Qc fixes #401
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Qc fixes #401
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…sues(dac_qc_comment)
Improved or added Docstring to function, method, or class Used the logging module to log message at the error level Added a report to functions' returns to log in the error Used fill_value=np.int16(-999) for _FillValue for qartod variables. Using a flag value to _FillValue is not a good practice for quality control data. Add a full array of 2 as a default for qartod variables. There are instances where array cannot be qc tested because of errors in attributes values or there are insufficient data or the array is empty. Add a functionality to drop configuration specifications and skip QC if the specs cannot be calculated. This is for the function get_spike_thresholds and get_rate_of_change_threshold Changed the qartod method to calculate flags from XarrayStream to PandasStream to fix the array type compatability issues with the ioos-qc module. Added the values mask check and invalis data check to the time array.
added the suspect_span to the density gross_range_test
benjwadams
previously approved these changes
Dec 2, 2024
benjwadams
requested changes
Dec 2, 2024
minor fix to work with test_glider_qc.py
adjusted functions to match those of the reworked glider_qc.py
fixed glider_qc/glider_qc.py:140: NameError: name 'ncfile' is not defined line
fixed tests/test_glider_qc.py:119: NameError: name 'normalize_variable' is not defined fixed tests/test_glider_qc.py:75: KeyError: 'gross_range_test'
Fixed tests/test_glider_qc.py:73: NameError: name 'tempvar' is not defined
Fixed tests/test_glider_qc.py:84: KeyError: 'gross_range_test'
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Dec 19, 2024
The unit tests were checked and modified to work with the new updates/changes. |
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update of the glider_qc.py module and functions