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Compare input mapping to output mapping after boomer run #4

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hrshdhgd opened this issue Jan 9, 2023 · 1 comment · May be fixed by #2
Open

Compare input mapping to output mapping after boomer run #4

hrshdhgd opened this issue Jan 9, 2023 · 1 comment · May be fixed by #2
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hrshdhgd commented Jan 9, 2023 •
edited by matentzn
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  1. Get the ofn file
  2. ROBOT convert to JSON
  3. sssom parse json-file
  4. Compare input SSSOM TSV to output SSSOM TSV. This should be done by a standard sssom diff command
@hrshdhgd hrshdhgd self-assigned this Jan 9, 2023
@hrshdhgd hrshdhgd linked a pull request Jan 9, 2023 that will close this issue
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@matentzn matentzn changed the title Post-boomer run tasks Compare input mapping to output mapping after boomer run Jan 23, 2023
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Closely related to monarch-initiative/monarch-mapping-commons#10

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Notebook experimenting with boomer runs monarch-initiative/boomer-examples
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