From 3981704524a859c8aa91183128d15c1b89e65afa Mon Sep 17 00:00:00 2001 From: aleixpuig <94959119+aleixpuigb@users.noreply.github.com> Date: Tue, 14 Jan 2025 14:11:02 +0000 Subject: [PATCH] Fixes #2892 NTR diffuse bipolar 4a and 4b cells Fixes #2892 NTR diffuse bipolar 4a and 4b cells The higly expressed genes are not added in logical axioms waiting for HCA feedback and NS-Forest markers. --- src/ontology/cl-edit.owl | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl index b60fcc0af..1bba56e91 100644 --- a/src/ontology/cl-edit.owl +++ b/src/ontology/cl-edit.owl @@ -3049,6 +3049,8 @@ Declaration(Class(obo:CL_4033091)) Declaration(Class(obo:CL_4033092)) Declaration(Class(obo:CL_4033093)) Declaration(Class(obo:CL_4033094)) +Declaration(Class(obo:CL_4033095)) +Declaration(Class(obo:CL_4033096)) Declaration(Class(obo:CL_4040000)) Declaration(Class(obo:CL_4040001)) Declaration(Class(obo:CL_4040002)) @@ -32427,6 +32429,26 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35798993") Annotation(ob AnnotationAssertion(rdfs:label obo:CL_4033094 "age-associated B cell") SubClassOf(obo:CL_4033094 obo:CL_0000787) +# Class: obo:CL_4033095 (diffuse bipolar 4a cell) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:31995762") Annotation(oboInOwl:hasDbXref "doi:10.1101/2023.11.07.566105") obo:IAO_0000115 obo:CL_4033095 "An ON bipolar cell that has high expression of DIRC3, KCNJ3, LINC01915, PTPRK compared with other bipolar cells.") +AnnotationAssertion(terms:contributor obo:CL_4033095 ) +AnnotationAssertion(terms:date obo:CL_4033095 "2025-01-14T13:48:42Z"^^xsd:dateTime) +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "doi:10.1101/2023.11.07.566105") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4033095 "DB4a") +AnnotationAssertion(rdfs:label obo:CL_4033095 "diffuse bipolar 4a cell") +SubClassOf(obo:CL_4033095 obo:CL_0000749) +SubClassOf(obo:CL_4033095 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_9606)) + +# Class: obo:CL_4033096 (diffuse bipolar 4b cell) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:31995762") Annotation(oboInOwl:hasDbXref "doi:10.1101/2023.11.07.566105") obo:IAO_0000115 obo:CL_4033096 "An ON bipolar cell that has high expression of NOS1AP compared with other bipolar cells.") +AnnotationAssertion(terms:contributor obo:CL_4033096 ) +AnnotationAssertion(terms:date obo:CL_4033096 "2025-01-14T13:49:08Z"^^xsd:dateTime) +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "doi:10.1101/2023.11.07.566105") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_4033096 "DB4b") +AnnotationAssertion(rdfs:label obo:CL_4033096 "diffuse bipolar 4b cell") +SubClassOf(obo:CL_4033096 obo:CL_0000749) +SubClassOf(obo:CL_4033096 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_9606)) + # Class: obo:CL_4040000 (glial restricted tripotential precursor cell) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:10719353") obo:IAO_0000115 obo:CL_4040000 "A glial precursor cell that generates oligodendrocytes and type-1 and type-2 astrocytes. It has been shown in some mammals that this cell type may express A2B5, nestin, FGFR-1, FGFR-2, FGFR-3, PLP, and DM-20 antigens. Unlike oligodendrocyte precursor cell, it does not initially express PDGFR-alpha and can differentiate into both type-1 and type-2 astrocytes.")