" BROAD []
+is_a: UBERON:0000066 ! fully formed stage
[Term]
-id: XAO:1000060
-name: NF stage 48
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 48, corresponding to a tadpole of age 7.5 days at 22-24 Celsius and having the following external morphological criteria: Beginning of pigmentation around n. acusticus. Forelimb bud visible for the first time. Shining gold-coloured abdomen. Hindlimb bud semicircular in lateral aspect. Length: 14 - 17 mm." [ISBN:0815318960]
+id: WBls:0000057
+name: adult hermaphrodite Ce (worm)
+namespace: worm_development
+def: "The stage after an hermaphrodite animal is fully-developed and reaches maturity." [WB:wjc]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000059 ! NF stage 47
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+synonym: "adult hermaphrodite" BROAD []
+is_a: UBERON:0000066 ! fully formed stage
[Term]
-id: XAO:1000061
-name: NF stage 49
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 49, corresponding to a tadpole of age about 12 days at 22-24 Celsius and having the following external morphological criteria: Melanophores usually appearing around thymus gland and nerves and blood vessels of head; xantophores appearing on pericard. Forelimb bud distinct. Hindlimb bud somewhat longer, distal outline still circular, no constrictions at base. Melanophores appearing on dorsal and ventral fin. Length: 17 - 23 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000060 ! NF stage 48
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+id: WBls:0000075
+name: worm life stage
+namespace: worm_development
+def: "A developemental life stage of a worm" [WB:WBPerson2987]
+created_by: danielaraciti
[Term]
-id: XAO:1000062
-name: NF stage 50
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 50, corresponding to a tadpole of age about 15 days at 22-24 Celsius and having the following external morphological criteria: Forelimb bud somewhat oval-shaped in dorsal aspect. Hindlimb bud longer than broad, constricted at base, distal outline somewhat conical. Length: 20 - 27 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000061 ! NF stage 49
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+id: WBls:0000101
+name: Nematode life stage
+namespace: worm_development
+def: "Any developmental stage in a nematode, including embryo, larva and adult stage." [WB:dr, WB:jl]
+synonym: "all stages nematode" EXACT []
+synonym: "nematode developmental stage" EXACT []
+is_a: WBls:0000075 ! worm life stage
+created_by: danielaraciti
+creation_date: 2013-11-25T06:13:37Z
[Term]
-id: XAO:1000063
-name: NF stage 51
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 51, corresponding to a tadpole of age about 17 days at 22-24 Celsius and having the following external morphological criteria: Tentacles much longer. Forelimb bud oval-shaped in lateral aspect. Hindlimb bud conical in shape, its length about 1.5 times its breadth; melanophores appearing on it. Length: 28 - 36 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000062 ! NF stage 50
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+id: WBls:0000804
+name: C. elegans life stage occurring post embryogenesis
+namespace: worm_development
+def: "A C. elegans life stage that occurs after embryogenesis" [WB:WBPerson2987]
+is_a: WBls:0000825 ! C. elegans life stage
[Term]
-id: XAO:1000064
-name: NF stage 52
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 52, corresponding to a tadpole of age about 21 days at 22-24 Celsius and having the following external morphological criteria: Forelimb bud irregularly conical. Hindlimb bud showing first indication of ankle constriction and first sign of flattening of foot. Length: 42 - 56 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000063 ! NF stage 51
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+id: WBls:0000825
+name: C. elegans life stage
+namespace: worm_development
+def: "A life stage of the nematode Caenorhabditis elegans" [WB:WBPerson2987]
+is_a: WBls:0000001 ! free-living nematode stage
[Term]
-id: XAO:1000065
-name: NF stage 53
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 53, corresponding to a tadpole of age about 24 days at 22-24 Celsius and having the following external morphological criteria: Fore- and hindlimbs in paddle stage. Hindlimb whithout foot somewhat longer than broad; 4th and 5th toe indicated. Length: 50 - 60 mm." [ISBN:0815318960]
-subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000064 ! NF stage 52
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+id: WBls:0000827
+name: post dauer stage Ce (worm)
+namespace: worm_development
+def: "A C. elegans life stage that occurs after the animal has recovered from the dauer diapause. This includes the post dauer L3 (PDL3) stage, the post dauer L4 (PDL4) stage, and post dauer adult stage." [PMID:27417559, WB:WBPerson2987]
+is_a: BFO:0000003 ! occurrent
+is_a: WBls:0000804 ! C. elegans life stage occurring post embryogenesis
+relationship: part_of UBERON:0000092 ! post-embryonic stage
[Term]
-id: XAO:1000066
-name: NF stage 54
-namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 54, corresponding to a tadpole of age about 26 days at 22-24 Celsius and having the following external morphological criteria: All four fingers indicated; edge of hand slightly scalloped between fingers; melanophores appearing on forelimb. Length of hindlimb without foot nearly twice its breadth; all five toes indicated, the second only very slightly. Length: 58 - 65 mm." [ISBN:0815318960]
+id: WBls:0000829
+name: post dauer adult stage Ce (worm)
+namespace: worm_development
+def: "A C. elegans adult life stage that occurs after the animal has recovered from the dauer diapause." [PMID:27417559, WB:WBPerson2987]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000065 ! NF stage 53
-relationship: part_of XAO:1000089 ! premetamorphosis stage
+is_a: UBERON:0000066 ! fully formed stage
+is_a: WBls:0000827 ! post dauer stage Ce (worm)
[Term]
-id: XAO:1000067
-name: NF stage 55
+id: XAO:1000002
+name: early tailbud stage (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 55, corresponding to a tadpole of age about 32 days at 22-24 Celsius and having the following external morphological criteria: Hand pronated about 90 degrees; free parts of fingers about equally long as broad. Length of hindlimb without foot about 3 times its breadth; length of cartilages of 4th and 5th toe about 4 times their breadth. Length: 70 - 80 mm." [ISBN:0815318960]
+def: "Tailbud stage that refers to the earlier events associated with this stage, comprising Nieuwkoop and Faber stages 22 to 28." [Bgee:curator, ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000066 ! NF stage 54
-relationship: part_of XAO:1000090 ! prometamorphosis stage
+synonym: "early tailbud" EXACT []
+is_a: XAO:1000007 ! tailbud stage (xenopus)
[Term]
-id: XAO:1000068
-name: NF stage 56
+id: XAO:1000007
+name: tailbud stage (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 56, corresponding to a tadpole of age about 38 days at 22-24 Celsius and having the following external morphological criteria: Elbow and wrist clearly indicated; length of free parts of fingers 3 to 4 times their breadth. Length of cartilages of 4th and 5th toe about 6 times their breadth. Length: 70 - 100 mm." [ISBN:0815318960]
+def: "Embryonic stage during which neurulation is completed and tail formation begins, visible by an emerging tail primordium; comprising Nieuwkoop and Faber stages 22 to 44 (feeding), including the beginning of hatching (NF stage 35/36)." [DOI:10.1038/nrg1347, ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000067 ! NF stage 55
-relationship: part_of XAO:1000090 ! prometamorphosis stage
+xref: UBERON:0009741
+is_a: UBERON:0000068 ! embryo stage
+relationship: immediately_preceded_by UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000069
-name: NF stage 57
+id: XAO:1000015
+name: NF stage 5 (16-cell) (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 57, corresponding to a tadpole of age about 41 days at 22-24 Celsius and having the following external morphological criteria: Pigment-free spot appearing above \"Stirnorgan\". Angle of elbow more than 90 degrees; fingers stretched out in forelimb atrium, their length about 7 times their breadth. Length: 75 - 105 mm." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 5, corresponding to an embryo of age 2 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Advanced sixteen cell stage. Dorsal micromeres distinctly smaller and less pigmented than ventral ones. Macromeres entirely separated by cleavage grooves. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000068 ! NF stage 56
-relationship: part_of XAO:1000090 ! prometamorphosis stage
+synonym: "16-cell stage" EXACT []
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by UBERON:0007236 ! 8 cell stage
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: XAO:1000070
-name: NF stage 58
+id: XAO:1000016
+name: NF stage 6 (32-cell) (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 58, corresponding to a tadpole of age about 44 days at 22-24 Celsius and having the following external morphological criteria: Forelimbs broken through. Guanophores appearing on abdomen and thighs (adult skin areas). All three claws present on hindlimbs. Length: 80 - 110 mm." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 6, corresponding to an embryo of age 3 hr at 22-24 Celsius and having the following external morphological criteria: Advanced thirty-two cell stage. Distinction between dorsal and ventral micromeres as in preceding stage. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000069 ! NF stage 57
-relationship: part_of XAO:1000091 ! climax stage
+synonym: "32-cell stage" EXACT []
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000015 ! NF stage 5 (16-cell) (xenopus)
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: XAO:1000071
-name: NF stage 59
+id: XAO:1000017
+name: NF stage 7 (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 59, corresponding to a tadpole of age about 45 days at 22-24 Celsius and having the following external morphological criteria: Tentacles beginning to shrivel up. Stretched forelimb reaching down to base of hindlimb. Guanophores appearing near base of forelimb (adult skin area); anterior border of adult skin area on abdomen not yet sharp; appearance of irregular dark spots on back." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 7 (64-cell stage), corresponding to an embryo of age 4 hr at 22-24 Celsius and having the following external morphological criteria: Large-cell blastula stage. In animal view about 10 micromeres along meridian. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000070 ! NF stage 58
-relationship: part_of XAO:1000091 ! climax stage
+synonym: "64-cell stage" EXACT []
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000029 ! NF stage 6.5 (xenopus)
+relationship: part_of UBERON:0000108 ! blastula stage
[Term]
-id: XAO:1000072
-name: NF stage 60
+id: XAO:1000018
+name: NF stage 8 (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 60, corresponding to a tadpole of age about 46 days at 22-24 Celsius and having the following external morphological criteria: N. olfactorius still longer than bulbus olfactorius. Guanophores appearing on lower jaw (adult skin area). Openings of gill chambers still wide. Distal half of fingers of stretched forelimb extending beyond base of hindlimb; forelimb still situated behind level of heart. Adult skin area of base of forelimb covered with guanophores; anterior border of adult skin area on abdomen sharper, reaching up to heart." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 8 (128-cell stage), corresponding to an embryo of age 5 hr at 22-24 Celsius and having the following external morphological criteria: Medium-cell blastula stage. Surface not yet entirely smooth. Border of animal pigment cap more diffuse at dorsal than at lateral and ventral sides. Gradual transition in cell size from animal to vegetative pole. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000071 ! NF stage 59
-relationship: part_of XAO:1000091 ! climax stage
+synonym: "128-cell stage" EXACT []
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000017 ! NF stage 7 (xenopus)
+relationship: part_of UBERON:0000108 ! blastula stage
[Term]
-id: XAO:1000073
-name: NF stage 61
+id: XAO:1000019
+name: NF stage 9 (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 61, corresponding to a tadpole of age about 48 days at 22-24 Celsius and having the following external morphological criteria: Head narrower. Tentacles considerably shortened, mostly curved backwards. Length of n. olfactorius equal to diameter of bulbus olfactorius. 4th arterial arch seen just in front of adult skin area of forelimb. Openings of gill chambers considerably narrowed. Forelimb at level of posterior half of heart. Adult skin area on abdomen covering posterior half of heart. Fins considerably reduced." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 9, corresponding to an embryo of age 7 hr at 22-24 Celsius and having the following external morphological criteria: Fine-cell blastula stage. Animal cells smaller at dorsal than at ventral side. Border between marginal zone and vegetative field distinct, particularly dorsally, owing to difference in cell size. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000072 ! NF stage 60
-relationship: part_of XAO:1000091 ! climax stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000018 ! NF stage 8 (xenopus)
+relationship: part_of UBERON:0000108 ! blastula stage
[Term]
-id: XAO:1000074
-name: NF stage 62
+id: XAO:1000020
+name: NF stage 10 (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 62, corresponding to a tadpole of age about 49 days at 22-24 Celsius and having the following external morphological criteria: Head still somewhat broader than cranial part of trunk. Tentacles short, straight. N. olfactorius shorter than diameter of bulbus olfactorius. Corner of mouth still in front of eye. Thymus gland somewhat protruding. 3rd arterial arch (\"larval aorta\") seen at distance of its own diameter in front of adult skin area of forelimb. Opening of operculum reduced to curved slit. Forelimb at level of middle of heart. Anterior border of adult skin area on abdomen entirely sharp, mostly nicked medially. Ventral fin disappeared from abdomen." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 10, corresponding to an embryo of age 9 hr at 22-24 Celsius and having the following external morphological criteria: Initial gastrula stage. First indication of blastopore only by pigment concentration. No formation of groove. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000073 ! NF stage 61
-relationship: part_of XAO:1000091 ! climax stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000019 ! NF stage 9 (xenopus)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: XAO:1000075
-name: NF stage 63
+id: XAO:1000021
+name: NF stage 11 (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 63, corresponding to a tadpole of age about 51 days at 22-24 Celsius and having the following external morphological criteria: Head narrower than trunk. Tentacles mostly disappeared. Corner of mouth at level of caudal border of eye. \"Larval aorta\" and thymus gland no longer externally visible. Operculum closed. Adult skin areas on abdomen and lower jaw separated by narrow band of larval skin. Forelimb at level of anterior half of heart. Fin mostly perforated near anus. Tail still slightly longer than body." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 11, corresponding to an embryo of age 11 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Horse-shoe-shaped blastopore stage. Blastopore groove surrounding about half of future yolk plug and indicated at its ventral side; future yolk plug often rounded rectangular, slightly elongated in dorso-ventral direction, diameter more than two-fifths of diameter of egg (plus or minus 50 degrees of circumference). Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000074 ! NF stage 62
-relationship: part_of XAO:1000091 ! climax stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000031 ! NF stage 10.5 (xenopus)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: XAO:1000076
-name: NF stage 64
+id: XAO:1000022
+name: NF stage 12 (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 64, corresponding to a tadpole of age about 53 days at 22-24 Celsius and having the following external morphological criteria: Corner of mouth well behind eye. Various adult skin areas joined almost everywhere, borderlines still clearly visible. Length of tail (from anus) is a third of body length." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 12, corresponding to an embryo of age 13 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Medium yolk plug stage. Yolk plug circular; diameter somewhat less than one fourth of diameter of egg (plus or minus 25 degrees). More and less pigmented fields radiating from yolk plug. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000075 ! NF stage 63
-relationship: part_of XAO:1000091 ! climax stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000032 ! NF stage 11.5 (xenopus)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: XAO:1000077
-name: NF stage 65
+id: XAO:1000023
+name: NF stage 13 (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 65, corresponding to a tadpole of age about 54 days at 22-24 Celsius and having the following external morphological criteria: Borderlines between adult skin areas partly disappeared. Tail oblong triangular in dorsal aspect, length abouth one tenth of body length." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 13, corresponding to an embryo of age 14 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Slit-blastopore stage. Neural plate faintly delimited; slight elevation of its rostral part and slight flattening of its caudal part. Caudal part of median groove formed. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000076 ! NF stage 64
-relationship: part_of XAO:1000091 ! climax stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000033 ! NF stage 12.5 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000078
-name: NF stage 66
+id: XAO:1000024
+name: NF stage 14 (xenopus)
namespace: xenopus_developmental_stage
-def: "Nieuwkoop and Faber stage 66, corresponding to a tadpole of age about 58 days at 22-24 Celsius and having the following external morphological criteria: Border lines between adult skin areas disappeared. Tail only a very small triangle, no longer visible from ventral side." [ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 14, corresponding to an embryo of age 16 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Neural plate stage. Cerebral part of neural plate bent downwards, with median elevation at rostral end of median groove. Initial elevation of neural folds, most pronounced in future nucal region. Blastopore always slit-shaped. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000094 ! NF stage
-relationship: immediately_preceded_by XAO:1000077 ! NF stage 65
-relationship: part_of XAO:1000091 ! climax stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000023 ! NF stage 13 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000079
-name: metamorphosing tadpole stage
+id: XAO:1000025
+name: NF stage 15 (xenopus)
namespace: xenopus_developmental_stage
-def: "Tadpole stage during which toe differentiation and rapid hindlimb growth continue, followed by tail resorption; comprising Nieuwkoop and Faber stages 54 to 66." [Bgee:curator, ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 15, corresponding to an embryo of age 17 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Early neural fold stage. Presumptive cement gland faintly circumscribed. Anterior part of neural plate roundish. Neural folds distinct, except medio-rostrally; initial formation of sharp inner ridges on neural folds in rhombencephalic region. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
subset: life_stage
-synonym: "metamorphosing tadpole" EXACT []
-is_a: XAO:1000008 ! tadpole stage
-relationship: immediately_preceded_by XAO:1000089 ! premetamorphosis stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000024 ! NF stage 14 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000080
-name: late tailbud stage
+id: XAO:1000026
+name: NF stage 16 (xenopus)
namespace: xenopus_developmental_stage
-def: "Tailbud stage that refers to the later events associated with this stage, comprising Nieuwkoop and Faber stages 29/30 to 44." [Bgee:curator, ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 16, corresponding to an embryo of age 18 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Mid neural fold stage. Anterior part of neural plate rectangular; darkly pigmented eye anlagen present; neural plate sharply constricted in the middle. Inner ridges on neural folds forming angle of about 90 degrees with neural plate in rhombencephalic region. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
subset: life_stage
-synonym: "late tailbud" EXACT []
-is_a: XAO:1000007 ! tailbud stage
-relationship: immediately_preceded_by XAO:1000002 ! early tailbud stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000025 ! NF stage 15 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000081
-name: unspecified stage
+id: XAO:1000027
+name: NF stage 17 (xenopus)
namespace: xenopus_developmental_stage
-def: "Unspecified Xenopus developmental stage." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 17, corresponding to an embryo of age 18 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Late neural fold stage. Anterior part of neural plate oblong triangular, angles formed by eye anlagen. Neural folds approaching each other from blastopore up to anterior trunk region. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000000 ! Xenopus developmental stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000026 ! NF stage 16 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000082
-name: unfertilized egg stage
+id: XAO:1000028
+name: NF stage 2- (xenopus)
namespace: xenopus_developmental_stage
-def: "Any of the stages of the developing or mature Xenopus female gamete." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 2-, corresponding to an embryo of age 1 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Beginning of first cleavage. First cleavage groove has not yet reached vegetal pole. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-synonym: "unfertilized egg" EXACT []
-is_a: XAO:1000000 ! Xenopus developmental stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by UBERON:0000106 ! zygote stage
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: XAO:1000083
-name: oocyte stage I
+id: XAO:1000029
+name: NF stage 6.5 (xenopus)
namespace: xenopus_developmental_stage
-def: "The pre-vitellogenic stage of the developing female gamete." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 6.5, corresponding to an embryo of age 3 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Morula stage. About 48 blastomeres. In animal view about 6 micromeres along meridian. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000082 ! unfertilized egg stage
-created_by: lab
-creation_date: 2011-09-09T02:23:46Z
+synonym: "morula" RELATED [ISBN:0815318960]
+xref: UBERON:0000085
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000016 ! NF stage 6 (32-cell) (xenopus)
+relationship: part_of UBERON:0000107 ! cleavage stage
[Term]
-id: XAO:1000084
-name: oocyte stage II
+id: XAO:1000030
+name: NF stage 10.25 (xenopus)
namespace: xenopus_developmental_stage
-def: "The early vitellogenic stage of the developing female gamete." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 10.25, corresponding to an embryo of age 10 hr at 22-24 Celsius and having the following external morphological criteria: Early gastrula stage. First formation of dorsal blastopore groove; the groove is still straight. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000082 ! unfertilized egg stage
-relationship: immediately_preceded_by XAO:1000083 ! oocyte stage I
-created_by: lab
-creation_date: 2011-09-09T02:24:37Z
+synonym: "NF stage 10+" EXACT []
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000020 ! NF stage 10 (xenopus)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: XAO:1000085
-name: oocyte stage III
+id: XAO:1000031
+name: NF stage 10.5 (xenopus)
namespace: xenopus_developmental_stage
-def: "The mid-vitellogenic stage of the developing female gamete." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 10.5, corresponding to an embryo of age 11 hr at 22-24 Celsius and having the following external morphological criteria: Crescent-shaped blastopore stage. Blastopore groove angular. Vegetal field slightly decreased in size, ventral border of future yolk plug indicated by pigment contraction. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000082 ! unfertilized egg stage
-relationship: immediately_preceded_by XAO:1000084 ! oocyte stage II
-created_by: lab
-creation_date: 2011-09-09T02:24:56Z
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000030 ! NF stage 10.25 (xenopus)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: XAO:1000086
-name: oocyte stage IV
+id: XAO:1000032
+name: NF stage 11.5 (xenopus)
namespace: xenopus_developmental_stage
-def: "The stage of the developing female gamete that corresponds to the establishment of polarization along the animal-vegetal axis of the gamete." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 11.5, corresponding to an embryo of age 12 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Large yolk plug stage. Blastopore groove closed ventrally; yolk plug not yet quite circular. At ventral side concentrated superficial pigment still visible. Diameter of yolk plug about a third of diameter of egg (plus or minus 40 degrees). Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000082 ! unfertilized egg stage
-relationship: immediately_preceded_by XAO:1000085 ! oocyte stage III
-created_by: lab
-creation_date: 2011-09-09T02:25:13Z
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000021 ! NF stage 11 (xenopus)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: XAO:1000087
-name: oocyte stage V
+id: XAO:1000033
+name: NF stage 12.5 (xenopus)
namespace: xenopus_developmental_stage
-def: "The late-vitellogenic stage of the developing female gamete." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 12.5, corresponding to an embryo of age 14 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Small yolk plug stage. Future position of neural plate and median groove indicated by darker pigment lines. Yolk plug usually ovoid, variable in size. Length: 1.4 - 1.5 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000082 ! unfertilized egg stage
-relationship: immediately_preceded_by XAO:1000086 ! oocyte stage IV
-created_by: lab
-creation_date: 2011-09-09T02:25:43Z
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000022 ! NF stage 12 (xenopus)
+relationship: part_of UBERON:0000109 ! gastrula stage
[Term]
-id: XAO:1000088
-name: oocyte stage VI
+id: XAO:1000034
+name: NF stage 18 (xenopus)
namespace: xenopus_developmental_stage
-def: "The developmental stage of the female gamete at which the gamete is fully grown." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 18, corresponding to an embryo of age 19 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Neural groove stage. Anterior part of neural plate narrow, more or less club-shaped, often narrower towards rostral end. Parallel neural folds in trunk region very close to each other, not yet touching. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
subset: life_stage
-is_a: XAO:1000082 ! unfertilized egg stage
-relationship: immediately_preceded_by XAO:1000087 ! oocyte stage V
-created_by: lab
-creation_date: 2011-09-09T02:26:43Z
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000027 ! NF stage 17 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000089
-name: premetamorphosis stage
+id: XAO:1000035
+name: NF stage 19 (xenopus)
namespace: xenopus_developmental_stage
-def: "Tadpole stage during which limb bud growth occurs, comprising Nieuwkoop and Faber stages 45 to 54." [ISBN:0124554032]
+def: "Nieuwkoop and Faber stage 19, corresponding to an embryo of age 20 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Initial neural tube stage. Neural folds touching each other, except for inconstant openings at anterior and posterior end and behind nucal region. Considerable lateral extension of brain. Lateral outline of embryo still convex. Length: 1.5 - 1.6 mm." [ISBN:0815318960]
subset: life_stage
-synonym: "premetamorphosis" EXACT []
-is_a: XAO:1000008 ! tadpole stage
-relationship: immediately_preceded_by XAO:1000080 ! late tailbud stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000034 ! NF stage 18 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000090
-name: prometamorphosis stage
+id: XAO:1000036
+name: NF stage 20 (xenopus)
namespace: xenopus_developmental_stage
-def: "Metamorphosing tadpole stage during which toe differentiation and rapid hindlimb growth continue, comprising Nieuwkoop and Faber stages 55 to 57." [ISBN:0124554032]
+def: "Nieuwkoop and Faber stage 20, corresponding to an embryo of age 21 hr 45 min at 22-24 Celsius and having the following external morphological criteria: Neural folds fused, suture still present. The two eye anlagen showing through dumb-bell-shaped, eyes hardly protruding. Beginning of stretching of embryos. Lateral outline flat. Length: 1.7 - 1.8 mm." [ISBN:0815318960]
subset: life_stage
-synonym: "prometamorphosis" EXACT []
-is_a: XAO:1000079 ! metamorphosing tadpole stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000035 ! NF stage 19 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000091
-name: climax stage
+id: XAO:1000037
+name: NF stage 21 (xenopus)
namespace: xenopus_developmental_stage
-def: "Metamorphosing tadpole stage during which tail resorption occurs, comprising Nieuwkoop and Faber stages 58 to 66." [ISBN:0124554032]
+def: "Nieuwkoop and Faber stage 21, corresponding to an embryo of age 22 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Suture of neural tube completely closed. Delimitation of frontal field by pigment lines. Primary eye vesicles showing through in the form of two separate, obliquely placed oval spots; beginning of protrusion of eyes. Lateral outline of embryo just becoming concave, ventral outline flat. Length: 1.9 - 2.0 mm." [ISBN:0815318960]
subset: life_stage
-synonym: "climax" EXACT []
-is_a: XAO:1000079 ! metamorphosing tadpole stage
-relationship: immediately_preceded_by XAO:1000090 ! prometamorphosis stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000036 ! NF stage 20 (xenopus)
+relationship: part_of UBERON:0000110 ! neurula stage
[Term]
-id: XAO:1000092
-name: mature egg stage
+id: XAO:1000038
+name: NF stage 22 (xenopus)
namespace: xenopus_developmental_stage
-def: "The developmental stage of the female gamete at which the gamete has reached maturity." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 22, corresponding to an embryo of age 24 hr at 22-24 Celsius and having the following external morphological criteria: Distinct protrusion of eyes. Initial groove between jaw- and gill-areas only at latero-dorsal side. Lateral and ventral outlines of embryo slightly concave. Anal opening displaced to ventral side. Vitelline membrane becoming wider. Length: 2.0 - 2.2 mm." [ISBN:0815318960]
subset: life_stage
-synonym: "mature egg" RELATED []
-is_a: XAO:1000082 ! unfertilized egg stage
-relationship: immediately_preceded_by XAO:1000088 ! oocyte stage VI
-created_by: lab
-creation_date: 2011-09-09T02:32:08Z
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000037 ! NF stage 21 (xenopus)
+relationship: part_of XAO:1000002 ! early tailbud stage (xenopus)
[Term]
-id: XAO:1000093
-name: adult frog stage
+id: XAO:1000039
+name: NF stage 23 (xenopus)
namespace: xenopus_developmental_stage
-def: "Xenopus developmental stage that corresponds to a fully formed, mature animal." [https://orcid.org/0000-0002-9611-1279]
-subset: life_stage
-synonym: "adult frog" EXACT []
-is_a: UBERON:0000113 ! post-juvenile adult stage
-is_a: XAO:1000095 ! post-embryonic stage
-intersection_of: UBERON:0000113 ! post-juvenile adult stage
-intersection_of: BFO:0000066 NCBITaxon:8353 ! occurs in Xenopus
-relationship: immediately_preceded_by XAO:1000010 ! juvenile frog stage
-property_value: IAO:0000589 "post-juvenile adult stage (xenopus)" xsd:string
-created_by: lab
-creation_date: 2011-09-19T01:53:23Z
+def: "Nieuwkoop and Faber stage 23, corresponding to an embryo of age 1 day, 45 min at 22-24 Celsius and having the following external morphological criteria: Jaw- and gill-areas completely separated by groove. Ventral outline of embryo more concave. Length: 2.2 - 2.4 mm." [ISBN:0815318960]
+subset: life_stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000038 ! NF stage 22 (xenopus)
+relationship: part_of XAO:1000002 ! early tailbud stage (xenopus)
[Term]
-id: XAO:1000094
-name: NF stage
+id: XAO:1000040
+name: NF stage 24 (xenopus)
namespace: xenopus_developmental_stage
-def: "Xenopus developmental stage that is one of the 66 standard chronological embryonic and tadpole stages originally described by Nieuwkoop and Faber in the Normal Table of Xenopus laevis (Daudin)." [https://orcid.org/0000-0002-9611-1279, ISBN:0815318960]
+def: "Nieuwkoop and Faber stage 24, corresponding to an embryo of age 1 day, 2 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Eyes protruding less far laterally than gill-area. Gill-area more prominent than jaw-area, gill-area not yet grooved. Ventral outline of embryo nicked. Tail bud discernible. Initial motor reactions to external stimulation. Length: 2.5 - 2.7 mm." [ISBN:0815318960]
subset: life_stage
-synonym: "Nieuwkoop and Faber stage" EXACT []
-synonym: "Nieuwkoop-Faber stage" EXACT []
-is_a: XAO:1000000 ! Xenopus developmental stage
-created_by: eriksegerdell
-creation_date: 2013-02-09T18:40:27Z
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000039 ! NF stage 23 (xenopus)
+relationship: part_of XAO:1000002 ! early tailbud stage (xenopus)
[Term]
-id: XAO:1000095
-name: post-embryonic stage
+id: XAO:1000041
+name: NF stage 25 (xenopus)
namespace: xenopus_developmental_stage
-def: "Xenopus developmental stage that succeeds the embryonic stage." [https://orcid.org/0000-0002-9611-1279]
+def: "Nieuwkoop and Faber stage 25, corresponding to an embryo of age 1 day, 3 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Eyes protruding equally far or further laterally than gill-area. Gill-area grooved. Invagination of otic vesicle indicated by pigment spot. Beginning of fin formation. Length: 2.8 - 3.0 mm." [ISBN:0815318960]
subset: life_stage
-xref: UBERON:0000092
-is_a: XAO:1000000 ! Xenopus developmental stage
-relationship: immediately_preceded_by XAO:1000012 ! embryonic stage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000040 ! NF stage 24 (xenopus)
+relationship: part_of XAO:1000002 ! early tailbud stage (xenopus)
[Term]
-id: ZFS:0000000
-name: Unknown
-namespace: zebrafish_stages
+id: XAO:1000042
+name: NF stage 26 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 26, corresponding to an embryo of age 1 day, 5 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Otic vesicle protruding. Pronephros distinctly visible. Myotomes showing through for the first time. Fin somewhat broadened at dorso-caudal end of body. Beginning of spontaneous movements. Length: 3.0 - 3.3 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-050211-1
-xref: ZFS:0100000
-is_a: UBERON:0000105 ! life cycle stage
-intersection_of: UBERON:0000105 ! life cycle stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-property_value: IAO:0000589 "life cycle stage (ZFS)" xsd:string
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000041 ! NF stage 25 (xenopus)
+relationship: part_of XAO:1000002 ! early tailbud stage (xenopus)
[Term]
-id: ZFS:0000001
-name: Zygote:1-cell
-namespace: zebrafish_stages
+id: XAO:1000043
+name: NF stage 27 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 27, corresponding to an embryo of age 1 day, 7 hr 15 min at 22-24 Celsius and having the following external morphological criteria: Lateral flattening of eyes. Fin transluscent, except for region behind anus. Tail bud formation accentuated in lateral outline. Length: 3.4 - 3.7 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-4
-is_a: UBERON:0000106 ! zygote stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0000106 ! zygote stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-property_value: IAO:0000589 "zygote stage (ZFS)" xsd:string
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000042 ! NF stage 26 (xenopus)
+relationship: part_of XAO:1000002 ! early tailbud stage (xenopus)
[Term]
-id: ZFS:0000002
-name: Cleavage:2-cell
-namespace: zebrafish_stages
+id: XAO:1000044
+name: NF stage 28 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 28, corresponding to an embryo of age 1 day, 8 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Fin extending up to anus. Fin broadened and distinctly divided into outer transparent and inner translucent band. Length: 3.8 - 4.0 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-15
-is_a: UBERON:0007232 ! 2 cell stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0007232 ! 2 cell stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0000001 ! Zygote:1-cell
-relationship: part_of ZFS:0000046 ! cleavage
-property_value: IAO:0000589 "2 cell stage (ZFS)" xsd:string
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000043 ! NF stage 27 (xenopus)
+relationship: part_of XAO:1000002 ! early tailbud stage (xenopus)
[Term]
-id: ZFS:0000003
-name: Cleavage:4-cell
-namespace: zebrafish_stages
+id: XAO:1000045
+name: NF stage 29 and 30 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 29/30, corresponding to an embryo of age 1 day, 11 hr at 22-24 Celsius and having the following external morphological criteria: Gray eye cup showing through for the first time. Fin transparent up to the base over its whole length. Tail bud distinct. Length: 4.0 - 4.5 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-11
-is_a: UBERON:0007233 ! 4 cell stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0007233 ! 4 cell stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0000002 ! Cleavage:2-cell
-relationship: part_of ZFS:0000046 ! cleavage
-property_value: IAO:0000589 "4 cell stage (ZFS)" xsd:string
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000044 ! NF stage 28 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000004
-name: Cleavage:8-cell
-namespace: zebrafish_stages
+id: XAO:1000046
+name: NF stage 31 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 31, corresponding to an embryo of age 1 day, 13 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Tail bud equally long as broad. Length: 4.2 - 4.8 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-33
-is_a: UBERON:0007236 ! 8 cell stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0007236 ! 8 cell stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0000003 ! Cleavage:4-cell
-relationship: part_of ZFS:0000046 ! cleavage
-property_value: IAO:0000589 "8 cell stage (ZFS)" xsd:string
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000045 ! NF stage 29 and 30 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000005
-name: Cleavage:16-cell
-namespace: zebrafish_stages
+id: XAO:1000047
+name: NF stage 32 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 32, corresponding to an embryo of age 1 day, 16 hr at 22-24 Celsius and having the following external morphological criteria: Eye cup horse-shoe-shaped, standing out distinctly. Length of tail bud about 1.5 times its breadth. Length: 4.5 - 5.1 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-20
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000004 ! Cleavage:8-cell
-relationship: part_of ZFS:0000046 ! cleavage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000046 ! NF stage 31 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000006
-name: Cleavage:32-cell
-namespace: zebrafish_stages
+id: XAO:1000048
+name: NF stage 33 and 34 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 33/34, corresponding to an embryo of age 1 day, 20 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Stomodeal invagination a shallow vertical groove. Dorsal part of eye more pigmented than ventral part; distinct melanophores in dorsal part. Melanophores appearing dorsally on the head and laterally in a row extending from just below the pronephros backwards. Length of tail bud about twice its breadth. Beginning of heart beat. Length: 4.7 - 5.3 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-25
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000005 ! Cleavage:16-cell
-relationship: part_of ZFS:0000046 ! cleavage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000047 ! NF stage 32 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000007
-name: Cleavage:64-cell
-namespace: zebrafish_stages
+id: XAO:1000049
+name: NF stage 35 and 36 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 35/36, corresponding to an embryo of age 2 days, 2 hr at 22-24 Celsius and having the following external morphological criteria: Stomodeal invagination roundish. Eye entirely black, choroid fissure nearly closed. Formation of two gill rudiments, anterior one nipple-shaped. Melanophores appearing on back. Posterior outline of proctodeum still curved. Length of tail bud about three times its breadth. Beginning of hatching. Length: 5.3 - 6.0 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-28
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000006 ! Cleavage:32-cell
-relationship: part_of ZFS:0000046 ! cleavage
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000048 ! NF stage 33 and 34 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000008
-name: Blastula:128-cell
-namespace: zebrafish_stages
+id: XAO:1000050
+name: NF stage 37 and 38 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 37/38, corresponding to an embryo of age 2 days, 5 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Stomodeal invagination much deeper, opening round. Both gill rudiments nipple-shaped, a branch of the anterior one indicated. Posterior outline of proctodeum straight, forming very obtuse angle with ventral border of tail myotomes. Melanophores spreading over tail. Length: 5.6 - 6.2 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-7
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000007 ! Cleavage:64-cell
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000049 ! NF stage 35 and 36 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000009
-name: Blastula:256-cell
-namespace: zebrafish_stages
+id: XAO:1000051
+name: NF stage 39 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 39, corresponding to an embryo of age 2 days, 8 hr 30 min at 22-24 Celsius and having the following external morphological criteria: Melanophores appearing around nasal pits. Opening of stomodeal invagination transversely elongated. Melanophores on back arranged in a superficial and a deeper layer. Outlines of proctodeum and tail myotomes forming angle of about 135 degrees. Melanophores appearing along ventral edge of tail musculature. Length: 5.9 - 6.5 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-1
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000008 ! Blastula:128-cell
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000050 ! NF stage 37 and 38 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000010
-name: Blastula:512-cell
-namespace: zebrafish_stages
+id: XAO:1000052
+name: NF stage 40 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 40, corresponding to an embryo of age 2 days, 18 hr at 22-24 Celsius and having the following external morphological criteria: Mouth broken through. Length of gills about twice their breadth, posterior one sometimes also showing a branch. Outlines of proctodeum and tail myotomes forming angles of 90 degrees. Beginning of blood circulation in gills. Length: 6.3 - 6.8 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-14
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000009 ! Blastula:256-cell
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000051 ! NF stage 39 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000011
-name: Blastula:1k-cell
-namespace: zebrafish_stages
+id: XAO:1000053
+name: NF stage 41 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 41, corresponding to an embryo of age 3 days, 4 hr at 22-24 Celsius and having the following external morphological criteria: Gills broader and flatter, more laterally directed. Formation of a left-rostral and a right-caudal furrow in yolk mass; torsion of interjacent part about 45 degrees; formation of conical proctodeum, forming angle of about 60 degrees with tail myotomes. Formation of fin rostral to proctodeum; ventral outline of yolk mass and proctodeum a smooth concave line. Length: 6.7 - 7.5 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-22
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000010 ! Blastula:512-cell
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000052 ! NF stage 40 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000012
-name: Blastula:High
-namespace: zebrafish_stages
+id: XAO:1000054
+name: NF stage 42 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 42, corresponding to an embryo of age 3 days, 8 hr at 22-24 Celsius and having the following external morphological criteria: Beginning of formation of opercular folds. Torsion of intestine about 90 degrees; proctodeum connected with yolk mass by short horizontal intestinal tube. Length: 7.0 - 7.7 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-27
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000011 ! Blastula:1k-cell
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000053 ! NF stage 41 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000013
-name: Blastula:Oblong
-namespace: zebrafish_stages
+id: XAO:1000055
+name: NF stage 43 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 43, corresponding to an embryo of age 3 days, 15 hr at 22-24 Celsius and having the following external morphological criteria: Lateral line system becoming visible externally. Cement gland losing its pigment. Torsion of intestine about 180 degrees; proctodeum narrower, arched or S-shaped. Length: 7.5 - 8.3 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-24
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000012 ! Blastula:High
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000054 ! NF stage 42 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000014
-name: Blastula:Sphere
-namespace: zebrafish_stages
+id: XAO:1000056
+name: NF stage 44 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 44, corresponding to an embryo of age 3 days, 20 hr at 22-24 Celsius and having the following external morphological criteria: Appearance of tentacle rudiments. Opercular folds protruding further. Coiling part of intestine showing S-shaped loop; torsion about 360 degrees. Blood-circulation in gills usually ceased (gills smaller). Length: 7.8 - 8.5 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-21
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000013 ! Blastula:Oblong
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000055 ! NF stage 43 (xenopus)
+relationship: part_of XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000015
-name: Blastula:Dome
-namespace: zebrafish_stages
+id: XAO:1000057
+name: NF stage 45 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 45, corresponding to a tadpole of age 4 days, 2 hr at 22-24 Celsius and having the following external morphological criteria: Operculum partly covering gills, edge still straight. Intestine spiralized in ventral aspects, showing 1.5 revolutions. Beginning of feeding. Length: 8 - 10 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-19
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000014 ! Blastula:Sphere
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000056 ! NF stage 44 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000016
-name: Blastula:30%-epiboly
-namespace: zebrafish_stages
+id: XAO:1000058
+name: NF stage 46 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 46, corresponding to a tadpole of age 4 days, 10 hr at 22-24 Celsius and having the following external morphological criteria: Edge of operculum becoming convex. Xantophores appearing on eye and abdomen. Intestine showing 2 to 2.5 revolutions. Hindlimb bud visible for the first time. Length: 9 - 12 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-17
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000015 ! Blastula:Dome
-relationship: part_of ZFS:0000045 ! blastula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000057 ! NF stage 45 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000017
-name: Gastrula:50%-epiboly
-namespace: zebrafish_stages
+id: XAO:1000059
+name: NF stage 47 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 47, corresponding to a tadpole of age 5 days, 12 hr at 22-24 Celsius and having the following external morphological criteria: Tentacles larger. Edge of operculum forming quarter of a circle. Xantophores forming opaque layer on abdomen. Intestine showing 2.5 to 3.5 revolutions. Hindlimb bud more distinct. Length: 12 - 15 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-6
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000016 ! Blastula:30%-epiboly
-relationship: part_of ZFS:0000047 ! gastrula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000058 ! NF stage 46 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000018
-name: Gastrula:Germ-ring
-namespace: zebrafish_stages
+id: XAO:1000060
+name: NF stage 48 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 48, corresponding to a tadpole of age 7.5 days at 22-24 Celsius and having the following external morphological criteria: Beginning of pigmentation around n. acusticus. Forelimb bud visible for the first time. Shining gold-coloured abdomen. Hindlimb bud semicircular in lateral aspect. Length: 14 - 17 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-3
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000017 ! Gastrula:50%-epiboly
-relationship: part_of ZFS:0000047 ! gastrula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000059 ! NF stage 47 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000019
-name: Gastrula:Shield
-namespace: zebrafish_stages
+id: XAO:1000061
+name: NF stage 49 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 49, corresponding to a tadpole of age about 12 days at 22-24 Celsius and having the following external morphological criteria: Melanophores usually appearing around thymus gland and nerves and blood vessels of head; xantophores appearing on pericard. Forelimb bud distinct. Hindlimb bud somewhat longer, distal outline still circular, no constrictions at base. Melanophores appearing on dorsal and ventral fin. Length: 17 - 23 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-2
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000018 ! Gastrula:Germ-ring
-relationship: part_of ZFS:0000047 ! gastrula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000060 ! NF stage 48 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000020
-name: Gastrula:75%-epiboly
-namespace: zebrafish_stages
+id: XAO:1000062
+name: NF stage 50 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 50, corresponding to a tadpole of age about 15 days at 22-24 Celsius and having the following external morphological criteria: Forelimb bud somewhat oval-shaped in dorsal aspect. Hindlimb bud longer than broad, constricted at base, distal outline somewhat conical. Length: 20 - 27 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-18
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000019 ! Gastrula:Shield
-relationship: part_of ZFS:0000047 ! gastrula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000061 ! NF stage 49 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000021
-name: Gastrula:90%-epiboly
-namespace: zebrafish_stages
+id: XAO:1000063
+name: NF stage 51 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 51, corresponding to a tadpole of age about 17 days at 22-24 Celsius and having the following external morphological criteria: Tentacles much longer. Forelimb bud oval-shaped in lateral aspect. Hindlimb bud conical in shape, its length about 1.5 times its breadth; melanophores appearing on it. Length: 28 - 36 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-29
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000020 ! Gastrula:75%-epiboly
-relationship: part_of ZFS:0000047 ! gastrula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000062 ! NF stage 50 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000022
-name: Gastrula:Bud
-namespace: zebrafish_stages
+id: XAO:1000064
+name: NF stage 52 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 52, corresponding to a tadpole of age about 21 days at 22-24 Celsius and having the following external morphological criteria: Forelimb bud irregularly conical. Hindlimb bud showing first indication of ankle constriction and first sign of flattening of foot. Length: 42 - 56 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-12
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000021 ! Gastrula:90%-epiboly
-relationship: part_of ZFS:0000047 ! gastrula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000063 ! NF stage 51 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000023
-name: Segmentation:1-4 somites
-namespace: zebrafish_stages
+id: XAO:1000065
+name: NF stage 53 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 53, corresponding to a tadpole of age about 24 days at 22-24 Celsius and having the following external morphological criteria: Fore- and hindlimbs in paddle stage. Hindlimb whithout foot somewhat longer than broad; 4th and 5th toe indicated. Length: 50 - 60 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-23
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000022 ! Gastrula:Bud
-relationship: part_of ZFS:0000049 ! segmentation
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000064 ! NF stage 52 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000024
-name: Segmentation:5-9 somites
-namespace: zebrafish_stages
+id: XAO:1000066
+name: NF stage 54 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 54, corresponding to a tadpole of age about 26 days at 22-24 Celsius and having the following external morphological criteria: All four fingers indicated; edge of hand slightly scalloped between fingers; melanophores appearing on forelimb. Length of hindlimb without foot nearly twice its breadth; all five toes indicated, the second only very slightly. Length: 58 - 65 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-5
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000023 ! Segmentation:1-4 somites
-relationship: part_of ZFS:0000049 ! segmentation
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000065 ! NF stage 53 (xenopus)
+relationship: part_of XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000025
-name: Segmentation:10-13 somites
-namespace: zebrafish_stages
+id: XAO:1000067
+name: NF stage 55 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 55, corresponding to a tadpole of age about 32 days at 22-24 Celsius and having the following external morphological criteria: Hand pronated about 90 degrees; free parts of fingers about equally long as broad. Length of hindlimb without foot about 3 times its breadth; length of cartilages of 4th and 5th toe about 4 times their breadth. Length: 70 - 80 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-020626-1
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000024 ! Segmentation:5-9 somites
-relationship: part_of ZFS:0000049 ! segmentation
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000066 ! NF stage 54 (xenopus)
+relationship: part_of XAO:1000090 ! prometamorphosis stage (xenopus)
[Term]
-id: ZFS:0000026
-name: Segmentation:14-19 somites
-namespace: zebrafish_stages
+id: XAO:1000068
+name: NF stage 56 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 56, corresponding to a tadpole of age about 38 days at 22-24 Celsius and having the following external morphological criteria: Elbow and wrist clearly indicated; length of free parts of fingers 3 to 4 times their breadth. Length of cartilages of 4th and 5th toe about 6 times their breadth. Length: 70 - 100 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-30
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000025 ! Segmentation:10-13 somites
-relationship: part_of ZFS:0000049 ! segmentation
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000067 ! NF stage 55 (xenopus)
+relationship: part_of XAO:1000090 ! prometamorphosis stage (xenopus)
[Term]
-id: ZFS:0000027
-name: Segmentation:20-25 somites
-namespace: zebrafish_stages
+id: XAO:1000069
+name: NF stage 57 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 57, corresponding to a tadpole of age about 41 days at 22-24 Celsius and having the following external morphological criteria: Pigment-free spot appearing above \"Stirnorgan\". Angle of elbow more than 90 degrees; fingers stretched out in forelimb atrium, their length about 7 times their breadth. Length: 75 - 105 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-16
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000026 ! Segmentation:14-19 somites
-relationship: part_of ZFS:0000049 ! segmentation
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000068 ! NF stage 56 (xenopus)
+relationship: part_of XAO:1000090 ! prometamorphosis stage (xenopus)
[Term]
-id: ZFS:0000028
-name: Segmentation:26+ somites
-namespace: zebrafish_stages
+id: XAO:1000070
+name: NF stage 58 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 58, corresponding to a tadpole of age about 44 days at 22-24 Celsius and having the following external morphological criteria: Forelimbs broken through. Guanophores appearing on abdomen and thighs (adult skin areas). All three claws present on hindlimbs. Length: 80 - 110 mm." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-34
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000027 ! Segmentation:20-25 somites
-relationship: part_of ZFS:0000049 ! segmentation
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000069 ! NF stage 57 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000029
-name: Pharyngula:Prim-5
-namespace: zebrafish_stages
+id: XAO:1000071
+name: NF stage 59 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 59, corresponding to a tadpole of age about 45 days at 22-24 Celsius and having the following external morphological criteria: Tentacles beginning to shrivel up. Stretched forelimb reaching down to base of hindlimb. Guanophores appearing near base of forelimb (adult skin area); anterior border of adult skin area on abdomen not yet sharp; appearance of irregular dark spots on back." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-10
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000028 ! Segmentation:26+ somites
-relationship: part_of ZFS:0000050 ! pharyngula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000070 ! NF stage 58 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000030
-name: Pharyngula:Prim-15
-namespace: zebrafish_stages
+id: XAO:1000072
+name: NF stage 60 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 60, corresponding to a tadpole of age about 46 days at 22-24 Celsius and having the following external morphological criteria: N. olfactorius still longer than bulbus olfactorius. Guanophores appearing on lower jaw (adult skin area). Openings of gill chambers still wide. Distal half of fingers of stretched forelimb extending beyond base of hindlimb; forelimb still situated behind level of heart. Adult skin area of base of forelimb covered with guanophores; anterior border of adult skin area on abdomen sharper, reaching up to heart." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-32
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000029 ! Pharyngula:Prim-5
-relationship: part_of ZFS:0000050 ! pharyngula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000071 ! NF stage 59 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000031
-name: Pharyngula:Prim-25
-namespace: zebrafish_stages
+id: XAO:1000073
+name: NF stage 61 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 61, corresponding to a tadpole of age about 48 days at 22-24 Celsius and having the following external morphological criteria: Head narrower. Tentacles considerably shortened, mostly curved backwards. Length of n. olfactorius equal to diameter of bulbus olfactorius. 4th arterial arch seen just in front of adult skin area of forelimb. Openings of gill chambers considerably narrowed. Forelimb at level of posterior half of heart. Adult skin area on abdomen covering posterior half of heart. Fins considerably reduced." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-13
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000030 ! Pharyngula:Prim-15
-relationship: part_of ZFS:0000050 ! pharyngula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000072 ! NF stage 60 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000032
-name: Pharyngula:High-pec
-namespace: zebrafish_stages
+id: XAO:1000074
+name: NF stage 62 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 62, corresponding to a tadpole of age about 49 days at 22-24 Celsius and having the following external morphological criteria: Head still somewhat broader than cranial part of trunk. Tentacles short, straight. N. olfactorius shorter than diameter of bulbus olfactorius. Corner of mouth still in front of eye. Thymus gland somewhat protruding. 3rd arterial arch (\"larval aorta\") seen at distance of its own diameter in front of adult skin area of forelimb. Opening of operculum reduced to curved slit. Forelimb at level of middle of heart. Anterior border of adult skin area on abdomen entirely sharp, mostly nicked medially. Ventral fin disappeared from abdomen." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-31
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000031 ! Pharyngula:Prim-25
-relationship: part_of ZFS:0000050 ! pharyngula
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000073 ! NF stage 61 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000033
-name: Hatching:Long-pec
-namespace: zebrafish_stages
+id: XAO:1000075
+name: NF stage 63 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 63, corresponding to a tadpole of age about 51 days at 22-24 Celsius and having the following external morphological criteria: Head narrower than trunk. Tentacles mostly disappeared. Corner of mouth at level of caudal border of eye. \"Larval aorta\" and thymus gland no longer externally visible. Operculum closed. Adult skin areas on abdomen and lower jaw separated by narrow band of larval skin. Forelimb at level of anterior half of heart. Fin mostly perforated near anus. Tail still slightly longer than body." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-9
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000032 ! Pharyngula:High-pec
-relationship: part_of ZFS:0007000 ! hatching
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000074 ! NF stage 62 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000034
-name: Hatching:Pec-fin
-namespace: zebrafish_stages
+id: XAO:1000076
+name: NF stage 64 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 64, corresponding to a tadpole of age about 53 days at 22-24 Celsius and having the following external morphological criteria: Corner of mouth well behind eye. Various adult skin areas joined almost everywhere, borderlines still clearly visible. Length of tail (from anus) is a third of body length." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-26
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000033 ! Hatching:Long-pec
-relationship: part_of ZFS:0007000 ! hatching
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000075 ! NF stage 63 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000035
-name: Larval:Protruding-mouth
-namespace: zebrafish_stages
+id: XAO:1000077
+name: NF stage 65 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 65, corresponding to a tadpole of age about 54 days at 22-24 Celsius and having the following external morphological criteria: Borderlines between adult skin areas partly disappeared. Tail oblong triangular in dorsal aspect, length abouth one tenth of body length." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-8
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000034 ! Hatching:Pec-fin
-relationship: part_of ZFS:0000048 ! larva
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000076 ! NF stage 64 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000036
-name: Larval:Day 4
-namespace: zebrafish_stages
+id: XAO:1000078
+name: NF stage 66 (xenopus)
+namespace: xenopus_developmental_stage
+def: "Nieuwkoop and Faber stage 66, corresponding to a tadpole of age about 58 days at 22-24 Celsius and having the following external morphological criteria: Border lines between adult skin areas disappeared. Tail only a very small triangle, no longer visible from ventral side." [ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-35
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000035 ! Larval:Protruding-mouth
-relationship: part_of ZFS:0000048 ! larva
+is_a: XAO:1000094 ! NF stage (xenopus)
+relationship: immediately_preceded_by XAO:1000077 ! NF stage 65 (xenopus)
+relationship: part_of XAO:1000091 ! climax stage (xenopus)
[Term]
-id: ZFS:0000037
-name: Larval:Day 5
-namespace: zebrafish_stages
+id: XAO:1000079
+name: metamorphosing tadpole stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Tadpole stage during which toe differentiation and rapid hindlimb growth continue, followed by tail resorption; comprising Nieuwkoop and Faber stages 54 to 66." [Bgee:curator, ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-36
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000036 ! Larval:Day 4
-relationship: part_of ZFS:0000048 ! larva
+synonym: "metamorphosing tadpole" EXACT []
+is_a: UBERON:0009849 ! tadpole stage
+relationship: immediately_preceded_by XAO:1000089 ! premetamorphosis stage (xenopus)
[Term]
-id: ZFS:0000038
-name: Larval:Day 6
-namespace: zebrafish_stages
+id: XAO:1000080
+name: late tailbud stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Tailbud stage that refers to the later events associated with this stage, comprising Nieuwkoop and Faber stages 29/30 to 44." [Bgee:curator, ISBN:0815318960]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-37
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000037 ! Larval:Day 5
-relationship: part_of ZFS:0000048 ! larva
+synonym: "late tailbud" EXACT []
+is_a: XAO:1000007 ! tailbud stage (xenopus)
+relationship: immediately_preceded_by XAO:1000002 ! early tailbud stage (xenopus)
[Term]
-id: ZFS:0000039
-name: Larval:Days 7-13
-namespace: zebrafish_stages
+id: XAO:1000081
+name: unspecified stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Unspecified Xenopus developmental stage." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-47
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000038 ! Larval:Day 6
-relationship: part_of ZFS:0000048 ! larva
+is_a: UBERON:0000105 ! life cycle stage
[Term]
-id: ZFS:0000040
-name: Larval:Days 14-20
-namespace: zebrafish_stages
+id: XAO:1000082
+name: unfertilized egg stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Any of the stages of the developing or mature Xenopus female gamete." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-48
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000039 ! Larval:Days 7-13
-relationship: part_of ZFS:0000048 ! larva
+synonym: "unfertilized egg" EXACT []
+is_a: UBERON:0000105 ! life cycle stage
[Term]
-id: ZFS:0000041
-name: Larval:Days 21-29
-namespace: zebrafish_stages
+id: XAO:1000083
+name: oocyte stage I (xenopus)
+namespace: xenopus_developmental_stage
+def: "The pre-vitellogenic stage of the developing female gamete." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-49
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000040 ! Larval:Days 14-20
-relationship: part_of ZFS:0000048 ! larva
+is_a: XAO:1000082 ! unfertilized egg stage (xenopus)
+created_by: lab
+creation_date: 2011-09-09T02:23:46Z
[Term]
-id: ZFS:0000042
-name: Juvenile:Days 30-44
-namespace: zebrafish_stages
+id: XAO:1000084
+name: oocyte stage II (xenopus)
+namespace: xenopus_developmental_stage
+def: "The early vitellogenic stage of the developing female gamete." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-51
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000041 ! Larval:Days 21-29
-relationship: part_of ZFS:0000051 ! juvenile
+is_a: XAO:1000082 ! unfertilized egg stage (xenopus)
+relationship: immediately_preceded_by XAO:1000083 ! oocyte stage I (xenopus)
+created_by: lab
+creation_date: 2011-09-09T02:24:37Z
[Term]
-id: ZFS:0000043
-name: Juvenile:Days 45-89
-namespace: zebrafish_stages
+id: XAO:1000085
+name: oocyte stage III (xenopus)
+namespace: xenopus_developmental_stage
+def: "The mid-vitellogenic stage of the developing female gamete." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-52
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000042 ! Juvenile:Days 30-44
-relationship: part_of ZFS:0000051 ! juvenile
+is_a: XAO:1000082 ! unfertilized egg stage (xenopus)
+relationship: immediately_preceded_by XAO:1000084 ! oocyte stage II (xenopus)
+created_by: lab
+creation_date: 2011-09-09T02:24:56Z
[Term]
-id: ZFS:0000044
-name: adult
-namespace: zebrafish_stages
+id: XAO:1000086
+name: oocyte stage IV (xenopus)
+namespace: xenopus_developmental_stage
+def: "The stage of the developing female gamete that corresponds to the establishment of polarization along the animal-vegetal axis of the gamete." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-xref: ZFIN:ZDB-STAGE-010723-39
-is_a: UBERON:0000113 ! post-juvenile adult stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0000113 ! post-juvenile adult stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0000043 ! Juvenile:Days 45-89
-property_value: IAO:0000589 "post-juvenile adult stage (ZFS)" xsd:string
+is_a: XAO:1000082 ! unfertilized egg stage (xenopus)
+relationship: immediately_preceded_by XAO:1000085 ! oocyte stage III (xenopus)
+created_by: lab
+creation_date: 2011-09-09T02:25:13Z
[Term]
-id: ZFS:0000045
-name: blastula
-namespace: zebrafish_stages
+id: XAO:1000087
+name: oocyte stage V (xenopus)
+namespace: xenopus_developmental_stage
+def: "The late-vitellogenic stage of the developing female gamete." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-is_a: UBERON:0000108 ! blastula stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0000108 ! blastula stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0000046 ! cleavage
-property_value: IAO:0000589 "blastula stage (ZFS)" xsd:string
+is_a: XAO:1000082 ! unfertilized egg stage (xenopus)
+relationship: immediately_preceded_by XAO:1000086 ! oocyte stage IV (xenopus)
+created_by: lab
+creation_date: 2011-09-09T02:25:43Z
[Term]
-id: ZFS:0000046
-name: cleavage
-namespace: zebrafish_stages
+id: XAO:1000088
+name: oocyte stage VI (xenopus)
+namespace: xenopus_developmental_stage
+def: "The developmental stage of the female gamete at which the gamete is fully grown." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-is_a: UBERON:0000107 ! cleavage stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0000107 ! cleavage stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-property_value: IAO:0000589 "cleavage stage (ZFS)" xsd:string
+is_a: XAO:1000082 ! unfertilized egg stage (xenopus)
+relationship: immediately_preceded_by XAO:1000087 ! oocyte stage V (xenopus)
+created_by: lab
+creation_date: 2011-09-09T02:26:43Z
[Term]
-id: ZFS:0000047
-name: gastrula
-namespace: zebrafish_stages
+id: XAO:1000089
+name: premetamorphosis stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Tadpole stage during which limb bud growth occurs, comprising Nieuwkoop and Faber stages 45 to 54." [ISBN:0124554032]
subset: life_stage
-is_a: UBERON:0000109 ! gastrula stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0000109 ! gastrula stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0000045 ! blastula
-property_value: IAO:0000589 "gastrula stage (ZFS)" xsd:string
+synonym: "premetamorphosis" EXACT []
+is_a: UBERON:0009849 ! tadpole stage
+relationship: immediately_preceded_by XAO:1000080 ! late tailbud stage (xenopus)
[Term]
-id: ZFS:0000048
-name: larva
-namespace: zebrafish_stages
+id: XAO:1000090
+name: prometamorphosis stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Metamorphosing tadpole stage during which toe differentiation and rapid hindlimb growth continue, comprising Nieuwkoop and Faber stages 55 to 57." [ISBN:0124554032]
subset: life_stage
-is_a: UBERON:0000069 ! larval stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0000069 ! larval stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0007000 ! hatching
-property_value: IAO:0000589 "larval stage (ZFS)" xsd:string
+synonym: "prometamorphosis" EXACT []
+is_a: XAO:1000079 ! metamorphosing tadpole stage (xenopus)
[Term]
-id: ZFS:0000049
-name: segmentation
-namespace: zebrafish_stages
+id: XAO:1000091
+name: climax stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Metamorphosing tadpole stage during which tail resorption occurs, comprising Nieuwkoop and Faber stages 58 to 66." [ISBN:0124554032]
subset: life_stage
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000047 ! gastrula
+synonym: "climax" EXACT []
+is_a: XAO:1000079 ! metamorphosing tadpole stage (xenopus)
+relationship: immediately_preceded_by XAO:1000090 ! prometamorphosis stage (xenopus)
[Term]
-id: ZFS:0000050
-name: pharyngula
-namespace: zebrafish_stages
+id: XAO:1000092
+name: mature egg stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "The developmental stage of the female gamete at which the gamete has reached maturity." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-is_a: UBERON:0004707 ! pharyngula stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0004707 ! pharyngula stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0000049 ! segmentation
-property_value: IAO:0000589 "pharyngula stage (ZFS)" xsd:string
+synonym: "mature egg" RELATED []
+is_a: XAO:1000082 ! unfertilized egg stage (xenopus)
+relationship: immediately_preceded_by XAO:1000088 ! oocyte stage VI (xenopus)
+created_by: lab
+creation_date: 2011-09-09T02:32:08Z
[Term]
-id: ZFS:0000051
-name: juvenile
-namespace: zebrafish_stages
+id: XAO:1000094
+name: NF stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Xenopus developmental stage that is one of the 66 standard chronological embryonic and tadpole stages originally described by Nieuwkoop and Faber in the Normal Table of Xenopus laevis (Daudin)." [https://orcid.org/0000-0002-9611-1279, ISBN:0815318960]
subset: life_stage
-is_a: UBERON:0000112 ! sexually immature stage
-is_a: ZFS:0000000 ! Unknown
-intersection_of: UBERON:0000112 ! sexually immature stage
-intersection_of: BFO:0000066 NCBITaxon:7954 ! occurs in Danio
-relationship: immediately_preceded_by ZFS:0000048 ! larva
-property_value: IAO:0000589 "sexually immature stage (ZFS)" xsd:string
+synonym: "Nieuwkoop and Faber stage" EXACT []
+synonym: "Nieuwkoop-Faber stage" EXACT []
+is_a: UBERON:0000105 ! life cycle stage
+created_by: eriksegerdell
+creation_date: 2013-02-09T18:40:27Z
[Term]
-id: ZFS:0007000
-name: hatching
-namespace: zebrafish_stages
+id: XAO:1000095
+name: post-embryonic stage (xenopus)
+namespace: xenopus_developmental_stage
+def: "Xenopus developmental stage that succeeds the embryonic stage." [https://orcid.org/0000-0002-9611-1279]
subset: life_stage
-is_a: ZFS:0000000 ! Unknown
-relationship: immediately_preceded_by ZFS:0000050 ! pharyngula
-created_by: yvonne
-creation_date: 2014-11-05T08:33:09Z
+xref: UBERON:0000092
+is_a: UBERON:0000105 ! life cycle stage
+relationship: immediately_preceded_by UBERON:0000068 ! embryo stage
[Typedef]
id: BFO:0000066
@@ -27267,6 +23391,19 @@ transitive_over: part_of ! part of
created_by: https://orcid.org/0000-0002-1373-1705
creation_date: 2020-07-17T09:26:52Z
+[Typedef]
+id: RO:0015004
+name: has characterizing marker set
+def: "A relation that applies between a cell type and a set of markers that can be used to uniquely identify that cell type." []
+synonym: "has marker gene combination" EXACT []
+synonym: "has marker signature set" EXACT []
+property_value: curator_notes "This relation is not meant for cases where set of genes/proteins are only useful as markers in some specific context - e.g. in some specific location. In these cases it is recommended to make a more specific cell class restricted to the relevant context." xsd:string
+property_value: dc-contributor https://orcid.org/0000-0001-7258-9596
+property_value: editor_note "C has_characterizing_marker_set y iff: C is a cell type and y is a collection of genes or proteins whose expression is sufficient to distinguish cell type C from most or all other cell types." xsd:string
+property_value: example_of_usage "'Lamp5-like Egln3_1 primary motor cortex GABAergic interneuron (Mus musculus)' subClass_of: has_characterizing_marker_set some 'NS forest marker set of Lamp5-like Egln3_1 MOp (Mouse).'; NS forest marker set of Lamp5-like Egln3_1 SubClass_of: ('has part' some 'Mouse Fbn2') and ('has part' some 'Mouse Chrna7') and ('has part' some 'Mouse Fam19a1')." xsd:string
+property_value: example_of_usage "transcriptomically defined cell type X subClass_of: (has_characterizing_marker_set some S1); S1 has_part some gene 1, S1 has_part some gene 2, S1 has_part some gene 3." xsd:string
+domain: CL:0000000 ! cell
+
[Typedef]
id: RO:0015011
name: has cross section
@@ -27322,26 +23459,6 @@ range: PATO:0000001 ! quality
holds_over_chain: RO:0002211 RO:0019000
is_a: RO:0002410 ! causally related to
-[Typedef]
-id: RO:0020101
-name: vessel supplies blood to
-def: "x vessel supplies blood to y if and only if x is a vessel that supplies blood directly or indirectly to an anatomical structure y." []
-property_value: dc-contributor https://orcid.org/0000-0001-6677-8489
-property_value: dcterms-date "2024-02-01T10:09:22Z" xsd:dateTime
-property_value: example_of_usage "brachial artery vessel supplies blood to brachialis muscle" xsd:string
-range: UBERON:0000061 ! anatomical structure
-is_a: supplies ! supplies
-
-[Typedef]
-id: RO:0020102
-name: vessel drains blood from
-def: "x vessel drains blood from y if and only if x is a vessel that drains blood directly or indirectly from an anatomical structure y." []
-property_value: dc-contributor https://orcid.org/0000-0001-6677-8489
-property_value: dcterms-date "2024-02-01T10:09:41Z" xsd:dateTime
-property_value: example_of_usage "cystic vein vessel drains blood from gallbladder" xsd:string
-range: UBERON:0000061 ! anatomical structure
-is_a: drains ! drains
-
[Typedef]
id: RO:0020103
name: directly supplies and drains
@@ -27954,6 +24071,212 @@ def: "An administrative note intended for its editor. It may not be included in
xref: IAO:0000116
is_metadata_tag: true
+[Typedef]
+id: end_dpb
+name: end, days post birth
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: dog_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: rabbit_stages_ontology
+def: "Count of number of days intervening between the end of the stage and the time of birth according to a reference model. Note that the first day of post-birth development has the value of 1 for this property, and the period during which the child is one day old has the value 2" []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+is_metadata_tag: true
+
+[Typedef]
+id: end_dpc
+name: end, days post coitum
+namespace: mouse_stages_ontology
+namespace: rat_stages_ontology
+def: "Count of number of days intervening between the end of the stage and the time of coitum, assuming that it takes place around midnight during a 7pm to 5am dark cycle (noon of the day on which the vaginal plug is found, the embryos are aged 0.5 days post coitum)." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Timed_Pregnancy]
+def: "Count of number of days intervening between the end of the stage and the time of coitum, defined as the time the vaginal plug is found. Note that the vaginal plug persists for 16-24 hours and may lasts as long as 48 hours." [http://web.jhu.edu/animalcare/procedures/rat.html]
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+is_metadata_tag: true
+
+[Typedef]
+id: end_dpf
+name: end, days post fertilization
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: chicken_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: lizard_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+def: "Count of number of days intervening between the end of the stage and the time of fertilization according to a reference model. Note that the first day of development has the value of 1 for this property." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+is_metadata_tag: true
+
+[Typedef]
+id: end_dph
+name: end, days post hatching
+namespace: Dpseudobscura_stages_ontology
+namespace: Dsimulans_stages_ontology
+def: "Count of number of days intervening between the end of the stage and the time of hatching according to a reference model. Note that the first day of post-birth development has the value of 1 for this property, and the period during which the organism is one day old has the value 2." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be applirabbition-dependent.
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+is_metadata_tag: true
+
+[Typedef]
+id: end_mpb
+name: end, months post birth
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rat_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+def: "Count of number of months intervening between the end of the stage and the time of birth according to a reference model. Note that the first month of post-birth development has the value of 1 for this property, and the period during which the child is one month old has the value 2" []
+def: "Count of number of months intervening between the end of the stage and the time of birth according to a reference model. Note that the first month of post-birth development has the value of 1 for this property, and the period during which the mouse is one month old has the value 2" []
+def: "Count of number of months intervening between the end of the stage and the time of birth according to a reference model. Note that the first month of post-birth development has the value of 1 for this property, and the period during which the organism is one month old has the value 2" []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+is_metadata_tag: true
+
+[Typedef]
+id: end_mpf
+name: end, months post fertilization
+namespace: bonobo_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+def: "Count of number of months intervening between the end of the stage and the time of fertilization according to a reference model. Note that the first month of development has the value of 1 for this property, and the period during which the organism is one month old has the value 2" []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+is_metadata_tag: true
+
+[Typedef]
+id: end_mph
+name: end, months post hatching
+namespace: chicken_stages_ontology
+namespace: lizard_stages_ontology
+def: "Count of number of months intervening between the end of the stage and the time of hatching according to a reference model. Note that the first month of post-birth development has the value of 1 for this property, and the period during which the organism is one month old has the value 2" []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+is_metadata_tag: true
+
+[Typedef]
+id: end_wpb
+name: end, weeks post birth
+namespace: cow_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rat_stages_ontology
+def: "Count of number of weeks intervening between the end of the stage and the time of birth according to a reference model. Note that the first week of post-birth development has the value of 1 for this property, and the period during which the mouse is one week old has the value 2" []
+def: "Count of number of weeks intervening between the end of the stage and the time of birth according to a reference model. Note that the first week of post-birth development has the value of 1 for this property, and the period during which the rat is one week old has the value 2" []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000034
+property_value: has_unit UO:0000034
+property_value: has_unit UO:0000034
+property_value: has_unit UO:0000034
+property_value: has_unit UO:0000034
+is_metadata_tag: true
+
+[Typedef]
+id: end_ypb
+name: end, years post birth
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+def: "Count of number of years intervening between the end of the stage and the time of birth according to a reference model. Note that the first year of post-birth development has the value of 1 for this property, and the period during which the child is one year old has the value 2" []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+is_metadata_tag: true
+
+[Typedef]
+id: end_yph
+name: end, years post hatching
+namespace: pufferfish_stages_ontology
+def: "Count of number of years intervening between the end of the stage and the time of hatching according to a reference model. Note that the first year of post-birth development has the value of 1 for this property, and the period during which the organism is one year old has the value 2" []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000036
+is_metadata_tag: true
+
[Typedef]
id: ends
name: ends
@@ -28200,6 +24523,31 @@ holds_over_chain: has_part develops_from
is_a: RO:0002258 ! developmentally preceded by
inverse_of: RO:0002255 ! developmentally contributes to
+[Typedef]
+id: has_end_time
+name: has end time
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: chicken_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: Dpseudobscura_stages_ontology
+namespace: Dsimulans_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: lizard_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rat_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+is_metadata_tag: true
+
[Typedef]
id: has_fused_element
name: derived from ancestral fusion of
@@ -28338,11 +24686,70 @@ is_a: has_part ! has part
inverse_of: skeleton_of ! skeleton of
is_asymmetric: true
+[Typedef]
+id: has_stage_marker
+name: has stage marker
+namespace: human_stages_ontology
+def: "A relationship between a stage class and an anatomical structure or developmental process class, in which the stage is characterized by the appearance of the structure or the occurrence of the biological process" []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+is_metadata_tag: true
+
[Typedef]
id: has_start
name: has_start
namespace: uberon
+[Typedef]
+id: has_start_time
+name: has start time
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: chicken_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: Dpseudobscura_stages_ontology
+namespace: Dsimulans_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: lizard_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rat_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+is_metadata_tag: true
+
+[Typedef]
+id: has_unit
+name: has unit
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: chicken_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: Dpseudobscura_stages_ontology
+namespace: Dsimulans_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: lizard_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rat_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+comment: Used to associate a measurement property (e.g. days post fertilization) with a unit (e.g. days)
+is_metadata_tag: true
+
[Typedef]
id: homologous_in
name: homologous_in
@@ -28731,6 +25138,15 @@ xref: RO:0002572
domain: BFO:0000141 ! immaterial entity
is_a: lumen_of ! lumen of
+[Typedef]
+id: month_of_gestation
+name: month of gestation
+namespace: human_stages_ontology
+def: "Defines the start and end of a stage with a duration of 1 month, relative to either the time of fertilization or last menstrual period of the mother (to be clarified), counting from one, in terms of a reference model. Thus if month_of_gestation=3, then the stage is 2 month in." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000035
+is_metadata_tag: true
+
[Typedef]
id: mutually_spatially_disjoint_with
name: mutually spatially disjoint with
@@ -29173,6 +25589,216 @@ namespace: uberon
xref: UBPROP:0000201
is_metadata_tag: true
+[Typedef]
+id: start_dpb
+name: start, days post birth
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: dog_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: rabbit_stages_ontology
+def: "Count of number of days intervening between the start of the stage and the time of birth according to a reference model. Note that the first day of post-birth development has the value of 0 for this property, and the period during which the child is one day old has the value 1." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+is_metadata_tag: true
+
+[Typedef]
+id: start_dpc
+name: start, days post coitum
+namespace: mouse_stages_ontology
+namespace: rat_stages_ontology
+def: "Count of number of days intervening between the start of the stage and the time of coitum, assuming that it takes place around midnight during a 7pm to 5am dark cycle (noon of the day on which the vaginal plug is found, the embryos are aged 0.5 days post coitum)." [http://php.med.unsw.edu.au/embryology/index.php?title=Mouse_Stages#Timed_Pregnancy]
+def: "Count of number of days intervening between the start of the stage and the time of coitum, defined as the time the vaginal plug is found. Note that the vaginal plug persists for 16-24 hours and may lasts as long as 48 hours." [http://web.jhu.edu/animalcare/procedures/rat.html]
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+is_metadata_tag: true
+
+[Typedef]
+id: start_dpf
+name: start, days post fertilization
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: chicken_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: lizard_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rat_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+def: "Count of number of days intervening between the start of the stage and the time of fertilization according to a reference model. Note that the first day of development has the value of 0 for this property." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+is_metadata_tag: true
+
+[Typedef]
+id: start_dph
+name: start, days post hatching
+namespace: Dpseudobscura_stages_ontology
+namespace: Dsimulans_stages_ontology
+def: "Count of number of days intervening between the start of the stage and the time of hatching according to a reference model. Note that the first day of post-birth development has the value of 0 for this property, and the period during which the organism is one day old has the value 1." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000033
+property_value: has_unit UO:0000033
+is_metadata_tag: true
+
+[Typedef]
+id: start_mpb
+name: start, months post birth
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rat_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+def: "Count of number of months intervening between the start of the stage and the time of birth according to a reference model. Note that the first month of post-birth development has the value of 0 for this property, and the period during which the child is one month old has the value 1." []
+def: "Count of number of months intervening between the start of the stage and the time of birth according to a reference model. Note that the first month of post-birth development has the value of 0 for this property, and the period during which the mouse is one month old has the value 1." []
+def: "Count of number of months intervening between the start of the stage and the time of birth according to a reference model. Note that the first month of post-birth development has the value of 0 for this property, and the period during which the organism is one month old has the value 1." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+is_metadata_tag: true
+
+[Typedef]
+id: start_mpf
+name: start, months post fertilization
+namespace: bonobo_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+def: "Count of number of months intervening between the start of the stage and the time of fertilization according to a reference model. Note that the first month of development has the value of 1 for this property, and the period during which the organism is one month old has the value 1." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+is_metadata_tag: true
+
+[Typedef]
+id: start_mph
+name: start, months post hatching
+namespace: chicken_stages_ontology
+namespace: lizard_stages_ontology
+def: "Count of number of months intervening between the start of the stage and the time of hatching according to a reference model. Note that the first month of post-birth development has the value of 0 for this property, and the period during which the organism is one month old has the value 1." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000035
+property_value: has_unit UO:0000035
+is_metadata_tag: true
+
+[Typedef]
+id: start_wpb
+name: start, weeks post birth
+namespace: cow_stages_ontology
+namespace: mouse_stages_ontology
+namespace: opossum_stages_ontology
+namespace: platypus_stages_ontology
+namespace: rat_stages_ontology
+def: "Count of number of weeks intervening between the start of the stage and the time of birth according to a reference model. Note that the first week of post-birth development has the value of 0 for this property, and the period during which the mouse is one week old has the value 1." []
+def: "Count of number of weeks intervening between the start of the stage and the time of birth according to a reference model. Note that the first week of post-birth development has the value of 0 for this property, and the period during which the rat is one week old has the value 1." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000034
+property_value: has_unit UO:0000034
+property_value: has_unit UO:0000034
+property_value: has_unit UO:0000034
+property_value: has_unit UO:0000034
+is_metadata_tag: true
+
+[Typedef]
+id: start_ypb
+name: start, years post birth
+namespace: bonobo_stages_ontology
+namespace: cat_stages_ontology
+namespace: cavy_stages_ontology
+namespace: chimpanzee_stages_ontology
+namespace: cow_stages_ontology
+namespace: dog_stages_ontology
+namespace: gorilla_stages_ontology
+namespace: horse_stages_ontology
+namespace: human_stages_ontology
+namespace: rabbit_stages_ontology
+namespace: rhesus_macaque_stages_ontology
+namespace: sheep_stages_ontology
+def: "Count of number of years intervening between the start of the stage and the time of birth according to a reference model. Note that the first year of post-birth development has the value of 0 for this property, and the period during which the child is one year old has the value 1." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+property_value: has_unit UO:0000036
+is_metadata_tag: true
+
+[Typedef]
+id: start_yph
+name: start, years post hatching
+namespace: pufferfish_stages_ontology
+def: "Count of number of years intervening between the start of the stage and the time of hatching according to a reference model. Note that the first year of post-birth development has the value of 0 for this property, and the period during which the organism is one year old has the value 1." []
+comment: This is a shortcut annotation that can be expanded to an OWL axiom, or to a set of OWL axioms. The exact translation has yet to be determined, and may be application-dependent.
+property_value: has_unit UO:0000036
+is_metadata_tag: true
+
[Typedef]
id: starts
name: starts
@@ -29379,3 +26005,27 @@ property_value: is_count_of UBERON:0002412
property_value: preceding_element_is BSPO:0000096
is_metadata_tag: true
+[Typedef]
+id: vessel_drains_blood_from
+name: vessel drains blood from
+namespace: uberon
+def: "x vessel drains blood from y if and only if x is a vessel that drains blood directly or indirectly from an anatomical structure y." []
+xref: RO:0020102
+property_value: dc-contributor https://orcid.org/0000-0001-6677-8489
+property_value: dcterms-date "2024-02-01T10:09:41Z" xsd:dateTime
+property_value: example_of_usage "cystic vein vessel drains blood from gallbladder" xsd:string
+range: UBERON:0000061 ! anatomical structure
+is_a: drains ! drains
+
+[Typedef]
+id: vessel_supplies_blood_to
+name: vessel supplies blood to
+namespace: uberon
+def: "x vessel supplies blood to y if and only if x is a vessel that supplies blood directly or indirectly to an anatomical structure y." []
+xref: RO:0020101
+property_value: dc-contributor https://orcid.org/0000-0001-6677-8489
+property_value: dcterms-date "2024-02-01T10:09:22Z" xsd:dateTime
+property_value: example_of_usage "brachial artery vessel supplies blood to brachialis muscle" xsd:string
+range: UBERON:0000061 ! anatomical structure
+is_a: supplies ! supplies
+
diff --git a/uberon-base.owl b/uberon-base.owl
index b8a95b8ff..0db58f108 100755
--- a/uberon-base.owl
+++ b/uberon-base.owl
@@ -2,7 +2,6 @@
+ xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
-
+
@@ -165,12 +162,9 @@
FMA part_of NCBITaxon:9606
HAO part_of NCBITaxon:7399
HBA part_of NCBITaxon:9606
- HsapDv part_of NCBITaxon:9606
KUPO part_of NCBITaxon:9606
MA part_of NCBITaxon:10090
MFO part_of NCBITaxon:8089
- MmusDv part_of NCBITaxon:10090
- OlatDv part_of NCBITaxon:8089
PBA part_of NCBITaxon:9443
SPD part_of NCBITaxon:6893
TADS part_of NCBITaxon:6939
@@ -182,7 +176,7 @@
ZFA part_of NCBITaxon:7954
ZFS part_of NCBITaxon:7954
Aurelie Comte, Bill Bug, Catherine Leroy, Duncan Davidson and Trish Whetzel are also contributors. However their ORCIDs were not found.
- 2024-11-25
+ 2025-01-15
http://uberon.org
@@ -2207,18 +2201,6 @@
-
-
-
-
-
-
-
-
-
-
-
-
@@ -3736,12 +3718,6 @@
-
-
-
-
-
-
@@ -4468,6 +4444,12 @@
+
+
+
+
+
+
@@ -6226,6 +6208,12 @@
+
+
+
+
+
+
@@ -12848,8 +12836,26 @@
BilaDO:0000004
EFO:0001272
FBdv:00005369
+ HsapDv:0010000
+ MmusDv:0000092
WBls:0000041
XtroDO:0000084
+ obo:BtauDv_0000078
+ obo:CfamDv_0000007
+ obo:DpseDv_0000005
+ obo:DsimDv_0000005
+ obo:EcabDv_0000007
+ obo:FcatDv_0000007
+ obo:GgalDv_0000076
+ obo:GgorDv_0000032
+ obo:MmulDv_0000052
+ obo:OanaDv_0000007
+ obo:OariDv_0000024
+ obo:PpanDv_0000041
+ obo:PtroDv_0000052
+ obo:RnorDv_0000061
+ obo:SsalDv_0000040
+ obo:SscrDv_0000084
fully formed animal stage
juvenile-adult stage
uberon
@@ -12864,6 +12870,114 @@
The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both sexually immature stage, and adult stage.
https://orcid.org/0000-0002-6601-2165
+
+
+
+ HsapDv:0010000
+
+
+
+
+
+ MmusDv:0000092
+
+
+
+
+
+ obo:BtauDv_0000078
+
+
+
+
+
+ obo:CfamDv_0000007
+
+
+
+
+
+ obo:DpseDv_0000005
+
+
+
+
+
+ obo:DsimDv_0000005
+
+
+
+
+
+ obo:EcabDv_0000007
+
+
+
+
+
+ obo:FcatDv_0000007
+
+
+
+
+
+ obo:GgalDv_0000076
+
+
+
+
+
+ obo:GgorDv_0000032
+
+
+
+
+
+ obo:MmulDv_0000052
+
+
+
+
+
+ obo:OanaDv_0000007
+
+
+
+
+
+ obo:OariDv_0000024
+
+
+
+
+
+ obo:PpanDv_0000041
+
+
+
+
+
+ obo:PtroDv_0000052
+
+
+
+
+
+ obo:RnorDv_0000061
+
+
+
+
+
+ obo:SsalDv_0000040
+
+
+
+
+
+ obo:SscrDv_0000084
+
+
@@ -12916,8 +13030,8 @@
EV:0300001
FBdv:00005289
FMA:72652
- HsapDv:0000002
- MmusDv:0000002
+ HsapDv:0000045
+ MmusDv:0000042
OGES:000000
OGES:000022
SCTID:296280003
@@ -12925,6 +13039,26 @@
WBls:0000092
WBls:0000102
XAO:1000012
+ obo:AcarDv_0000002
+ obo:BtauDv_0000002
+ obo:CfamDv_0000002
+ obo:CporDv_0000002
+ obo:DpseDv_0000002
+ obo:DsimDv_0000002
+ obo:EcabDv_0000002
+ obo:FcatDv_0000002
+ obo:GgalDv_0000002
+ obo:GgorDv_0000002
+ obo:MdomDv_0000002
+ obo:MmulDv_0000002
+ obo:OanaDv_0000002
+ obo:OariDv_0000002
+ obo:OcunDv_0000002
+ obo:PpanDv_0000002
+ obo:PtroDv_0000002
+ obo:RnorDv_0000002
+ obo:SsalDv_0000002
+ obo:SscrDv_0000002
embryonic stage
uberon
embryogenesis
@@ -12937,6 +13071,138 @@
A life cycle stage that starts with fertilization and ends with the fully formed embryo.
http://orcid.org/0000-0002-6601-2165
+
+
+
+ HsapDv:0000045
+
+
+
+
+
+ MmusDv:0000042
+
+
+
+
+
+ obo:AcarDv_0000002
+
+
+
+
+
+ obo:BtauDv_0000002
+
+
+
+
+
+ obo:CfamDv_0000002
+
+
+
+
+
+ obo:CporDv_0000002
+
+
+
+
+
+ obo:DpseDv_0000002
+
+
+
+
+
+ obo:DsimDv_0000002
+
+
+
+
+
+ obo:EcabDv_0000002
+
+
+
+
+
+ obo:FcatDv_0000002
+
+
+
+
+
+ obo:GgalDv_0000002
+
+
+
+
+
+ obo:GgorDv_0000002
+
+
+
+
+
+ obo:MdomDv_0000002
+
+
+
+
+
+ obo:MmulDv_0000002
+
+
+
+
+
+ obo:OanaDv_0000002
+
+
+
+
+
+ obo:OariDv_0000002
+
+
+
+
+
+ obo:OcunDv_0000002
+
+
+
+
+
+ obo:PpanDv_0000002
+
+
+
+
+
+ obo:PtroDv_0000002
+
+
+
+
+
+ obo:RnorDv_0000002
+
+
+
+
+
+ obo:SsalDv_0000002
+
+
+
+
+
+ obo:SscrDv_0000002
+
+
@@ -12974,6 +13240,9 @@
OGES:000008
Wikipedia:Larva
ZFS:0000048
+ obo:DpseDv_0000003
+ obo:DsimDv_0000003
+ obo:SsalDv_0000039
larva stage
ammocoete
ammocoete stage
@@ -13025,6 +13294,24 @@
It is a misunderstanding that the larval form always reflects the group's evolutionary history. It could be the case, but often the larval stage has evolved secondarily, as in insects. In these cases the larval form might differ more from the group's common origin than the adult form
WP
+
+
+
+ obo:DpseDv_0000003
+
+
+
+
+
+ obo:DsimDv_0000003
+
+
+
+
+
+ obo:SsalDv_0000039
+
+
@@ -13263,7 +13550,7 @@
-
+
@@ -13280,6 +13567,8 @@
The pupal stage is found only in holometabolous insects, those that undergo a complete metamorphosis, going through four life stages; embryo, larva, pupa and imago
FBdv:00005349
Wikipedia:Pupa
+ obo:DpseDv_0000004
+ obo:DsimDv_0000004
pupa stage
aurelia stage
chrysalides stage
@@ -13289,14 +13578,14 @@
pupal stage
https://github.com/obophenotype/uberon/issues/562
-
+
-
+
may be better to model pupal development as including the pre-pupal stage
@@ -13306,6 +13595,18 @@
Wikipedia:Pupa
https://github.com/obophenotype/uberon/issues/562
+
+
+
+ obo:DpseDv_0000004
+
+
+
+
+
+ obo:DsimDv_0000004
+
+
@@ -13392,6 +13693,7 @@
An section of a respiratory tract.
+
MA:0000434 has subclasses upper and lower, so it corresponds to a segment of the tract, rather than the tract as a whole
FMA:45660
MA:0000434
@@ -13399,6 +13701,7 @@
respiratory tract
subdivision of respiratory tract
UBERON:0000072
+
proximo-distal subdivision of respiratory tract
@@ -13484,7 +13787,7 @@
-
+
@@ -13536,14 +13839,14 @@
http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg
https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg
-
+
-
+
FMA
MA
@@ -13688,7 +13991,7 @@
-
+
The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm.
merge with non-neural. In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube)
@@ -13714,7 +14017,7 @@
external ectoderm
http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png
-
+
@@ -13727,7 +14030,7 @@
-
+
EHDAA2
@@ -14143,15 +14446,15 @@
-
-
+
+
-
+
@@ -14187,34 +14490,34 @@
metanephros
-
+
-
+
-
+
-
+
definitional
-
+
GO
-
+
ISBN:9780878932504
@@ -14407,8 +14710,8 @@
-
-
+
+
An epithelial swelling on the Wolffian duct that elongates to invade the adjacent metanephric mesenchyme[MP].
Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts. [Embryology, See_Dudek_RW_and_Fix_JD, Third_Edition_(2004)_Philadelphia:_Lippincott_William_and_Wilkins, p.137][VHOG]
Outgrowth of the mesonephric duct that penetrates the metanephric mesoderm and forms the ureter, renal pelvis, major and minor calyces and collecting ducts[VHOG:0000541].
@@ -14435,11 +14738,11 @@
ureteric bud
-
+
-
+
@@ -14452,13 +14755,13 @@
-
+
EHDAA2
-
+
ISBN:9780878932504
@@ -14544,7 +14847,7 @@
-
+
@@ -14587,14 +14890,14 @@
morula
http://upload.wikimedia.org/wikipedia/commons/c/c6/Blastulation.png
-
+
-
+
EHDAA2
@@ -14744,8 +15047,8 @@
-
-
+
+
A mass of cells that develop into the body of the embryo and some extraembryonic tissues.
A group of cells found in the mammalian blastocyst that give rise to the embryo. [Biology_Online][VHOG]
A small sphere of cells known as the inner cell mass lies within the trophoblast (of all eutherian mammals).[well established][VHOG]
@@ -14773,24 +15076,24 @@
inner cell mass
https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg
-
+
-
+
-
+
Wikipedia
-
+
Wikipedia
@@ -14857,7 +15160,7 @@
-
+
@@ -14890,14 +15193,14 @@
trophoblast
https://upload.wikimedia.org/wikipedia/commons/7/72/Blastocyst_English.svg
-
+
-
+
MP-def
PMID:19829370
@@ -15188,7 +15491,7 @@
-
+
A flattened, almost circular bilaminar plate of cells formed when the inner cell mass (aka embryoblast) forms two epithelial layers, each of a distinct lineage, separated by an extracellular basement membrane: the external (dorsal) layer is called the epiblast and the internal (ventral) layer is called the hypoblast (aka primitive endoderm); together, they compose the bilaminar embryonic disc.
embryonic disc
embryonic shield
@@ -15208,14 +15511,14 @@
bilaminar disc
http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray21.png
-
+
-
+
Wikipedia
@@ -15295,6 +15598,7 @@
WBls:0000022
WBls:0000093
WBls:0000103
+ obo:SsalDv_0000038
postembryonic stage
post-hatching stage
uberon
@@ -15309,6 +15613,12 @@
Stage succeeding embryo, including mature structure.
https://orcid.org/0000-0002-6601-2165
+
+
+
+ obo:SsalDv_0000038
+
+
@@ -15339,7 +15649,7 @@
-
+
Nonparenchymatous organ that primarily consists of dense connective tissue organized into a sheet which interconnects two or more organs, separates two or more body spaces from one another, or surrounds an organ or body part. Examples: interosseous membrane of forearm, obturator membrane, tympanic membrane, fibrous pericardium, fascia lata, dura mater. [FMA].
2009-07-30T05:19:13Z
@@ -15350,14 +15660,14 @@
UBERON:0000094
membrane organ
-
+
-
+
FMA-def
@@ -15380,7 +15690,7 @@
-
+
Portion of neural crest that develops from the dorsal neural tube. It overlaps the vagal neural crest and migrates to populate the pharyngeal arches 3, 4 and 6 (producing structures in the head) and to the heart, forming connective tissue that separates the great vessels of the heart. [Wikipedia].
A subpopulation of the cephalic neural crest that emerges from the otic level to the anterior limit of somite 4. It migrates to the heart and is essential for the septation of the outflow track[DOI:10.1242/dev.091751].
ZFA treats this as a subtype of NC.
@@ -15397,14 +15707,14 @@
cardiac neural crest
-
+
-
+
Wikipedia
@@ -15444,7 +15754,7 @@
-
+
The orifice of invagination of the endomesodermal cells during the embryonic stages of an organism.
A slit-like invagination on the dorsal side of the blastula surface of the embryo where the mesoderm and endoderm move inside the embryo at gatrulation.[AAO]
@@ -15460,14 +15770,14 @@
blastopore
https://github.com/obophenotype/uberon/issues/660
-
+
-
+
https://orcid.org/0000-0003-3308-6245
@@ -15669,6 +15979,26 @@
MmusDv:0000001
OGES:000011
ncithesaurus:Life
+ obo:AcarDv_0000001
+ obo:BtauDv_0000001
+ obo:CfamDv_0000001
+ obo:CporDv_0000001
+ obo:DpseDv_0000001
+ obo:DsimDv_0000001
+ obo:EcabDv_0000001
+ obo:FcatDv_0000001
+ obo:GgalDv_0000001
+ obo:GgorDv_0000001
+ obo:MdomDv_0000001
+ obo:MmulDv_0000001
+ obo:OanaDv_0000001
+ obo:OariDv_0000001
+ obo:OcunDv_0000001
+ obo:PpanDv_0000001
+ obo:PtroDv_0000001
+ obo:RnorDv_0000001
+ obo:SsalDv_0000001
+ obo:SscrDv_0000001
entire life cycle
entire lifespan
life
@@ -15686,6 +16016,138 @@
An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism.
https://orcid.org/0000-0002-6601-2165
+
+
+
+ HsapDv:0000001
+
+
+
+
+
+ MmusDv:0000001
+
+
+
+
+
+ obo:AcarDv_0000001
+
+
+
+
+
+ obo:BtauDv_0000001
+
+
+
+
+
+ obo:CfamDv_0000001
+
+
+
+
+
+ obo:CporDv_0000001
+
+
+
+
+
+ obo:DpseDv_0000001
+
+
+
+
+
+ obo:DsimDv_0000001
+
+
+
+
+
+ obo:EcabDv_0000001
+
+
+
+
+
+ obo:FcatDv_0000001
+
+
+
+
+
+ obo:GgalDv_0000001
+
+
+
+
+
+ obo:GgorDv_0000001
+
+
+
+
+
+ obo:MdomDv_0000001
+
+
+
+
+
+ obo:MmulDv_0000001
+
+
+
+
+
+ obo:OanaDv_0000001
+
+
+
+
+
+ obo:OariDv_0000001
+
+
+
+
+
+ obo:OcunDv_0000001
+
+
+
+
+
+ obo:PpanDv_0000001
+
+
+
+
+
+ obo:PtroDv_0000001
+
+
+
+
+
+ obo:RnorDv_0000001
+
+
+
+
+
+ obo:SsalDv_0000001
+
+
+
+
+
+ obo:SscrDv_0000001
+
+
@@ -15713,13 +16175,32 @@
HsapDv:0000000
MESH:D008018
MmusDv:0000000
- OlatDv:0000010
PdumDv:0000090
WBls:0000002
XAO:1000000
ZFS:0000000
ZFS:0100000
ncithesaurus:Developmental_Stage
+ obo:AcarDv_0000000
+ obo:BtauDv_0000000
+ obo:CfamDv_0000000
+ obo:CporDv_0000000
+ obo:DpseDv_0000000
+ obo:DsimDv_0000000
+ obo:EcabDv_0000000
+ obo:FcatDv_0000000
+ obo:GgalDv_0000000
+ obo:GgorDv_0000000
+ obo:MdomDv_0000000
+ obo:MmulDv_0000000
+ obo:OanaDv_0000000
+ obo:OariDv_0000000
+ obo:OcunDv_0000000
+ obo:PpanDv_0000000
+ obo:PtroDv_0000000
+ obo:RnorDv_0000000
+ obo:SsalDv_0000000
+ obo:SscrDv_0000000
developmental stage
stage
uberon
@@ -15735,6 +16216,138 @@
A spatiotemporal region encompassing some part of the life cycle of an organism.
https://orcid.org/0000-0002-6601-2165
+
+
+
+ HsapDv:0000000
+
+
+
+
+
+ MmusDv:0000000
+
+
+
+
+
+ obo:AcarDv_0000000
+
+
+
+
+
+ obo:BtauDv_0000000
+
+
+
+
+
+ obo:CfamDv_0000000
+
+
+
+
+
+ obo:CporDv_0000000
+
+
+
+
+
+ obo:DpseDv_0000000
+
+
+
+
+
+ obo:DsimDv_0000000
+
+
+
+
+
+ obo:EcabDv_0000000
+
+
+
+
+
+ obo:FcatDv_0000000
+
+
+
+
+
+ obo:GgalDv_0000000
+
+
+
+
+
+ obo:GgorDv_0000000
+
+
+
+
+
+ obo:MdomDv_0000000
+
+
+
+
+
+ obo:MmulDv_0000000
+
+
+
+
+
+ obo:OanaDv_0000000
+
+
+
+
+
+ obo:OariDv_0000000
+
+
+
+
+
+ obo:OcunDv_0000000
+
+
+
+
+
+ obo:PpanDv_0000000
+
+
+
+
+
+ obo:PtroDv_0000000
+
+
+
+
+
+ obo:RnorDv_0000000
+
+
+
+
+
+ obo:SsalDv_0000000
+
+
+
+
+
+ obo:SscrDv_0000000
+
+
@@ -15762,13 +16375,19 @@
EFO:0001322
EHDAA:27
FBdv:00005288
+ HsapDv:0000003
IDOMAL:0000302
+ MmusDv:0000003
NCIT:C12601
PdumDv:0000100
VHOG:0000745
Wikipedia:Zygote
XAO:1000001
ZFS:0000001
+ obo:OariDv_0000009
+ obo:RnorDv_0000048
+ obo:SsalDv_0000003
+ obo:SscrDv_0000087
1-cell stage
fertilized egg stage
one cell stage
@@ -15798,6 +16417,12 @@
ISBN:978-0030259821 Ruppert EE, Fox RS, Barnes RD, Invertebrate zoology: a functional evolutionary approach (2003) p.107
http://bgee.unil.ch/
+
+
+
+ HsapDv:0000003
+
+
@@ -15806,6 +16431,36 @@
https://github.com/biopragmatics/biomappings
+
+
+
+ MmusDv:0000003
+
+
+
+
+
+ obo:OariDv_0000009
+
+
+
+
+
+ obo:RnorDv_0000048
+
+
+
+
+
+ obo:SsalDv_0000003
+
+
+
+
+
+ obo:SscrDv_0000087
+
+
@@ -15873,6 +16528,7 @@
BilaDO:0000006
EFO:0001290
FBdv:00000054
+ HsapDv:0000005
MESH:D002970
MmusDv:0000004
OGES:000015
@@ -15881,6 +16537,11 @@
Wikipedia:Cleavage_(embryo)
XAO:1000004
ZFS:0000046
+ obo:GgalDv_0000064
+ obo:OariDv_0000010
+ obo:RnorDv_0000049
+ obo:SsalDv_0000004
+ obo:SscrDv_0000088
uberon
UBERON:0000107
@@ -15893,6 +16554,48 @@
GO:0040016
Wikipedia:Cleavage_(embryo)
+
+
+
+ HsapDv:0000005
+
+
+
+
+
+ MmusDv:0000004
+
+
+
+
+
+ obo:GgalDv_0000064
+
+
+
+
+
+ obo:OariDv_0000010
+
+
+
+
+
+ obo:RnorDv_0000049
+
+
+
+
+
+ obo:SsalDv_0000004
+
+
+
+
+
+ obo:SscrDv_0000088
+
+
@@ -15927,6 +16630,11 @@
Wikipedia:Blastula
XAO:1000003
ZFS:0000045
+ obo:GgalDv_0000091
+ obo:OariDv_0000025
+ obo:RnorDv_0000054
+ obo:SsalDv_0000012
+ obo:SscrDv_0000089
uberon
UBERON:0000108
@@ -15939,6 +16647,48 @@
An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence.
Wikipedia:Blastula
+
+
+
+ HsapDv:0000006
+
+
+
+
+
+ MmusDv:0000007
+
+
+
+
+
+ obo:GgalDv_0000091
+
+
+
+
+
+ obo:OariDv_0000025
+
+
+
+
+
+ obo:RnorDv_0000054
+
+
+
+
+
+ obo:SsalDv_0000012
+
+
+
+
+
+ obo:SscrDv_0000089
+
+
@@ -15953,7 +16703,7 @@
-
+
@@ -15978,6 +16728,11 @@
WBls:0000010
XAO:1000005
ZFS:0000047
+ obo:GgalDv_0000092
+ obo:OariDv_0000026
+ obo:RnorDv_0000005
+ obo:SsalDv_0000016
+ obo:SscrDv_0000090
uberon
blastocystis trilaminaris stage
trilaminar blastocyst stage
@@ -15989,14 +16744,14 @@
gastrula stage
-
+
-
+
BILS
@@ -16005,6 +16760,48 @@
A stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.
GO:0007369
+
+
+
+ HsapDv:0000010
+
+
+
+
+
+ MmusDv:0000013
+
+
+
+
+
+ obo:GgalDv_0000092
+
+
+
+
+
+ obo:OariDv_0000026
+
+
+
+
+
+ obo:RnorDv_0000005
+
+
+
+
+
+ obo:SsalDv_0000016
+
+
+
+
+
+ obo:SscrDv_0000090
+
+
@@ -16081,6 +16878,10 @@
HsapDv:0000012
MmusDv:0000017
XAO:1000006
+ obo:GgalDv_0000093
+ obo:OariDv_0000027
+ obo:RnorDv_0000007
+ obo:SscrDv_0000091
uberon
UBERON:0000110
neurula stage
@@ -16093,6 +16894,42 @@
Staged defined by the formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system.
GO:0001841
+
+
+
+ HsapDv:0000012
+
+
+
+
+
+ MmusDv:0000017
+
+
+
+
+
+ obo:GgalDv_0000093
+
+
+
+
+
+ obo:OariDv_0000027
+
+
+
+
+
+ obo:RnorDv_0000007
+
+
+
+
+
+ obo:SscrDv_0000091
+
+
@@ -16127,6 +16964,11 @@
OGES:000005
OGES:000032
Wikipedia:Organogenesis
+ obo:GgalDv_0000094
+ obo:OariDv_0000028
+ obo:RnorDv_0000055
+ obo:SsalDv_0000022
+ obo:SscrDv_0000086
uberon
segmentation stage
UBERON:0000111
@@ -16140,6 +16982,48 @@
A stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism.
Wikipedia:Organogenesis
+
+
+
+ HsapDv:0000015
+
+
+
+
+
+ MmusDv:0000018
+
+
+
+
+
+ obo:GgalDv_0000094
+
+
+
+
+
+ obo:OariDv_0000028
+
+
+
+
+
+ obo:RnorDv_0000055
+
+
+
+
+
+ obo:SsalDv_0000022
+
+
+
+
+
+ obo:SscrDv_0000086
+
+
@@ -16160,11 +17044,30 @@
BTO:0002168
EFO:0001300
EV:0300051
+ HsapDv:0000264
MmusDv:0000043
OGES:000009
XAO:1000010
XtroDO:0000083
ZFS:0000051
+ obo:AcarDv_0000003
+ obo:BtauDv_0000003
+ obo:CfamDv_0000003
+ obo:CporDv_0000003
+ obo:EcabDv_0000003
+ obo:FcatDv_0000003
+ obo:GgalDv_0000003
+ obo:GgorDv_0000003
+ obo:MdomDv_0000003
+ obo:MmulDv_0000003
+ obo:OanaDv_0000003
+ obo:OariDv_0000003
+ obo:OcunDv_0000003
+ obo:PpanDv_0000003
+ obo:PtroDv_0000003
+ obo:RnorDv_0000012
+ obo:SsalDv_0000041
+ obo:SscrDv_0000003
immature stage
juvenile stage
uberon
@@ -16174,6 +17077,132 @@
sexually immature stage
https://github.com/obophenotype/uberon/issues/427
+
+
+
+ The stage of being a sexually immature adult animal[XAO:1000010].
+ XAO:1000010
+
+
+
+
+ HsapDv:0000264
+
+
+
+
+
+ MmusDv:0000043
+
+
+
+
+
+ obo:AcarDv_0000003
+
+
+
+
+
+ obo:BtauDv_0000003
+
+
+
+
+
+ obo:CfamDv_0000003
+
+
+
+
+
+ obo:CporDv_0000003
+
+
+
+
+
+ obo:EcabDv_0000003
+
+
+
+
+
+ obo:FcatDv_0000003
+
+
+
+
+
+ obo:GgalDv_0000003
+
+
+
+
+
+ obo:GgorDv_0000003
+
+
+
+
+
+ obo:MdomDv_0000003
+
+
+
+
+
+ obo:MmulDv_0000003
+
+
+
+
+
+ obo:OanaDv_0000003
+
+
+
+
+
+ obo:OariDv_0000003
+
+
+
+
+
+ obo:OcunDv_0000003
+
+
+
+
+
+ obo:PpanDv_0000003
+
+
+
+
+
+ obo:PtroDv_0000003
+
+
+
+
+
+ obo:RnorDv_0000012
+
+
+
+
+
+ obo:SsalDv_0000041
+
+
+
+
+
+ obo:SscrDv_0000003
+
+
@@ -16192,12 +17221,6 @@
subadult stage
http://eol.org/schema/terms/subadult
-
-
-
- The stage of being a sexually immature adult animal[XAO:1000010].
- XAO:1000010
-
@@ -16223,12 +17246,31 @@
BILS:0000113
EV:0300064
EV:0300070
+ HsapDv:0000258
MIAA:0000403
MmusDv:0000110
OGES:000026
OGES:000027
XAO:1000093
ZFS:0000044
+ obo:AcarDv_0000004
+ obo:BtauDv_0000004
+ obo:CfamDv_0000004
+ obo:CporDv_0000004
+ obo:EcabDv_0000004
+ obo:FcatDv_0000004
+ obo:GgalDv_0000006
+ obo:GgorDv_0000006
+ obo:MdomDv_0000006
+ obo:MmulDv_0000021
+ obo:OanaDv_0000004
+ obo:OariDv_0000006
+ obo:OcunDv_0000004
+ obo:PpanDv_0000016
+ obo:PtroDv_0000011
+ obo:RnorDv_0000015
+ obo:SsalDv_0000042
+ obo:SscrDv_0000006
uberon
UBERON:0000113
post-juvenile adult stage
@@ -16241,6 +17283,126 @@
The stage of being a sexually mature adult animal.
https://orcid.org/0000-0002-6601-2165
+
+
+
+ HsapDv:0000258
+
+
+
+
+
+ MmusDv:0000110
+
+
+
+
+
+ obo:AcarDv_0000004
+
+
+
+
+
+ obo:BtauDv_0000004
+
+
+
+
+
+ obo:CfamDv_0000004
+
+
+
+
+
+ obo:CporDv_0000004
+
+
+
+
+
+ obo:EcabDv_0000004
+
+
+
+
+
+ obo:FcatDv_0000004
+
+
+
+
+
+ obo:GgalDv_0000006
+
+
+
+
+
+ obo:GgorDv_0000006
+
+
+
+
+
+ obo:MdomDv_0000006
+
+
+
+
+
+ obo:MmulDv_0000021
+
+
+
+
+
+ obo:OanaDv_0000004
+
+
+
+
+
+ obo:OariDv_0000006
+
+
+
+
+
+ obo:OcunDv_0000004
+
+
+
+
+
+ obo:PpanDv_0000016
+
+
+
+
+
+ obo:PtroDv_0000011
+
+
+
+
+
+ obo:RnorDv_0000015
+
+
+
+
+
+ obo:SsalDv_0000042
+
+
+
+
+
+ obo:SscrDv_0000006
+
+
@@ -16419,7 +17581,7 @@
-
+
@@ -16432,14 +17594,14 @@
lung saccule
-
+
-
+
GO
@@ -16549,7 +17711,7 @@
-
+
@@ -16577,7 +17739,7 @@
lung bud
http://upload.wikimedia.org/wikipedia/commons/7/71/Gray948.png
-
+
@@ -16590,7 +17752,7 @@
-
+
EHDAA2
@@ -17016,7 +18178,7 @@
-
+
@@ -17042,14 +18204,14 @@
neural nucleus
-
+
-
+
we limit this structure by definition to chordate and vertebrate nervous systems
@@ -17177,7 +18339,7 @@
-
+
@@ -17210,14 +18372,14 @@
facial nucleus
-
+
-
+
definitional
@@ -17974,7 +19136,7 @@
-
+
@@ -18013,14 +19175,14 @@
anal canal
https://upload.wikimedia.org/wikipedia/commons/0/01/Gray1078.png
-
+
-
+
Wikipathways:WP2062
@@ -18203,8 +19365,8 @@
-
-
+
+
@@ -18237,24 +19399,24 @@
UBERON:0000162
cloaca
-
+
-
+
-
+
ZFA
-
+
AAO
@@ -18336,8 +19498,8 @@
-
-
+
+
@@ -18356,24 +19518,24 @@
embryonic cloaca
-
+
-
+
-
+
EHDAA2
-
+
EHDAA2
@@ -18396,7 +19558,7 @@
-
+
@@ -18438,14 +19600,14 @@
primitive urogenital sinus
http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png
-
+
-
+
MP-def
@@ -18548,6 +19710,7 @@
The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks).
+
Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]
Molecular and developmental cell lineage data suggest that the acoel mouth opening is homologous to the mouth of protostomes and deuterostomes and that the last common ancestor of the Bilateria (the 'urbilaterian') had only this single digestive opening.[well established][VHOG]
oral
@@ -18599,6 +19762,7 @@
vestibulum oris
UBERON:0000165
+
@@ -19011,7 +20175,7 @@
-
+
@@ -19057,14 +20221,14 @@
pair of lungs
-
+
-
+
FMA-abduced
@@ -19451,15 +20615,15 @@
-
+
-
-
+
+
A fluid that is composed of blood plasma and erythrocytes.
This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid.
@@ -19501,34 +20665,34 @@
blood
-
+
-
+
-
+
-
+
CL:tm
-
+
https://github.com/obophenotype/uberon/issues/1330
-
+
Bgee:AN
@@ -19728,7 +20892,7 @@
-
+
The narrow part of the shaft of the radius just below the head.
FMA:23479
SCTID:181942005
@@ -19740,14 +20904,14 @@
neck of radius
-
+
-
+
FMA
@@ -20077,7 +21241,7 @@
-
+
Ventral part (base region) of the telencephalon.
BTO term refers specifically to the avian structure
@@ -20097,14 +21261,14 @@
ventral part of telencephalon
-
+
-
+
separated by cell-free region
@@ -20280,7 +21444,7 @@
-
+
@@ -20314,7 +21478,7 @@
http://upload.wikimedia.org/wikipedia/commons/9/97/Gray136.png
https://upload.wikimedia.org/wikipedia/commons/5/5b/Frontal_bone.png
-
+
@@ -20327,7 +21491,7 @@
-
+
cjm
@@ -20382,7 +21546,7 @@
-
+
@@ -20416,7 +21580,7 @@
tetrapod parietal bone
http://upload.wikimedia.org/wikipedia/commons/2/21/Gray132.png
-
+
@@ -20429,7 +21593,7 @@
-
+
PMID:11523816
@@ -20602,7 +21766,7 @@
-
+
A specialized claw or nail on the foot of certain primates, used for personal grooming.
2009-05-19T08:19:58Z
@@ -20611,14 +21775,14 @@
UBERON:0000212
toilet claw
-
+
-
+
Wikipedia
@@ -20726,7 +21890,7 @@
-
+
@@ -20759,14 +21923,14 @@
atlanto-occipital joint
http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png
-
+
-
+
FMA-abduced-lr
@@ -20860,9 +22024,9 @@
-
-
-
+
+
+
A closed space between the embryo and the amnion which contains the amniotic fluid and is formed by the fusion of the parts of the anterior and posterior amniotic folds.
The closed sac between the embryo and the amnion, containing the amniotic fluid. [Free_Online_Medical_Dictionary]
BTO:0000025
@@ -20882,34 +22046,34 @@
amniotic cavity
http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png
-
+
-
+
-
+
-
+
EHDAA2
-
+
cjm
-
+
cjm
@@ -20949,8 +22113,8 @@
-
-
+
+
An adductor muscle that attaches to the hip and femur. In humans, it is a part of the adductor group of the thigh, that as the name suggests adducts the thigh. The adductor longus muscle forms the medial wall of the femoral triangle[WP, generalized].
Originates on the iliac portion of the ventral iliac rim and inserts on the lateral surface of the M. adductor magnus.[AAO]
@@ -20971,11 +22135,11 @@
adductor longus
http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG
-
+
-
+
@@ -20988,14 +22152,14 @@
-
+
pubic body just below the pubic crest
dbpedia
-
+
linea aspera
dbpedia
@@ -21130,16 +22294,16 @@
-
-
+
+
-
-
+
+
The thin innermost layer of the extraembryonic membranes that contains the amniotic fluid; the membrane forms a closed sac in which the embryo and later, the fetus, is suspended and protected.
A thin but tough extraembryonic membrane of reptiles, birds and mammals that lines the chorion and contains the fEtus and the amniotic fluid around it. [Biology_Online][VHOG]
@@ -21168,44 +22332,44 @@
http://upload.wikimedia.org/wikipedia/commons/e/e7/Gray14.png
https://cdn.humanatlas.io/digital-objects/ref-organ/placenta-full-term-female/v1.1/assets/3d-vh-f-placenta-full-term.glb
-
+
-
+
-
+
-
+
-
+
Hymans
-
+
ISBN:0073040584
-
+
ISBN:0073040584-table5.4
-
+
ISBN:0073040584-table5.4
@@ -21480,8 +22644,8 @@
-
-
+
+
@@ -21501,24 +22665,24 @@
UBERON:0000312
inner cambium layer of periosteum
-
+
-
+
-
+
FMA
-
+
Wikipedia
@@ -21839,7 +23003,7 @@
-
+
@@ -21875,14 +23039,14 @@
http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray769-en.svg
http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray769.png
-
+
-
+
ISBN:0471888893
@@ -22377,7 +23541,7 @@
-
+
The branched tubular glands found in the mucosa of the fundus and body of the stomach which contain parietal cells that secrete hydrochloric acid and zymogenic cells that produce pepsin.
BTO:0000503
EMAPA:27181
@@ -22388,7 +23552,7 @@
gastric gland
-
+
@@ -22401,7 +23565,7 @@
-
+
ISBN:0073040584
@@ -23343,7 +24507,7 @@
-
+
The sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the orbit and its contents, the nasal cavity and the skin of the nose and forehead.
Sensory medial ramus of the trigeminal nerve.[AAO]
@@ -23395,14 +24559,14 @@
Terminology notes. This nerve is known by a ridiculous number of names[http://palaeos.com/vertebrates/glossary/glossaryPo.html]
ophthalmic nerve
-
+
-
+
may be a distinct nerve in teleosts
multiple
@@ -23661,14 +24825,14 @@
-
+
-
+
A fibrous membrane, which, in the neck, represents the supraspinal ligaments of the upper vertebrae.
@@ -23690,24 +24854,24 @@
UBERON:0000351
nuchal ligament
-
+
-
+
-
+
BTO
-
+
C7 in humans
@@ -24648,8 +25812,8 @@
-
-
+
+
The adductor brevis is a muscle in the thigh situated immediately behind the pectineus and adductor longus. It is somewhat triangular in form, and arises by a narrow origin from the outer surfaces of the superior and inferior rami of the pubis, between the gracilis and obturator externus. Its fibers, passing backward, lateralward, and downward, are inserted, by an aponeurosis, into the line leading from the lesser trochanter to the linea aspera and into the upper part of the linea aspera, immediately behind the pectineus and upper part of the adductor longus.[WP].
BTO:0001288
@@ -24665,11 +25829,11 @@
adductor brevis
http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG
-
+
-
+
@@ -24682,14 +25846,14 @@
-
+
anterior surface of the inferior ramus and body of the pubis
dbpedia
-
+
the lesser trochanter and linea aspera of the femur
dbpedia
@@ -24712,7 +25876,7 @@
-
+
The corpus striatum (striated body) is a compound structure consisting of the caudate nucleus and the lentiform nucleus, which consists of the putamen and the globus pallidus[WP].
Thus, certain telencephalic characters - such as the presence of a pallium divided into lateral, dorsal, and medial formations and a subpallium divided into striatum and septum - appear to characterize all vertebrates. They are primitive characters and are homologous among all vertebrates.[well established][VHOG]
The term has been used in a few different ways: * It is a pair of nuclear masses which form the basal ganglia, along with the subthalamic nucleus and the substantia nigra. * It may also refer to both the basal ganglia and internal capsule collectively.[2]
@@ -24742,14 +25906,14 @@
corpus striatum
http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray656.png
-
+
-
+
MA
@@ -24794,9 +25958,9 @@
-
-
-
+
+
+
An adductor muscle that attaches to the pelvic bone and the femur. In humans, the adductor magnus is a large triangular muscle, situated on the medial side of the thigh. The portion which arises from the ischiopubic ramus (a small part of the inferior ramus of the pubis, and the inferior ramus of the ischium) is called the 'adductor magnesius portion', and the portion arising from the tuberosity of the ischium is called the 'hamstring portion'. The hamstring portion is not considered part of the hamstring group of muscles, but it is adjacent to it.[WP,generalized].
Origin by two heads that are separated by a ventral tendon of the M. semitendinosus. One head originates from the ventral border of the pubic portion of the pelvic rim. The other head originates from the ischiatic border of the pelvic rim. The ventral head fuses with accessory head from the M. semitendinosus and inserts along the ventro-medial border of the femur. The dorsal belly merges with the ventral and accessory heads and inserts along the medial surface of the femur.[AAO]
@@ -24816,15 +25980,15 @@
adductor magnus
http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG
-
+
-
+
-
+
@@ -24837,21 +26001,21 @@
-
+
posterior branch of obturator nerve and sciatic nerve
dbpedia
-
+
tuberosity of the ischium
dbpedia
-
+
dbpedia
@@ -24889,7 +26053,7 @@
-
+
@@ -24916,7 +26080,7 @@
syncytiotrophoblast
http://upload.wikimedia.org/wikipedia/commons/d/df/Gray36.png
-
+
@@ -24929,7 +26093,7 @@
-
+
EMAPA
@@ -24972,8 +26136,8 @@
-
-
+
+
A muscle on the upper surface of the foot that helps extend digits 2 through 4.
BTO:0001337
@@ -24990,25 +26154,25 @@
http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1241.png
http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray441.png
-
+
-
+
-
+
dorsal surface of calcaneus
dbpedia
-
+
proximal dorsal region of middle phalanges 2 3 and 4
dbpedia
@@ -25287,7 +26451,7 @@
-
+
@@ -25340,14 +26504,14 @@
hindlimb stylopod
http://upload.wikimedia.org/wikipedia/commons/4/4b/Gray1238.png
-
+
-
+
MA
@@ -25661,7 +26825,7 @@
-
+
@@ -25695,7 +26859,7 @@
tongue muscle
http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray1019.png
-
+
@@ -25708,7 +26872,7 @@
-
+
FEED:rd
ISBN:1607950324
@@ -25958,8 +27122,8 @@
+
-
BTO:0001400
uberon
UBERON:0000380
@@ -25973,14 +27137,14 @@
-
+
-
+
@@ -26014,24 +27178,24 @@
urinary bladder detrusor smooth muscle
https://upload.wikimedia.org/wikipedia/commons/5/57/Illu_bladder.jpg
-
+
-
+
-
+
FMA
-
+
posterior surface of the body of the pubis
dbpedia
@@ -26419,7 +27583,7 @@
-
+
A part of the pharynx that consists of a flap of elastic cartilage tissue plus a mucous membrane covering, attached to the entrance of the larynx. The epiglottis is found at the root of the tongue and folds back over the entrance to the larynx during swallowing, preventing inhalation of food or drink[MP,modified].
epiglottal
@@ -26439,14 +27603,14 @@
epiglottis
http://upload.wikimedia.org/wikipedia/commons/e/e2/Gray958.png
-
+
-
+
EHDAA2
@@ -26680,10 +27844,10 @@
-
-
-
-
+
+
+
+
The longissimus is the muscle lateral to the semispinalis. It is the longest subdivision of the sacrospinalis that extends forward into the transverse processes of the posterior cervical vertebrae. [WP,unvetted].
BTO:0001648
EMAPA:37648
@@ -26698,19 +27862,19 @@
longissimus muscle
http://upload.wikimedia.org/wikipedia/commons/1/1f/Longissimus.png
-
+
-
+
-
+
-
+
@@ -26723,25 +27887,25 @@
-
+
BTO
-
+
dbpedia
-
+
dbpedia
-
+
dbpedia
@@ -26801,7 +27965,7 @@
-
+
@@ -26838,14 +28002,14 @@
cochlear ganglion
http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray903.png
-
+
-
+
cell bodies
BTO-modified
Wikipedia
@@ -27297,7 +28461,7 @@
-
+
An epithelium that is part of a jejunum.
BTO:0001743
@@ -27312,14 +28476,14 @@
jejunal epithelium
-
+
-
+
FMA
@@ -27465,7 +28629,7 @@
-
+
@@ -27516,14 +28680,14 @@
http://upload.wikimedia.org/wikipedia/commons/5/55/Layers_of_the_scalp_and_meninges.png
https://upload.wikimedia.org/wikipedia/commons/e/eb/Double_cowlick.jpg
-
+
-
+
BTO
@@ -27565,7 +28729,7 @@
-
+
One of a a paired bundle of nerve fibers plus ganglia that run from the base of the skull to the coccyx.
AAO:0010791
BAMS:S
@@ -27585,14 +28749,14 @@
sympathetic trunk
http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png
-
+
-
+
FMA-abduced-lr
@@ -28514,7 +29678,7 @@
-
+
Gastric pits are indentations in the stomach which denote entrances to the gastric glands. They are deeper in the pylorus than they are in the other parts of the stomach. The human stomach has several million of these pits.
UBERON:0000425
BTO:0002364
@@ -28532,14 +29696,14 @@
gastric pit
http://upload.wikimedia.org/wikipedia/commons/7/73/Illu_stomach_layers.jpg
-
+
-
+
BTO
@@ -28598,7 +29762,7 @@
-
+
The outermost layer of trophoblast, produced by cytotrophoblast where there is direct contact with maternal decidua rather than blood. The EVT cells travel into the decidua, reacting with NK cells and invading maternal blood vessels feeding the placenta, softening the walls and replacing the lining with fetal tissue, a process called conversion.
BTO:0002366
FMA:86561
@@ -28608,14 +29772,14 @@
UBERON:0000426
extravillous trophoblast
-
+
-
+
BTO
@@ -28897,7 +30061,7 @@
-
+
A group of nuclei located in the medial portion of the ventral thalamic nuclei.
BTO:0002470
FMA:77795
@@ -28909,7 +30073,7 @@
UBERON:0000431
ventral medial complex of thalamus
-
+
@@ -28922,7 +30086,7 @@
-
+
BTO-modified
@@ -28963,7 +30127,7 @@
-
+
A portion of the nucleus of ansa lenticularis located medial to the posterior limb of the internal capsule, along the course of the ansa lenticularis and the inferior thalamic peduncle or as a separate nucleus within the internal capsule adjacent to the medial GLOBUS PALLIDUS (NeuroNames, http://rprcsgi.rprc. washington.edu/neuronames/ (September 28, 1998)). In non-primates, the entopeduncular nucleus is analogous to both the medial globus pallidus and the entopeduncular nucleus of human.
BAMS:EN
BTO:0002475
@@ -28980,14 +30144,14 @@
The term entopeduncular nucleus in human neuroanatomy refers to a portion of the nucleus of the ansa lenticularis described variously as located medial to the posterior limb of the internal capsule ( Riley-1943 ), along the course of the ansa lenticularis and the inferior thalamic peduncle ( Crosby-1962 ), or as a separate nucleus within the internal capsule adjacent to the medial segment of the globus pallidus ( Nomina-1983 ).[NN]
endopeduncular nucleus
-
+
-
+
NN
@@ -29298,8 +30462,8 @@
-
-
+
+
@@ -29313,11 +30477,11 @@
UBERON:0000437
arachnoid barrier layer
-
+
-
+
@@ -29330,13 +30494,13 @@
-
+
cjm
-
+
FMA
@@ -29487,7 +30651,7 @@
-
+
@@ -29508,7 +30672,7 @@
-
+
@@ -29576,7 +30740,7 @@
-
+
@@ -29597,7 +30761,7 @@
-
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-
-
-
-
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+
+
+
-
-
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+
-
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+
Any of several small branches of the internal carotid artery that supply the trigeminal ganglion and the walls of the cavernous and petrosal sinuses.
@@ -30453,9 +31617,9 @@
-
-
-
+
+
+
The paired glands located slightly posterior and to the left and right of the opening of the vagina in the superficial perineal pouch in females; they secrete mucus to lubricate the vagina and are homologous to bulbourethral (Cowper's) glands in males.
resolve difference in WP vs MP, superficial vs deep perineal pouch
@@ -30482,15 +31646,15 @@
major vestibular gland
-
+
-
+
-
+
@@ -30503,19 +31667,19 @@
-
+
FMA-abduced-lr
-
+
Wikipedia
-
+
Wikipedia
@@ -30690,7 +31854,7 @@
-
+
@@ -30732,14 +31896,14 @@
organism substance
-
+
-
+
this relationship may be too strong and may be weakened in future
@@ -32095,7 +33259,7 @@
-
+
@@ -32136,7 +33300,7 @@
basal lamina of epithelium
https://upload.wikimedia.org/wikipedia/commons/6/65/Basal_lamina.jpg
-
+
@@ -32149,7 +33313,7 @@
-
+
FMA
@@ -32238,7 +33402,7 @@
-
+
@@ -32282,14 +33446,14 @@
epithelium
https://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg
-
+
-
+
http://palaeos.com/metazoa/porifera/homoscleromorpha.html
@@ -32816,7 +33980,7 @@
-
+
The ileocecal valve is a sphincter muscle situated at the junction of the small intestine (ileum) and the large intestine. Its critical function is to limit the reflux of colonic contents into the ileum.
FMA:15973
@@ -32837,7 +34001,7 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb
-
+
@@ -32850,7 +34014,7 @@
-
+
FMA
@@ -32902,13 +34066,13 @@
-
+
-
-
+
+
A thin muscle connecting the junction between the duodenum, jejunum, and duodenojejunal flexure to connective tissue surrounding the superior mesenteric artery and coeliac artery.
FMA:20509
SCTID:279979000
@@ -32923,11 +34087,11 @@
suspensory ligament of duodenum
http://upload.wikimedia.org/wikipedia/commons/e/ed/Gray1042.png
-
+
-
+
@@ -32940,13 +34104,13 @@
-
+
Obol
-
+
Obol
@@ -33000,8 +34164,8 @@
-
-
+
+
A muscle that arises from the lower half of the ligamentum nuchæ, from the spinous process of the seventh cervical vertebra, and from the spinous processes of the upper three or four thoracic vertebræ and inserts the mastoid process of the temporal bone, and into the rough surface on the occipital bone just below the lateral third of the superior nuchal line[WP,modified].
Extend, rotate, and laterally flex the head
FMA:22653
@@ -33014,11 +34178,11 @@
splenius capitis
http://upload.wikimedia.org/wikipedia/commons/5/51/Splenius.png
-
+
-
+
@@ -33031,14 +34195,14 @@
-
+
Ligamentum nuchae spinous process of C7-T6
dbpedia
-
+
Wikipedia:Mastoid_process
@@ -33557,7 +34721,7 @@
-
+
@@ -33594,14 +34758,14 @@
abdomen
-
+
-
+
MA
@@ -34009,7 +35173,7 @@
-
+
Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue.
Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO]
The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]
@@ -34047,14 +35211,14 @@
ectoderm
http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png
-
+
-
+
Bgee:AN
@@ -34113,7 +35277,7 @@
-
+
Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut.
The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG]
endodermal
@@ -34150,14 +35314,14 @@
http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png
http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png
-
+
-
+
Bgee:AN
@@ -34208,7 +35372,7 @@
-
+
The middle germ layer of the embryo, between the endoderm and ectoderm.
Primary germ layer that is the middle of the embryonic germ layers.[AAO]
@@ -34253,7 +35417,7 @@
mesoderm
http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png
-
+
@@ -34266,7 +35430,7 @@
-
+
Bgee:AN
@@ -34638,7 +35802,7 @@
-
+
@@ -34684,7 +35848,7 @@
proctodeum
https://github.com/obophenotype/uberon/issues/685
-
+
@@ -34697,7 +35861,7 @@
-
+
EHDAA2
@@ -35138,7 +36302,7 @@
-
+
@@ -35185,14 +36349,14 @@
posterior commissure
http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png
-
+
-
+
FMA
@@ -35295,7 +36459,7 @@
-
+
One of the parts of a holometabolous insect larva that will become a portion of the outside of the adult insect during the pupal transformation.
BTO:0004658
FBbt:00001761
@@ -35310,7 +36474,7 @@
Though inaginal discs are sometimes described as “epithelial sacs”, we do not classify them as such, because an “epithelial sac” is defined in Uberon as being a single epithelium, whereas imaginal discs are made of several epithelia with distinct properties.
imaginal disc
-
+
@@ -35323,7 +36487,7 @@
-
+
Wikipedia
@@ -35381,7 +36545,7 @@
-
+
@@ -35396,6 +36560,7 @@
Cranial nerve fiber tract which is comprised of retinal ganglion cell axons running posterior medially towards the optic chiasm, at which some of the axons cross the midline and after which the structure is termed the optic tract. Transmits visual information from the retina to the brain[ZFA].
Do not classify under 'cranial nerve', as this is not a true nerve - should be classified as evaginated sensory afferent[ISBN:0471888893]
+
A collection of nerve cells that project visual information from the eyes to the brain. (Source: BioGlossary, www.Biology-Text.com)[TAO]
Fibrous, somatic sensory element covered by a fibrous connective-tissue sheath and is continuous with the layer of nerve cells on the inner surface of the eye.[AAO]
(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup (reference 1); The (optic) stalk persists as the optic nerve (reference 2).[well established][VHOG]
@@ -35442,19 +36607,20 @@
optic
UBERON:0000941
+
cranial nerve II
-
+
-
+
EHDAA2
@@ -35585,7 +36751,7 @@
-
+
The frontal nerve is the largest branch of the ophthalmic, and may be regarded, both from its size and direction, as the continuation of the nerve. It enters the orbit through the supraorbital foramen, and runs forward between the Levator palpebræ superioris and the periosteum. Midway between the apex and base of the orbit it divides into two branches, supratrochlear nerve and supraorbital nerve. [WP,unvetted].
FMA:52638
@@ -35602,14 +36768,14 @@
frontal nerve (branch of ophthalmic)
http://upload.wikimedia.org/wikipedia/commons/4/45/Gray787.png
-
+
-
+
FMA
@@ -35687,8 +36853,8 @@
-
-
+
+
@@ -35744,11 +36910,11 @@
stomach
https://upload.wikimedia.org/wikipedia/commons/e/e0/Stomach_diagram.svg
-
+
-
+
@@ -35767,14 +36933,14 @@
-
+
absent in lampreys and hagfishes
ISBN:0073040584
-
+
ISBN:0486692132
@@ -35868,7 +37034,7 @@
-
+
A membranous fold of the heart that prevents reflux of fluid.
@@ -35905,14 +37071,14 @@
cardiac valve
-
+
-
+
PMID:15797462
@@ -35964,7 +37130,7 @@
-
+
@@ -36013,7 +37179,7 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb
https://upload.wikimedia.org/wikipedia/commons/9/91/Aorta_scheme.jpg
-
+
@@ -36026,7 +37192,7 @@
-
+
EHDAA2
@@ -36106,7 +37272,7 @@
-
+
@@ -36182,14 +37348,14 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.3/assets/3d-vh-f-heart.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.3/assets/3d-vh-m-heart.glb
-
+
-
+
MA
@@ -36386,7 +37552,7 @@
-
+
The most superficial muscle on the medial side of the thigh. It is thin and flattened, broad above, narrow and tapering below. It arises by a thin aponeurosis from the anterior margins of the lower half of the symphysis pubis and the upper half of the pubic arch.
AAO has minor and major gracilis, which merge together, attaching the pelvic rim to the tibiofibula - this could be grouped with the mammalian gracilis at some level; note the current insertion site is 'tibia' which would be modified for amphibian tibiafibula
@@ -36409,7 +37575,7 @@
gracilis
http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG
-
+
@@ -36422,7 +37588,7 @@
-
+
pes anserinus
dbpedia
@@ -36576,7 +37742,7 @@
-
+
@@ -36601,7 +37767,7 @@
-
+
The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP].
requires review for applicability to invertebrate structures, e.g. synganglion
@@ -36664,11 +37830,11 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb
-
+
-
+
@@ -36681,13 +37847,13 @@
-
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FMA
-
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Bgee:AN
@@ -36788,9 +37954,9 @@
-
-
-
+
+
+
@@ -36862,15 +38028,15 @@
http://upload.wikimedia.org/wikipedia/commons/7/7b/Cerebral_Cortex_location.jpg
http://upload.wikimedia.org/wikipedia/commons/9/9a/Brainmaps-macaque-hippocampus.jpg
-
+
-
+
-
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@@ -36883,21 +38049,21 @@
-
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GO
ISBN:0471888893
-
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FMA
MA
-
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Wikipedia
@@ -37465,9 +38631,9 @@
-
-
-
+
+
+
@@ -37492,7 +38658,7 @@
-
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@@ -37548,44 +38714,44 @@
cornea
http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg
-
+
-
+
-
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-
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-
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MA
-
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MA
-
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FMA-isa
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definitional
@@ -37775,10 +38941,10 @@
-
-
-
-
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+
The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.
@@ -37829,44 +38995,44 @@
retina
http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png
-
+
-
+
-
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-
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FMA
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FMA
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FMA
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EHDAA2
@@ -38037,8 +39203,8 @@
-
-
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+
@@ -38074,24 +39240,24 @@
eye
-
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-
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PMID:21062451
-
+
PMID:21062451
@@ -38344,8 +39510,8 @@
-
-
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+
@@ -38401,11 +39567,11 @@
sternum
http://upload.wikimedia.org/wikipedia/commons/1/12/Illu_thoracic_cage.jpg
-
+
-
+
@@ -38418,13 +39584,13 @@
-
+
FMA
-
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ISBN:0073040584
@@ -38512,7 +39678,7 @@
-
+
@@ -38553,14 +39719,14 @@
humerus
http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg
-
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-
+
definitional
@@ -38634,7 +39800,7 @@
-
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-
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@@ -38714,14 +39880,14 @@
pleura
http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png
-
+
-
+
https://github.com/obophenotype/uberon/issues/86
@@ -38939,7 +40105,7 @@
-
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@@ -38970,14 +40136,14 @@
trochanter
-
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-
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MA
@@ -39034,7 +40200,7 @@
-
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@@ -39082,7 +40248,7 @@
femur
http://upload.wikimedia.org/wikipedia/commons/7/73/Gray252.png
-
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@@ -39095,7 +40261,7 @@
-
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definitional
@@ -39331,7 +40497,7 @@
-
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@@ -39357,14 +40523,14 @@
metatarsus region
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PHENOSCAPE:ni
@@ -39503,7 +40669,7 @@
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@@ -39524,7 +40690,7 @@
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@@ -39704,14 +40870,14 @@
pons
http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png
-
+
-
+
neuronames
@@ -39780,8 +40946,8 @@
-
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+
An intromittent organ in certain biologically male organisms. In placental mammals, this also serves as the organ of urination.
penile
phallic
@@ -39817,11 +40983,11 @@
penis
http://upload.wikimedia.org/wikipedia/commons/8/87/Labelled_flaccid_penis.jpg
-
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-
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-
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Wikipedia
-
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EHDAA2
@@ -40809,8 +41975,8 @@
-
-
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+
@@ -40852,11 +42018,11 @@
http://upload.wikimedia.org/wikipedia/commons/1/1b/Illu_repdt_female.jpg
http://upload.wikimedia.org/wikipedia/commons/a/a4/Vaginal_opening_-_english_description.jpg
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FMA
-
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Wikipedia
@@ -41337,7 +42503,7 @@
-
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@@ -41407,14 +42573,14 @@
vas deferens
http://upload.wikimedia.org/wikipedia/commons/d/d1/Male_anatomy_en.svg
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-
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FMA
@@ -41546,7 +42712,7 @@
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Tough but flexible, non-mineral outer coverings of an organism, or parts of an organism, that provide protection. Cuticles are non-homologous, differing in their origin, structure and chemical composition[WP].
cuticular
@@ -41562,14 +42728,14 @@
EDITOR_NOTE TODO - check cuticle vs exoskeleton. Note that GO has a very generic definition of cuticle. See also arthropod-anatomy ontology. Note in ncit Cuticle is a plant part
cuticle
-
+
-
+
Rieger - Evolution of the Cuticle in the Lower Eumetazoa
@@ -42483,8 +43649,8 @@
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+
The head of the radius has a cylindrical form, and on its upper surface is a shallow cup or fovea for articulation with the capitulum (or capitellum) of the humerus. The circumference of the head is smooth; it is broad medially where it articulates with the radial notch of the ulna, narrow in the rest of its extent, which is embraced by the annular ligament. The deepest point in the fovea is not axi-symmetric with the long axis of the radius, creating a cam effect during pronation and supination[WP].
FMA:33773
SCTID:181941003
@@ -42498,24 +43664,24 @@
head of radius
http://upload.wikimedia.org/wikipedia/commons/4/47/Gray214.png
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FMA
-
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FMA
@@ -42832,7 +43998,7 @@
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@@ -42846,6 +44012,7 @@
The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organism, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO].
+
A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS). (Source: BioGlossary, www.Biology-Text.com)[TAO]
Anatomical system consisting of nerve bodies and nerve fibers which regulate the response of the body to external and internal stimuli.[AAO]
Nervous systems evolved in the ancestor of Eumetazoa.[well established][VHOG]
@@ -42885,6 +44052,7 @@
UBERON:0001016
+
@@ -42892,14 +44060,14 @@
http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg
http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png
-
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Bgee:AN
@@ -42993,7 +44161,7 @@
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The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord.
@@ -43042,7 +44210,7 @@
central nervous system
-
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@@ -43056,7 +44224,7 @@
-
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Bgee:AN
@@ -43628,7 +44796,7 @@
-
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A nerve that transmits from sensory receptors on the surface of the body to the central nervous system.
AEO:0000201
EHDAA2:0003200
@@ -43643,14 +44811,14 @@
sensory nerve
-
+
-
+
AEO
@@ -43922,6 +45090,7 @@
Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information.
+
An early step in the evolution of neural crest, therefore, may have been the origin of a specific dorsal neural cell population contributing to sensory processing; this would predate the divergence of the amphioxus and vertebrate lineages.[well established][VHOG]
note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
AAO:0000555
@@ -43953,6 +45122,7 @@
set of sense organs
UBERON:0001032
+
sensory system
@@ -44067,6 +45237,7 @@
The sensory system for the sense of taste.
+
The sensory system for the sense of taste[NLXANAT:090803].
The sensory system used for the sense of taste.[AAO]
gustatory
@@ -44090,6 +45261,7 @@
uberon
UBERON:0001033
+
@@ -44255,8 +45427,8 @@
-
-
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+
@@ -44311,11 +45483,11 @@
strand of hair
http://upload.wikimedia.org/wikipedia/commons/2/25/Gray945.png
-
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-
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-
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FMA
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FMA
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-
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+
A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP].
consider splitting class
One of the extraembryonic fetal membranes that balloons out from the fetal midgut. [TFD][VHOG]
@@ -44450,11 +45622,11 @@
yolk sac
http://upload.wikimedia.org/wikipedia/commons/1/17/Gray22.png
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-
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-
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ISBN:0073040584
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ISBN:0073040584
@@ -44638,7 +45810,7 @@
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A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED].
A funnel-shaped fibromuscular tube that conducts food to the ESOPHAGUS, and air to the LARYNYX and LUNGS. It is located posterior to the NASAL CAVITY; ORAL CAVITY; and LARYNX, and extends from the SKULL BASE to the inferior border of the CRICOID CARTILAGE anteriorly and to the inferior border of the C6 vertebra posteriorly. It is divided into the NASOPHARYNX; OROPHARYNX; and HYPOPHARYNX (laryngopharynx)[MESH:A03.867].
Anatomical cavity bounded by the derivatives of the branchial arches.[AAO]
@@ -44680,14 +45852,14 @@
Consider generalizing to deuterostome pharynx
chordate pharynx
-
+
-
+
EHDAA2
@@ -44939,6 +46111,7 @@
Saliva-secreting exocrine glands of the oral cavity[GO].
currently we define saliva and salivary glands very generally in functional terms but it may be more appropriate to split this class. From WP: In most vertebrates, saliva does not contain any enzymes, consisting of mucus and water only, and its primary function is to moisten food while eating. As a result, true salivary glands are rarely found in fish or aquatic tetrapods, although there are often individual mucus-secreting cells. Amphibians have a single salivary gland, the intermaxillary gland, located in the forward part of the palate. Reptiles and birds normally have only very small glands on the lips, palate, and base of the mouth, although there are some birds with large glands, which produce a sticky saliva that helps in nest-building. The distinct parotid, submandibular, and sublingual glands are only developed in mammals.
+
A gland that produces the saliva. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-25, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG]
In air-feeding animals, the lack of water column to lubricate the food has been compensated for by the evolution of the salivary glands. These glands are present only in amniotes and are controlled by the parasympathetic system.[well established][VHOG]
The salivary glands in mammals are exocrine glands, glands with ducts, that produce saliva. They also secrete amylase, an enzyme that breaks down starch into maltose. In other organisms such as insects, salivary glands are often used to produce biologically important proteins like silk or glues, and fly salivary glands contain polytene chromosomes that have been useful in genetic research. The salivary glands of some species are modified to produce enzymes; salivary amylase is found in many, but by no means all, bird and mammal species (including humans, as noted above). Furthermore, the venom glands of poisonous snakes, Gila monsters, and some shrews, are modified salivary glands
@@ -44968,6 +46141,7 @@
UBERON:0001044
+
@@ -45130,7 +46304,7 @@
-
+
@@ -45167,14 +46341,14 @@
hindgut
http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png
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-
+
Wikipedia
@@ -45580,15 +46754,15 @@
-
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@@ -45642,15 +46816,15 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb
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MA
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EHDAA2
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ISBN:0073040584
@@ -45715,7 +46889,7 @@
-
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A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system.
currently intended for invert structure; alt definitions include: organs in which intimate relationships between axons and terminal blood vessels are established
BTO:0002106
@@ -45731,14 +46905,14 @@
brain areas from which substances enter blood for example, the neurohypophysis from which oxytocin and vasopressin enter blood.
arthropod neurohemal organ
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-
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BTO
@@ -45846,7 +47020,7 @@
-
+
@@ -45866,14 +47040,14 @@
will be ceded to arthropod anatomy ontology
corpus cardiacum
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-
+
BTO-modified
@@ -45904,8 +47078,8 @@
-
-
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+
One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone)[BTO].
In Lepidoptera species, the corpus allatum acts as a release site for prothoracicotropic hormone which is generated by the brain
In many Diptera species, the corpus allatum is fused with the corpus cardiacum, forming Weismann's ring
@@ -45923,11 +47097,11 @@
will be ceded to arthropod anatomy ontology
corpus allatum
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-
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BTO-modified
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Wikipedia
@@ -45983,9 +47157,9 @@
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Prominent lobed neuropils found in annelids and all arthropods except crustaceans. They are thought to be involved in olfactory associative learning and memory[MESH] Mushroom body neuropils are divided into calyces, pedunculus, and its subsequent lobes. In Drosophila these are the alpha, beta, and gamma lobes.
@@ -46007,34 +47181,34 @@
mushroom body
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-
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-
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annelids and arthropods
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Wikipedia
-
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Wikipedia
@@ -46077,7 +47251,7 @@
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@@ -46096,14 +47270,14 @@
will be ceded to arthropod anatomy ontology
pars intercerebralis
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-
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FBbt
@@ -46335,7 +47509,7 @@
-
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@@ -46382,7 +47556,7 @@
ventral pancreatic duct
http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png
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@@ -46395,7 +47569,7 @@
-
+
EHDAA2
@@ -46758,7 +47932,7 @@
-
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A zone of skin that is part of a back [Automatically generated definition].
EMAPA:36392
FMA:10462
@@ -46775,7 +47949,7 @@
EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region
skin of back
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@@ -46788,7 +47962,7 @@
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MA
@@ -46829,7 +48003,7 @@
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The head of pancreas is a portion of the pancreas that is lodged within the curve of the duodenum, and is flattened anteriorly (from before). The other parts of the pancreas are the body and the tail. Its upper border is overlapped by the superior part of the duodenum and its lower overlaps the horizontal part; its right and left borders overlap in front, and insinuate themselves behind, the descending and ascending parts of the duodenum respectively. [WP,unvetted].
Hagfish and lampreys may have one or more endocrine buds - and later the vertebrate pancreas develop as independent ventral and dorsal buds that eventually fuse to become one organ.[well established][VHOG]
@@ -46855,14 +48029,14 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-female/v1.3/assets/3d-vh-f-pancreas.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.3/assets/3d-vh-m-pancreas.glb
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-
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EHDAA2-inferred
WP
@@ -46902,9 +48076,9 @@
-
-
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+
A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP].
not homologous to the external carotid of zebrafish (Goodrich, 1958) - http://zfish.nichd.nih.gov/zfatlas/Intro%20Page/comparative.html; check XAO
@@ -46937,15 +48111,15 @@
https://sourceforge.net/tracker/?func=detail&aid=3486863&group_id=76834&atid=1127722
http://upload.wikimedia.org/wikipedia/commons/1/13/External_carotid_a.gif
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FMA
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EHDAA2
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FMA
@@ -47080,7 +48254,7 @@
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@@ -47095,7 +48269,7 @@
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@@ -47274,14 +48448,14 @@
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pericardial cavity
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FMA
-
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Wikipedia
@@ -48039,7 +49213,7 @@
-
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@@ -48071,14 +49245,14 @@
endocardium of ventricle
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https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships
@@ -48216,7 +49390,7 @@
-
+
@@ -48244,14 +49418,14 @@
myocardium of ventricle
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https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships
@@ -48732,9 +49906,9 @@
-
-
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+
Skeletal element within the mouth (or in some species, upper part of the digestive tract) that is composed of dentine and is used in procuring or masticating food.
@@ -48777,34 +49951,34 @@
calcareous tooth
http://upload.wikimedia.org/wikipedia/commons/1/14/Teeth_by_David_Shankbone.jpg
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-
+
-
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XAO-modified
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ZFA-modified
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cjm
@@ -48967,7 +50141,7 @@
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The second vertebral bone in the vertebral column.
Vertebra that is posteriorly adjacent to vertebra 1.[TAO]
@@ -49003,14 +50177,14 @@
vertebral bone 2
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FMA
@@ -49540,8 +50714,8 @@
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The Pectoralis minor is a thin, triangular muscle, situated at the upper part of the chest, beneath the Pectoralis major. [WP,unvetted].
EHDAA2:0001425
@@ -49567,11 +50741,11 @@
pectoralis minor
https://upload.wikimedia.org/wikipedia/commons/5/5d/Pectoralis_minor.png
-
+
-
+
@@ -49584,14 +50758,14 @@
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third to fifth ribs near their costal cartilages
dbpedia
-
+
medial border and superior surface of the coracoid process of the scapula
dbpedia
@@ -49633,7 +50807,7 @@
-
+
The external jugular vein receives the greater part of the blood from the exterior of the cranium and the deep parts of the face, being formed by the junction of the posterior division of the posterior facial with the posterior auricular vein. [WP,unvetted].
Vein which collects blood from the muscles of the head and tongue and the thyroid gland.[AAO]
@@ -49659,14 +50833,14 @@
external jugular vein
http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png
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+
-
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FMA
@@ -49806,8 +50980,8 @@
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A thin musculomebranous barrier that separates the abdominal and thoracic cavities. Often used for breathing control.
The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs[GO].
@@ -49847,24 +51021,24 @@
diaphragm
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-
+
-
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PMID:23586979
-
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definitional
@@ -49926,8 +51100,8 @@
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The anterior jugular vein begins near the hyoid bone by the confluence of several superficial veins from the submaxillary region. It descends between the median line and the anterior border of the Sternocleidomastoideus, and, at the lower part of the neck, passes beneath that muscle to open into the termination of the external jugular, or, in some instances, into the subclavian vein. It varies considerably in size, bearing usually an inverse proportion to the external jugular; most frequently there are two anterior jugulars, a right and left; but sometimes only one. Its tributaries are some laryngeal veins, and occasionally a small thyroid vein. Just above the sternum the two anterior jugular veins communicate by a transverse trunk, the venous jugular arch, which receive tributaries from the inferior thyroid veins; each also communicates with the internal jugular. There are no valves in this vein. [WP,unvetted].
@@ -49947,24 +51121,24 @@
anterior jugular vein
http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray558.png
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-
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-
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Wikipedia
-
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FMA
Wikipedia
@@ -50014,8 +51188,8 @@
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A paired dermal or endochondral bone that is part of the pectoral girdle. The clavicle may be in contact with the interclavicle or coracoid and forms an attachment site for pectoral musculature. [PHENOSCAPE:ad].
Slender, paired bones of intramembranous origin that invest the anterior margins of the procoracoids.[AAO]
@@ -50051,11 +51225,11 @@
clavicle bone
https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg
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-
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@@ -50068,14 +51242,14 @@
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mah
ISBN:978-0-12-319060-4
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from secondary cartilage of fusion
ISBN:978-0-12-319060-4
@@ -50151,8 +51325,8 @@
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+
A superficial vein of the upper limb that communicates with the basilic vein via the median cubital vein at the elbow and is located in the superficial fascia along the anterolateral surface of the biceps brachii muscle. Superiorly the cephalic vein passes between the deltoid and pectoralis major muscles and through the deltopectoral triangle, where it empties into the axillary vein. It is often visible through the skin, and its location in the deltopectoral groove is fairly consistent, making this site a good candidate for cannulation. It is often referred to as the 'House-man's Friend' for this reason and is generally a good place for cannulaton when a large bore cannula needs to be sited. [WP,modified].
EMAPA:25075
@@ -50173,24 +51347,24 @@
cephalic vein
http://upload.wikimedia.org/wikipedia/commons/b/ba/Gray574.png
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FMA/obol
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FMA/obol
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The sternohyoid muscle is a thin, narrow muscle attaching the hyoid bone to the sternum, one of the paired strap muscles of the infrahyoid muscles serving to depress the hyoid bone. It is innervated by the ansa cervicalis. The muscle arises from the posterior border of the medial end of the clavicle, the posterior sternoclavicular ligament, and the upper and posterior part of the manubrium sterni. Passing upward and medially, it is inserted by short tendinous fibers into the lower border of the body of the hyoid bone. [WP,unvetted].
The sternohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the hyoid appratus and the sternum.[FEED]
@@ -50256,15 +51430,15 @@
sternohyoid muscle
https://upload.wikimedia.org/wikipedia/commons/6/67/Sternohyoid_muscle.PNG
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inferred
dbpedia
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manubrium of sternum
dbpedia
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dbpedia
@@ -50359,8 +51533,8 @@
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The omohyoid muscle is a muscle at the front of the neck that consists of two bellies separated by an intermediate tendon. It belongs to the group of infrahyoid muscles. [WP,unvetted].
The omohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the hyoid appratus and the scapula.[FEED]
@@ -50383,11 +51557,11 @@
omohyoid muscle
http://upload.wikimedia.org/wikipedia/commons/b/b0/Gray1210.png
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inferred
dbpedia
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dbpedia
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The Sternothyreoideus (or Sternothyroid muscle) is shorter and wider than the Sternohyoideus, beneath which it is situated. It arises from the posterior surface of the manubrium sterni, below the origin of the Sternohyoideus, and from the edge of the cartilage of the first rib, and sometimes that of the second rib, it is inserted into the oblique line on the lamina of the thyroid cartilage. This muscle is in close contact with its fellow at the lower part of the neck, but diverges somewhat as it ascends; it is occasionally traversed by a transverse or oblique tendinous inscription. [WP,unvetted].
The sternothyroid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the thyroid cartilage and the sternum.[FEED]
@@ -50489,15 +51663,15 @@
sternothyroid muscle
http://upload.wikimedia.org/wikipedia/commons/1/10/Sternothyroideus.png
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inferred
dbpedia
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dbpedia
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dbpedia
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The thyrohyoid muscle is a small, quadrilateral muscle appearing like an upward continuation of the Sternothyreoideus. It belongs to the infrahyoid muscles group. It arises from the oblique line on the lamina of the thyroid cartilage, and is inserted into the lower border of the greater cornu of the hyoid bone. [WP,unvetted].
The thyrohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by C1 and Cranial Nerve XII ; it attaches to the thyroid cartilage and the hyoid apparatus.[FEED]
@@ -50610,15 +51784,15 @@
thyrohyoid muscle
https://upload.wikimedia.org/wikipedia/commons/a/aa/Thyrohyoid_muscle.PNG
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first cervical nerve via hypoglossal nerve
dbpedia
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first cervical nerve via hypoglossal nerve
dbpedia
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dbpedia
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The respiratory muscles that arise from the lower border of one rib and insert into the upper border of the adjoining rib.
Inspiration by active expansion of the thorax evolved later, in the ancestor of reptiles, birds, and mammals. This was powered originally by the intercostal muscles (as in lizards or crocodilians) and later (in mammals only) by a muscular diaphragm.[well established][VHOG]
BTO:0005281
@@ -50759,45 +51928,45 @@
intercostal muscle
http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png
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dbpedia
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EHDAA2
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ribs 1-11
dbpedia
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ribs 2-12
dbpedia
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The latissimus dorsi is the larger, flat, dorso-lateral muscle on the trunk, posterior to the arm, and partly covered by the trapezius on its median dorsal region. [WP,unvetted].
In humans it inserts along a roughened line deep in the groove. In other mammals (most, I believe) it is an actual projection, the latissimus dorsi process [FEED:rd] [https://github.com/obophenotype/uberon/issues/1192]
@@ -50883,66 +52052,66 @@
latissimus dorsi muscle
https://upload.wikimedia.org/wikipedia/commons/7/7d/Latissimus_dorsi.png
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EHDAA2
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EHDAA2
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spinous processes of thoracic T7-T12 thoracolumbar fascia iliac crest and inferior 3 or 4 ribs inferior angle of scapula
dbpedia
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floor of intertubercular groove of the humerus
dbpedia
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dbpedia
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dbpedia
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The caudate lobe (posterior hepatic segment I, Spigelian lobe) is situated upon the postero-superior surface of the liver on the right lobe of the liver, opposite the tenth and eleventh thoracic vertebrae. It is bounded on the left side by the physiological division of the liver called the ligamentum venosum. It is bounded, below, by the porta; on the right, by the fossa for the inferior vena cava; and, on the left, by the fossa for the ductus venosus. It looks backward, being nearly vertical in position; it is longer from above downward than from side to side, and is somewhat concave in the transverse direction. The caudate process is a small elevation of the hepatic substance extending obliquely and laterally, from the lower extremity of the caudate lobe to the under surface of the right lobe. It is situated behind the porta, and separates the fossa for the gall-bladder from the commencement of the fossa for the inferior vena cava. Budd-Chiari syndrome, caused by occlusion of hepatic venous outflow, can lead to hypertrophy of the caudate lobe due to its own caval anastomosis that allows for continued function of this lobe of the liver. [WP,unvetted].
Check left vs right in mouse and human
The portion of the right lobe of the liver between the fissure of the ligamentum venosum and the bare area of the liver. It ends into the superior recess of the lesser peritoneal sac. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG]
@@ -51301,7 +52470,7 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.2/assets/3d-vh-f-liver.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.2/assets/3d-vh-m-liver.glb
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FMA
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A lobe of tissue that is part of a thyroid gland.
Thus, a thyroid capable of forming iodotyrosines and iodothyronines is present in all vertebrates. (...) Certain morphologic changes occur after the biochemical evolution of the thyroid has ceased. In the adult lamprey and in most bony fishes, the gland is not encapsulated. (...) In cartilaginous fish, the thyroid is encapsulated. In the higher vertebrate forms, the thyroid is a one- or two-lobed encapsulated structure.[well established][VHOG]
EHDAA2:0002032
@@ -51440,14 +52609,14 @@
lobe of thyroid gland
http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png
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FMA-abduced-lr
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The Longus colli muscle is a muscle of the human body. The Longus colli is situated on the anterior surface of the vertebral column, between the atlas and the third thoracic vertebra. It is broad in the middle, narrow and pointed at either end, and consists of three portions, a superior oblique, an inferior oblique, and a vertical. The superior oblique portion arises from the anterior tubercles of the transverse processes of the third, fourth, and fifth cervical vertebræ and, ascending obliquely with a medial inclination, is inserted by a narrow tendon into the tubercle on the anterior arch of the atlas. The inferior oblique portion, the smallest part of the muscle, arises from the front of the bodies of the first two or three thoracic vertebræ; and, ascending obliquely in a lateral direction, is inserted into the anterior tubercles of the transverse processes of the fifth and sixth cervical vertebræ. The vertical portion arises, below, from the front of the bodies of the upper three thoracic and lower three cervical vertebræ, and is inserted into the front of the bodies of the second, third, and fourth cervical vertebræ. [WP,unvetted].
EMAPA:37654
FMA:13370
@@ -51645,35 +52814,35 @@
longus colli muscle
https://upload.wikimedia.org/wikipedia/commons/a/a6/Longus_colli.png
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FMA-modified
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Transverse processes of C-5 to T-3
dbpedia
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dbpedia
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The Scalenus medius, the largest and longest of the three scalene muscles, arises from the posterior tubercles of the transverse processes of the lower six cervical vertebræ. It descendes along the side of the vertebral column to insert by a broad attachment into the upper surface of the first rib, between the tubercle and the subclavian groove. The brachial plexus and the subclavian artery pass anterior to it. Because it elevates the upper ribs, the middle scalene muscle is also one of the accessory muscles of respiration. [WP,unvetted].
EMAPA:37738
@@ -51751,35 +52920,35 @@
scalenus medius
https://upload.wikimedia.org/wikipedia/commons/f/fa/Scalenus_medius.png
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Ventral rami of the third to eighth cervical spinal nerves
dbpedia
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dbpedia
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dbpedia
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The Scalenus posterior (Scalenus posticus), the smallest and most deeply seated of the three Scaleni, arises, by two or three separate tendons, from the posterior tubercles of the transverse processes of the lower two or three cervical vertebræ, and is inserted by a thin tendon into the outer surface of the second rib, behind the attachment of the serratus ventralis. It is occasionally blended with the Scalenus medius. [WP,unvetted].
EMAPA:37737
@@ -51843,14 +53012,14 @@
scalenus posterior
https://upload.wikimedia.org/wikipedia/commons/f/f3/Scalenus_posterior.png
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transverse processes of C4 - C6
dbpedia
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The serratus ventralis is a muscle that originates on the surface of the upper eight or nine ribs at the side of the chest and inserts along the entire anterior length of the medial border of the scapula. [WP,unvetted].
EHDAA2:0001832
@@ -51942,57 +53111,57 @@
serratus ventralis
https://upload.wikimedia.org/wikipedia/commons/c/c6/Serratus_anterior.png
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long thoracic nerve
dbpedia
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EHDAA2
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fleshy slips from the outer surface of upper 8 or 9 ribs
dbpedia
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costal aspect of medial margin of the scapula
dbpedia
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dbpedia
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The serratus dorsalis superior is a thin, quadrilateral muscle, situated at the upper and back part of the thorax. It arises by a thin and broad aponeurosis from the lower part of the ligamentum nuchae, from the spinous processes of the seventh cervical and upper two or three thoracic vertebræ and from the supraspinal ligament. Inclining downward and lateralward it becomes muscular, and is inserted, by four fleshy digitations, into the upper borders of the second, third, fourth, and fifth ribs, a little beyond their angles. [WP,unvetted].
EMAPA:37698
FMA:13401
@@ -52060,7 +53229,7 @@
serratus dorsalis superior muscle
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C7 thru T3 in human
dbpedia
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A muscle that originates from the vertebrae and inserts in the ribs.
EMAPA:37697
FMA:13402
@@ -52141,7 +53310,7 @@
serratus dorsalis inferior muscle
https://upload.wikimedia.org/wikipedia/commons/a/aa/Serratus_posterior.PNG
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T11 through L2 in human
dbpedia
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A paired muscle in the superficial layers of the anterior portion of the neck. It acts to flex and rotate the head. It also acts as an accessory muscle of inspiration, along with the scalene muscles of the neck. [WP,unvetted].
TODO: sternocleidomastoid = sternomastoid + Cleidomastoideus. Origin: from manubrium sterni (sterno) and clavicle (cleido) and it's insertion at the mastoid process of the temporal bone.
@@ -52249,25 +53418,25 @@
http://upload.wikimedia.org/wikipedia/commons/6/61/Gray512.png
http://upload.wikimedia.org/wikipedia/commons/f/f9/Gray512.svg
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sensory: cervical plexus
dbpedia
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manubrium sterni medial portion of the clavicle
dbpedia
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The subscapularis is a large triangular muscle which fills the subscapular fossa and inserts into the lesser tubercle of the humerus and the front of the capsule of the shoulder-joint. [WP,unvetted].
EHDAA2:0001943
@@ -52427,34 +53596,34 @@
http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png
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Wikipedia
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EHDAA2
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lesser tubercle of humerus
dbpedia
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vertebral column
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cjm
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The parathyroid gland is an endocrine gland for secretion of parathyroid hormone, usually found as a pair, embedded in the connective tissue capsule on the posterior surface of the thyroid gland. Parathyroid regulates calcium and phosphorous metabolism.
Any one of several small structures, usually four, attached to the dorsal surfaces of the lateral lobes of the thyroid gland. [TFD][VHOG]
Either of the two pairs of small, spherical, encapsulated glands which develop from ventral growths of the third and fourth pharyngeal pouches and are closely associated with the external jugular veins. Calcitonin and parathyroid hormone are secreted by these glands.[AAO]
@@ -52810,24 +53979,24 @@
parathyroid gland
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PMID:16313389
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Wikipedia
@@ -53388,7 +54557,7 @@
-
+
Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri).
AEO:0000111
BTO:0002422
@@ -53413,14 +54582,14 @@
mesothelium
http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg
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+
-
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FMA
@@ -53510,7 +54679,7 @@
-
+
@@ -53529,13 +54698,13 @@
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-
In anatomy, the superior mesenteric vein (SMV) is a blood vessel that drains blood from the small intestine. At its termination behind the neck of the pancreas, the SMV combines with the splenic vein to form the hepatic portal vein. The SMV lies to the right of the similarly named artery, the superior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted].
BTO:0002783
@@ -53559,14 +54728,14 @@
http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png
https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb
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+
-
+
Wikipedia:Vitelline_vein
@@ -53602,7 +54771,7 @@
-
+
A vein that drains the pelvis and lower limbs into the inferior vena cava.
In human anatomy, the common iliac veins are formed by the external iliac veins and internal iliac veins and together, in the abdomen at the level of the fifth lumbar vertebrae, form the inferior vena cava. They drain blood from the pelvis and lower limbs. Both common iliac veins are accompanied along their course by common iliac arteries.
@@ -53625,7 +54794,7 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb
https://upload.wikimedia.org/wikipedia/commons/6/65/Iliac_veins.gif
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@@ -53638,7 +54807,7 @@
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FMA-abduced-lr
@@ -53678,7 +54847,7 @@
-
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@@ -53687,14 +54856,14 @@
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-
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+
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Either of the pair of major vessels which arise from the renal hilus and return blood from the kidneys, suprarenal gland and the ureter to the inferior vena cava.
@@ -53784,7 +54953,7 @@
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@@ -53793,7 +54962,7 @@
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Vein that carries blood away from the liver[ZFA].
todo - add developmental relationships for other taxa
@@ -53966,14 +55135,14 @@
hepatic vein
http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png
-
+
-
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FMA-abduced-lr
@@ -54032,7 +55201,7 @@
-
+
@@ -54060,7 +55229,7 @@
-
+
@@ -54179,7 +55348,7 @@
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The tail of the pancreas, located anatomically left near the hilum of the spleen, is not simply an anatomical distinction. The tail is the only part of the pancreas which contains Pancreatic Polypeptide (PP) cells, which are responsible for secreting pancreatic polypeptide to coordinate exocrine and islet enzyme release. PP cells are found in the tail's periphery. Beta cells and delta cells are found in the central part of the tail as with the rest of the pancreas. The cells described above are located exclusively in the islet cells; their secretions reach exocrine portions of the pancreas via the capillary network surrounding the islet cell populations. [WP,unvetted].
Hagfish and lampreys may have one or more endocrine buds - and later the vertebrate pancreas develop as independent ventral and dorsal buds that eventually fuse to become one organ.[well established][VHOG]
@@ -54593,24 +55762,24 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-female/v1.3/assets/3d-vh-f-pancreas.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.3/assets/3d-vh-m-pancreas.glb
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FMA
-
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EHDAA2
@@ -54688,7 +55857,7 @@
-
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@@ -54724,7 +55893,7 @@
http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg
http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png
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EHDAA2
@@ -54785,15 +55954,15 @@
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@@ -54844,34 +56013,34 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb
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EHDAA2
-
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Wikipedia
-
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Wikipedia
@@ -54961,8 +56130,8 @@
-
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+
A blind-ended tube connected to the cecum, from which it develops embryologically[WP].
@@ -55007,24 +56176,24 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb
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http://orcid.org/0000-0002-1572-1316
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Wikipedia
@@ -55090,7 +56259,7 @@
-
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@@ -55145,7 +56314,7 @@
colon
-
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@@ -55159,7 +56328,7 @@
-
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FMA
@@ -55224,7 +56393,7 @@
-
+
Section of colon which is distal to the cecum and proximal to the transversecolon.[FMA,modified].
in MA, this is a subclass of colon
@@ -55254,7 +56423,7 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb
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@@ -55267,7 +56436,7 @@
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Wikipedia
@@ -55324,7 +56493,7 @@
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The proximal-distal subdivision of colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure. Continuous with the descending colon[BTO,modified].
BTO:0000272
@@ -55352,7 +56521,7 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb
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@@ -55365,7 +56534,7 @@
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Wikipedia
@@ -55409,7 +56578,7 @@
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The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon.
BTO:0000641
@@ -55437,7 +56606,7 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb
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Wikipedia
@@ -55493,7 +56662,7 @@
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The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity.
BTO:0000645
@@ -55525,7 +56694,7 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb
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Wikipedia
@@ -55781,7 +56950,7 @@
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@@ -55818,14 +56987,14 @@
cardia of stomach
https://upload.wikimedia.org/wikipedia/commons/3/33/Illu_stomach.jpg
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ISBN:0073040584
@@ -55981,7 +57150,7 @@
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pyloric antrum
http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg
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Wikipedia
@@ -56551,7 +57720,7 @@
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@@ -56568,7 +57737,7 @@
portal lobule
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MA
MP
@@ -56605,7 +57774,7 @@
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@@ -56631,14 +57800,14 @@
UBERON:0001172
hepatic acinus
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cjm
@@ -56873,10 +58042,10 @@
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common hepatic duct
http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg
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MA
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Wikipedia
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Wikipedia
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definitional
@@ -57211,7 +58380,7 @@
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peritoneal cavity
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Wikipedia
@@ -57319,8 +58488,8 @@
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classified as a cavity in EHDAA2, organ segment in FMA. We hedge and use a union
UBERON:0006299
EHDAA2:0001958
@@ -57339,24 +58508,24 @@
UBERON:0001180
superior recess of lesser sac
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EMAPA
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EHDAA2
@@ -57482,11 +58651,11 @@
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An artery that arises from the celiac artery and supplies the stomach.
@@ -58321,7 +59490,7 @@
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The middle colic artery is a branch of the superior mesenteric artery that mostly supplies the transverse colon. It arises just below the pancreas, and, passing downward and forward between the layers of the transverse mesocolon, divides into two branches: right and left. The right branch anastomoses with the right colic artery The left branch anastomoses with the left colic artery, a branch of the inferior mesenteric artery. The arches thus formed are placed about two fingers' breadth from the transverse colon, to which they distribute branches. [WP,unvetted].
@@ -58636,47 +59805,47 @@
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The Ileocolic Artery is the lowest branch arising from the concavity of the superior mesenteric artery. It passes downward and to the right behind the peritoneum toward the right iliac fossa, where it divides into a superior and an inferior branch; the inferior anastomoses with the end of the superior mesenteric artery, the superior with the right colic artery. Supplies the cecum, ileum, and appendix. [WP,unvetted].
@@ -60245,14 +61414,14 @@
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The protruding lymphoid tissue located on the mucosa of the intestine that is composed of densely packed B cell follicles.
Reptiles have accumulations of lymphocytes in their guts that may be primitive Peyer's patches (Zapata and Solas).
@@ -60280,11 +61449,11 @@
Peyer's patch
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EDITOR_NOTE check this
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PMID:PMID:20181529
@@ -60383,8 +61552,8 @@
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A compound tubular submucosal gland found in that portion of the duodenum which is above the hepatopancreatic sphincter (Sphincter of Oddi). The main function of these glands is to produce a mucus-rich alkaline secretion (containing bicarbonate)[WP].
currently defined as equivalent to any submucosal gland in the duodenum.
Said to be absent outside mammlian (Andrew 1959) but Ziswiler and Farner (1972) noted similar glands at the gastroduodenal junction of some birds
@@ -60410,11 +61579,11 @@
duodenal gland
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FMA, modified
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unclear for Aves
ISBN:9780521617147
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intestinal villus
http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg
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ZFA
@@ -60649,7 +61818,7 @@
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The pancreatic veins consist of several small vessels which drain the body and tail of the pancreas, and open into the trunk of the great pancreatic vein. [WP,unvetted].
see also MA:0002165 ! lieno-pancreatic vein
@@ -60667,14 +61836,14 @@
pancreatic tributary of splenic vein
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FMA/obol
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A blood vessel that drains blood from the large intestine that usually terminates when reaching the splenic vein, which goes on to form the portal vein with the superior mesenteric vein (SMV). Anatomical variations include the IMV draining into the confluence of the SMV and splenic vein and the IMV draining in the SMV. The IMV lies to the right of the similarly name artery, the inferior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted].
BTO:0002782
@@ -60749,14 +61918,14 @@
http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png
https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb
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FMA/obol
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A tributary of the superior mesenteric vein that drains the jejunum.
EMAPA:37160
@@ -60822,7 +61991,7 @@
jejunal vein
http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png
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FMA/obol
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The veins that drain blood from the ileum into the superior mesenteric vein.
EMAPA:37149
@@ -60902,14 +62071,14 @@
ileal vein
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FMA
Wikipedia
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The middle colic vein drains the transverse colon. It is a tributary of the superior mesenteric vein, and follows the path of its corresponding artery, the middle colic artery. [WP,unvetted].
@@ -61013,34 +62182,34 @@
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An abdominal muscle that inserts on the last rib and transverse processes of lumbar vertebrae. It is irregular and quadrilateral in shape, and broader below than above.
EMAPA:18524
FMA:15569
@@ -61114,36 +62283,36 @@
quadratus lumborum
http://upload.wikimedia.org/wikipedia/commons/d/de/Gray1124.png
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Last rib and transverse processes of lumbar vertebrae
dbpedia
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Last rib and transverse processes of lumbar vertebrae
dbpedia
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Last rib and transverse processes of lumbar vertebrae
dbpedia
@@ -61187,7 +62356,7 @@
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The lateral abdominal wall muscle that is deep to the internal oblique.
One of a pair of transverse abdominal muscles that is the anterolateral muscle of the abdomen, lying immediately under the internal abdominal oblique. [TFD][VHOG]
@@ -61224,7 +62393,7 @@
transversus abdominis muscle
http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_trunk_muscles.jpg
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dbpedia
@@ -61480,14 +62649,14 @@
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renal pelvis
https://upload.wikimedia.org/wikipedia/commons/c/c0/Illu_kidney2.jpg
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-
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MA
-
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FMA
@@ -61602,7 +62771,7 @@
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https://cdn.humanatlas.io/digital-objects/ref-organ/kidney-male-right/v1.3/assets/3d-vh-m-kidney-r.glb
https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg
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FMA
@@ -61840,7 +63009,7 @@
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renal corpuscle
https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg
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MA
ZFA
@@ -61996,7 +63165,7 @@
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glomerular capsule
http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg
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Wikipedia
@@ -62148,11 +63317,11 @@
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nephron tubule
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GO
MA
ZFA
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ZFA
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checkme
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collecting duct of renal tubule
-
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checkme
GO
@@ -62677,9 +63846,9 @@
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adrenal medulla
http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png
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FMA
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FMA
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Wikipedia
@@ -63827,7 +64996,7 @@
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interlobular bile duct
-
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FMA
MA
MP
@@ -63919,7 +65088,7 @@
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https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.2/assets/3d-vh-f-liver.glb
https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.2/assets/3d-vh-m-liver.glb
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MA
@@ -64098,8 +65267,8 @@
-
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spleen lymphoid follicle
-
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CL:tm
MA
-
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FMA
@@ -64397,7 +65566,7 @@
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An adventitia that is part of a ureter.
EMAPA:28114
FMA:15892
@@ -64413,14 +65582,14 @@
UBERON:0001252
adventitia of ureter
-
+
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+
https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships
@@ -64464,7 +65633,7 @@
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A lamina propria that is part of a ureter [Automatically generated definition].
EMAPA:28841
@@ -64481,14 +65650,14 @@
lamina propria of ureter
-
+
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+
true
https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships
@@ -64598,8 +65767,8 @@
-
-
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+
Distensible musculomembranous organ situated in the anterior part of the pelvic cavity in which urine collects before excretion[MP].
@@ -64646,11 +65815,11 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/urinary-bladder-male/v1.2/assets/3d-vh-m-urinary-bladder.glb
https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg
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@@ -64663,13 +65832,13 @@
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FMA
-
+
upper part of UG sinus
@@ -65167,7 +66336,7 @@
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A serous membrane that is part of a urinary bladder [Automatically generated definition].
TODO - check serosa/peritoneum
EMAPA:28661
@@ -65190,14 +66359,14 @@
UBERON:0001260
serosa of urinary bladder
-
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+
https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships
@@ -65486,7 +66655,7 @@
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@@ -65518,14 +66687,14 @@
pancreatic acinus
-
+
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FMA
@@ -65574,9 +66743,9 @@
-
-
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An endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones[GO].
@@ -65623,34 +66792,34 @@
https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.3/assets/3d-vh-m-pancreas.glb
https://upload.wikimedia.org/wikipedia/commons/7/7e/Blausen_0699_PancreasAnatomy2.png
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PMID:16417468
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Wikipedia
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Wikipedia
@@ -65715,7 +66884,7 @@
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A trabecula that is part of a spleen.
EMAPA:35808
@@ -65733,14 +66902,14 @@
trabecula of spleen
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FMA
@@ -65769,7 +66938,7 @@
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A structure found in the red pulp of the spleen between the sinusoids, consisting of fibrils and connective tissue cells with a large population of monocytes and macrophages. These cords contain half of the human body's monocytes as a reserve so that after tissue injury these monocytes can move in and aid locally sourced monocytes in wound healing. Erythrocytes pass through the cords of Billroth before entering the sinusoids. The passage into the sinusoids may be seen as a bottleneck, where erythrocytes need to be flexible in order to pass through. In disorders of erythrocyte shape and/or flexibility, such as hereditary spherocytosis, erythrocytes fail to pass through and get phagocytosed, causing extravascular hemolysis.
EMAPA:37752
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splenic cord
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MA
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The acetabulum is a concave surface of the pelvis. The head of the femur meets with the pelvis at the acetabulum, forming the hip joint. There are three bones of the os coxae (hip bone) that come together to form the acetabulum. Contributing a little more than two-fifths of the structure is the ischium, which provides lower and side boundaries to the acetabulum. The ilium forms the upper boundary, providing a little less than two-fifths of the structure of the acetabulum. The rest is formed by the pubis, near the midline. It is bounded by a prominent uneven rim, which is thick and strong above, and serves for the attachment of the acetabular labrum, which reduces its opening, and deepens the surface for formation of the hip joint. At the lower part of the acetabulum is the acetabular notch, which is continuous with a circular depression, the acetabular fossa, at the bottom of the cavity of the acetabulum. The rest of the acetabulum is formed by a curved, crescent-moon shaped surface, the lunate surface, where the joint is made with the head of the femur. Its counterpart in the pectoral girdle is the glenoid fossa.[WP,unvetted].
Cavity for the articulation of the proximal bone of the hind limb.[AAO]
During the transformation from the osteolepiform fins to tetrapod limbs, the appendages and girdles underwent a number of radical changes. The pelvic girdle became a weight-bearing structure by evolution of an ischium, a full mesio-ventral contact between the two sides of the girdle, an ilium, and a contact between the vertebral column and the girdle through a sacral rib. Fore- and hindlimbs shifted laterally by reorientation of the glenoid and the acetabulum.[well established][VHOG]
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acetabular part of hip bone
http://upload.wikimedia.org/wikipedia/commons/2/29/Illu_pelvic_girdle.jpg
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Phenoscape
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FMA
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innominate bone
http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png
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FMA
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