From a1737c80c6ada67ed31063adf7178fcefcec0d0a Mon Sep 17 00:00:00 2001 From: John SJ Anderson Date: Mon, 2 Dec 2024 11:25:24 -0800 Subject: [PATCH] Rename rule for copying NCBI example data for clarity [#23] --- ingest/build-configs/ci/copy_example_data.smk | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) diff --git a/ingest/build-configs/ci/copy_example_data.smk b/ingest/build-configs/ci/copy_example_data.smk index c013789..790b0c7 100644 --- a/ingest/build-configs/ci/copy_example_data.smk +++ b/ingest/build-configs/ci/copy_example_data.smk @@ -1,12 +1,11 @@ -rule copy_example_data: +rule copy_example_ncbi_data: input: ncbi_dataset="example-data/ncbi_dataset.zip" output: ncbi_dataset=temp("data/ncbi_dataset.zip") shell: - """ + r""" cp -f {input.ncbi_dataset} {output.ncbi_dataset} """ - # force this rule over NCBI data fetch -ruleorder: copy_example_data > fetch_ncbi_dataset_package +ruleorder: copy_example_ncbi_data > fetch_ncbi_dataset_package