From 30070f30e4f79bed99320f00b3a792738243fe03 Mon Sep 17 00:00:00 2001
From: Jennifer Chang <jennifer.chang.bioinform@gmail.com>
Date: Fri, 16 Feb 2024 11:16:58 -0800
Subject: [PATCH] Include a nextstrain-pathogen.yaml file at the top level of
 the pathogen

This is currently an empty file to indicate the top level pathogen repo.
The inclusion of this file allows the nextstrain build invocation to work
from any directory regardless of runtime.

This is necessary so that rules in "ingest" can access the the external
directory "nextclade_data".
---
 nextstrain-pathogen.yaml | 5 +++++
 1 file changed, 5 insertions(+)
 create mode 100644 nextstrain-pathogen.yaml

diff --git a/nextstrain-pathogen.yaml b/nextstrain-pathogen.yaml
new file mode 100644
index 00000000..b74c50d3
--- /dev/null
+++ b/nextstrain-pathogen.yaml
@@ -0,0 +1,5 @@
+# This is currently an empty file to indicate the top level pathogen repo.
+# The inclusion of this file allows the Nextstrain CLI to run the
+# `nextstrain build` from any directory regardless of runtime.
+#
+# See https://github.com/nextstrain/cli/releases/tag/8.2.0 for more details.