diff --git a/README.md b/README.md index b31fdcb..c23b351 100755 --- a/README.md +++ b/README.md @@ -56,7 +56,7 @@ See below for information on usage and local installation. variant_file VCF or CSV file with a header (see COLUMN_IDS option). reference_file FASTA file containing a reference genome sequence. annotation_file gffutils database file. Can be generated using create_db.py. - output_file Prefix for output file. Will be a VCF/CSV if variant_file is VCF/CSV. + output_file Name of output file. optional arguments: -h, --help show this help message and exit